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2D miR_HR1_12

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Results for Arid3a

Z-value: 0.62

Motif logo

Transcription factors associated with Arid3a

Gene Symbol Gene ID Gene Info
ENSMUSG00000019564.6 AT rich interactive domain 3A (BRIGHT-like)

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Arid3amm10_v2_chr10_+_79930419_79930428-0.481.2e-01Click!

Activity profile of Arid3a motif

Sorted Z-values of Arid3a motif

Promoter Log-likelihood Transcript Gene Gene Info
chr13_-_3945349 1.86 ENSMUST00000058610.7
urocortin 3
chr1_-_158958367 1.60 ENSMUST00000159861.2
pappalysin 2
chr11_+_117484368 1.02 ENSMUST00000092394.3
predicted gene 11733
chr4_+_58943575 0.90 ENSMUST00000107554.1
zinc finger with KRAB and SCAN domains 16
chr13_+_72632597 0.88 ENSMUST00000172353.1
Iroquois related homeobox 2 (Drosophila)
chr8_+_84415348 0.88 ENSMUST00000121390.1
ENSMUST00000122053.1
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr15_-_3583191 0.78 ENSMUST00000069451.4
growth hormone receptor
chr9_+_108392820 0.64 ENSMUST00000035234.4
RIKEN cDNA 1700102P08 gene
chr7_+_140941550 0.63 ENSMUST00000079403.4
ATH1, acid trehalase-like 1 (yeast)
chr17_-_47421873 0.61 ENSMUST00000073143.6
RIKEN cDNA 1700001C19 gene
chr1_+_171113918 0.58 ENSMUST00000129651.1
ENSMUST00000151340.1
RIKEN cDNA 1700009P17 gene
chr15_-_3582596 0.53 ENSMUST00000161770.1
growth hormone receptor
chr3_-_85741389 0.52 ENSMUST00000094148.4
family with sequence similarity 160, member A1
chr16_-_4679703 0.51 ENSMUST00000038552.6
ENSMUST00000090480.4
coronin 7
chr11_+_87664274 0.50 ENSMUST00000092800.5
ring finger protein 43
chr7_-_121981669 0.48 ENSMUST00000057576.7
component of oligomeric golgi complex 7
chr11_+_58199556 0.48 ENSMUST00000035266.4
ENSMUST00000094169.4
ENSMUST00000168280.1
ENSMUST00000058704.8
interferon gamma induced GTPase
immunity-related GTPase family M member 2
chr18_-_6241486 0.48 ENSMUST00000025083.7
kinesin family member 5B
chr15_+_83563571 0.47 ENSMUST00000047419.6
translocator protein
chr12_+_69963452 0.45 ENSMUST00000110560.1
predicted gene 3086
chr15_+_100334929 0.45 ENSMUST00000075420.4
methyltransferase like 7A3
chr10_+_79996479 0.43 ENSMUST00000132517.1
ATP-binding cassette, sub-family A (ABC1), member 7
chr19_+_58728887 0.39 ENSMUST00000048644.5
pancreatic lipase related protein 1
chr11_+_5520652 0.37 ENSMUST00000063084.9
X-box binding protein 1
chr7_+_51878967 0.36 ENSMUST00000051912.6
growth arrest specific 2
chr1_+_60181495 0.36 ENSMUST00000160834.1
neurobeachin like 1
chr7_+_51879041 0.34 ENSMUST00000107591.2
growth arrest specific 2
chr18_-_6241470 0.33 ENSMUST00000163210.1
kinesin family member 5B
chr4_-_147642496 0.33 ENSMUST00000133006.1
ENSMUST00000037565.7
ENSMUST00000105720.1
RIKEN cDNA 2610305D13 gene
chr5_-_87535113 0.32 ENSMUST00000120150.1
sulfotransferase family 1B, member 1
chr3_+_122895072 0.32 ENSMUST00000023820.5
fatty acid binding protein 2, intestinal
chr15_+_10314102 0.31 ENSMUST00000127467.1
prolactin receptor
chr15_-_3583146 0.31 ENSMUST00000110698.2
growth hormone receptor
chr17_+_36837123 0.29 ENSMUST00000179968.1
ENSMUST00000130367.1
ENSMUST00000130801.1
ENSMUST00000144182.1
ENSMUST00000123715.1
ENSMUST00000053434.8
tripartite motif-containing 26
chr10_-_127751707 0.28 ENSMUST00000079692.5
G protein-coupled receptor 182
chr5_+_145083830 0.28 ENSMUST00000031625.8
actin related protein 2/3 complex, subunit 1A
chrX_+_163911401 0.28 ENSMUST00000140845.1
adaptor-related protein complex 1, sigma 2 subunit
chr4_-_25281752 0.27 ENSMUST00000038705.7
UFM1 specific ligase 1
chr12_+_4769278 0.26 ENSMUST00000020967.4
profilin family, member 4
chr5_+_113490447 0.25 ENSMUST00000094452.3
WSC domain containing 2
chr18_+_36939178 0.25 ENSMUST00000115662.2
protocadherin alpha 2
chr9_+_54538984 0.24 ENSMUST00000060242.5
ENSMUST00000118413.1
SH2 domain containing 7
chr1_+_179961110 0.24 ENSMUST00000076687.5
ENSMUST00000097450.3
CDC42 binding protein kinase alpha
chr2_+_164460945 0.24 ENSMUST00000072452.4
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr11_-_110095974 0.24 ENSMUST00000100287.2
ATP-binding cassette, sub-family A (ABC1), member 8a
chr14_+_26894557 0.23 ENSMUST00000090337.4
ENSMUST00000165929.2
ankyrin repeat and SOCS box-containing 14
chr13_-_92030897 0.23 ENSMUST00000149630.1
RAS protein-specific guanine nucleotide-releasing factor 2
chr2_-_32982007 0.22 ENSMUST00000028129.7
solute carrier family 2, (facilitated glucose transporter), member 8
chr1_-_132139666 0.21 ENSMUST00000027697.5
cyclin-dependent kinase 18
chr1_+_155158703 0.21 ENSMUST00000027743.7
syntaxin 6
chr11_-_46707059 0.20 ENSMUST00000055102.6
ENSMUST00000125008.1
T cell immunoglobulin and mucin domain containing 2
chr4_+_129106807 0.20 ENSMUST00000148979.1
transmembrane protein 54
chr7_+_99594605 0.20 ENSMUST00000162290.1
arrestin, beta 1
chr4_-_108071327 0.20 ENSMUST00000106701.1
sterol carrier protein 2, liver
chr4_-_134552122 0.19 ENSMUST00000060435.6
selenoprotein N, 1
chr4_-_41517326 0.18 ENSMUST00000030152.6
ENSMUST00000095126.4
RIKEN cDNA 1110017D15 gene
chr7_-_126976092 0.18 ENSMUST00000181859.1
RIKEN cDNA D830044I16 gene
chr9_+_114731177 0.18 ENSMUST00000035007.8
CKLF-like MARVEL transmembrane domain containing 6
chr4_+_134930898 0.18 ENSMUST00000030622.2
SYF2 homolog, RNA splicing factor (S. cerevisiae)
chr16_-_57292845 0.18 ENSMUST00000023434.8
ENSMUST00000120112.1
ENSMUST00000119407.1
transmembrane protein 30C
chr11_+_62551676 0.17 ENSMUST00000136938.1
ubiquitin B
chr1_-_139781236 0.17 ENSMUST00000027612.8
ENSMUST00000111989.2
ENSMUST00000111986.2
predicted gene 4788
chr1_-_132139605 0.17 ENSMUST00000112362.2
cyclin-dependent kinase 18
chr5_-_70842617 0.17 ENSMUST00000031119.1
gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
chr17_-_24936894 0.17 ENSMUST00000115228.2
ENSMUST00000117509.1
ENSMUST00000121723.1
ENSMUST00000119115.1
ENSMUST00000121787.1
ENSMUST00000088345.5
ENSMUST00000120035.1
mitogen-activated protein kinase 8 interacting protein 3
chr7_+_12897800 0.16 ENSMUST00000055528.4
ENSMUST00000117189.1
ENSMUST00000120809.1
ENSMUST00000119989.1
zinc finger and SCAN domain containing 22
chr1_+_179960472 0.16 ENSMUST00000097453.2
ENSMUST00000111117.1
CDC42 binding protein kinase alpha
chr11_+_100319880 0.15 ENSMUST00000049385.7
eukaryotic translation initiation factor 1
chr8_+_22227322 0.14 ENSMUST00000160585.1
thrombospondin, type I, domain 1
chr17_-_24936969 0.14 ENSMUST00000178969.1
ENSMUST00000115229.3
mitogen-activated protein kinase 8 interacting protein 3
chr8_+_22227292 0.14 ENSMUST00000069828.3
thrombospondin, type I, domain 1
chr10_+_116966274 0.14 ENSMUST00000033651.3
RIKEN cDNA D630029K05 gene
chr11_-_107348130 0.13 ENSMUST00000134763.1
phosphatidylinositol transfer protein, cytoplasmic 1
chr7_+_102101736 0.13 ENSMUST00000033300.2
ADP-ribosyltransferase 1
chr19_+_56461629 0.13 ENSMUST00000178590.1
ENSMUST00000039666.6
pleckstrin homology domain containing, family S member 1
chr10_-_52194956 0.12 ENSMUST00000117992.2
Ros1 proto-oncogene
chr5_-_23616528 0.12 ENSMUST00000088392.4
serine/arginine-rich protein specific kinase 2
chr7_+_27452417 0.12 ENSMUST00000108357.1
biliverdin reductase B (flavin reductase (NADPH))
chr14_+_47472547 0.12 ENSMUST00000168833.1
ENSMUST00000163324.1
ENSMUST00000043112.7
F-box protein 34
chr11_-_110095937 0.12 ENSMUST00000106664.3
ENSMUST00000046223.7
ENSMUST00000106662.1
ATP-binding cassette, sub-family A (ABC1), member 8a
chr2_-_165388245 0.11 ENSMUST00000103084.3
zinc finger protein 334
chr11_+_83175186 0.11 ENSMUST00000000208.5
ENSMUST00000167596.1
schlafen 4
chr13_+_59585259 0.10 ENSMUST00000168367.1
ENSMUST00000022038.7
ENSMUST00000166923.1
N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr3_+_95282897 0.10 ENSMUST00000039537.7
ENSMUST00000107187.2
family with sequence similarity 63, member A
chr1_+_17145357 0.10 ENSMUST00000026879.7
ganglioside-induced differentiation-associated-protein 1
chr14_+_47472628 0.10 ENSMUST00000095941.2
F-box protein 34
chr13_-_55415166 0.09 ENSMUST00000054146.3
profilin 3
chr12_+_65225513 0.08 ENSMUST00000046331.4
WD repeat domain 20b
chr3_-_135608221 0.08 ENSMUST00000132668.1
nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
chr7_+_118597295 0.08 ENSMUST00000121715.1
ENSMUST00000098088.4
transmembrane channel-like gene family 5
chr18_-_73754457 0.07 ENSMUST00000041138.2
elaC homolog 1 (E. coli)
chr19_-_47837378 0.06 ENSMUST00000160247.1
WD repeat domain 96
chr12_-_81485073 0.05 ENSMUST00000166723.1
ENSMUST00000110340.2
ENSMUST00000168463.1
ENSMUST00000169124.1
ENSMUST00000002757.4
cytochrome c oxidase assembly protein 16
chrX_-_147429189 0.05 ENSMUST00000033646.2
interleukin 13 receptor, alpha 2
chr5_-_149015806 0.05 ENSMUST00000133243.1
predicted gene 15411
chr11_-_99351086 0.04 ENSMUST00000017732.2
keratin 27
chr17_+_29274078 0.04 ENSMUST00000149405.2
cDNA sequence BC004004
chr11_-_98018308 0.04 ENSMUST00000107561.2
calcium channel, voltage-dependent, beta 1 subunit
chr1_-_150392719 0.04 ENSMUST00000006167.6
ENSMUST00000094477.2
ENSMUST00000097547.3
cDNA sequence BC003331
chr10_-_13324250 0.03 ENSMUST00000105543.1
phosphatase and actin regulator 2
chr3_-_146495115 0.03 ENSMUST00000093951.2
spermatogenesis associated 1
chr9_-_42457594 0.03 ENSMUST00000125995.1
tubulin folding cofactor E-like
chr10_-_13324160 0.03 ENSMUST00000105545.4
phosphatase and actin regulator 2
chr4_+_65124174 0.02 ENSMUST00000084501.3
pregnancy-associated plasma protein A
chr10_+_123264076 0.02 ENSMUST00000050756.7
family with sequence similarity 19, member A2
chr14_+_59201418 0.02 ENSMUST00000140136.2
ENSMUST00000142326.1
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr13_+_23782572 0.02 ENSMUST00000074067.2
tripartite motif-containing 38
chr7_+_102223021 0.02 ENSMUST00000156529.1
ENSMUST00000138479.1
ENSMUST00000126914.1
ENSMUST00000033292.7
ENSMUST00000146559.1
post-GPI attachment to proteins 2
chr19_-_8131982 0.01 ENSMUST00000065651.4
solute carrier family 22, member 28
chr7_+_6222278 0.01 ENSMUST00000072662.5
ENSMUST00000155314.1
zinc finger and SCAN domain containing 5B
chr2_-_126500631 0.01 ENSMUST00000129187.1
ATPase, class I, type 8B, member 4
chr10_+_69533761 0.00 ENSMUST00000182884.1
ankyrin 3, epithelial

Network of associatons between targets according to the STRING database.

First level regulatory network of Arid3a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0050883 regulation of sulfur amino acid metabolic process(GO:0031335) musculoskeletal movement, spinal reflex action(GO:0050883)
0.2 0.9 GO:0072272 proximal/distal pattern formation involved in metanephric nephron development(GO:0072272)
0.2 1.6 GO:0000255 allantoin metabolic process(GO:0000255)
0.2 0.8 GO:1905150 stress granule disassembly(GO:0035617) plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386) regulation of voltage-gated sodium channel activity(GO:1905150)
0.1 0.4 GO:1901074 regulation of engulfment of apoptotic cell(GO:1901074)
0.1 0.4 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) cellular response to fructose stimulus(GO:0071332)
0.1 0.5 GO:0061762 CAMKK-AMPK signaling cascade(GO:0061762)
0.1 0.2 GO:0015755 fructose transport(GO:0015755)
0.1 0.5 GO:0010940 positive regulation of necrotic cell death(GO:0010940)
0.1 0.5 GO:0038018 Wnt receptor catabolic process(GO:0038018)
0.1 0.3 GO:0006068 ethanol catabolic process(GO:0006068)
0.1 0.3 GO:0038161 prolactin signaling pathway(GO:0038161)
0.0 0.2 GO:0032385 positive regulation of intracellular lipid transport(GO:0032379) positive regulation of intracellular sterol transport(GO:0032382) positive regulation of intracellular cholesterol transport(GO:0032385) lipid hydroperoxide transport(GO:1901373)
0.0 0.3 GO:1990592 protein polyufmylation(GO:1990564) protein K69-linked ufmylation(GO:1990592)
0.0 1.8 GO:0045838 positive regulation of membrane potential(GO:0045838)
0.0 0.2 GO:0042699 follicle-stimulating hormone signaling pathway(GO:0042699)
0.0 0.2 GO:0021886 hypothalamus gonadotrophin-releasing hormone neuron differentiation(GO:0021886) hypothalamus gonadotrophin-releasing hormone neuron development(GO:0021888)
0.0 0.7 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.1 GO:0010966 regulation of phosphate transport(GO:0010966)
0.0 0.1 GO:0035063 nuclear speck organization(GO:0035063)
0.0 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.1 GO:1903416 response to glycoside(GO:1903416)
0.0 0.1 GO:0033015 porphyrin-containing compound catabolic process(GO:0006787) tetrapyrrole catabolic process(GO:0033015) heme catabolic process(GO:0042167) pigment catabolic process(GO:0046149)
0.0 0.3 GO:1902187 negative regulation of viral release from host cell(GO:1902187)
0.0 0.1 GO:0042780 tRNA 3'-end processing(GO:0042780)
0.0 0.2 GO:0090161 Golgi ribbon formation(GO:0090161)
0.0 0.4 GO:0040023 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023)
0.0 1.6 GO:0060349 bone morphogenesis(GO:0060349)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0070195 growth hormone receptor complex(GO:0070195)
0.1 1.9 GO:0043196 varicosity(GO:0043196)
0.0 0.3 GO:0036195 muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)
0.0 0.8 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.1 GO:0031417 NatC complex(GO:0031417)
0.0 0.5 GO:0020003 symbiont-containing vacuole(GO:0020003)
0.0 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.3 GO:0045179 apical cortex(GO:0045179)
0.0 0.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.9 GO:0005891 voltage-gated calcium channel complex(GO:0005891)
0.0 0.2 GO:0002177 manchette(GO:0002177)
0.0 0.2 GO:0031315 extrinsic component of mitochondrial outer membrane(GO:0031315)
0.0 0.4 GO:0001891 phagocytic cup(GO:0001891)
0.0 0.2 GO:0031143 pseudopodium(GO:0031143)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0004903 growth hormone receptor activity(GO:0004903)
0.2 1.9 GO:0051429 corticotropin-releasing hormone receptor binding(GO:0051429)
0.1 0.4 GO:0030226 apolipoprotein receptor activity(GO:0030226) apolipoprotein A-I receptor activity(GO:0034188) phosphatidylserine-translocating ATPase activity(GO:0090556)
0.1 0.8 GO:0099609 microtubule lateral binding(GO:0099609)
0.1 0.3 GO:0071568 UFM1 transferase activity(GO:0071568)
0.1 0.2 GO:0031896 V2 vasopressin receptor binding(GO:0031896)
0.1 0.3 GO:0004062 aryl sulfotransferase activity(GO:0004062)
0.1 0.3 GO:0004925 prolactin receptor activity(GO:0004925)
0.1 0.9 GO:0008331 high voltage-gated calcium channel activity(GO:0008331)
0.0 0.2 GO:0033814 propanoyl-CoA C-acyltransferase activity(GO:0033814) propionyl-CoA C2-trimethyltridecanoyltransferase activity(GO:0050632) phosphatidylethanolamine transporter activity(GO:1904121)
0.0 0.5 GO:0051434 BH3 domain binding(GO:0051434)
0.0 0.3 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.0 0.2 GO:0070287 ferritin receptor activity(GO:0070287)
0.0 0.3 GO:0097642 calcitonin family receptor activity(GO:0097642)
0.0 0.1 GO:0004074 biliverdin reductase activity(GO:0004074)
0.0 0.4 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 0.4 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.0 0.3 GO:0005078 MAP-kinase scaffold activity(GO:0005078)
0.0 0.1 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 1.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.2 GO:0005536 glucose binding(GO:0005536)
0.0 0.5 GO:0005109 frizzled binding(GO:0005109)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.7 PID NCADHERIN PATHWAY N-cadherin signaling events
0.0 0.3 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0 0.1 ST IL 13 PATHWAY Interleukin 13 (IL-13) Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.9 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.1 1.6 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.0 0.4 REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA Genes involved in Activation of Chaperone Genes by ATF6-alpha
0.0 0.8 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.0 0.3 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules
0.0 0.7 REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.0 0.3 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.0 0.4 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.2 REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS Genes involved in Facilitative Na+-independent glucose transporters
0.0 0.1 REACTOME DEFENSINS Genes involved in Defensins
0.0 0.2 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol