mm39_v1_chr7_+_134272395_134272445	0.17076903532369722	UUGGCAC	ENSMUST00000211593.2|Dock1|ENSMUSG00000058325.7|dedicator of cytokinesis 1	ENSMUST00000084488.5|Dock1|ENSMUSG00000058325.7|dedicator of cytokinesis 1
mm39_v1_chr9_-_43017249_43017322	0.15842186529961616	UUGGCAC	ENSMUST00000165665.9|Arhgef12|ENSMUSG00000059495.15|Rho guanine nucleotide exchange factor (GEF) 12
mm39_v1_chr11_-_97913420_97913496	0.15188182671434003	UUGGCAC	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr11_+_45946800_45946895	0.13190809184366617	UUGGCAC	ENSMUST00000011400.8|Adam19|ENSMUSG00000011256.17|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm39_v1_chr2_-_84481058_84481093	0.12302409958053219	UUGGCAC	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr11_+_87651359_87651413	0.11844174768617767	UUGGCAC	ENSMUST00000039627.12|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1	ENSMUST00000100644.10|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1
mm39_v1_chr6_-_127128007_127128023	0.10257193955668653	UUGGCAC	ENSMUST00000000188.12|Ccnd2|ENSMUSG00000000184.13|cyclin D2
mm39_v1_chr15_-_98505508_98505519	0.10004195692590098	UUGGCAC	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr2_-_156921135_156921196	0.0996680484240702	UUGGCAC	ENSMUST00000069098.7|Soga1|ENSMUSG00000055485.7|suppressor of glucose, autophagy associated 1
mm39_v1_chr1_-_96799832_96799905	0.09456532570699169	UUGGCAC	ENSMUST00000071985.6|Slco4c1|ENSMUSG00000040693.8|solute carrier organic anion transporter family, member 4C1
mm39_v1_chr8_+_27575611_27575626	0.08925185387322239	UUGGCAC	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr10_-_84276454_84276468	0.08807898665693895	UUGGCAC	ENSMUST00000020220.15|Nuak1|ENSMUSG00000020032.15|NUAK family, SNF1-like kinase, 1
mm39_v1_chr14_+_121272950_121272990	0.08760905637237759	UUGGCAC	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chrX_+_100683662_100683714	0.08418870388107133	UUGGCAC	ENSMUST00000119299.8|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	ENSMUST00000044475.5|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm39_v1_chr7_-_136916123_136916174	0.0762953747913788	UUGGCAC	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chrX_+_71006577_71006619	0.075838879028308	UUGGCAC	ENSMUST00000048790.7|Prrg3|ENSMUSG00000033361.14|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm39_v1_chr19_-_42741148_42741214	0.07252353261186886	UUGGCAC	ENSMUST00000236659.2|Pyroxd2|ENSMUSG00000060224.5|pyridine nucleotide-disulphide oxidoreductase domain 2	ENSMUST00000076505.4|Pyroxd2|ENSMUSG00000060224.5|pyridine nucleotide-disulphide oxidoreductase domain 2
mm39_v1_chr14_-_45895599_45895640	0.07097486558822545	UUGGCAC	ENSMUST00000111828.4|Ddhd1|ENSMUSG00000037697.20|DDHD domain containing 1	ENSMUST00000051310.13|Ddhd1|ENSMUSG00000037697.20|DDHD domain containing 1
mm39_v1_chrX_+_102400061_102400094	0.07090930911815631	UUGGCAC	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr2_-_24653059_24653164	0.07088050585490416	UUGGCAC	ENSMUST00000100348.10|Cacna1b|ENSMUSG00000004113.19|calcium channel, voltage-dependent, N type, alpha 1B subunit	ENSMUST00000041342.12|Cacna1b|ENSMUSG00000004113.19|calcium channel, voltage-dependent, N type, alpha 1B subunit	ENSMUST00000114447.8|Cacna1b|ENSMUSG00000004113.19|calcium channel, voltage-dependent, N type, alpha 1B subunit	ENSMUST00000102939.9|Cacna1b|ENSMUSG00000004113.19|calcium channel, voltage-dependent, N type, alpha 1B subunit	ENSMUST00000070864.14|Cacna1b|ENSMUSG00000004113.19|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm39_v1_chr4_-_141412910_141412910	0.06713897084679485	UUGGCAC	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr3_-_95125002_95125038	0.06466494725839846	UUGGCAC	ENSMUST00000107209.8|Gabpb2|ENSMUSG00000038766.17|GA repeat binding protein, beta 2
mm39_v1_chr8_+_36054919_36054981	0.06432944615191159	UUGGCAC	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr5_+_32293145_32293201	0.06432096563528794	UUGGCAC	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr4_-_34687381_34687453	0.06423978127639668	UUGGCAC	ENSMUST00000029970.14|Slc35a1|ENSMUSG00000028293.15|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm39_v1_chr4_-_57143437_57143626	0.06221787523995886	UUGGCAC	ENSMUST00000095076.10|Epb41l4b|ENSMUSG00000028434.13|erythrocyte membrane protein band 4.1 like 4b	ENSMUST00000030142.4|Epb41l4b|ENSMUSG00000028434.13|erythrocyte membrane protein band 4.1 like 4b
mm39_v1_chr1_+_87683592_87683839	0.06216888706462906	UUGGCAC	ENSMUST00000144047.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000027512.13|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113186.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113190.3|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)
mm39_v1_chr15_-_103148239_103148297	0.061642672819021756	UUGGCAC	ENSMUST00000118152.8|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr2_+_22512195_22512217	0.06099003323897275	UUGGCAC	ENSMUST00000028123.4|Gad2|ENSMUSG00000026787.4|glutamic acid decarboxylase 2
mm39_v1_chr14_-_103584179_103584277	0.060024591391171896	UUGGCAC	ENSMUST00000159855.8|Mycbp2|ENSMUSG00000033004.17|MYC binding protein 2, E3 ubiquitin protein ligase
mm39_v1_chr12_-_16850674_16850711	0.059801738219158324	UUGGCAC	ENSMUST00000162112.8|Greb1|ENSMUSG00000036523.17|gene regulated by estrogen in breast cancer protein
mm39_v1_chr8_-_87611849_87611935	0.059202058948018874	UUGGCAC	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr1_-_133728779_133728805	0.05690662523662109	UUGGCAC	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr1_-_79649683_79649711	0.056572261993187815	UUGGCAC	ENSMUST00000162342.8|Ap1s3|ENSMUSG00000054702.15|adaptor-related protein complex AP-1, sigma 3
mm39_v1_chr4_+_45342069_45342128	0.056011789256170806	UUGGCAC	ENSMUST00000155551.8|Dcaf10|ENSMUSG00000035572.17|DDB1 and CUL4 associated factor 10
mm39_v1_chr7_+_43959637_43959677	0.05407826086523065	UUGGCAC	ENSMUST00000107938.8|Shank1|ENSMUSG00000038738.16|SH3 and multiple ankyrin repeat domains 1
mm39_v1_chr16_+_14523696_14523722	0.053598079402191724	UUGGCAC	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr2_+_31649946_31650001	0.053546377792591686	UUGGCAC	ENSMUST00000028190.13|Abl1|ENSMUSG00000026842.17|c-abl oncogene 1, non-receptor tyrosine kinase
mm39_v1_chr8_-_125390107_125390122	0.053244305132957616	UUGGCAC	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chr2_-_152256947_152256947	0.05291811634378505	UUGGCAC	ENSMUST00000099207.5|Zcchc3|ENSMUSG00000074682.5|zinc finger, CCHC domain containing 3
mm39_v1_chr4_+_59805829_59805914	0.051766553110984645	UUGGCAC	ENSMUST00000030080.7|Snx30|ENSMUSG00000028385.15|sorting nexin family member 30
mm39_v1_chr8_-_105169621_105169679	0.0513020808279231	UUGGCAC	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr17_-_32074754_32074780	0.05119534900652106	UUGGCAC	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr4_-_141450710_141450747	0.05114656244036365	UUGGCAC	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chr18_+_68066328_68066378	0.05023438061966405	UUGGCAC	ENSMUST00000063775.5|Ldlrad4|ENSMUSG00000024544.10|low density lipoprotein receptor class A domain containing 4
mm39_v1_chr6_+_108190050_108190065	0.04951313113112288	UUGGCAC	ENSMUST00000032192.9|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chr5_+_93241287_93241310	0.04898805328124407	UUGGCAC	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr11_+_75422516_75422569	0.048955462663006134	UUGGCAC	ENSMUST00000149727.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000108433.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000042561.14|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000143035.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2
mm39_v1_chr11_+_94881861_94881916	0.04892770544879594	UUGGCAC	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chr4_-_136563154_136563299	0.04884844956978699	UUGGCAC	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr18_+_5591864_5591902	0.048825973689843434	UUGGCAC	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr1_+_127132712_127132788	0.047787779367992514	UUGGCAC	ENSMUST00000038361.11|Mgat5|ENSMUSG00000036155.14|mannoside acetylglucosaminyltransferase 5
mm39_v1_chr16_+_16714333_16714462	0.04634486822656521	UUGGCAC	ENSMUST00000027373.12|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)	ENSMUST00000232247.2|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)
mm39_v1_chr6_+_140568366_140568389	0.04613389242848446	UUGGCAC	ENSMUST00000032359.15|Aebp2|ENSMUSG00000030232.19|AE binding protein 2
mm39_v1_chr10_+_115220826_115220927	0.04580490891970961	UUGGCAC	ENSMUST00000036044.9|Zfc3h1|ENSMUSG00000034163.11|zinc finger, C3H1-type containing
mm39_v1_chr11_+_121150798_121150881	0.045462378119658975	UUGGCAC	ENSMUST00000106113.2|Foxk2|ENSMUSG00000039275.10|forkhead box K2
mm39_v1_chr8_-_64659004_64659045	0.043922485164852476	UUGGCAC	ENSMUST00000066166.6|Tll1|ENSMUSG00000053626.6|tolloid-like
mm39_v1_chr17_-_28039588_28039662	0.043125765228253975	UUGGCAC	ENSMUST00000114863.10|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains	ENSMUST00000233131.2|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains
mm39_v1_chr1_-_132953068_132953154	0.04231221368926561	UUGGCAC	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr19_+_44919585_44919613	0.04228686308580693	UUGGCAC	ENSMUST00000096053.5|Slf2|ENSMUSG00000036097.9|SMC5-SMC6 complex localization factor 2
mm39_v1_chr4_-_141265745_141265838	0.04159459562480954	UUGGCAC	ENSMUST00000078886.10|Spen|ENSMUSG00000040761.17|spen family transcription repressor
mm39_v1_chr13_-_110416637_110416747	0.041384324669426306	UUGGCAC	ENSMUST00000167824.3|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family	ENSMUST00000224180.2|Rab3c|ENSMUSG00000021700.11|RAB3C, member RAS oncogene family
mm39_v1_chr12_+_76450941_76451038	0.04107280477413458	UUGGCAC	ENSMUST00000080449.7|Hspa2|ENSMUSG00000059970.8|heat shock protein 2
mm39_v1_chr14_-_75991903_75992003	0.04080988959251675	UUGGCAC	ENSMUST00000049168.9|Cog3|ENSMUSG00000034893.10|component of oligomeric golgi complex 3
mm39_v1_chr13_+_97061182_97061205	0.040690496266773506	UUGGCAC	ENSMUST00000171324.3|Gcnt4|ENSMUSG00000091387.3|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm39_v1_chr18_+_34891941_34891959	0.04027268862377579	UUGGCAC	ENSMUST00000049281.12|Fam53c|ENSMUSG00000034300.18|family with sequence similarity 53, member C
mm39_v1_chr10_+_39245746_39245808	0.03948678494246715	UUGGCAC	ENSMUST00000063091.13|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000099967.10|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000126486.8|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene
mm39_v1_chr14_+_34542053_34542108	0.039078351934242105	UUGGCAC	ENSMUST00000043349.7|Grid1|ENSMUSG00000041078.8|glutamate receptor, ionotropic, delta 1
mm39_v1_chr17_+_29020064_29020108	0.03866120285681382	UUGGCAC	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr19_+_60744385_60744432	0.03863817096262854	UUGGCAC	ENSMUST00000088237.6|Nanos1|ENSMUSG00000072437.5|nanos C2HC-type zinc finger 1
mm39_v1_chr1_-_106641940_106642062	0.03812877047970107	UUGGCAC	ENSMUST00000112751.2|Bcl2|ENSMUSG00000057329.8|B cell leukemia/lymphoma 2
mm39_v1_chr5_-_67585137_67585157	0.037883214670978264	UUGGCAC	ENSMUST00000169190.5|Bend4|ENSMUSG00000092060.5|BEN domain containing 4
mm39_v1_chr4_-_126323291_126323349	0.037154836448501545	UUGGCAC	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr4_-_6990774_6990823	0.03680969938253801	UUGGCAC	ENSMUST00000039987.4|Tox|ENSMUSG00000041272.12|thymocyte selection-associated high mobility group box
mm39_v1_chr13_-_34529157_34529257	0.036165278165900636	UUGGCAC	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr9_-_119151428_119151517	0.03609469452731182	UUGGCAC	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr15_+_86098660_86098673	0.03596212477516747	UUGGCAC	ENSMUST00000063414.9|Tbc1d22a|ENSMUSG00000051864.11|TBC1 domain family, member 22a
mm39_v1_chr8_-_70664901_70664959	0.03581568314388051	UUGGCAC	ENSMUST00000063788.8|Slc25a42|ENSMUSG00000002346.17|solute carrier family 25, member 42	ENSMUST00000110127.8|Slc25a42|ENSMUSG00000002346.17|solute carrier family 25, member 42
mm39_v1_chr10_+_52293617_52293677	0.03575468463303353	UUGGCAC	ENSMUST00000023830.16|Nus1|ENSMUSG00000023068.17|NUS1 dehydrodolichyl diphosphate synthase subunit
mm39_v1_chr1_+_16175998_16176095	0.03570868157396754	UUGGCAC	ENSMUST00000027053.8|Rdh10|ENSMUSG00000025921.8|retinol dehydrogenase 10 (all-trans)
mm39_v1_chrX_-_139443926_139443944	0.035541353180836184	UUGGCAC	ENSMUST00000055738.12|Tsc22d3|ENSMUSG00000031431.14|TSC22 domain family, member 3
mm39_v1_chr11_+_115310963_115311008	0.03543710612195552	UUGGCAC	ENSMUST00000106533.8|Kctd2|ENSMUSG00000016940.19|potassium channel tetramerisation domain containing 2	ENSMUST00000123345.2|Kctd2|ENSMUSG00000016940.19|potassium channel tetramerisation domain containing 2
mm39_v1_chr15_-_58953838_58953867	0.03447732976577833	UUGGCAC	ENSMUST00000080371.8|Mtss1|ENSMUSG00000022353.11|MTSS I-BAR domain containing 1
mm39_v1_chr1_+_139349912_139350120	0.03438579539460564	UUGGCAC	ENSMUST00000200243.5|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41	ENSMUST00000039867.10|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41
mm39_v1_chr8_+_117884711_117884876	0.033450346233730346	UUGGCAC	ENSMUST00000064488.11|Gan|ENSMUSG00000052557.12|giant axonal neuropathy	ENSMUST00000162997.3|Gan|ENSMUSG00000052557.12|giant axonal neuropathy
mm39_v1_chr12_-_35584968_35585059	0.03320949154030977	UUGGCAC	ENSMUST00000116436.9|Ahr|ENSMUSG00000019256.18|aryl-hydrocarbon receptor
mm39_v1_chr11_-_8614497_8614594	0.033140428983613746	UUGGCAC	ENSMUST00000020695.13|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr9_-_50639230_50639308	0.03300858255182964	UUGGCAC	ENSMUST00000118707.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000034566.15|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr6_+_100810566_100810624	0.03294593724175826	UUGGCAC	ENSMUST00000063854.7|Ppp4r2|ENSMUSG00000052144.9|protein phosphatase 4, regulatory subunit 2
mm39_v1_chr15_+_12205095_12205124	0.03285469074236202	UUGGCAC	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr2_+_90770742_90770888	0.03232883101437771	UUGGCAC	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr10_+_80972089_80972105	0.03141516575946533	UUGGCAC	ENSMUST00000048128.15|Zbtb7a|ENSMUSG00000035011.16|zinc finger and BTB domain containing 7a
mm39_v1_chr5_+_88868714_88868734	0.031037694616196744	UUGGCAC	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr10_+_74896383_74896461	0.030601001806773893	UUGGCAC	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr13_-_96269076_96269136	0.02978700423022663	UUGGCAC	ENSMUST00000161263.8|Sv2c|ENSMUSG00000051111.17|synaptic vesicle glycoprotein 2c
mm39_v1_chr3_+_101917455_101917487	0.029527034795141644	UUGGCAC	ENSMUST00000066187.6|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2	ENSMUST00000198675.2|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2
mm39_v1_chr12_+_76417040_76417040	0.029459744503137927	UUGGCAC	ENSMUST00000042779.4|Zbtb1|ENSMUSG00000033454.7|zinc finger and BTB domain containing 1
mm39_v1_chr11_+_32592707_32592875	0.029414188533795925	UUGGCAC	ENSMUST00000109366.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000093205.13|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000076383.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11
mm39_v1_chr2_+_127112127_127112191	0.02931911648193871	UUGGCAC	ENSMUST00000110375.9|Stard7|ENSMUSG00000027367.17|START domain containing 7
mm39_v1_chr10_+_29189496_29189590	0.0288008067665832	UUGGCAC	ENSMUST00000020034.6|Echdc1|ENSMUSG00000019883.12|enoyl Coenzyme A hydratase domain containing 1
mm39_v1_chr1_-_97589675_97589799	0.028655236946769334	UUGGCAC	ENSMUST00000053033.14|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator	ENSMUST00000149927.2|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator
mm39_v1_chr7_-_34089109_34089120	0.028517840937520498	UUGGCAC	ENSMUST00000085585.12|Lsm14a|ENSMUSG00000066568.13|LSM14A mRNA processing body assembly factor
mm39_v1_chr5_-_114046746_114046819	0.028166751583821096	UUGGCAC	ENSMUST00000004646.13|Coro1c|ENSMUSG00000004530.13|coronin, actin binding protein 1C
mm39_v1_chr2_-_91067212_91067266	0.02815338585551626	UUGGCAC	ENSMUST00000111352.8|Ddb2|ENSMUSG00000002109.15|damage specific DNA binding protein 2
mm39_v1_chr9_+_106048116_106048153	0.02784004981633502	UUGGCAC	ENSMUST00000020490.13|Wdr82|ENSMUSG00000020257.14|WD repeat domain containing 82
mm39_v1_chr1_+_61677977_61678000	0.02779738743500216	UUGGCAC	ENSMUST00000075374.10|Pard3b|ENSMUSG00000052062.15|par-3 family cell polarity regulator beta
mm39_v1_chr10_+_86614864_86614873	0.027670439157103724	UUGGCAC	ENSMUST00000099396.3|Nt5dc3|ENSMUSG00000054027.9|5'-nucleotidase domain containing 3
mm39_v1_chrX_+_55391749_55391775	0.027648613964461926	UUGGCAC	ENSMUST00000101560.4|Zfp449|ENSMUSG00000073176.5|zinc finger protein 449
mm39_v1_chr12_+_55883101_55883146	0.027568501625466337	UUGGCAC	ENSMUST00000059250.8|Brms1l|ENSMUSG00000012076.9|breast cancer metastasis-suppressor 1-like
mm39_v1_chrX_+_100298134_100298186	0.02755317510027271	UUGGCAC	ENSMUST00000062000.6|Foxo4|ENSMUSG00000042903.9|forkhead box O4
mm39_v1_chr10_+_128212953_128213024	0.02743572145090883	UUGGCAC	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr18_+_36414122_36414204	0.026869879830631504	UUGGCAC	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chrX_+_7750261_7750294	0.02660825372852259	UUGGCAC	ENSMUST00000115660.12|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2
mm39_v1_chr2_-_179618439_179618458	0.02657565728883414	UUGGCAC	ENSMUST00000041618.13|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4	ENSMUST00000227325.2|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4
mm39_v1_chr1_-_136273811_136273884	0.026521563802819656	UUGGCAC	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr13_+_54722823_54722828	0.02636007658906558	UUGGCAC	ENSMUST00000026988.11|Arl10|ENSMUSG00000025870.11|ADP-ribosylation factor-like 10
mm39_v1_chr13_+_49495025_49495099	0.02613599489470964	UUGGCAC	ENSMUST00000048544.14|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110084.4|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110085.11|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2
mm39_v1_chr11_+_97253221_97253377	0.026124542395819406	UUGGCAC	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr16_-_17709457_17709564	0.02611755947167422	UUGGCAC	ENSMUST00000117082.2|Dgcr2|ENSMUSG00000003166.21|DiGeorge syndrome critical region gene 2	ENSMUST00000066127.13|Dgcr2|ENSMUSG00000003166.21|DiGeorge syndrome critical region gene 2	ENSMUST00000117945.8|Dgcr2|ENSMUSG00000003166.21|DiGeorge syndrome critical region gene 2	ENSMUST00000012152.13|Dgcr2|ENSMUSG00000003166.21|DiGeorge syndrome critical region gene 2
mm39_v1_chr15_-_25413838_25413863	0.02602266200943057	UUGGCAC	ENSMUST00000058845.9|Basp1|ENSMUSG00000045763.9|brain abundant, membrane attached signal protein 1
mm39_v1_chr18_+_50186349_50186472	0.02598654036212746	UUGGCAC	ENSMUST00000148159.3|Tnfaip8|ENSMUSG00000062210.14|tumor necrosis factor, alpha-induced protein 8
mm39_v1_chr5_-_64126194_64126247	0.025946694088959586	UUGGCAC	ENSMUST00000154169.4|Rell1|ENSMUSG00000047881.15|RELT-like 1
mm39_v1_chr6_+_17065141_17065223	0.025889306231554516	UUGGCAC	ENSMUST00000115467.11|Tes|ENSMUSG00000029552.20|testin LIM domain protein	ENSMUST00000154266.3|Tes|ENSMUSG00000029552.20|testin LIM domain protein	ENSMUST00000076654.9|Tes|ENSMUSG00000029552.20|testin LIM domain protein
mm39_v1_chr6_-_113478779_113478910	0.025831397501898508	UUGGCAC	ENSMUST00000101059.4|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204268.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205170.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205075.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204134.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3
mm39_v1_chr7_-_101714251_101714366	0.025730980179182898	UUGGCAC	ENSMUST00000130074.2|Rnf121|ENSMUSG00000070426.13|ring finger protein 121	ENSMUST00000131104.3|Rnf121|ENSMUSG00000070426.13|ring finger protein 121	ENSMUST00000096639.12|Rnf121|ENSMUSG00000070426.13|ring finger protein 121
mm39_v1_chr19_+_16110176_16110285	0.025722998768275853	UUGGCAC	ENSMUST00000025541.6|Gnaq|ENSMUSG00000024639.6|guanine nucleotide binding protein, alpha q polypeptide
mm39_v1_chr11_-_70111796_70111890	0.025168426622402963	UUGGCAC	ENSMUST00000060010.3|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000190533.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr15_-_53765869_53765926	0.025080937358393184	UUGGCAC	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr11_+_79230618_79230719	0.024759356960506376	UUGGCAC	ENSMUST00000219057.2|Nf1|ENSMUSG00000020716.17|neurofibromin 1	ENSMUST00000108251.9|Nf1|ENSMUSG00000020716.17|neurofibromin 1	ENSMUST00000071325.9|Nf1|ENSMUSG00000020716.17|neurofibromin 1
mm39_v1_chr4_-_155430153_155430266	0.024660157451327915	UUGGCAC	ENSMUST00000103178.11|Prkcz|ENSMUSG00000029053.17|protein kinase C, zeta
mm39_v1_chr17_+_44499451_44499484	0.02460073684094534	UUGGCAC	ENSMUST00000024755.7|Clic5|ENSMUSG00000023959.11|chloride intracellular channel 5
mm39_v1_chr12_+_71062733_71062837	0.024568394433149527	UUGGCAC	ENSMUST00000046305.12|Arid4a|ENSMUSG00000048118.18|AT rich interactive domain 4A (RBP1-like)
mm39_v1_chr11_-_103303480_103303537	0.024369234279467498	UUGGCAC	ENSMUST00000041272.10|Plekhm1|ENSMUSG00000034247.10|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm39_v1_chr13_+_31809774_31809799	0.024145423403668514	UUGGCAC	ENSMUST00000042054.3|Foxf2|ENSMUSG00000038402.3|forkhead box F2
mm39_v1_chrX_+_36390430_36390455	0.02390635035620392	UUGGCAC	ENSMUST00000016553.5|Nkap|ENSMUSG00000016409.5|NFKB activating protein
mm39_v1_chr5_-_140634773_140634807	0.023897340834720143	UUGGCAC	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr3_+_103009920_103010030	0.023255249645105183	UUGGCAC	ENSMUST00000173206.8|Dennd2c|ENSMUSG00000007379.16|DENN/MADD domain containing 2C
mm39_v1_chr19_+_40819682_40819757	0.022950708284925254	UUGGCAC	ENSMUST00000025983.13|Ccnj|ENSMUSG00000025010.15|cyclin J	ENSMUST00000119316.2|Ccnj|ENSMUSG00000025010.15|cyclin J
mm39_v1_chr7_+_112278520_112278532	0.022824853130793295	UUGGCAC	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr9_-_62719208_62719229	0.022685308506205596	UUGGCAC	ENSMUST00000034775.10|Fem1b|ENSMUSG00000032244.10|fem 1 homolog b
mm39_v1_chr9_-_81515865_81515892	0.02257095680982927	UUGGCAC	ENSMUST00000183482.2|Htr1b|ENSMUSG00000049511.6|5-hydroxytryptamine (serotonin) receptor 1B
mm39_v1_chr4_-_132237804_132237820	0.022347922062627607	UUGGCAC	ENSMUST00000030724.9|Sesn2|ENSMUSG00000028893.9|sestrin 2
mm39_v1_chr3_-_9069745_9069809	0.022306274433815592	UUGGCAC	ENSMUST00000120143.8|Tpd52|ENSMUSG00000027506.16|tumor protein D52
mm39_v1_chr7_+_141055135_141055153	0.022279025892855915	UUGGCAC	ENSMUST00000026585.14|Tspan4|ENSMUSG00000025511.16|tetraspanin 4
mm39_v1_chr2_+_92430043_92430069	0.022052965110590714	UUGGCAC	ENSMUST00000065797.7|Chst1|ENSMUSG00000027221.6|carbohydrate sulfotransferase 1
mm39_v1_chr12_+_83997382_83997477	0.021977658767860363	UUGGCAC	ENSMUST00000053744.9|Riox1|ENSMUSG00000046791.9|ribosomal oxygenase 1
mm39_v1_chr10_+_79762858_79762973	0.02136718288122594	UUGGCAC	ENSMUST00000019708.12|Arid3a|ENSMUSG00000019564.13|AT rich interactive domain 3A (BRIGHT-like)	ENSMUST00000105377.8|Arid3a|ENSMUSG00000019564.13|AT rich interactive domain 3A (BRIGHT-like)
mm39_v1_chr12_+_81906738_81906814	0.021221932612981078	UUGGCAC	ENSMUST00000221721.2|Pcnx|ENSMUSG00000021140.10|pecanex homolog	ENSMUST00000021567.6|Pcnx|ENSMUSG00000021140.10|pecanex homolog
mm39_v1_chr4_-_45408646_45408768	0.02115894059572557	UUGGCAC	ENSMUST00000153904.2|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000132815.3|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000107796.8|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51	ENSMUST00000116341.4|Slc25a51|ENSMUSG00000045973.19|solute carrier family 25, member 51
mm39_v1_chr10_-_110845860_110845927	0.021104241772932863	UUGGCAC	ENSMUST00000041723.15|Zdhhc17|ENSMUSG00000035798.15|zinc finger, DHHC domain containing 17
mm39_v1_chr15_-_28025920_28025970	0.02093537585282356	UUGGCAC	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr10_+_80330669_80330714	0.020901914221029952	UUGGCAC	ENSMUST00000051773.9|Onecut3|ENSMUSG00000045518.9|one cut domain, family member 3
mm39_v1_chr9_+_56902172_56902207	0.02088113241922978	UUGGCAC	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr15_-_43733389_43733456	0.02075600908764959	UUGGCAC	ENSMUST00000067469.6|Tmem74|ENSMUSG00000054409.6|transmembrane protein 74
mm39_v1_chr14_-_105414294_105414361	0.0206400028995775	UUGGCAC	ENSMUST00000163545.8|Rbm26|ENSMUSG00000022119.16|RNA binding motif protein 26
mm39_v1_chr7_+_122723365_122723446	0.020590719586317068	UUGGCAC	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr8_+_105951777_105951827	0.02008846051354999	UUGGCAC	ENSMUST00000034361.10|D230025D16Rik|ENSMUSG00000031889.10|RIKEN cDNA D230025D16 gene
mm39_v1_chr15_+_54975713_54975799	0.020056489196276974	UUGGCAC	ENSMUST00000096433.10|Deptor|ENSMUSG00000022419.17|DEP domain containing MTOR-interacting protein
mm39_v1_chr18_+_69478790_69478882	0.02001552241458405	UUGGCAC	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr13_+_119565424_119565498	0.019979100955710698	UUGGCAC	ENSMUST00000026520.14|Paip1|ENSMUSG00000025451.16|polyadenylate binding protein-interacting protein 1
mm39_v1_chr5_+_147367237_147367355	0.019954927238087505	UUGGCAC	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr3_-_53370621_53370753	0.019825070728479402	UUGGCAC	ENSMUST00000056749.14|Nhlrc3|ENSMUSG00000042997.14|NHL repeat containing 3
mm39_v1_chr17_-_57242413_57242504	0.019804020596286494	UUGGCAC	ENSMUST00000025053.10|Mllt1|ENSMUSG00000024212.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
mm39_v1_chr12_-_85143852_85143865	0.01904609271191842	UUGGCAC	ENSMUST00000177289.9|Prox2|ENSMUSG00000042320.18|prospero homeobox 2
mm39_v1_chr12_-_31763859_31763946	0.018870963583954327	UUGGCAC	ENSMUST00000057783.6|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000236002.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000174480.3|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000176710.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22
mm39_v1_chr3_+_61269059_61269059	0.01883493982631536	UUGGCAC	ENSMUST00000049064.4|Rap2b|ENSMUSG00000036894.4|RAP2B, member of RAS oncogene family
mm39_v1_chr5_+_34153328_34153375	0.01881509624176637	UUGGCAC	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr1_-_171854818_171854880	0.018763280241569213	UUGGCAC	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr1_-_135358228_135358244	0.018712774919222838	UUGGCAC	ENSMUST00000041023.14|Ipo9|ENSMUSG00000041879.14|importin 9
mm39_v1_chr15_+_37233280_37233318	0.018650727306412093	UUGGCAC	ENSMUST00000161405.8|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2	ENSMUST00000022895.15|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2	ENSMUST00000161532.2|Grhl2|ENSMUSG00000022286.17|grainyhead like transcription factor 2
mm39_v1_chr7_+_126549692_126549756	0.018596858683252393	UUGGCAC	ENSMUST00000106335.8|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2	ENSMUST00000146017.3|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2
mm39_v1_chr13_-_101904662_101904725	0.01856508747634502	UUGGCAC	ENSMUST00000055518.13|Pik3r1|ENSMUSG00000041417.16|phosphoinositide-3-kinase regulatory subunit 1
mm39_v1_chr18_-_46658957_46659078	0.01851437932482077	UUGGCAC	ENSMUST00000036226.6|Fem1c|ENSMUSG00000033319.6|fem 1 homolog c
mm39_v1_chr15_+_25843225_25843275	0.018433149194524365	UUGGCAC	ENSMUST00000022881.15|Retreg1|ENSMUSG00000022270.17|reticulophagy regulator 1
mm39_v1_chr11_-_120882131_120882165	0.018427634991088328	UUGGCAC	ENSMUST00000239115.2|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta	ENSMUST00000018274.10|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta
mm39_v1_chr11_-_98084086_98084132	0.018293627999208244	UUGGCAC	ENSMUST00000092735.12|Med1|ENSMUSG00000018160.16|mediator complex subunit 1	ENSMUST00000107545.9|Med1|ENSMUSG00000018160.16|mediator complex subunit 1
mm39_v1_chr12_-_34578842_34578903	0.01825359393078745	UUGGCAC	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chrX_-_63320543_63320608	0.018247892806837897	UUGGCAC	ENSMUST00000114679.2|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4	ENSMUST00000069926.14|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4
mm39_v1_chr7_+_100355798_100355909	0.01820453224318826	UUGGCAC	ENSMUST00000107042.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000207564.2|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000049053.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A
mm39_v1_chr1_+_143516402_143516488	0.018178470846689946	UUGGCAC	ENSMUST00000038252.4|B3galt2|ENSMUSG00000033849.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm39_v1_chr17_+_69463786_69463845	0.018083433660419822	UUGGCAC	ENSMUST00000112680.8|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000080208.7|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000225977.2|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3
mm39_v1_chr7_+_138968988_138969077	0.01788222579039741	UUGGCAC	ENSMUST00000106098.8|Inpp5a|ENSMUSG00000025477.15|inositol polyphosphate-5-phosphatase A	ENSMUST00000026550.14|Inpp5a|ENSMUSG00000025477.15|inositol polyphosphate-5-phosphatase A
mm39_v1_chr2_-_90900628_90900762	0.017860272090068102	UUGGCAC	ENSMUST00000111436.3|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13	ENSMUST00000073575.12|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13
mm39_v1_chr1_-_75168567_75168641	0.017732242630964783	UUGGCAC	ENSMUST00000040689.15|Atg9a|ENSMUSG00000033124.17|autophagy related 9A	ENSMUST00000189702.7|Atg9a|ENSMUSG00000033124.17|autophagy related 9A
mm39_v1_chr5_+_135216090_135216126	0.017463173146147638	UUGGCAC	ENSMUST00000002825.6|Baz1b|ENSMUSG00000002748.8|bromodomain adjacent to zinc finger domain, 1B
mm39_v1_chr9_-_123680927_123680974	0.017226099287187248	UUGGCAC	ENSMUST00000184082.3|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1	ENSMUST00000167595.9|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1
mm39_v1_chr15_+_58761057_58761080	0.017190671644968958	UUGGCAC	ENSMUST00000036904.7|Rnf139|ENSMUSG00000037075.8|ring finger protein 139
mm39_v1_chr4_+_140427799_140427855	0.017132835467284238	UUGGCAC	ENSMUST00000071169.9|Rcc2|ENSMUSG00000040945.14|regulator of chromosome condensation 2
mm39_v1_chr2_+_155223728_155223804	0.017097183069902936	UUGGCAC	ENSMUST00000043237.14|Trp53inp2|ENSMUSG00000038375.16|transformation related protein 53 inducible nuclear protein 2	ENSMUST00000174685.8|Trp53inp2|ENSMUSG00000038375.16|transformation related protein 53 inducible nuclear protein 2
mm39_v1_chr7_-_4504635_4504711	0.017016900069716043	UUGGCAC	ENSMUST00000013886.9|Ppp1r12c|ENSMUSG00000019254.17|protein phosphatase 1, regulatory subunit 12C
mm39_v1_chr11_+_31822211_31822263	0.016979269134859736	UUGGCAC	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr11_-_116545071_116545151	0.016738228393488982	UUGGCAC	ENSMUST00000021166.6|Cygb|ENSMUSG00000020810.6|cytoglobin
mm39_v1_chr6_-_90787100_90787142	0.016640315252518075	UUGGCAC	ENSMUST00000101151.10|Iqsec1|ENSMUSG00000034312.16|IQ motif and Sec7 domain 1
mm39_v1_chr10_-_61288437_61288589	0.016509538945629853	UUGGCAC	ENSMUST00000167087.2|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2	ENSMUST00000020288.15|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2
mm39_v1_chr2_-_84508385_84508462	0.01620651834671666	UUGGCAC	ENSMUST00000189772.2|Gm28635|ENSMUSG00000101645.2|predicted gene 28635	ENSMUST00000053664.9|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2	ENSMUST00000111664.8|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2
mm39_v1_chr8_+_4216556_4216739	0.0161513632416734	UUGGCAC	ENSMUST00000239400.2|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000177053.8|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176149.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176072.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176825.3|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like
mm39_v1_chr9_+_72714156_72714156	0.0161027659249788	UUGGCAC	ENSMUST00000055535.9|Prtg|ENSMUSG00000036030.10|protogenin
mm39_v1_chr13_-_23553327_23553387	0.01593198347014475	UUGGCAC	ENSMUST00000125328.2|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A	ENSMUST00000145451.8|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A	ENSMUST00000050101.9|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A
mm39_v1_chr3_+_34074048_34074092	0.01589556801483685	UUGGCAC	ENSMUST00000001620.13|Fxr1|ENSMUSG00000027680.16|fragile X mental retardation gene 1, autosomal homolog
mm39_v1_chr6_+_120813199_120813218	0.01588337321676492	UUGGCAC	ENSMUST00000009256.4|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)
mm39_v1_chr11_+_57409484_57409521	0.015835492616058766	UUGGCAC	ENSMUST00000108849.8|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3	ENSMUST00000020830.14|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3
mm39_v1_chr6_+_17307639_17307730	0.015574423571074067	UUGGCAC	ENSMUST00000115453.2|Cav1|ENSMUSG00000007655.17|caveolin 1, caveolae protein
mm39_v1_chr14_+_58308004_58308004	0.01552485760297638	UUGGCAC	ENSMUST00000165526.9|Fgf9|ENSMUSG00000021974.16|fibroblast growth factor 9
mm39_v1_chr3_+_14643669_14643756	0.015214451983749476	UUGGCAC	ENSMUST00000029069.13|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5	ENSMUST00000165922.3|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5
mm39_v1_chr5_-_42001571_42001673	0.014910691215736332	UUGGCAC	ENSMUST00000050556.11|Bod1l|ENSMUSG00000061755.11|biorientation of chromosomes in cell division 1-like	ENSMUST00000202908.2|Bod1l|ENSMUSG00000061755.11|biorientation of chromosomes in cell division 1-like
mm39_v1_chr6_+_136495784_136495808	0.014696358444474728	UUGGCAC	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr12_+_117480099_117480148	0.014483076504781504	UUGGCAC	ENSMUST00000109691.4|Rapgef5|ENSMUSG00000041992.10|Rap guanine nucleotide exchange factor (GEF) 5
mm39_v1_chr2_-_130681978_130682070	0.014294405331803836	UUGGCAC	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr7_+_97492124_97492187	0.014256310668476067	UUGGCAC	ENSMUST00000033040.12|Pak1|ENSMUSG00000030774.14|p21 (RAC1) activated kinase 1
mm39_v1_chr1_+_33758937_33759080	0.014247801834201787	UUGGCAC	ENSMUST00000088287.10|Rab23|ENSMUSG00000004768.15|RAB23, member RAS oncogene family
mm39_v1_chr12_+_78273356_78273432	0.014225649069973891	UUGGCAC	ENSMUST00000110388.10|Gphn|ENSMUSG00000047454.13|gephyrin
mm39_v1_chr16_+_38722666_38722678	0.01408937460427036	UUGGCAC	ENSMUST00000023478.8|Igsf11|ENSMUSG00000022790.15|immunoglobulin superfamily, member 11
mm39_v1_chr3_+_108498595_108498727	0.01395522177728387	UUGGCAC	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr2_-_31031814_31032029	0.0138250732735518	UUGGCAC	ENSMUST00000073879.12|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000100208.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000100207.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113555.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000075326.11|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113552.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000136181.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113564.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113562.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113560.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1
mm39_v1_chr2_+_167774247_167774300	0.01373774486814679	UUGGCAC	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr3_-_103716593_103716760	0.0136342924157731	UUGGCAC	ENSMUST00000063502.13|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106832.2|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106834.8|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000029435.15|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B
mm39_v1_chr7_-_121620366_121620445	0.013473198338082698	UUGGCAC	ENSMUST00000033160.15|Gga2|ENSMUSG00000030872.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm39_v1_chr11_+_44508137_44508169	0.013301593180409918	UUGGCAC	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr19_+_55730696_55730774	0.013235593184515745	UUGGCAC	ENSMUST00000153888.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000127233.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000061496.17|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111656.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111657.11|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr3_+_88857929_88857975	0.013113776266564847	UUGGCAC	ENSMUST00000186583.7|Ash1l|ENSMUSG00000028053.14|ASH1 like histone lysine methyltransferase
mm39_v1_chr8_-_4375320_4375413	0.013005396179397985	UUGGCAC	ENSMUST00000098950.6|Elavl1|ENSMUSG00000040028.11|ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
mm39_v1_chr10_-_118705029_118705091	0.012884103184885228	UUGGCAC	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr19_+_28812474_28812541	0.012747965514619198	UUGGCAC	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr15_-_71599664_71599697	0.012724584155083263	UUGGCAC	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr2_-_125624754_125624790	0.012600635892460976	UUGGCAC	ENSMUST00000053699.13|Secisbp2l|ENSMUSG00000035093.17|SECIS binding protein 2-like
mm39_v1_chr13_-_103470937_103471007	0.012572206454515816	UUGGCAC	ENSMUST00000167058.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4	ENSMUST00000164111.2|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr14_+_20398230_20398333	0.012335342784149344	UUGGCAC	ENSMUST00000224930.2|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000224110.2|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000225942.2|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000051915.7|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000090499.13|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000224721.2|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000090503.12|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000225991.2|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B	ENSMUST00000037698.13|Fam149b|ENSMUSG00000039599.17|family with sequence similarity 149, member B
mm39_v1_chr16_+_11140740_11140775	0.012314902194124502	UUGGCAC	ENSMUST00000180792.8|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr16_+_42727926_42728047	0.012213703366890094	UUGGCAC	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr16_-_58343789_58343883	0.011989656141069088	UUGGCAC	ENSMUST00000137035.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000149456.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr4_+_148533062_148533094	0.011763888356557476	UUGGCAC	ENSMUST00000103221.10|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase	ENSMUST00000057580.8|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase
mm39_v1_chr8_-_116434517_116434533	0.011502297587309956	UUGGCAC	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr19_-_17814984_17815006	0.011490630502855986	UUGGCAC	ENSMUST00000025618.16|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5	ENSMUST00000050715.10|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5
mm39_v1_chr15_+_66449385_66449487	0.011476791687977486	UUGGCAC	ENSMUST00000230882.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000048188.10|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000230948.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000229160.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1
mm39_v1_chr1_+_104696235_104696254	0.011409171781541615	UUGGCAC	ENSMUST00000062528.9|Cdh20|ENSMUSG00000050840.9|cadherin 20
mm39_v1_chr15_+_6737853_6737883	0.011380636806579357	UUGGCAC	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr14_-_40688764_40688834	0.01134157763468501	UUGGCAC	ENSMUST00000047652.6|Tspan14|ENSMUSG00000037824.7|tetraspanin 14
mm39_v1_chr16_-_55755208_55755243	0.011287382446783718	UUGGCAC	ENSMUST00000121129.8|Cep97|ENSMUSG00000022604.19|centrosomal protein 97	ENSMUST00000023270.14|Cep97|ENSMUSG00000022604.19|centrosomal protein 97
mm39_v1_chr17_+_25407352_25407392	0.011260654716704153	UUGGCAC	ENSMUST00000039734.12|Unkl|ENSMUSG00000015127.15|unkempt family like zinc finger
mm39_v1_chr5_-_120750623_120750668	0.011155450311178216	UUGGCAC	ENSMUST00000140554.2|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1	ENSMUST00000031599.9|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1	ENSMUST00000177800.8|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1
mm39_v1_chr4_+_106418224_106418235	0.011034871715881614	UUGGCAC	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr12_+_3857001_3857064	0.011028886797402096	UUGGCAC	ENSMUST00000020991.15|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000172509.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr1_+_74545203_74545264	0.011004810307097108	UUGGCAC	ENSMUST00000087215.7|Cnot9|ENSMUSG00000026174.10|CCR4-NOT transcription complex, subunit 9
mm39_v1_chr11_-_53871121_53871176	0.010970648066252073	UUGGCAC	ENSMUST00000076493.11|Slc22a21|ENSMUSG00000063652.11|solute carrier family 22 (organic cation transporter), member 21
mm39_v1_chr18_-_35064906_35065066	0.010889877243180445	UUGGCAC	ENSMUST00000025218.8|Etf1|ENSMUSG00000024360.9|eukaryotic translation termination factor 1
mm39_v1_chr9_-_103242096_103242164	0.010796671638213367	UUGGCAC	ENSMUST00000116517.9|Cdv3|ENSMUSG00000032803.16|carnitine deficiency-associated gene expressed in ventricle 3
mm39_v1_chr7_+_34818709_34818728	0.01079660319337164	UUGGCAC	ENSMUST00000205391.2|Cebpa|ENSMUSG00000034957.11|CCAAT/enhancer binding protein (C/EBP), alpha	ENSMUST00000042985.11|Cebpa|ENSMUSG00000034957.11|CCAAT/enhancer binding protein (C/EBP), alpha
mm39_v1_chr10_+_58230183_58230202	0.01071914632685861	UUGGCAC	ENSMUST00000020077.11|Lims1|ENSMUSG00000019920.19|LIM and senescent cell antigen-like domains 1
mm39_v1_chr5_+_130173702_130173777	0.010574179029200794	UUGGCAC	ENSMUST00000040616.9|Kctd7|ENSMUSG00000034110.9|potassium channel tetramerisation domain containing 7
mm39_v1_chr18_-_47501897_47501945	0.010567029884103515	UUGGCAC	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr16_+_43993599_43993760	0.010543028567179955	UUGGCAC	ENSMUST00000119746.8|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000088356.10|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000169582.3|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3
mm39_v1_chr11_-_59397352_59397470	0.01052832360718573	UUGGCAC	ENSMUST00000013262.15|Zkscan17|ENSMUSG00000020472.15|zinc finger with KRAB and SCAN domains 17	ENSMUST00000101150.9|Zkscan17|ENSMUSG00000020472.15|zinc finger with KRAB and SCAN domains 17
mm39_v1_chr11_+_60668350_60668390	0.010525009640638123	UUGGCAC	ENSMUST00000102667.5|Smcr8|ENSMUSG00000049323.9|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	ENSMUST00000056907.7|Smcr8|ENSMUSG00000049323.9|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm39_v1_chr12_+_112688597_112688673	0.010502108795269197	UUGGCAC	ENSMUST00000101018.11|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000092279.7|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000179041.8|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000222711.2|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B
mm39_v1_chr9_+_47441471_47441671	0.010499882076797184	UUGGCAC	ENSMUST00000114548.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000152459.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000143026.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000085909.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000114547.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000239368.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000214542.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000034581.4|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1
mm39_v1_chr11_-_4544751_4544820	0.010440024856272297	UUGGCAC	ENSMUST00000109943.10|Mtmr3|ENSMUSG00000034354.18|myotubularin related protein 3
mm39_v1_chr5_+_142615292_142615348	0.010394686151570215	UUGGCAC	ENSMUST00000036872.16|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2	ENSMUST00000110778.2|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2
mm39_v1_chr3_-_107240989_107240989	0.010393194393751531	UUGGCAC	ENSMUST00000061772.11|Rbm15|ENSMUSG00000048109.11|RNA binding motif protein 15
mm39_v1_chr6_-_148847854_148847995	0.01036390502711884	UUGGCAC	ENSMUST00000139355.8|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000146457.2|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000054080.15|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor
mm39_v1_chr17_+_34811217_34811303	0.010275856050174972	UUGGCAC	ENSMUST00000038149.13|Pbx2|ENSMUSG00000034673.15|pre B cell leukemia homeobox 2
mm39_v1_chr2_+_129642371_129642493	0.010253158818849861	UUGGCAC	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr12_+_83678987_83679099	0.010240134544978114	UUGGCAC	ENSMUST00000048155.16|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182618.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000183154.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182036.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182347.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25
mm39_v1_chr9_+_102712063_102712190	0.01011601611831096	UUGGCAC	ENSMUST00000175883.8|Ryk|ENSMUSG00000032547.13|receptor-like tyrosine kinase	ENSMUST00000035142.8|Ryk|ENSMUSG00000032547.13|receptor-like tyrosine kinase
mm39_v1_chr13_-_41233104_41233182	0.010081498477908507	UUGGCAC	ENSMUST00000070193.14|Mak|ENSMUSG00000021363.15|male germ cell-associated kinase	ENSMUST00000165087.8|Mak|ENSMUSG00000021363.15|male germ cell-associated kinase
mm39_v1_chr7_-_74204222_74204436	0.010062699114339569	UUGGCAC	ENSMUST00000134539.2|Slco3a1|ENSMUSG00000025790.15|solute carrier organic anion transporter family, member 3a1	ENSMUST00000026897.14|Slco3a1|ENSMUSG00000025790.15|solute carrier organic anion transporter family, member 3a1	ENSMUST00000098371.9|Slco3a1|ENSMUSG00000025790.15|solute carrier organic anion transporter family, member 3a1
mm39_v1_chr1_-_53824373_53824388	0.010053622910474016	UUGGCAC	ENSMUST00000027263.14|Stk17b|ENSMUSG00000026094.15|serine/threonine kinase 17b (apoptosis-inducing)
mm39_v1_chr10_-_5872386_5872405	0.010019152925988154	UUGGCAC	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr7_-_119494918_119494975	0.009973280624619028	UUGGCAC	ENSMUST00000059851.14|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chr8_-_127201801_127201837	0.009883111031292118	UUGGCAC	ENSMUST00000170518.3|Tarbp1|ENSMUSG00000090290.3|TAR RNA binding protein 1
mm39_v1_chr16_-_91394522_91394688	0.009804124713697997	UUGGCAC	ENSMUST00000023686.15|Tmem50b|ENSMUSG00000022964.15|transmembrane protein 50B
mm39_v1_chr10_-_81381009_81381028	0.009793532626817241	UUGGCAC	ENSMUST00000043604.6|Gna11|ENSMUSG00000034781.6|guanine nucleotide binding protein, alpha 11
mm39_v1_chr11_-_50321927_50321960	0.009776593296696235	UUGGCAC	ENSMUST00000020643.4|Rufy1|ENSMUSG00000020375.10|RUN and FYVE domain containing 1
mm39_v1_chr15_-_73056713_73056822	0.009677170159164554	UUGGCAC	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr15_+_8138757_8138791	0.009597139032322309	UUGGCAC	ENSMUST00000163765.3|Nup155|ENSMUSG00000022142.9|nucleoporin 155
mm39_v1_chrX_+_41156713_41156751	0.00949540192179733	UUGGCAC	ENSMUST00000115094.8|Xiap|ENSMUSG00000025860.16|X-linked inhibitor of apoptosis
mm39_v1_chr5_+_30437579_30437678	0.009431096326307504	UUGGCAC	ENSMUST00000145167.9|Selenoi|ENSMUSG00000075703.17|selenoprotein I
mm39_v1_chr9_-_119766580_119766631	0.009422914469229894	UUGGCAC	ENSMUST00000035099.9|Gorasp1|ENSMUSG00000032513.9|golgi reassembly stacking protein 1
mm39_v1_chr8_-_65302657_65302675	0.00940621419732909	UUGGCAC	ENSMUST00000034017.9|Klhl2|ENSMUSG00000031605.9|kelch-like 2, Mayven
mm39_v1_chr18_+_32296126_32296249	0.009164717916728418	UUGGCAC	ENSMUST00000096575.5|Map3k2|ENSMUSG00000024383.10|mitogen-activated protein kinase kinase kinase 2
mm39_v1_chr10_+_12966532_12966587	0.009043862072291088	UUGGCAC	ENSMUST00000121646.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121325.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121766.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr12_-_101049884_101049977	0.008941690032659474	UUGGCAC	ENSMUST00000048305.10|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A	ENSMUST00000163095.9|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A
mm39_v1_chrX_-_74174608_74174622	0.008910463922190857	UUGGCAC	ENSMUST00000033775.9|Mpp1|ENSMUSG00000031402.13|membrane protein, palmitoylated
mm39_v1_chr9_-_44679136_44679147	0.008876006976687605	UUGGCAC	ENSMUST00000034607.10|Arcn1|ENSMUSG00000032096.17|archain 1
mm39_v1_chr3_+_32490300_32490300	0.008875486216714077	UUGGCAC	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr7_-_63588610_63588704	0.008861958121455881	UUGGCAC	ENSMUST00000063694.10|Klf13|ENSMUSG00000052040.11|Kruppel-like factor 13
mm39_v1_chr4_-_151142351_151142444	0.008826815147065297	UUGGCAC	ENSMUST00000030797.4|Vamp3|ENSMUSG00000028955.4|vesicle-associated membrane protein 3
mm39_v1_chr1_-_181039509_181039580	0.008528551903550577	UUGGCAC	ENSMUST00000162819.9|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26	ENSMUST00000237749.2|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26
mm39_v1_chr2_+_30254239_30254316	0.00840838937540356	UUGGCAC	ENSMUST00000077977.14|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000140075.9|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000142801.8|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000100214.10|Miga2|ENSMUSG00000026858.19|mitoguardin 2
mm39_v1_chr1_-_156767123_156767186	0.008380932438577736	UUGGCAC	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr4_+_132857816_132857901	0.008363361157081986	UUGGCAC	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr2_+_38898065_38898088	0.00829973773666448	UUGGCAC	ENSMUST00000112862.7|Arpc5l|ENSMUSG00000026755.15|actin related protein 2/3 complex, subunit 5-like
mm39_v1_chr6_+_47812584_47812660	0.008219308551492414	UUGGCAC	ENSMUST00000079881.11|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398	ENSMUST00000114598.3|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398
mm39_v1_chr5_+_64960705_64960731	0.008148728397674752	UUGGCAC	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr19_-_46033353_46033724	0.008134503187415525	UUGGCAC	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chrX_-_142716200_142716307	0.008054035788332026	UUGGCAC	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr18_+_64387428_64387457	0.00802904007581291	UUGGCAC	ENSMUST00000025477.15|St8sia3|ENSMUSG00000056812.15|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm39_v1_chr8_-_26609153_26609260	0.007975192958799131	UUGGCAC	ENSMUST00000037182.14|Hook3|ENSMUSG00000037234.18|hook microtubule tethering protein 3
mm39_v1_chr16_+_24212284_24212320	0.00780353418974415	UUGGCAC	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr10_+_94524506_94524544	0.007747314513185045	UUGGCAC	ENSMUST00000020212.6|Cep83|ENSMUSG00000020024.8|centrosomal protein 83
mm39_v1_chr10_+_69048464_69048503	0.007632033044739506	UUGGCAC	ENSMUST00000020101.12|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1
mm39_v1_chr13_+_12580743_12580764	0.007542178747283647	UUGGCAC	ENSMUST00000221560.2|Ero1b|ENSMUSG00000057069.8|endoplasmic reticulum oxidoreductase 1 beta	ENSMUST00000071973.8|Ero1b|ENSMUSG00000057069.8|endoplasmic reticulum oxidoreductase 1 beta
mm39_v1_chr15_-_93173032_93173060	0.007498575622388392	UUGGCAC	ENSMUST00000057896.5|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000049484.13|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000230063.2|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1
mm39_v1_chr3_+_89325750_89325879	0.007421592950389507	UUGGCAC	ENSMUST00000039110.12|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000125036.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000191485.7|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1	ENSMUST00000154791.8|Shc1|ENSMUSG00000042626.14|src homology 2 domain-containing transforming protein C1
mm39_v1_chr5_-_44383943_44383975	0.007372873648001995	UUGGCAC	ENSMUST00000055128.12|Tapt1|ENSMUSG00000046985.12|transmembrane anterior posterior transformation 1
mm39_v1_chr9_+_27702243_27702299	0.007325135858173599	UUGGCAC	ENSMUST00000115243.9|Opcml|ENSMUSG00000062257.14|opioid binding protein/cell adhesion molecule-like
mm39_v1_chr11_+_77576981_77577005	0.007155575649927752	UUGGCAC	ENSMUST00000100802.11|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2	ENSMUST00000181023.2|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2
mm39_v1_chr3_+_101284391_101284421	0.007104647062142903	UUGGCAC	ENSMUST00000043983.11|Igsf3|ENSMUSG00000042035.12|immunoglobulin superfamily, member 3
mm39_v1_chr6_+_8259379_8259404	0.0070629867483609264	UUGGCAC	ENSMUST00000162034.8|Umad1|ENSMUSG00000089862.9|UMAP1-MVP12 associated (UMA) domain containing 1
mm39_v1_chr2_+_37342248_37342297	0.00706005345537435	UUGGCAC	ENSMUST00000148470.8|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1	ENSMUST00000066055.10|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1	ENSMUST00000112920.2|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1
mm39_v1_chr2_+_127089828_127089917	0.006998653725727655	UUGGCAC	ENSMUST00000035871.15|Tmem127|ENSMUSG00000034850.16|transmembrane protein 127	ENSMUST00000174503.2|Tmem127|ENSMUSG00000034850.16|transmembrane protein 127	ENSMUST00000174288.2|Tmem127|ENSMUSG00000034850.16|transmembrane protein 127
mm39_v1_chr4_+_41465134_41465164	0.006923977173134394	UUGGCAC	ENSMUST00000030154.7|Nudt2|ENSMUSG00000028443.7|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm39_v1_chr1_-_54596754_54596856	0.006813933698356305	UUGGCAC	ENSMUST00000097739.5|Pgap1|ENSMUSG00000073678.5|post-GPI attachment to proteins 1
mm39_v1_chr4_+_124696336_124696381	0.006656214730012761	UUGGCAC	ENSMUST00000138807.8|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1	ENSMUST00000030723.3|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1
mm39_v1_chrX_-_161426624_161426661	0.006603778294375971	UUGGCAC	ENSMUST00000112334.8|Reps2|ENSMUSG00000040855.16|RALBP1 associated Eps domain containing protein 2
mm39_v1_chr11_+_75541324_75541370	0.0065981027480160786	UUGGCAC	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr8_-_85414528_85414539	0.006550850774132349	UUGGCAC	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr3_-_107603778_107603890	0.006514212934419616	UUGGCAC	ENSMUST00000029490.15|Ahcyl1|ENSMUSG00000027893.15|S-adenosylhomocysteine hydrolase-like 1
mm39_v1_chr10_-_42152684_42152759	0.006466894826815929	UUGGCAC	ENSMUST00000175881.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000056974.4|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105502.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105501.2|Foxo3|ENSMUSG00000048756.12|forkhead box O3
mm39_v1_chr1_-_57011595_57011661	0.006451000069566707	UUGGCAC	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr8_-_26505605_26505678	0.0064121771544397395	UUGGCAC	ENSMUST00000016138.11|Fnta|ENSMUSG00000015994.11|farnesyltransferase, CAAX box, alpha
mm39_v1_chr8_-_8711211_8711250	0.006403137208292453	UUGGCAC	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr1_+_180978491_180978549	0.0063991425111102306	UUGGCAC	ENSMUST00000134115.8|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4	ENSMUST00000111059.2|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4
mm39_v1_chr2_+_121859025_121859137	0.006380053699763029	UUGGCAC	ENSMUST00000028668.8|Eif3j1|ENSMUSG00000027236.9|eukaryotic translation initiation factor 3, subunit J1
mm39_v1_chr10_+_62816005_62816041	0.006279485858604493	UUGGCAC	ENSMUST00000131718.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000119567.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000122231.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2
mm39_v1_chrX_-_166165743_166165757	0.006269143162723269	UUGGCAC	ENSMUST00000026839.5|Prps2|ENSMUSG00000025742.6|phosphoribosyl pyrophosphate synthetase 2
mm39_v1_chr5_-_130284366_130284379	0.00622442645392182	UUGGCAC	ENSMUST00000026387.11|Sbds|ENSMUSG00000025337.11|SBDS ribosome maturation factor
mm39_v1_chr2_+_4405769_4405786	0.006194707600862308	UUGGCAC	ENSMUST00000075767.14|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr6_-_124806430_124806447	0.006138013892795608	UUGGCAC	ENSMUST00000047510.10|Usp5|ENSMUSG00000038429.11|ubiquitin specific peptidase 5 (isopeptidase T)
mm39_v1_chr2_-_84545504_84545562	0.006078025561747932	UUGGCAC	ENSMUST00000035840.6|Zdhhc5|ENSMUSG00000034075.11|zinc finger, DHHC domain containing 5
mm39_v1_chr11_+_87017878_87017917	0.00606922537685962	UUGGCAC	ENSMUST00000041282.13|Trim37|ENSMUSG00000018548.16|tripartite motif-containing 37
mm39_v1_chr2_+_72115981_72116093	0.0060502576166339035	UUGGCAC	ENSMUST00000090824.12|Map3k20|ENSMUSG00000004085.15|mitogen-activated protein kinase kinase kinase 20	ENSMUST00000135469.8|Map3k20|ENSMUSG00000004085.15|mitogen-activated protein kinase kinase kinase 20
mm39_v1_chr8_-_29709652_29709669	0.006034081400544561	UUGGCAC	ENSMUST00000168630.4|Unc5d|ENSMUSG00000063626.7|unc-5 netrin receptor D
mm39_v1_chr5_+_67464284_67464318	0.006016203845389986	UUGGCAC	ENSMUST00000113676.6|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9	ENSMUST00000162372.8|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9
mm39_v1_chr3_-_115508680_115508721	0.005924058724005772	UUGGCAC	ENSMUST00000055676.4|S1pr1|ENSMUSG00000045092.9|sphingosine-1-phosphate receptor 1
mm39_v1_chr7_+_35033595_35033756	0.005862749315563505	UUGGCAC	ENSMUST00000032705.13|Rhpn2|ENSMUSG00000030494.14|rhophilin, Rho GTPase binding protein 2	ENSMUST00000085556.4|Rhpn2|ENSMUSG00000030494.14|rhophilin, Rho GTPase binding protein 2
mm39_v1_chr19_+_10502612_10502671	0.0057634503329257285	UUGGCAC	ENSMUST00000237321.2|Cpsf7|ENSMUSG00000034820.5|cleavage and polyadenylation specific factor 7	ENSMUST00000038379.5|Cpsf7|ENSMUSG00000034820.5|cleavage and polyadenylation specific factor 7
mm39_v1_chr8_-_123425805_123425859	0.005687241635077192	UUGGCAC	ENSMUST00000127984.9|Cbfa2t3|ENSMUSG00000006362.17|CBFA2/RUNX1 translocation partner 3
mm39_v1_chr5_-_135963408_135963467	0.0056465915756837215	UUGGCAC	ENSMUST00000198270.2|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	ENSMUST00000055808.6|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm39_v1_chr15_-_85918378_85918413	0.005628535923121464	UUGGCAC	ENSMUST00000016172.10|Celsr1|ENSMUSG00000016028.12|cadherin, EGF LAG seven-pass G-type receptor 1
mm39_v1_chr17_+_26934617_26934698	0.005520847704652249	UUGGCAC	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr11_-_97078698_97078752	0.005306182423059967	UUGGCAC	ENSMUST00000001479.5|Kpnb1|ENSMUSG00000001440.6|karyopherin (importin) beta 1
mm39_v1_chr6_-_145195903_145195988	0.005244626898216268	UUGGCAC	ENSMUST00000111710.8|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000155145.2|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000032399.12|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000203147.3|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog
mm39_v1_chr9_+_102594867_102594929	0.005240638038767882	UUGGCAC	ENSMUST00000035121.14|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2
mm39_v1_chr12_-_85017586_85017674	0.005238956468003639	UUGGCAC	ENSMUST00000165886.2|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000167448.8|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000043169.14|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1
mm39_v1_chr13_+_93444514_93444542	0.004922846299695098	UUGGCAC	ENSMUST00000079086.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr11_+_110956980_110957000	0.0049046101078471845	UUGGCAC	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr3_+_121220146_121220188	0.004868754596722794	UUGGCAC	ENSMUST00000029773.13|Cnn3|ENSMUSG00000053931.12|calponin 3, acidic
mm39_v1_chr9_-_66826928_66826992	0.004632929914361994	UUGGCAC	ENSMUST00000041139.9|Rab8b|ENSMUSG00000036943.10|RAB8B, member RAS oncogene family
mm39_v1_chr4_+_120711974_120712041	0.004407810096684062	UUGGCAC	ENSMUST00000071093.9|Rims3|ENSMUSG00000032890.18|regulating synaptic membrane exocytosis 3
mm39_v1_chr2_-_37537224_37537297	0.004240899184572216	UUGGCAC	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr4_+_136197066_136197161	0.004235713413118536	UUGGCAC	ENSMUST00000170102.8|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000105849.9|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1	ENSMUST00000129230.3|Luzp1|ENSMUSG00000001089.15|leucine zipper protein 1
mm39_v1_chr11_+_105975403_105975449	0.004156372058704888	UUGGCAC	ENSMUST00000002044.10|Map3k3|ENSMUSG00000020700.12|mitogen-activated protein kinase kinase kinase 3
mm39_v1_chr10_-_84963841_84963900	0.004107750467280142	UUGGCAC	ENSMUST00000214193.2|Mterf2|ENSMUSG00000049038.4|mitochondrial transcription termination factor 2	ENSMUST00000050813.4|Mterf2|ENSMUSG00000049038.4|mitochondrial transcription termination factor 2	ENSMUST00000217027.2|Mterf2|ENSMUSG00000049038.4|mitochondrial transcription termination factor 2
mm39_v1_chr1_+_36550948_36550987	0.0039046833459624804	UUGGCAC	ENSMUST00000001166.14|Cnnm3|ENSMUSG00000001138.14|cyclin M3	ENSMUST00000097776.4|Cnnm3|ENSMUSG00000001138.14|cyclin M3
mm39_v1_chr10_-_80754016_80754110	0.003892303543830677	UUGGCAC	ENSMUST00000057623.14|Lmnb2|ENSMUSG00000062075.14|lamin B2	ENSMUST00000179022.8|Lmnb2|ENSMUSG00000062075.14|lamin B2
mm39_v1_chr2_-_91540864_91540927	0.0038772331879899057	UUGGCAC	ENSMUST00000028678.9|Atg13|ENSMUSG00000027244.15|autophagy related 13	ENSMUST00000076803.12|Atg13|ENSMUSG00000027244.15|autophagy related 13
mm39_v1_chr3_+_88049633_88049790	0.0038677289334348368	UUGGCAC	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr8_-_122379631_122379652	0.003850235674004903	UUGGCAC	ENSMUST00000046386.5|Zcchc14|ENSMUSG00000061410.7|zinc finger, CCHC domain containing 14
mm39_v1_chr13_-_85437118_85437178	0.0037806662886459863	UUGGCAC	ENSMUST00000109552.3|Rasa1|ENSMUSG00000021549.15|RAS p21 protein activator 1
mm39_v1_chr18_+_65713301_65713471	0.0035523491560965157	UUGGCAC	ENSMUST00000049016.12|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000235493.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000183236.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chr13_+_51254852_51254971	0.0035102990434541514	UUGGCAC	ENSMUST00000095797.6|Spin1|ENSMUSG00000021395.12|spindlin 1
mm39_v1_chr9_+_74769166_74769203	0.0035062486955441856	UUGGCAC	ENSMUST00000056006.11|Onecut1|ENSMUSG00000043013.11|one cut domain, family member 1
mm39_v1_chr14_+_60615128_60615153	0.003443101144504032	UUGGCAC	ENSMUST00000022561.9|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr5_-_68004743_68004781	0.0033434610663305477	UUGGCAC	ENSMUST00000072971.13|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113652.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113651.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000037380.15|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm39_v1_chr3_-_89152320_89152506	0.0032994332828543515	UUGGCAC	ENSMUST00000107464.8|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46	ENSMUST00000090924.13|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46
mm39_v1_chr10_+_107998219_107998269	0.0032727993598989525	UUGGCAC	ENSMUST00000070663.6|Ppp1r12a|ENSMUSG00000019907.11|protein phosphatase 1, regulatory subunit 12A
mm39_v1_chr2_-_163760603_163760603	0.003272243446957078	UUGGCAC	ENSMUST00000044734.3|Rims4|ENSMUSG00000035226.6|regulating synaptic membrane exocytosis 4
mm39_v1_chr12_+_32870334_32870360	0.0032615578501108025	UUGGCAC	ENSMUST00000020886.9|Nampt|ENSMUSG00000020572.9|nicotinamide phosphoribosyltransferase
mm39_v1_chr2_+_162785394_162785437	0.0032562495410263276	UUGGCAC	ENSMUST00000035751.12|L3mbtl1|ENSMUSG00000035576.14|L3MBTL1 histone methyl-lysine binding protein	ENSMUST00000156954.8|L3mbtl1|ENSMUSG00000035576.14|L3MBTL1 histone methyl-lysine binding protein
mm39_v1_chr6_-_136150076_136150146	0.0031854848499640355	UUGGCAC	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr15_+_57558048_57558089	0.003170118702429283	UUGGCAC	ENSMUST00000096430.11|Zhx2|ENSMUSG00000071757.11|zinc fingers and homeoboxes 2
mm39_v1_chr1_-_105284383_105284402	0.003150844227913758	UUGGCAC	ENSMUST00000058688.7|Rnf152|ENSMUSG00000047496.7|ring finger protein 152
mm39_v1_chr11_+_60619224_60619281	0.003140610459605416	UUGGCAC	ENSMUST00000018743.5|Mief2|ENSMUSG00000018599.6|mitochondrial elongation factor 2
mm39_v1_chrX_+_52001108_52001238	0.0030452575052988626	UUGGCAC	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr11_-_95200382_95200428	0.003005367300342794	UUGGCAC	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr14_-_65499835_65499941	0.0029664347368474563	UUGGCAC	ENSMUST00000131309.3|Fzd3|ENSMUSG00000007989.8|frizzled class receptor 3
mm39_v1_chr5_-_98178811_98178821	0.0029403116780683624	UUGGCAC	ENSMUST00000031281.14|Antxr2|ENSMUSG00000029338.14|anthrax toxin receptor 2
mm39_v1_chr4_+_65042411_65042411	0.0029143535195764224	UUGGCAC	ENSMUST00000084501.4|Pappa|ENSMUSG00000028370.8|pregnancy-associated plasma protein A
mm39_v1_chr15_-_66841465_66841496	0.0028584834386345425	UUGGCAC	ENSMUST00000170903.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000166420.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000005256.14|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000164070.2|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1
mm39_v1_chr6_+_42241916_42241968	0.0026824239765026133	UUGGCAC	ENSMUST00000031895.13|Casp2|ENSMUSG00000029863.14|caspase 2
mm39_v1_chr4_-_126362372_126362446	0.002630653507637606	UUGGCAC	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr12_+_69230931_69230944	0.002489546951792728	UUGGCAC	ENSMUST00000060579.10|Mgat2|ENSMUSG00000043998.11|mannoside acetylglucosaminyltransferase 2
mm39_v1_chr9_-_65734826_65734859	0.0024842520440407963	UUGGCAC	ENSMUST00000159109.2|Zfp609|ENSMUSG00000040524.10|zinc finger protein 609
mm39_v1_chr19_+_8718777_8718820	0.0024621171391315108	UUGGCAC	ENSMUST00000176381.8|Stx5a|ENSMUSG00000010110.18|syntaxin 5A
mm39_v1_chr7_-_144024451_144024512	0.0024538402458421666	UUGGCAC	ENSMUST00000033407.13|Cttn|ENSMUSG00000031078.16|cortactin
mm39_v1_chr5_-_147013384_147013401	0.0024095451943081034	UUGGCAC	ENSMUST00000016664.8|Lnx2|ENSMUSG00000016520.8|ligand of numb-protein X 2
mm39_v1_chr19_+_41471067_41471128	0.001923286441022684	UUGGCAC	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr17_-_29483075_29483160	0.0018444856186426016	UUGGCAC	ENSMUST00000024802.10|Ppil1|ENSMUSG00000024007.16|peptidylprolyl isomerase (cyclophilin)-like 1
mm39_v1_chr9_+_59485475_59485620	0.001777345857961917	UUGGCAC	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr11_-_3864664_3864664	0.0017710861401653646	UUGGCAC	ENSMUST00000109995.2|Slc35e4|ENSMUSG00000048807.3|solute carrier family 35, member E4	ENSMUST00000051207.2|Slc35e4|ENSMUSG00000048807.3|solute carrier family 35, member E4
mm39_v1_chr8_+_27532583_27532616	0.0016775995262580032	UUGGCAC	ENSMUST00000033875.10|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000209525.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein
mm39_v1_chr1_-_121255753_121255778	0.0016493017221220765	UUGGCAC	ENSMUST00000003818.14|Insig2|ENSMUSG00000003721.15|insulin induced gene 2
mm39_v1_chr3_-_9675130_9675146	0.001626479963270708	UUGGCAC	ENSMUST00000041124.13|Zfp704|ENSMUSG00000040209.13|zinc finger protein 704
mm39_v1_chr16_+_78098344_78098384	0.0015272157822651896	UUGGCAC	ENSMUST00000232148.2|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor	ENSMUST00000023572.15|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor
mm39_v1_chr8_-_110464345_110464418	0.0014996590539401073	UUGGCAC	ENSMUST00000212605.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000093162.4|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000212726.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like
mm39_v1_chrX_+_18028814_18028897	0.0014835114040473673	UUGGCAC	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr5_+_144482693_144482712	0.0013674248035685198	UUGGCAC	ENSMUST00000071782.8|Nptx2|ENSMUSG00000059991.8|neuronal pentraxin 2
mm39_v1_chr12_-_8550003_8550017	0.0013258162236994549	UUGGCAC	ENSMUST00000067384.6|Rhob|ENSMUSG00000054364.6|ras homolog family member B
mm39_v1_chr13_+_13612136_13612136	0.0012745611831032327	UUGGCAC	ENSMUST00000005532.9|Nid1|ENSMUSG00000005397.9|nidogen 1
mm39_v1_chr1_-_46893206_46893240	0.0010394443241241284	UUGGCAC	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr12_+_111005768_111005834	0.0009536952999926858	UUGGCAC	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr8_-_80126120_80126168	0.0006402274218769876	UUGGCAC	ENSMUST00000066091.14|Smad1|ENSMUSG00000031681.17|SMAD family member 1	ENSMUST00000109885.8|Smad1|ENSMUSG00000031681.17|SMAD family member 1
mm39_v1_chr7_-_102408573_102408684	0.0004906971728582855	UUGGCAC	ENSMUST00000210453.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000232246.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000239110.2|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000060187.15|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78	ENSMUST00000168007.3|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78
mm39_v1_chr4_-_22488296_22488366	0.00048584025839023485	UUGGCAC	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr5_-_22755274_22755384	0.0004478471191895235	UUGGCAC	ENSMUST00000030872.12|Orc5|ENSMUSG00000029012.12|origin recognition complex, subunit 5
mm39_v1_chr15_+_80595486_80595541	0.0003812325562141313	UUGGCAC	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr11_+_49737558_49737585	0.0003488452803552185	UUGGCAC	ENSMUST00000109179.9|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000178543.8|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000164643.8|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9	ENSMUST00000020634.14|Mapk9|ENSMUSG00000020366.19|mitogen-activated protein kinase 9
mm39_v1_chr2_-_31735937_31736017	0.00034251928169717926	UUGGCAC	ENSMUST00000028188.8|Fibcd1|ENSMUSG00000026841.8|fibrinogen C domain containing 1
mm39_v1_chr8_+_111646548_111646628	0.00013847005522506133	UUGGCAC	ENSMUST00000117534.8|St3gal2|ENSMUSG00000031749.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	ENSMUST00000034197.5|St3gal2|ENSMUSG00000031749.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
mm39_v1_chrX_-_51702790_51702801	0.00012803067377025764	UUGGCAC	ENSMUST00000069360.14|Gpc3|ENSMUSG00000055653.14|glypican 3
mm39_v1_chr9_+_72952115_72952146	3.654649364161055e-06	UUGGCAC	ENSMUST00000184146.8|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family	ENSMUST00000034722.5|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family
