Project
avrg: 2D miR_HR1_12
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Results for AAGGCAC
Z-value: 2.43
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miRNA associated with seed AAGGCAC
| Name | miRBASE accession |
|---|---|
|
mmu-miR-124-3p.1
|
MIMAT0000134 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr11_+_61022560 Show fit | 2.94 |
ENSMUST00000089184.4
|
potassium inwardly-rectifying channel, subfamily J, member 12 |
|
| chr2_-_144331695 Show fit | 2.45 |
ENSMUST00000103171.3
|
ovo-like 2 (Drosophila) |
|
| chr8_-_38661508 Show fit | 2.34 |
ENSMUST00000118896.1
|
sarcoglycan zeta |
|
| chr5_+_141241490 Show fit | 2.19 |
ENSMUST00000085774.4
|
sidekick homolog 1 (chicken) |
|
| chr19_+_32619997 Show fit | 2.19 |
ENSMUST00000025833.6
|
3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
|
| chr8_+_35375719 Show fit | 1.99 |
ENSMUST00000070481.6
|
protein phosphatase 1, regulatory (inhibitor) subunit 3B |
|
| chr12_-_11436607 Show fit | 1.77 |
ENSMUST00000072299.5
|
visinin-like 1 |
|
| chr11_+_87760533 Show fit | 1.71 |
ENSMUST00000039627.5
ENSMUST00000100644.3 |
benzodiazepine receptor associated protein 1 |
|
| chr14_+_55854115 Show fit | 1.46 |
ENSMUST00000168479.1
|
NYN domain and retroviral integrase containing |
|
| chr18_+_74442500 Show fit | 1.44 |
ENSMUST00000074157.6
|
myosin VB |
Network of associatons between targets according to the STRING database.
First level regulatory network of AAGGCAC
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 3.2 | GO:0010107 | potassium ion import(GO:0010107) |
| 0.3 | 2.5 | GO:0060214 | endocardium formation(GO:0060214) |
| 0.4 | 2.2 | GO:0000103 | sulfate assimilation(GO:0000103) |
| 0.0 | 2.2 | GO:0007030 | Golgi organization(GO:0007030) |
| 0.1 | 2.1 | GO:0009437 | carnitine metabolic process(GO:0009437) |
| 0.0 | 1.8 | GO:0035774 | positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774) |
| 0.0 | 1.8 | GO:0060047 | heart contraction(GO:0060047) |
| 0.2 | 1.7 | GO:0021562 | vestibulocochlear nerve development(GO:0021562) |
| 0.2 | 1.7 | GO:0098870 | neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870) |
| 0.2 | 1.7 | GO:1901898 | negative regulation of relaxation of cardiac muscle(GO:1901898) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 4.0 | GO:0000139 | Golgi membrane(GO:0000139) |
| 0.0 | 3.6 | GO:0030315 | T-tubule(GO:0030315) |
| 0.5 | 3.2 | GO:0016012 | sarcoglycan complex(GO:0016012) |
| 0.2 | 2.7 | GO:0043083 | synaptic cleft(GO:0043083) |
| 0.1 | 2.0 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
| 0.0 | 1.8 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
| 0.0 | 1.6 | GO:0008180 | COP9 signalosome(GO:0008180) |
| 0.0 | 1.6 | GO:0005776 | autophagosome(GO:0005776) |
| 0.5 | 1.5 | GO:1990851 | Wnt-Frizzled-LRP5/6 complex(GO:1990851) |
| 0.2 | 1.5 | GO:0000813 | ESCRT I complex(GO:0000813) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 3.3 | GO:0005242 | inward rectifier potassium channel activity(GO:0005242) |
| 0.0 | 3.0 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
| 0.0 | 2.6 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
| 0.0 | 2.4 | GO:0046875 | ephrin receptor binding(GO:0046875) |
| 0.0 | 2.3 | GO:0035255 | ionotropic glutamate receptor binding(GO:0035255) |
| 0.1 | 2.1 | GO:0070566 | adenylyltransferase activity(GO:0070566) |
| 0.1 | 1.9 | GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115) |
| 0.1 | 1.5 | GO:0015386 | potassium:proton antiporter activity(GO:0015386) |
| 0.0 | 1.5 | GO:0001540 | beta-amyloid binding(GO:0001540) |
| 0.5 | 1.4 | GO:0017082 | mineralocorticoid receptor activity(GO:0017082) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 2.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
| 0.0 | 2.6 | PID EPHB FWD PATHWAY | EPHB forward signaling |
| 0.0 | 2.4 | PID BMP PATHWAY | BMP receptor signaling |
| 0.0 | 2.3 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
| 0.0 | 2.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
| 0.0 | 1.9 | ST ADRENERGIC | Adrenergic Pathway |
| 0.0 | 1.7 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
| 0.1 | 1.5 | PID ERBB1 RECEPTOR PROXIMAL PATHWAY | EGF receptor (ErbB1) signaling pathway |
| 0.1 | 1.4 | PID CONE PATHWAY | Visual signal transduction: Cones |
| 0.0 | 1.4 | SIG BCR SIGNALING PATHWAY | Members of the BCR signaling pathway |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 4.7 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
| 0.2 | 2.2 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
| 0.0 | 2.2 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
| 0.1 | 1.7 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
| 0.0 | 1.7 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
| 0.1 | 1.5 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |
| 0.0 | 1.5 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
| 0.0 | 1.5 | REACTOME RORA ACTIVATES CIRCADIAN EXPRESSION | Genes involved in RORA Activates Circadian Expression |
| 0.0 | 1.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
| 0.0 | 1.4 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |