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2D miR_HR1_12

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Results for Rorc_Nr1d1

Z-value: 0.49

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Transcription factors associated with Rorc_Nr1d1

Gene Symbol Gene ID Gene Info
ENSMUSG00000028150.8 RAR-related orphan receptor gamma
ENSMUSG00000020889.11 nuclear receptor subfamily 1, group D, member 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Rorcmm10_v2_chr3_+_94377432_94377451-0.156.4e-01Click!
Nr1d1mm10_v2_chr11_-_98775333_987753540.058.7e-01Click!

Activity profile of Rorc_Nr1d1 motif

Sorted Z-values of Rorc_Nr1d1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr10_+_95417352 0.78 ENSMUST00000181781.1
RIKEN cDNA 5730420D15 gene
chr17_+_33638056 0.64 ENSMUST00000052079.7
PML-RAR alpha-regulated adaptor molecule 1
chr7_+_113207465 0.49 ENSMUST00000047321.7
aryl hydrocarbon receptor nuclear translocator-like
chr8_+_3665747 0.45 ENSMUST00000014118.2
RIKEN cDNA 1810033B17 gene
chr9_-_75441652 0.40 ENSMUST00000181896.1
RIKEN cDNA A130057D12 gene
chr17_-_37280418 0.33 ENSMUST00000077585.2
olfactory receptor 99
chr6_+_71199827 0.33 ENSMUST00000067492.7
fatty acid binding protein 1, liver
chr5_-_145879857 0.32 ENSMUST00000035918.7
cytochrome P450, family 3, subfamily a, polypeptide 11
chrX_+_103422010 0.32 ENSMUST00000182089.1
predicted gene, 26992
chr1_-_120505084 0.31 ENSMUST00000027639.1
macrophage receptor with collagenous structure
chr19_+_26623419 0.29 ENSMUST00000176584.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr7_+_45705088 0.25 ENSMUST00000080885.3
D site albumin promoter binding protein
chr11_+_66956620 0.25 ENSMUST00000150220.1
RIKEN cDNA 9130409J20 gene
chr5_+_64970069 0.23 ENSMUST00000031080.8
family with sequence similarity 114, member A1
chr17_+_24886643 0.21 ENSMUST00000117890.1
ENSMUST00000168265.1
ENSMUST00000120943.1
ENSMUST00000068508.6
ENSMUST00000119829.1
splA/ryanodine receptor domain and SOCS box containing 3
chr2_+_90885860 0.21 ENSMUST00000111466.2
C1q and tumor necrosis factor related protein 4
chr8_-_3694167 0.19 ENSMUST00000005678.4
Fc receptor, IgE, low affinity II, alpha polypeptide
chr9_-_45204083 0.19 ENSMUST00000034599.8
transmembrane protease, serine 4
chr16_-_20730544 0.18 ENSMUST00000076422.5
thrombopoietin
chr9_+_46012810 0.15 ENSMUST00000126865.1
SIK family kinase 3
chr15_-_5108469 0.15 ENSMUST00000141020.1
caspase recruitment domain family, member 6
chr5_-_103629279 0.15 ENSMUST00000031263.1
solute carrier family 10 (sodium/bile acid cotransporter family), member 6
chr1_-_162478004 0.14 ENSMUST00000086074.5
ENSMUST00000070330.7
dynamin 3
chr11_+_70030023 0.14 ENSMUST00000143920.2
discs, large homolog 4 (Drosophila)
chr10_+_130322845 0.14 ENSMUST00000042586.8
thymocyte expressed, positive selection associated 1
chr15_-_5108492 0.12 ENSMUST00000118365.2
caspase recruitment domain family, member 6
chr11_+_102885160 0.11 ENSMUST00000100369.3
family with sequence similarity 187, member A
chr3_+_90600203 0.11 ENSMUST00000001047.7
S100 calcium binding protein A3
chr1_+_6734827 0.11 ENSMUST00000139838.1
suppression of tumorigenicity 18
chr9_-_101034892 0.11 ENSMUST00000035116.5
propionyl Coenzyme A carboxylase, beta polypeptide
chr10_-_81291227 0.11 ENSMUST00000045744.6
tight junction protein 3
chr14_-_60197173 0.10 ENSMUST00000131670.1
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr4_+_54945038 0.10 ENSMUST00000133895.1
zinc finger protein 462
chr4_-_33189410 0.10 ENSMUST00000098181.2
peptidase M20 domain containing 2
chr17_+_37046555 0.10 ENSMUST00000172789.1
gamma-aminobutyric acid (GABA) B receptor, 1
chr9_-_101034857 0.10 ENSMUST00000142676.1
ENSMUST00000149322.1
propionyl Coenzyme A carboxylase, beta polypeptide
chr3_-_89393629 0.09 ENSMUST00000124783.1
ENSMUST00000126027.1
zinc finger and BTB domain containing 7B
chrX_-_136203637 0.09 ENSMUST00000151592.1
ENSMUST00000131510.1
ENSMUST00000066819.4
transcription elongation factor A (SII)-like 5
chr10_+_73821857 0.09 ENSMUST00000177128.1
ENSMUST00000064562.7
ENSMUST00000129404.2
ENSMUST00000105426.3
ENSMUST00000131321.2
ENSMUST00000126920.2
ENSMUST00000147189.2
ENSMUST00000105424.3
ENSMUST00000092420.6
ENSMUST00000105429.3
ENSMUST00000131724.2
ENSMUST00000152655.2
ENSMUST00000151116.2
ENSMUST00000155701.2
ENSMUST00000152819.2
ENSMUST00000125517.2
ENSMUST00000124046.1
ENSMUST00000149977.2
ENSMUST00000146682.1
ENSMUST00000177107.1
protocadherin 15
chr5_-_123141067 0.08 ENSMUST00000162697.1
ENSMUST00000160321.1
ENSMUST00000159637.1
expressed sequence AI480526
chr11_-_100527896 0.08 ENSMUST00000107389.1
ENSMUST00000007131.9
ATP citrate lyase
chr10_+_39612934 0.08 ENSMUST00000019987.6
TRAF3 interacting protein 2
chr6_-_29380426 0.08 ENSMUST00000147483.2
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr17_-_51810866 0.08 ENSMUST00000176669.1
special AT-rich sequence binding protein 1
chr11_+_95712673 0.07 ENSMUST00000107717.1
zinc finger protein 652
chr11_+_94327984 0.07 ENSMUST00000107818.2
ENSMUST00000051221.6
ankyrin repeat domain 40
chr17_-_46032366 0.07 ENSMUST00000071648.5
ENSMUST00000142351.2
ENSMUST00000167860.1
vascular endothelial growth factor A
chr11_+_120673359 0.07 ENSMUST00000135346.1
ENSMUST00000127269.1
ENSMUST00000131727.2
ENSMUST00000149389.1
ENSMUST00000153346.1
alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr8_-_3624989 0.07 ENSMUST00000142431.1
Purkinje cell protein 2 (L7)
chr3_-_108889990 0.07 ENSMUST00000053065.4
ENSMUST00000102620.3
fibronectin type III domain containing 7
chr11_-_100527862 0.07 ENSMUST00000107385.1
ATP citrate lyase
chr10_+_73821937 0.07 ENSMUST00000134009.2
ENSMUST00000125006.2
ENSMUST00000177420.1
protocadherin 15
chrX_-_143933204 0.07 ENSMUST00000112851.1
ENSMUST00000112856.2
ENSMUST00000033642.3
doublecortin
chr12_-_84876479 0.06 ENSMUST00000163189.1
ENSMUST00000110254.2
ENSMUST00000002073.6
latent transforming growth factor beta binding protein 2
chr15_-_25149072 0.06 ENSMUST00000056401.4
RIKEN cDNA 9230109A22 gene
chr15_-_66801577 0.06 ENSMUST00000168589.1
src-like adaptor
chr3_-_89764581 0.06 ENSMUST00000029562.3
cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr10_+_57784859 0.05 ENSMUST00000020024.5
fatty acid binding protein 7, brain
chr3_+_90603767 0.05 ENSMUST00000001046.5
ENSMUST00000107330.1
S100 calcium binding protein A4
chr11_+_81860679 0.05 ENSMUST00000021044.3
RIKEN cDNA 5530401A14 gene
chr9_-_78355743 0.05 ENSMUST00000125479.1
glutathione S-transferase, alpha 2 (Yc2)
chr17_-_17855188 0.05 ENSMUST00000003762.6
hyaluronan synthase1
chr6_+_61180313 0.05 ENSMUST00000126214.1
coiled-coil serine rich 1
chr3_+_79884496 0.05 ENSMUST00000118853.1
family with sequence similarity 198, member B
chrX_-_143933089 0.05 ENSMUST00000087313.3
doublecortin
chr6_-_67491849 0.05 ENSMUST00000118364.1
interleukin 23 receptor
chr12_-_100159601 0.05 ENSMUST00000021596.7
nrde-2 necessary for RNA interference, domain containing
chr5_+_144190284 0.05 ENSMUST00000060747.7
basic helix-loop-helix family, member a15
chr5_-_122779278 0.04 ENSMUST00000111668.3
calcium/calmodulin-dependent protein kinase kinase 2, beta
chr19_+_22448242 0.04 ENSMUST00000037901.6
transient receptor potential cation channel, subfamily M, member 3
chr8_-_3625025 0.04 ENSMUST00000133459.1
Purkinje cell protein 2 (L7)
chr3_-_53463234 0.04 ENSMUST00000056749.7
NHL repeat containing 3
chr18_+_84935158 0.04 ENSMUST00000037718.9
F-box protein 15
chr15_-_50882806 0.04 ENSMUST00000184885.1
trichorhinophalangeal syndrome I (human)
chr2_+_158502612 0.04 ENSMUST00000059889.3
adipogenin
chr17_-_46031813 0.04 ENSMUST00000024747.7
vascular endothelial growth factor A
chr1_+_189728264 0.04 ENSMUST00000097442.2
protein tyrosine phosphatase, non-receptor type 14
chr2_+_61593077 0.04 ENSMUST00000112495.1
ENSMUST00000112501.2
TRAF family member-associated Nf-kappa B activator
chr15_+_102270540 0.04 ENSMUST00000181801.1
predicted gene 9918
chr7_+_127296291 0.04 ENSMUST00000106306.2
ENSMUST00000120857.1
integrin alpha L
chr13_-_52981027 0.04 ENSMUST00000071065.7
nuclear factor, interleukin 3, regulated
chr7_+_127296251 0.04 ENSMUST00000117762.1
integrin alpha L
chr10_+_106470281 0.04 ENSMUST00000029404.9
ENSMUST00000169303.1
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr6_+_134830145 0.04 ENSMUST00000046303.5
cAMP responsive element binding protein-like 2
chr9_+_54863742 0.04 ENSMUST00000034843.7
iron responsive element binding protein 2
chr2_+_61593125 0.04 ENSMUST00000112494.1
TRAF family member-associated Nf-kappa B activator
chr17_+_23600856 0.03 ENSMUST00000095595.2
ENSMUST00000115509.1
ENSMUST00000120967.1
ENSMUST00000148062.1
ENSMUST00000129227.1
ENSMUST00000123866.1
zinc finger and SCAN domain containing 10
chr11_-_116198701 0.03 ENSMUST00000072948.4
acyl-Coenzyme A oxidase 1, palmitoyl
chr1_-_74304120 0.03 ENSMUST00000141560.1
transmembrane BAX inhibitor motif containing 1
chr3_-_84304762 0.03 ENSMUST00000107692.1
tripartite motif-containing 2
chr19_-_47692042 0.03 ENSMUST00000026045.7
ENSMUST00000086923.5
collagen, type XVII, alpha 1
chr11_-_51688614 0.03 ENSMUST00000007921.2
RIKEN cDNA 0610009B22 gene
chr14_+_105258712 0.03 ENSMUST00000138283.1
Nedd4 family interacting protein 2
chr11_+_94328242 0.03 ENSMUST00000021227.5
ankyrin repeat domain 40
chr12_-_72408934 0.03 ENSMUST00000078505.7
reticulon 1
chr11_-_51635870 0.03 ENSMUST00000001081.3
required for meiotic nuclear division 5 homolog B (S. cerevisiae)
chr14_-_54864055 0.03 ENSMUST00000142283.2
homeodomain leucine zipper-encoding gene
chr7_-_19118357 0.03 ENSMUST00000141380.1
predicted gene 4969
chr8_-_3625541 0.03 ENSMUST00000136105.1
Purkinje cell protein 2 (L7)
chr11_+_96931387 0.03 ENSMUST00000107633.1
proline rich 15-like
chr5_-_115484297 0.02 ENSMUST00000112067.1
sirtuin 4
chr14_-_50893255 0.02 ENSMUST00000164415.1
kelch-like 33
chr7_-_45211877 0.02 ENSMUST00000033057.7
dickkopf-like 1
chr7_-_126585775 0.02 ENSMUST00000084589.4
ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr3_-_108889706 0.02 ENSMUST00000180063.1
fibronectin type III domain containing 7
chr6_-_97205549 0.02 ENSMUST00000164744.1
ENSMUST00000089287.5
ubiquitin-like modifier activating enzyme 3
chr2_-_91710519 0.02 ENSMUST00000028678.8
ENSMUST00000076803.5
autophagy related 13
chr11_-_116199040 0.02 ENSMUST00000066587.5
acyl-Coenzyme A oxidase 1, palmitoyl
chr8_-_3625274 0.02 ENSMUST00000004749.6
Purkinje cell protein 2 (L7)
chrX_+_42151002 0.02 ENSMUST00000123245.1
stromal antigen 2
chr7_+_28693997 0.02 ENSMUST00000108280.1
F-box protein 27
chr14_-_36935560 0.02 ENSMUST00000183038.1
coiled-coil serine rich 2
chr4_+_98546919 0.02 ENSMUST00000030290.7
InaD-like (Drosophila)
chr12_-_54695829 0.02 ENSMUST00000162106.1
ENSMUST00000160085.1
ENSMUST00000161592.1
ENSMUST00000163433.1
E2F-associated phosphoprotein
chr15_+_89253035 0.02 ENSMUST00000088788.3
protein phosphatase 6, regulatory subunit 2
chr7_-_126625676 0.02 ENSMUST00000032961.3
nuclear protein transcription regulator 1
chr15_+_81872309 0.02 ENSMUST00000023116.6
aconitase 2, mitochondrial
chr2_+_48949495 0.02 ENSMUST00000112745.1
methyl-CpG binding domain protein 5
chr2_+_57997884 0.01 ENSMUST00000112616.1
ENSMUST00000166729.1
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
chr7_+_45627482 0.01 ENSMUST00000057927.7
Ras interacting protein 1
chr2_-_170427828 0.01 ENSMUST00000013667.2
ENSMUST00000109152.2
ENSMUST00000068137.4
breast carcinoma amplified sequence 1
chr9_+_75441518 0.01 ENSMUST00000048937.4
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
chr6_-_88874045 0.01 ENSMUST00000038409.5
podocalyxin-like 2
chr2_-_60881360 0.01 ENSMUST00000164147.1
ENSMUST00000112509.1
RNA binding motif, single stranded interacting protein 1
chr2_+_91710852 0.01 ENSMUST00000128140.1
ENSMUST00000140183.1
harbinger transposase derived 1
chr11_+_116198853 0.01 ENSMUST00000021130.6
TEN1 telomerase capping complex subunit
chr13_-_8871696 0.01 ENSMUST00000054251.6
ENSMUST00000176813.1
WD repeat domain 37
chr18_-_65393844 0.01 ENSMUST00000035548.8
alpha-kinase 2
chr5_+_145083830 0.01 ENSMUST00000031625.8
actin related protein 2/3 complex, subunit 1A
chr12_+_116047713 0.01 ENSMUST00000073551.5
ENSMUST00000183125.1
zinc finger protein 386 (Kruppel-like)
chr19_+_6384395 0.00 ENSMUST00000035269.8
ENSMUST00000113483.1
muscle glycogen phosphorylase
chr7_+_127296369 0.00 ENSMUST00000170971.1
integrin alpha L
chr17_+_24896488 0.00 ENSMUST00000024978.6
NME/NM23 nucleoside diphosphate kinase 3
chr13_+_52596847 0.00 ENSMUST00000055087.6
spleen tyrosine kinase
chr2_+_91710900 0.00 ENSMUST00000142692.1
ENSMUST00000090608.5
harbinger transposase derived 1
chr5_+_145084100 0.00 ENSMUST00000124379.1
actin related protein 2/3 complex, subunit 1A

Network of associatons between targets according to the STRING database.

First level regulatory network of Rorc_Nr1d1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0090403 oxidative stress-induced premature senescence(GO:0090403)
0.1 0.6 GO:0043313 regulation of neutrophil degranulation(GO:0043313)
0.1 0.2 GO:0050973 detection of mechanical stimulus involved in equilibrioception(GO:0050973)
0.0 0.2 GO:0038163 thrombopoietin-mediated signaling pathway(GO:0038163)
0.0 0.1 GO:1902336 neuropilin signaling pathway(GO:0038189) VEGF-activated neuropilin signaling pathway(GO:0038190) positive regulation of retinal ganglion cell axon guidance(GO:1902336)
0.0 0.1 GO:0098884 postsynaptic neurotransmitter receptor internalization(GO:0098884)
0.0 0.3 GO:0035887 aortic smooth muscle cell differentiation(GO:0035887)
0.0 0.1 GO:0043376 regulation of CD8-positive, alpha-beta T cell differentiation(GO:0043376)
0.0 0.0 GO:0007113 endomitotic cell cycle(GO:0007113)
0.0 0.3 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000)
0.0 0.1 GO:2000158 positive regulation of ubiquitin-specific protease activity(GO:2000158)
0.0 0.1 GO:0060084 synaptic transmission involved in micturition(GO:0060084)
0.0 0.4 GO:0007194 negative regulation of adenylate cyclase activity(GO:0007194)
0.0 0.1 GO:0045226 extracellular polysaccharide biosynthetic process(GO:0045226) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.1 GO:0061092 regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092)
0.0 0.2 GO:0016056 rhodopsin mediated signaling pathway(GO:0016056)
0.0 0.1 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.2 GO:0051712 positive regulation of killing of cells of other organism(GO:0051712)
0.0 0.3 GO:0050907 detection of chemical stimulus involved in sensory perception(GO:0050907)
0.0 0.0 GO:0090649 response to oxygen-glucose deprivation(GO:0090649) cellular response to oxygen-glucose deprivation(GO:0090650)
0.0 0.1 GO:0099628 receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628)
0.0 0.0 GO:0061762 CAMKK-AMPK signaling cascade(GO:0061762)
0.0 0.1 GO:0050862 positive regulation of T cell receptor signaling pathway(GO:0050862)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0098843 postsynaptic endocytic zone(GO:0098843)
0.0 0.5 GO:0033391 chromatoid body(GO:0033391)
0.0 0.3 GO:0045179 apical cortex(GO:0045179)
0.0 0.1 GO:0034687 integrin alphaL-beta2 complex(GO:0034687)
0.0 0.1 GO:0038039 G-protein coupled receptor heterodimeric complex(GO:0038039)
0.0 0.3 GO:0071564 npBAF complex(GO:0071564)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0004658 propionyl-CoA carboxylase activity(GO:0004658)
0.0 0.5 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)
0.0 0.2 GO:0019863 IgE binding(GO:0019863)
0.0 0.3 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.0 0.1 GO:0031798 type 1 metabotropic glutamate receptor binding(GO:0031798)
0.0 0.1 GO:0043183 vascular endothelial growth factor receptor 1 binding(GO:0043183)
0.0 0.1 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.3 GO:0070330 aromatase activity(GO:0070330)
0.0 0.1 GO:0030369 ICAM-3 receptor activity(GO:0030369)
0.0 0.1 GO:0035800 deubiquitinase activator activity(GO:0035800)
0.0 0.1 GO:0031812 G-protein coupled nucleotide receptor binding(GO:0031811) P2Y1 nucleotide receptor binding(GO:0031812)
0.0 0.1 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.0 0.1 GO:0050501 hyaluronan synthase activity(GO:0050501)
0.0 0.0 GO:0005143 interleukin-12 receptor binding(GO:0005143)
0.0 0.0 GO:0030350 iron-responsive element binding(GO:0030350)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID CIRCADIAN PATHWAY Circadian rhythm pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA
0.0 0.1 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.0 0.3 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression