avrg: 2D miR_HR1_12
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
HR1 | 2D_BclXL |
HR10 | 2D_Mycp53null |
HR11 | 2D_Mycp53null |
HR12 | 2D_Mycp53null |
HR2 | 2D_BclXL |
HR3 | 2D_BclXL |
HR4 | 2D_MycBclXL |
HR5 | 2D_MycBclXL |
HR6 | 2D_MycBclXL |
HR7 | 2D_p53null |
HR8 | 2D_p53null |
HR9 | 2D_p53null |
Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
Max_Mycn | 11.52 |
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E2f1 | 10.59 |
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E2f2_E2f5 | 10.53 |
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Ybx1_Nfya_Nfyb_Nfyc_Cebpz | 10.37 |
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Ahr | 10.05 |
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Tfdp1_Wt1_Egr2 | 8.17 |
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Snai1_Zeb1_Snai2 | 6.90 |
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Zbtb33_Chd2 | 6.81 |
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E2f4 | 5.65 |
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Yy1_Yy2 | 5.26 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.
Sample name | Condition | Replicate/Batch |
---|---|---|
2D_BclXL | ||
2D_MycBclXL | ||
2D_p53null | ||
2D_Mycp53null |