ISMARA results: GAGAACU

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avrg: 2D miR_HR1_12

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Results for GAGAACU

Z-value: 0.12

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miRNA associated with seed GAGAACU

Name	miRBASE accession
mmu-miR-146a-5p miRBase	MIMAT0000158
mmu-miR-146b-5p miRBase	MIMAT0003475

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_17853451 Show fit	0.03	ENSMUST00000029881.3	Mmp16 Ensembl NCBI MGI UniProt Show fit	matrix metallopeptidase 16
chr15_-_53902472 Show fit	0.02	ENSMUST00000078673.6	Samd12 Ensembl NCBI MGI UniProt Show fit	sterile alpha motif domain containing 12
chr5_-_96161990 Show fit	0.02	ENSMUST00000155901.1	Cnot6l Ensembl NCBI MGI UniProt Show fit	CCR4-NOT transcription complex, subunit 6-like
chr5_+_105415738 Show fit	0.02	ENSMUST00000112707.1	Lrrc8b Ensembl NCBI MGI UniProt Show fit	leucine rich repeat containing 8 family, member B
chr11_-_45944910 Show fit	0.01	ENSMUST00000129820.1	Lsm11 Ensembl NCBI MGI UniProt Show fit	U7 snRNP-specific Sm-like protein LSM11
chr19_+_18713192 Show fit	0.01	ENSMUST00000062753.2	D030056L22Rik Ensembl NCBI MGI UniProt Show fit	RIKEN cDNA D030056L22 gene
chr11_-_5381734 Show fit	0.01	ENSMUST00000172492.1	Znrf3 Ensembl NCBI MGI UniProt Show fit	zinc and ring finger 3
chr3_-_26133734 Show fit	0.01	ENSMUST00000108308.3 ENSMUST00000075054.4	Nlgn1 Ensembl NCBI MGI UniProt Show fit	neuroligin 1
chr1_+_40515362 Show fit	0.01	ENSMUST00000027237.5	Il18rap Ensembl NCBI MGI UniProt Show fit	interleukin 18 receptor accessory protein
chr1_+_156558844 Show fit	0.01	ENSMUST00000166172.2 ENSMUST00000027888.6	Abl2 Ensembl NCBI MGI UniProt Show fit	v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)

Showing 1 to 10 of 68 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

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Gene Ontology Analysis