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2D miR_HR1_12

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Results for Atf5

Z-value: 0.50

Motif logo

Transcription factors associated with Atf5

Gene Symbol Gene ID Gene Info
ENSMUSG00000038539.8 activating transcription factor 5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Atf5mm10_v2_chr7_-_44816586_44816658-0.402.0e-01Click!

Activity profile of Atf5 motif

Sorted Z-values of Atf5 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_24611314 0.49 ENSMUST00000073325.5
pleckstrin homology-like domain, family B, member 3
chrX_+_41401128 0.44 ENSMUST00000115103.2
glutamate receptor, ionotropic, AMPA3 (alpha 3)
chr6_-_16898441 0.42 ENSMUST00000031533.7
transcription factor EC
chr4_-_43046196 0.37 ENSMUST00000036462.5
family with sequence similarity 214, member B
chr6_+_129350237 0.37 ENSMUST00000065289.4
C-type lectin domain family 12, member a
chrX_+_41401304 0.34 ENSMUST00000076349.5
glutamate receptor, ionotropic, AMPA3 (alpha 3)
chr11_+_95842283 0.32 ENSMUST00000107714.2
ENSMUST00000107711.1
guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr7_-_105600103 0.32 ENSMUST00000033185.8
hemopexin
chr10_+_79974409 0.28 ENSMUST00000131816.1
glutamate receptor, ionotropic, NMDA3B
chr4_-_114908892 0.28 ENSMUST00000068654.3
forkhead box D2
chr4_+_11321930 0.26 ENSMUST00000181105.1
predicted gene, 26663
chr17_+_55952623 0.23 ENSMUST00000003274.6
Epstein-Barr virus induced gene 3
chr15_-_102529025 0.23 ENSMUST00000096143.1
activating transcription factor 7
chr5_-_24601961 0.22 ENSMUST00000030791.7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
chrX_+_41401476 0.22 ENSMUST00000165288.1
glutamate receptor, ionotropic, AMPA3 (alpha 3)
chr11_-_83302586 0.22 ENSMUST00000176374.1
peroxisomal biogenesis factor 12
chr11_+_83302817 0.21 ENSMUST00000142680.1
adaptor-related protein complex 2, beta 1 subunit
chr4_+_54947976 0.21 ENSMUST00000098070.3
zinc finger protein 462
chr6_-_40585783 0.21 ENSMUST00000177178.1
ENSMUST00000129948.2
ENSMUST00000101491.4
C-type lectin domain family 5, member a
chr1_+_59516264 0.20 ENSMUST00000114243.1
predicted gene 973
chr11_+_4236411 0.17 ENSMUST00000075221.2
oncostatin M
chr7_-_4164442 0.16 ENSMUST00000140410.1
ENSMUST00000143825.1
CDC42 effector protein (Rho GTPase binding) 5
chr7_+_128062657 0.16 ENSMUST00000120355.1
ENSMUST00000106240.2
ENSMUST00000098015.3
integrin alpha M
chr4_+_63215402 0.15 ENSMUST00000036300.6
collagen, type XXVII, alpha 1
chr6_+_33249085 0.15 ENSMUST00000052266.8
ENSMUST00000090381.4
ENSMUST00000115080.1
exocyst complex component 4
chr7_-_25390098 0.14 ENSMUST00000054301.7
lipase, hormone sensitive
chrX_-_20931520 0.13 ENSMUST00000001156.7
complement factor properdin
chr7_-_4725082 0.13 ENSMUST00000086363.4
ENSMUST00000086364.4
transmembrane protein 150B
chr4_+_86748526 0.13 ENSMUST00000082026.7
ENSMUST00000045512.8
DENN/MADD domain containing 4C
chr8_+_54954728 0.13 ENSMUST00000033915.7
glycoprotein m6a
chr6_+_65590382 0.13 ENSMUST00000114236.1
TNFAIP3 interacting protein 3
chr1_-_64121389 0.13 ENSMUST00000055001.3
Kruppel-like factor 7 (ubiquitous)
chr19_-_42202150 0.12 ENSMUST00000018966.7
secreted frizzled-related sequence protein 5
chr8_+_81773105 0.12 ENSMUST00000170160.1
inositol polyphosphate-4-phosphatase, type II
chr17_+_35866606 0.11 ENSMUST00000113814.4
protein phosphatase 1, regulatory subunit 18
chr15_-_34356421 0.11 ENSMUST00000179647.1
RIKEN cDNA 9430069I07 gene
chr16_+_38089001 0.11 ENSMUST00000023507.6
glycogen synthase kinase 3 beta
chr1_+_88106834 0.11 ENSMUST00000113137.1
UDP glucuronosyltransferase 1 family, polypeptide A6B
chr9_-_32541589 0.11 ENSMUST00000016231.7
Friend leukemia integration 1
chr9_-_37433138 0.11 ENSMUST00000115038.1
roundabout homolog 3 (Drosophila)
chr2_+_172393900 0.10 ENSMUST00000109136.2
Cas scaffolding protein family member 4
chr11_+_70505244 0.10 ENSMUST00000019063.2
transmembrane 4 superfamily member 5
chr18_-_15063560 0.10 ENSMUST00000168989.1
potassium channel tetramerisation domain containing 1
chr16_-_16560046 0.10 ENSMUST00000172181.2
FYVE, RhoGEF and PH domain containing 4
chr4_-_8239034 0.10 ENSMUST00000066674.7
carbonic anhydrase 8
chr4_-_119415494 0.09 ENSMUST00000063642.2
coiled-coil domain containing 30
chr18_+_65581704 0.09 ENSMUST00000182979.1
zinc finger protein 532
chr15_-_103340085 0.09 ENSMUST00000168828.1
zinc finger protein 385A
chr1_+_74375203 0.09 ENSMUST00000027368.5
solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1_-_135167606 0.09 ENSMUST00000027682.8
G protein-coupled receptor 37-like 1
chr11_+_101582236 0.09 ENSMUST00000039581.7
ENSMUST00000100403.2
ENSMUST00000107194.1
ENSMUST00000128614.1
transmembrane protein 106A
chr14_+_18271122 0.09 ENSMUST00000132374.1
ENSMUST00000133460.1
NFKB inhibitor interacting Ras-like protein 1
chr11_+_83302641 0.08 ENSMUST00000176430.1
ENSMUST00000065692.7
adaptor-related protein complex 2, beta 1 subunit
chrX_+_42151002 0.08 ENSMUST00000123245.1
stromal antigen 2
chr2_+_10047838 0.08 ENSMUST00000181588.1
RIKEN cDNA C630004M23 gene
chr17_-_46031813 0.08 ENSMUST00000024747.7
vascular endothelial growth factor A
chr18_-_23041641 0.07 ENSMUST00000097651.3
nucleolar protein 4
chr10_+_23920356 0.07 ENSMUST00000051532.4
trace amine-associated receptor 1
chr12_-_80112998 0.07 ENSMUST00000165114.1
ENSMUST00000021552.1
zinc finger protein 36, C3H type-like 1
chr14_-_70443442 0.07 ENSMUST00000000793.5
polymerase (RNA) III (DNA directed) polypeptide D
chrX_+_99003224 0.07 ENSMUST00000149999.1
START domain containing 8
chr19_-_37178011 0.07 ENSMUST00000133988.1
cytoplasmic polyadenylation element binding protein 3
chr19_+_45363734 0.07 ENSMUST00000065601.5
ENSMUST00000111936.2
beta-transducin repeat containing protein
chr5_-_24527276 0.07 ENSMUST00000088311.4
gastrulation brain homeobox 1
chrX_-_48674478 0.07 ENSMUST00000053970.3
G-protein coupled receptor 119
chr16_-_46010212 0.06 ENSMUST00000130481.1
phosphatidylinositol-specific phospholipase C, X domain containing 2
chrX_-_41911877 0.06 ENSMUST00000047037.8
THO complex 2
chr14_+_12284198 0.06 ENSMUST00000112669.3
ENSMUST00000163392.1
RIKEN cDNA 3830406C13 gene
chr4_-_11322109 0.06 ENSMUST00000084892.5
ENSMUST00000128024.1
dpy-19-like 4 (C. elegans)
chr7_+_128062698 0.06 ENSMUST00000119696.1
integrin alpha M
chr4_+_133011506 0.06 ENSMUST00000105915.1
ENSMUST00000105916.1
AT hook, DNA binding motif, containing 1
chr10_+_115384951 0.06 ENSMUST00000036044.8
zinc finger, C3H1-type containing
chr18_-_11051479 0.06 ENSMUST00000180789.1
RIKEN cDNA 1010001N08 gene
chr5_+_19907502 0.06 ENSMUST00000101558.3
membrane associated guanylate kinase, WW and PDZ domain containing 2
chr11_-_120572822 0.06 ENSMUST00000168360.1
prolyl 4-hydroxylase, beta polypeptide
chr10_-_20725023 0.06 ENSMUST00000020165.7
phosphodiesterase 7B
chr15_-_79164477 0.06 ENSMUST00000040019.4
SRY-box containing gene 10
chr1_+_88138364 0.06 ENSMUST00000014263.4
UDP glucuronosyltransferase 1 family, polypeptide A6A
chr16_+_17898617 0.05 ENSMUST00000055374.6
testis-specific serine kinase 2
chr5_+_149678224 0.05 ENSMUST00000100404.3
beta 1,3-galactosyltransferase-like
chr5_+_119670825 0.05 ENSMUST00000121021.1
T-box 3
chr9_+_54980880 0.05 ENSMUST00000093844.3
cholinergic receptor, nicotinic, alpha polypeptide 5
chr4_+_21727695 0.05 ENSMUST00000065928.4
cyclin C
chr14_+_64652524 0.05 ENSMUST00000100473.4
kinesin family member 13B
chr13_-_98206151 0.05 ENSMUST00000109426.1
Rho guanine nucleotide exchange factor (GEF) 28
chr7_-_4996044 0.05 ENSMUST00000162502.1
zinc finger protein 579
chr6_-_127769427 0.04 ENSMUST00000032500.8
protein arginine N-methyltransferase 8
chrX_+_42150672 0.04 ENSMUST00000069619.7
stromal antigen 2
chr4_+_21727726 0.04 ENSMUST00000102997.1
ENSMUST00000120679.1
ENSMUST00000108240.2
cyclin C
chr12_-_76962178 0.04 ENSMUST00000110395.3
ENSMUST00000082136.5
Max protein
chr15_+_12117848 0.04 ENSMUST00000128475.1
ENSMUST00000134277.1
zinc finger RNA binding protein
chr5_+_119671011 0.04 ENSMUST00000018748.8
T-box 3
chr2_+_172393794 0.04 ENSMUST00000099061.2
ENSMUST00000103073.2
Cas scaffolding protein family member 4
chr7_-_4996095 0.04 ENSMUST00000108572.1
zinc finger protein 579
chr7_+_25268387 0.04 ENSMUST00000169392.1
capicua homolog (Drosophila)
chr2_+_10372426 0.04 ENSMUST00000114864.2
ENSMUST00000116594.2
ENSMUST00000041105.6
Scm-like with four mbt domains 2
chr10_-_14718191 0.04 ENSMUST00000020016.4
gap junction protein, epsilon 1
chr1_-_56971762 0.04 ENSMUST00000114415.3
special AT-rich sequence binding protein 2
chr7_+_29134854 0.04 ENSMUST00000161522.1
ENSMUST00000159975.1
ENSMUST00000032811.5
ENSMUST00000094617.4
RAS guanyl releasing protein 4
chr18_+_64254359 0.03 ENSMUST00000025477.7
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr11_+_87578384 0.03 ENSMUST00000107962.1
ENSMUST00000122067.1
septin 4
chr12_+_89812467 0.03 ENSMUST00000110133.2
ENSMUST00000110130.2
neurexin III
chr1_-_64121456 0.03 ENSMUST00000142009.1
ENSMUST00000114086.1
Kruppel-like factor 7 (ubiquitous)
chr3_-_18243289 0.03 ENSMUST00000035625.6
cytochrome P450, family 7, subfamily b, polypeptide 1
chr18_+_35562158 0.03 ENSMUST00000166793.1
matrin 3
chr12_-_59219725 0.03 ENSMUST00000043204.7
F-box protein 33
chr10_-_14544972 0.03 ENSMUST00000041168.4
G protein-coupled receptor 126
chr10_-_20724696 0.03 ENSMUST00000170265.1
phosphodiesterase 7B
chr3_+_103914099 0.03 ENSMUST00000051139.6
ENSMUST00000068879.4
rosbin, round spermatid basic protein 1
chr16_-_16560201 0.03 ENSMUST00000162045.1
ENSMUST00000162124.1
ENSMUST00000161861.1
FYVE, RhoGEF and PH domain containing 4
chr2_+_86007778 0.03 ENSMUST00000062166.1
olfactory receptor 1032
chrX_-_17572241 0.03 ENSMUST00000176638.1
ENSMUST00000026016.6
FUN14 domain containing 1
chr2_+_147187424 0.03 ENSMUST00000144411.1
RIKEN cDNA 6430503K07 gene
chr13_-_116309639 0.02 ENSMUST00000036060.6
ISL1 transcription factor, LIM/homeodomain
chr1_+_188953744 0.02 ENSMUST00000127077.1
Usher syndrome 2A (autosomal recessive, mild)
chr2_-_153444441 0.02 ENSMUST00000109784.1
RIKEN cDNA 8430427H17 gene
chr16_-_92321425 0.02 ENSMUST00000062638.5
RIKEN cDNA 4930563D23 gene
chr7_+_29134971 0.02 ENSMUST00000160194.1
RAS guanyl releasing protein 4
chr1_-_65179058 0.02 ENSMUST00000097709.4
isocitrate dehydrogenase 1 (NADP+), soluble
chr12_+_3365108 0.02 ENSMUST00000020999.5
kinesin family member 3C
chr14_-_12823031 0.02 ENSMUST00000067491.6
ENSMUST00000177814.1
ENSMUST00000112658.1
ENSMUST00000112657.2
Ca2+-dependent secretion activator
chr16_-_10447340 0.02 ENSMUST00000051118.6
trans-golgi network vesicle protein 23A
chr6_-_137571007 0.02 ENSMUST00000100841.2
epidermal growth factor receptor pathway substrate 8
chr1_-_22805994 0.02 ENSMUST00000097808.4
regulating synaptic membrane exocytosis 1
chr11_-_61762040 0.02 ENSMUST00000004955.7
ENSMUST00000168115.1
phosphoribosyl pyrophosphate synthetase-associated protein 2
chr3_-_79737794 0.02 ENSMUST00000078527.6
relaxin/insulin-like family peptide receptor 1
chr4_-_127970951 0.02 ENSMUST00000030614.2
cDNA sequence CK137956
chr8_-_110039330 0.01 ENSMUST00000109222.2
carbohydrate (chondroitin 6/keratan) sulfotransferase 4
chr4_-_144686368 0.01 ENSMUST00000105747.1
predicted gene 436
chr18_+_65582390 0.01 ENSMUST00000169679.1
ENSMUST00000183326.1
zinc finger protein 532
chr1_-_175692624 0.01 ENSMUST00000027809.7
opsin 3
chr11_-_105456674 0.01 ENSMUST00000049995.3
ENSMUST00000100332.3
membrane-associated ring finger (C3HC4) 10
chr5_+_137761680 0.01 ENSMUST00000110983.2
ENSMUST00000031738.4
TSC22 domain family, member 4
chr10_-_53699343 0.01 ENSMUST00000163761.1
family with sequence similarity 184, member A
chr1_-_157256682 0.01 ENSMUST00000134543.1
RAS protein activator like 2
chr8_-_95807458 0.01 ENSMUST00000098473.4
ENSMUST00000068452.8
CCR4-NOT transcription complex, subunit 1
chr4_-_154097105 0.01 ENSMUST00000105643.1
ENSMUST00000133533.1
ENSMUST00000097762.4
transformation related protein 73
chr15_-_103252810 0.00 ENSMUST00000154510.1
nuclear factor, erythroid derived 2
chr17_+_34898463 0.00 ENSMUST00000114033.2
ENSMUST00000078061.6
euchromatic histone lysine N-methyltransferase 2
chr3_+_114030532 0.00 ENSMUST00000123619.1
ENSMUST00000092155.5
collagen, type XI, alpha 1
chrX_-_17571563 0.00 ENSMUST00000177213.1
FUN14 domain containing 1

Network of associatons between targets according to the STRING database.

First level regulatory network of Atf5

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0015886 heme transport(GO:0015886)
0.0 0.1 GO:2000041 regulation of planar cell polarity pathway involved in axis elongation(GO:2000040) negative regulation of planar cell polarity pathway involved in axis elongation(GO:2000041)
0.0 0.1 GO:0003169 coronary vein morphogenesis(GO:0003169)
0.0 0.2 GO:0003219 cardiac right ventricle formation(GO:0003219)
0.0 0.1 GO:0046340 diacylglycerol catabolic process(GO:0046340)
0.0 0.2 GO:0038165 oncostatin-M-mediated signaling pathway(GO:0038165)
0.0 0.3 GO:0099590 neurotransmitter receptor internalization(GO:0099590)
0.0 0.2 GO:0014004 microglia differentiation(GO:0014004) microglia development(GO:0014005)
0.0 0.1 GO:0060932 atrioventricular bundle cell differentiation(GO:0003167) His-Purkinje system cell differentiation(GO:0060932)
0.0 0.1 GO:1902162 regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902162)
0.0 0.1 GO:0036016 response to interleukin-3(GO:0036015) cellular response to interleukin-3(GO:0036016) regulation of dopaminergic neuron differentiation(GO:1904338)
0.0 0.2 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.0 0.1 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.0 0.1 GO:1900248 cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)
0.0 0.1 GO:0043091 L-arginine import(GO:0043091) arginine import(GO:0090467)
0.0 0.1 GO:0061642 axon midline choice point recognition(GO:0016199) chemoattraction of axon(GO:0061642)
0.0 1.0 GO:0001919 regulation of receptor recycling(GO:0001919)
0.0 0.2 GO:0048341 paraxial mesoderm formation(GO:0048341)
0.0 0.1 GO:0097374 sensory neuron axon guidance(GO:0097374)
0.0 0.1 GO:0018406 protein C-linked glycosylation(GO:0018103) peptidyl-tryptophan modification(GO:0018211) protein C-linked glycosylation via tryptophan(GO:0018317) protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan(GO:0018406)
0.0 0.1 GO:0030035 microspike assembly(GO:0030035)
0.0 0.2 GO:0052697 flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697)
0.0 0.1 GO:0002756 MyD88-independent toll-like receptor signaling pathway(GO:0002756)
0.0 0.2 GO:0031274 positive regulation of pseudopodium assembly(GO:0031274)
0.0 0.1 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.3 GO:0035235 ionotropic glutamate receptor signaling pathway(GO:0035235)
0.0 0.0 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919)
0.0 0.2 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.0 0.1 GO:0006957 complement activation, alternative pathway(GO:0006957)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:0043083 synaptic cleft(GO:0043083)
0.1 0.2 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.1 GO:0030312 external encapsulating structure(GO:0030312)
0.0 0.3 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.0 0.2 GO:0032584 growth cone membrane(GO:0032584)
0.0 0.1 GO:0016222 procollagen-proline 4-dioxygenase complex(GO:0016222)
0.0 0.2 GO:0071564 npBAF complex(GO:0071564)
0.0 0.1 GO:1990909 Wnt signalosome(GO:1990909)
0.0 0.1 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:0004971 AMPA glutamate receptor activity(GO:0004971)
0.1 0.3 GO:0015232 heme transporter activity(GO:0015232)
0.0 0.2 GO:0001851 complement component C3b binding(GO:0001851)
0.0 0.1 GO:0016316 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316)
0.0 0.1 GO:0042134 rRNA primary transcript binding(GO:0042134)
0.0 0.1 GO:0043183 vascular endothelial growth factor receptor 1 binding(GO:0043183)
0.0 0.3 GO:0005234 extracellular-glutamate-gated ion channel activity(GO:0005234)
0.0 0.1 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798)
0.0 0.1 GO:0035925 mRNA 3'-UTR AU-rich region binding(GO:0035925)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID CONE PATHWAY Visual signal transduction: Cones

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.3 REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS Genes involved in Trafficking of GluR2-containing AMPA receptors