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2D miR_HR1_12

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Results for Smad4

Z-value: 1.06

Motif logo

Transcription factors associated with Smad4

Gene Symbol Gene ID Gene Info
ENSMUSG00000024515.7 SMAD family member 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Smad4mm10_v2_chr18_-_73703739_73703806-0.728.2e-03Click!

Activity profile of Smad4 motif

Sorted Z-values of Smad4 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_+_70563435 4.21 ENSMUST00000123330.1
glutamate decarboxylase 1
chr2_+_70562854 3.80 ENSMUST00000130998.1
glutamate decarboxylase 1
chr5_+_137288273 2.84 ENSMUST00000024099.4
ENSMUST00000085934.3
acetylcholinesterase
chr4_-_148500449 2.07 ENSMUST00000030840.3
angiopoietin-like 7
chr8_+_54954728 1.45 ENSMUST00000033915.7
glycoprotein m6a
chr11_-_99986593 1.41 ENSMUST00000105050.2
keratin associated protein 16-1
chr11_-_3931960 1.38 ENSMUST00000109990.1
ENSMUST00000020710.4
ENSMUST00000109989.3
ENSMUST00000109991.1
ENSMUST00000109993.2
transcobalamin 2
chr11_-_3931789 1.31 ENSMUST00000109992.1
ENSMUST00000109988.1
transcobalamin 2
chr3_+_89436699 1.25 ENSMUST00000038942.3
ENSMUST00000130858.1
pre B cell leukemia transcription factor interacting protein 1
chr15_+_102102926 1.21 ENSMUST00000169627.1
ENSMUST00000046144.9
tensin like C1 domain-containing phosphatase
chr3_+_89436736 1.17 ENSMUST00000146630.1
ENSMUST00000145753.1
pre B cell leukemia transcription factor interacting protein 1
chr11_-_95514570 1.12 ENSMUST00000058866.7
neurexophilin 3
chr5_+_30913398 1.06 ENSMUST00000031055.5
elastin microfibril interfacer 1
chr2_-_173276144 1.01 ENSMUST00000139306.1
prostate transmembrane protein, androgen induced 1
chr11_-_4160286 0.99 ENSMUST00000093381.4
ENSMUST00000101626.2
coiled-coil domain containing 157
chr12_-_12941827 0.99 ENSMUST00000043396.7
v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
chr3_-_96220880 0.95 ENSMUST00000090782.3
histone cluster 2, H2ac
chr17_-_28486082 0.88 ENSMUST00000079413.3
FK506 binding protein 5
chr11_-_106160101 0.83 ENSMUST00000045923.3
LIM domain containing 2
chr9_+_59589288 0.81 ENSMUST00000121266.1
ENSMUST00000118164.1
CUGBP, Elav-like family member 6
chrX_+_136707976 0.80 ENSMUST00000055104.5
transcription elongation factor A (SII)-like 1
chr5_+_19907502 0.79 ENSMUST00000101558.3
membrane associated guanylate kinase, WW and PDZ domain containing 2
chr1_-_173367638 0.78 ENSMUST00000005470.4
ENSMUST00000111220.1
cell adhesion molecule 3
chr11_-_106159902 0.77 ENSMUST00000064545.4
LIM domain containing 2
chr11_-_69122589 0.77 ENSMUST00000180487.1
RIKEN cDNA 9130213A22 gene
chr2_+_125136692 0.74 ENSMUST00000099452.2
cortexin 2
chr9_-_14381242 0.74 ENSMUST00000167549.1
endonuclease domain containing 1
chr7_-_27181149 0.72 ENSMUST00000071986.6
ENSMUST00000121848.1
melanoma inhibitory activity
chr13_+_21735055 0.71 ENSMUST00000087714.4
histone cluster 1, H4j
chr11_-_3504766 0.71 ENSMUST00000044507.5
inositol polyphosphate 5-phosphatase J
chr11_-_106160708 0.67 ENSMUST00000106875.1
LIM domain containing 2
chr11_-_103208542 0.64 ENSMUST00000021323.4
ENSMUST00000107026.2
RIKEN cDNA 1700023F06 gene
chr3_+_96221111 0.63 ENSMUST00000090781.6
histone cluster 2, H2be
chr2_+_127247908 0.63 ENSMUST00000035871.8
ENSMUST00000174503.1
ENSMUST00000174288.1
transmembrane protein 127
chr1_+_176814660 0.63 ENSMUST00000056773.8
ENSMUST00000027785.8
serologically defined colon cancer antigen 8
chr7_-_70360593 0.63 ENSMUST00000032768.7
nuclear receptor subfamily 2, group F, member 2
chr14_-_25903100 0.60 ENSMUST00000052286.8
placenta specific 9a
chr17_+_72918298 0.60 ENSMUST00000024857.6
limb-bud and heart
chrX_+_41401476 0.59 ENSMUST00000165288.1
glutamate receptor, ionotropic, AMPA3 (alpha 3)
chr17_-_90088343 0.59 ENSMUST00000173917.1
neurexin I
chr19_+_4097392 0.59 ENSMUST00000174514.1
ENSMUST00000174149.1
CDK2-associated protein 2
chr7_+_128203598 0.57 ENSMUST00000177383.1
integrin, alpha D
chrX_+_99136119 0.57 ENSMUST00000052839.6
ephrin B1
chr7_+_144175513 0.57 ENSMUST00000105900.1
SH3/ankyrin domain gene 2
chr9_+_61373482 0.57 ENSMUST00000160541.1
ENSMUST00000161207.1
ENSMUST00000159630.1
transducin-like enhancer of split 3, homolog of Drosophila E(spl)
chr9_+_61373219 0.55 ENSMUST00000162583.1
ENSMUST00000161993.1
ENSMUST00000160882.1
ENSMUST00000160724.1
ENSMUST00000162973.1
ENSMUST00000159050.1
transducin-like enhancer of split 3, homolog of Drosophila E(spl)
chr19_+_4082473 0.55 ENSMUST00000159148.1
calcium binding protein 2
chr3_+_107101551 0.54 ENSMUST00000038695.1
potassium voltage-gated channel, shaker-related subfamily, member 2
chr2_+_126034967 0.53 ENSMUST00000110442.1
fibroblast growth factor 7
chr2_-_128967725 0.52 ENSMUST00000099385.2
predicted gene 10762
chr2_+_126034647 0.51 ENSMUST00000064794.7
fibroblast growth factor 7
chr13_+_22043189 0.51 ENSMUST00000110452.1
histone cluster 1, H2bj
chr7_+_45215753 0.50 ENSMUST00000033060.6
ENSMUST00000155313.1
ENSMUST00000107801.1
TEA domain family member 2
chrX_-_72274747 0.50 ENSMUST00000064780.3
gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
chr11_+_105975204 0.50 ENSMUST00000001964.7
angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
chr9_+_61373608 0.49 ENSMUST00000161689.1
transducin-like enhancer of split 3, homolog of Drosophila E(spl)
chr6_-_138422898 0.48 ENSMUST00000161450.1
ENSMUST00000163024.1
ENSMUST00000162185.1
LIM domain only 3
chr1_+_162477680 0.48 ENSMUST00000159707.1
predicted gene 10176
chr10_+_91082940 0.48 ENSMUST00000020150.3
IKBKB interacting protein
chr9_+_108953578 0.48 ENSMUST00000112070.1
collagen, type VII, alpha 1
chr1_-_153186447 0.47 ENSMUST00000027753.6
laminin, gamma 2
chr11_-_5261558 0.45 ENSMUST00000020662.8
kringle containing transmembrane protein 1
chr18_-_38918642 0.45 ENSMUST00000040647.4
fibroblast growth factor 1
chr3_-_116968969 0.45 ENSMUST00000143611.1
ENSMUST00000040097.7
palmdelphin
chr10_+_75589363 0.44 ENSMUST00000072217.2
gamma-glutamyltransferase 5
chr17_+_34597852 0.44 ENSMUST00000174496.2
ENSMUST00000015596.3
ENSMUST00000173992.1
advanced glycosylation end product-specific receptor
chr11_-_26591729 0.43 ENSMUST00000109504.1
vaccinia related kinase 2
chr1_+_152399824 0.43 ENSMUST00000044311.8
collagen beta(1-O)galactosyltransferase 2
chr9_+_57940104 0.42 ENSMUST00000043059.7
sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
chr6_-_30693676 0.41 ENSMUST00000169422.1
ENSMUST00000115131.1
ENSMUST00000115130.2
ENSMUST00000031810.8
centrosomal protein 41
chr6_+_113472276 0.41 ENSMUST00000147316.1
interleukin 17 receptor C
chr5_+_111417263 0.41 ENSMUST00000094463.4
meningioma 1
chr12_+_36157124 0.41 ENSMUST00000041640.3
ankyrin repeat and MYND domain containing 2
chr2_+_29869484 0.41 ENSMUST00000047521.6
ENSMUST00000134152.1
cerebral endothelial cell adhesion molecule
chr17_+_24352037 0.40 ENSMUST00000079594.5
ATP-binding cassette, sub-family A (ABC1), member 3
chr9_+_108953597 0.40 ENSMUST00000026740.5
collagen, type VII, alpha 1
chr3_-_116968827 0.40 ENSMUST00000119557.1
palmdelphin
chr2_+_152736244 0.40 ENSMUST00000038368.8
ENSMUST00000109824.1
inhibitor of DNA binding 1
chrX_+_101383726 0.39 ENSMUST00000119190.1
gap junction protein, beta 1
chr12_+_13269111 0.38 ENSMUST00000042953.8
neuroblastoma amplified sequence
chr17_+_75178911 0.38 ENSMUST00000112514.1
latent transforming growth factor beta binding protein 1
chr5_+_117841839 0.37 ENSMUST00000142742.2
nitric oxide synthase 1, neuronal
chr19_-_23448322 0.37 ENSMUST00000036069.6
MAM domain containing 2
chr12_+_76404168 0.36 ENSMUST00000080449.5
heat shock protein 2
chr11_-_49113757 0.36 ENSMUST00000060398.1
olfactory receptor 1396
chr17_+_75178797 0.36 ENSMUST00000112516.1
ENSMUST00000135447.1
latent transforming growth factor beta binding protein 1
chr2_+_120476911 0.35 ENSMUST00000110716.1
ENSMUST00000028748.6
ENSMUST00000090028.5
ENSMUST00000110719.2
calpain 3
chr11_-_89302545 0.35 ENSMUST00000061728.3
noggin
chr4_+_138967112 0.34 ENSMUST00000116094.2
ring finger protein 186
chr16_-_45158183 0.33 ENSMUST00000114600.1
solute carrier family 35, member A5
chr5_+_75574916 0.33 ENSMUST00000144270.1
ENSMUST00000005815.6
kit oncogene
chr11_+_35121126 0.33 ENSMUST00000069837.3
slit homolog 3 (Drosophila)
chr11_+_115420059 0.33 ENSMUST00000103035.3
potassium channel tetramerisation domain containing 2
chr18_-_35498856 0.33 ENSMUST00000025215.8
endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr6_+_116650674 0.33 ENSMUST00000067354.5
ENSMUST00000178241.1
RIKEN cDNA 8430408G22 gene
chrX_+_159708593 0.31 ENSMUST00000080394.6
SH3-domain kinase binding protein 1
chr5_+_19907774 0.31 ENSMUST00000115267.2
membrane associated guanylate kinase, WW and PDZ domain containing 2
chr13_-_23934156 0.31 ENSMUST00000052776.2
histone cluster 1, H2ba
chr10_+_91083036 0.31 ENSMUST00000020149.5
IKBKB interacting protein
chr5_-_24601961 0.30 ENSMUST00000030791.7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
chr5_-_92278155 0.30 ENSMUST00000159345.1
ENSMUST00000113102.3
N-acylethanolamine acid amidase
chr14_-_64949838 0.29 ENSMUST00000067843.3
ENSMUST00000176489.1
ENSMUST00000175905.1
ENSMUST00000022544.7
ENSMUST00000175744.1
ENSMUST00000176128.1
homeobox containing 1
chr9_+_21424984 0.29 ENSMUST00000172482.1
ENSMUST00000174050.1
dynamin 2
chr3_+_63295815 0.29 ENSMUST00000029400.1
membrane metallo endopeptidase
chr15_+_81936753 0.29 ENSMUST00000038757.7
cold shock domain containing C2, RNA binding
chrX_+_151803313 0.29 ENSMUST00000026292.8
HECT, UBA and WWE domain containing 1
chr13_-_22042949 0.29 ENSMUST00000091741.4
histone cluster 1, H2ag
chr7_-_30362772 0.29 ENSMUST00000046351.5
leucine rich repeat and fibronectin type III domain containing 3
chr4_+_133011506 0.28 ENSMUST00000105915.1
ENSMUST00000105916.1
AT hook, DNA binding motif, containing 1
chr17_-_25081138 0.28 ENSMUST00000024984.6
transmembrane protein 204
chr2_+_27079371 0.27 ENSMUST00000091233.6
ADAMTS-like 2
chr6_+_113471427 0.27 ENSMUST00000058300.7
interleukin 17 receptor C
chr7_-_100855403 0.26 ENSMUST00000156855.1
RELT tumor necrosis factor receptor
chr15_-_38300693 0.26 ENSMUST00000074043.5
Kruppel-like factor 10
chr9_-_49798729 0.26 ENSMUST00000166811.2
neural cell adhesion molecule 1
chr11_+_69846610 0.26 ENSMUST00000152566.1
ENSMUST00000108633.2
phospholipid scramblase 3
chr9_-_21852603 0.26 ENSMUST00000034728.7
dedicator of cytokinesis 6
chr1_-_45503282 0.26 ENSMUST00000086430.4
collagen, type V, alpha 2
chrX_-_7898864 0.25 ENSMUST00000154552.1
polyglutamine binding protein 1
chr19_+_4231899 0.25 ENSMUST00000025773.3
polymerase (DNA-directed), delta 4
chr7_-_119895697 0.24 ENSMUST00000059851.6
DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr1_+_162639148 0.24 ENSMUST00000028020.9
myocilin
chr6_-_83775767 0.23 ENSMUST00000014892.6
testis expressed gene 261
chr7_+_117380937 0.23 ENSMUST00000032892.5
xylosyltransferase 1
chr10_-_127534540 0.22 ENSMUST00000095266.2
neurexophilin 4
chr11_-_116110211 0.22 ENSMUST00000106441.1
ENSMUST00000021120.5
tripartite motif-containing 47
chr10_+_80150448 0.22 ENSMUST00000153477.1
midnolin
chr6_-_112388013 0.21 ENSMUST00000060847.5
ssu-2 homolog (C. elegans)
chr11_+_115420138 0.21 ENSMUST00000106533.1
ENSMUST00000123345.1
potassium channel tetramerisation domain containing 2
chr5_+_121795034 0.21 ENSMUST00000162327.1
ataxin 2
chr5_+_64803513 0.20 ENSMUST00000165536.1
Kruppel-like factor 3 (basic)
chr4_+_42950369 0.20 ENSMUST00000084662.5
DnaJ (Hsp40) homolog, subfamily B, member 5
chr11_-_100762928 0.20 ENSMUST00000107360.2
ENSMUST00000055083.3
hypocretin
chr7_+_123377982 0.20 ENSMUST00000033025.5
leucine carboxyl methyltransferase 1
chr6_+_108660772 0.20 ENSMUST00000163617.1
basic helix-loop-helix family, member e40
chr13_-_102958084 0.19 ENSMUST00000099202.3
ENSMUST00000172264.1
microtubule associated serine/threonine kinase family member 4
chr1_-_75232093 0.19 ENSMUST00000180101.1
RIKEN cDNA A630095N17 gene
chr14_+_50944499 0.19 ENSMUST00000178092.1
purine-nucleoside phosphorylase
chr18_-_84086379 0.19 ENSMUST00000060303.8
teashirt zinc finger family member 1
chr5_-_24445166 0.19 ENSMUST00000115043.1
ENSMUST00000115041.1
Fas-activated serine/threonine kinase
chr7_+_101421691 0.18 ENSMUST00000163751.2
ENSMUST00000084894.7
ENSMUST00000166652.1
phosphodiesterase 2A, cGMP-stimulated
chrX_+_150588223 0.17 ENSMUST00000153221.1
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chr1_+_72583245 0.17 ENSMUST00000145868.1
ENSMUST00000133123.1
ENSMUST00000047615.8
SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr15_-_103366763 0.17 ENSMUST00000023128.6
integrin alpha 5 (fibronectin receptor alpha)
chr4_-_115781012 0.16 ENSMUST00000106521.1
testis expressed 38
chr2_+_128967383 0.16 ENSMUST00000110320.2
ENSMUST00000110319.2
zinc finger CCCH type containing 6
chr10_-_109764840 0.15 ENSMUST00000163071.1
neuron navigator 3
chr4_-_119190005 0.15 ENSMUST00000138395.1
ENSMUST00000156746.1
erythroblast membrane-associated protein
chr6_-_72958097 0.15 ENSMUST00000114049.1
thymosin, beta 10
chr4_-_129742275 0.15 ENSMUST00000066257.5
KH domain containing, RNA binding, signal transduction associated 1
chr14_-_54577578 0.14 ENSMUST00000054487.8
ajuba LIM protein
chr1_+_153652943 0.14 ENSMUST00000041776.5
regulator of G-protein signaling 8
chr2_+_96318014 0.14 ENSMUST00000135431.1
ENSMUST00000162807.2
leucine rich repeat containing 4C
chr17_+_32403006 0.14 ENSMUST00000065921.5
RIKEN cDNA A530088E08 gene
chr9_-_45936049 0.14 ENSMUST00000034590.2
transgelin
chrX_-_150812932 0.14 ENSMUST00000131241.1
ENSMUST00000147152.1
ENSMUST00000143843.1
melanoma antigen, family D, 2
chr10_+_90576872 0.13 ENSMUST00000182550.1
ENSMUST00000099364.5
ankyrin repeat and sterile alpha motif domain containing 1B
chr9_+_122888471 0.13 ENSMUST00000063980.6
zinc finger with KRAB and SCAN domains 7
chr10_+_127739516 0.13 ENSMUST00000054287.7
zinc finger and BTB domain containing 39
chr11_-_48816936 0.13 ENSMUST00000140800.1
tripartite motif-containing 41
chrX_-_7898950 0.12 ENSMUST00000115655.1
ENSMUST00000156741.1
polyglutamine binding protein 1
chr15_+_58510037 0.12 ENSMUST00000161028.1
fer-1-like 6 (C. elegans)
chr17_+_34263209 0.12 ENSMUST00000040828.5
histocompatibility 2, class II antigen A, beta 1
chr5_-_24445254 0.11 ENSMUST00000030800.6
Fas-activated serine/threonine kinase
chr6_+_38433913 0.11 ENSMUST00000160583.1
ubinuclein 2
chr6_-_72958465 0.10 ENSMUST00000114050.1
thymosin, beta 10
chr18_-_52529847 0.10 ENSMUST00000171470.1
lysyl oxidase
chr8_-_34146974 0.10 ENSMUST00000033910.8
leptin receptor overlapping transcript-like 1
chr11_+_53433299 0.10 ENSMUST00000018382.6
growth differentiation factor 9
chr15_+_89532816 0.09 ENSMUST00000167173.1
SH3/ankyrin domain gene 3
chrX_+_18162575 0.09 ENSMUST00000044484.6
ENSMUST00000052368.8
lysine (K)-specific demethylase 6A
chr7_-_126897424 0.08 ENSMUST00000120007.1
transmembrane protein 219
chr1_-_54194048 0.08 ENSMUST00000120904.1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr7_+_127485221 0.08 ENSMUST00000048896.6
fibrosin
chr8_-_92356103 0.07 ENSMUST00000034183.3
RIKEN cDNA 4933436C20 gene
chr18_+_57133065 0.06 ENSMUST00000075770.6
multiple EGF-like-domains 10
chr6_-_129451906 0.06 ENSMUST00000037481.7
C-type lectin domain family 1, member a
chr6_+_48929891 0.06 ENSMUST00000031837.7
RIKEN cDNA 1600015I10 gene
chr15_-_89429093 0.06 ENSMUST00000170460.1
choline kinase beta
chr9_-_105521147 0.05 ENSMUST00000176770.1
ENSMUST00000085133.6
ATPase, Ca++-sequestering
chr11_+_73240310 0.05 ENSMUST00000138853.1
transient receptor potential cation channel, subfamily V, member 1
chr10_+_90576708 0.05 ENSMUST00000182430.1
ENSMUST00000182960.1
ENSMUST00000182045.1
ENSMUST00000182083.1
ankyrin repeat and sterile alpha motif domain containing 1B
chr9_+_13621646 0.05 ENSMUST00000034401.8
mastermind like 2 (Drosophila)
chr10_+_90576777 0.05 ENSMUST00000183136.1
ENSMUST00000182595.1
ankyrin repeat and sterile alpha motif domain containing 1B
chr19_+_46328179 0.04 ENSMUST00000026256.2
ENSMUST00000177667.1
F-box and leucine-rich repeat protein 15
chr11_-_103208523 0.04 ENSMUST00000174567.1
RIKEN cDNA 1700023F06 gene
chr9_-_49798905 0.04 ENSMUST00000114476.2
neural cell adhesion molecule 1
chr1_-_133801031 0.04 ENSMUST00000143567.1
ATPase, Ca++ transporting, plasma membrane 4
chr7_-_45870928 0.04 ENSMUST00000146672.1
glutamate receptor, ionotropic, NMDA2D (epsilon 4)
chr10_-_92164666 0.04 ENSMUST00000183123.1
ENSMUST00000182033.1
rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr15_-_93336800 0.04 ENSMUST00000080299.6
YY1 associated factor 2
chr1_+_153891646 0.03 ENSMUST00000050660.4
transmembrane epididymal protein 1
chr6_+_15720654 0.03 ENSMUST00000101663.3
MyoD family inhibitor domain containing
chr14_+_64950037 0.03 ENSMUST00000043914.5
integrator complex subunit 9
chr1_+_177445660 0.02 ENSMUST00000077225.6
zinc finger and BTB domain containing 18
chr5_-_137741102 0.02 ENSMUST00000149512.1
neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
chr7_+_141216626 0.01 ENSMUST00000141804.1
ENSMUST00000148975.1
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr11_+_97663366 0.01 ENSMUST00000044730.5
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
chr7_+_45216671 0.01 ENSMUST00000134420.1
TEA domain family member 2
chr3_+_88607742 0.01 ENSMUST00000175903.1
rho/rac guanine nucleotide exchange factor (GEF) 2

Network of associatons between targets according to the STRING database.

First level regulatory network of Smad4

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 8.0 GO:0009449 gamma-aminobutyric acid biosynthetic process(GO:0009449)
0.6 2.8 GO:0008291 acetylcholine metabolic process(GO:0008291) acetate ester metabolic process(GO:1900619)
0.4 2.7 GO:0015889 cobalamin transport(GO:0015889)
0.3 1.0 GO:0061033 secretion by lung epithelial cell involved in lung growth(GO:0061033)
0.2 1.7 GO:0097118 neuroligin clustering involved in postsynaptic membrane assembly(GO:0097118)
0.2 0.5 GO:2000170 positive regulation of peptidyl-cysteine S-nitrosylation(GO:2000170)
0.1 0.4 GO:1905204 negative regulation of connective tissue replacement(GO:1905204)
0.1 1.0 GO:0010991 negative regulation of SMAD protein complex assembly(GO:0010991)
0.1 0.6 GO:0060849 regulation of transcription involved in lymphatic endothelial cell fate commitment(GO:0060849)
0.1 0.4 GO:0099548 retrograde trans-synaptic signaling by soluble gas(GO:0098923) trans-synaptic signaling by nitric oxide(GO:0099548)
0.1 0.4 GO:0031662 regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031660) positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031662)
0.1 0.4 GO:0070315 G1 to G0 transition involved in cell differentiation(GO:0070315)
0.1 0.3 GO:0060300 regulation of cytokine activity(GO:0060300)
0.1 0.3 GO:1904349 positive regulation of small intestine smooth muscle contraction(GO:1904349)
0.1 0.3 GO:0001928 regulation of exocyst assembly(GO:0001928)
0.1 0.3 GO:1903406 regulation of sodium:potassium-exchanging ATPase activity(GO:1903406)
0.1 0.3 GO:0071492 cellular response to UV-A(GO:0071492)
0.1 0.5 GO:1901509 regulation of endothelial tube morphogenesis(GO:1901509)
0.1 1.0 GO:2000980 regulation of auditory receptor cell differentiation(GO:0045607) regulation of mechanoreceptor differentiation(GO:0045631) regulation of inner ear receptor cell differentiation(GO:2000980)
0.1 0.5 GO:0021631 optic nerve morphogenesis(GO:0021631)
0.1 0.3 GO:0003219 cardiac right ventricle formation(GO:0003219)
0.1 0.4 GO:2000623 regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623)
0.1 0.6 GO:1904672 regulation of somatic stem cell population maintenance(GO:1904672)
0.1 0.3 GO:0070100 negative regulation of chemokine-mediated signaling pathway(GO:0070100)
0.1 0.3 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.1 0.2 GO:0046122 purine deoxyribonucleoside metabolic process(GO:0046122)
0.1 0.2 GO:0014734 skeletal muscle hypertrophy(GO:0014734)
0.1 0.4 GO:1901750 leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750)
0.1 1.5 GO:0071625 vocalization behavior(GO:0071625)
0.0 0.2 GO:0006481 C-terminal protein methylation(GO:0006481)
0.0 0.3 GO:1903026 negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding(GO:1903026)
0.0 0.1 GO:0032241 positive regulation of nucleobase-containing compound transport(GO:0032241)
0.0 0.4 GO:2000659 regulation of interleukin-1-mediated signaling pathway(GO:2000659)
0.0 0.2 GO:0033159 negative regulation of protein import into nucleus, translocation(GO:0033159)
0.0 0.6 GO:0010804 negative regulation of tumor necrosis factor-mediated signaling pathway(GO:0010804)
0.0 0.6 GO:2000035 regulation of stem cell division(GO:2000035)
0.0 0.1 GO:0002343 peripheral B cell selection(GO:0002343) B cell affinity maturation(GO:0002344)
0.0 0.3 GO:0035093 spermatogenesis, exchange of chromosomal proteins(GO:0035093)
0.0 0.4 GO:0060907 positive regulation of macrophage cytokine production(GO:0060907)
0.0 0.2 GO:0060023 soft palate development(GO:0060023)
0.0 0.4 GO:0015868 purine ribonucleotide transport(GO:0015868)
0.0 0.2 GO:0001957 intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.4 GO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
0.0 0.7 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.0 0.2 GO:0033132 negative regulation of glucokinase activity(GO:0033132) negative regulation of hexokinase activity(GO:1903300)
0.0 0.6 GO:1900017 positive regulation of cytokine production involved in inflammatory response(GO:1900017)
0.0 0.2 GO:0051970 negative regulation of transmission of nerve impulse(GO:0051970)
0.0 0.2 GO:0000733 DNA strand renaturation(GO:0000733)
0.0 0.5 GO:0070831 basement membrane assembly(GO:0070831)
0.0 1.1 GO:0070207 protein homotrimerization(GO:0070207)
0.0 0.1 GO:2000870 regulation of progesterone secretion(GO:2000870)
0.0 0.7 GO:0010714 positive regulation of collagen metabolic process(GO:0010714) positive regulation of collagen biosynthetic process(GO:0032967) positive regulation of multicellular organismal metabolic process(GO:0044253)
0.0 0.6 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.1 GO:0014719 skeletal muscle satellite cell activation(GO:0014719)
0.0 0.1 GO:0035331 negative regulation of hippo signaling(GO:0035331)
0.0 0.6 GO:0030903 notochord development(GO:0030903)
0.0 1.5 GO:0003407 neural retina development(GO:0003407)
0.0 0.2 GO:0006003 fructose 2,6-bisphosphate metabolic process(GO:0006003)
0.0 0.0 GO:1901204 regulation of adrenergic receptor signaling pathway involved in heart process(GO:1901204)
0.0 0.2 GO:1900383 regulation of synaptic plasticity by receptor localization to synapse(GO:1900383)
0.0 0.3 GO:0060481 lobar bronchus epithelium development(GO:0060481)
0.0 0.1 GO:0070294 renal sodium ion absorption(GO:0070294)
0.0 1.0 GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157)
0.0 0.2 GO:0010225 response to UV-C(GO:0010225)
0.0 0.5 GO:0007214 gamma-aminobutyric acid signaling pathway(GO:0007214)
0.0 0.6 GO:0048013 ephrin receptor signaling pathway(GO:0048013)
0.0 0.2 GO:0048681 negative regulation of axon regeneration(GO:0048681)
0.0 0.1 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.1 GO:0032468 cellular manganese ion homeostasis(GO:0030026) Golgi calcium ion homeostasis(GO:0032468) manganese ion homeostasis(GO:0055071)
0.0 0.1 GO:0007213 G-protein coupled acetylcholine receptor signaling pathway(GO:0007213)
0.0 0.6 GO:0007032 endosome organization(GO:0007032) negative regulation of TOR signaling(GO:0032007)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.4 GO:0043083 synaptic cleft(GO:0043083)
0.2 0.7 GO:0038045 large latent transforming growth factor-beta complex(GO:0038045)
0.2 8.6 GO:0060077 inhibitory synapse(GO:0060077)
0.2 0.5 GO:0071149 TEAD-2-YAP complex(GO:0071149)
0.2 0.5 GO:0005607 laminin-2 complex(GO:0005607) laminin-5 complex(GO:0005610)
0.1 0.4 GO:0097232 lamellar body membrane(GO:0097232) alveolar lamellar body membrane(GO:0097233)
0.1 0.4 GO:0070939 Dsl1p complex(GO:0070939)
0.1 0.3 GO:0005588 collagen type V trimer(GO:0005588)
0.1 1.1 GO:0036056 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.1 0.2 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.1 0.2 GO:0044302 dentate gyrus mossy fiber(GO:0044302)
0.1 0.2 GO:0043540 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex(GO:0043540)
0.1 0.6 GO:0005883 neurofilament(GO:0005883)
0.1 1.4 GO:0045095 keratin filament(GO:0045095)
0.0 0.4 GO:0036128 CatSper complex(GO:0036128)
0.0 1.8 GO:0008305 integrin complex(GO:0008305)
0.0 0.4 GO:0071598 neuronal ribonucleoprotein granule(GO:0071598)
0.0 0.4 GO:0005766 primary lysosome(GO:0005766) azurophil granule(GO:0042582)
0.0 1.5 GO:0044295 axonal growth cone(GO:0044295)
0.0 0.5 GO:0044224 juxtaparanode region of axon(GO:0044224)
0.0 0.6 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.5 GO:0097225 sperm midpiece(GO:0097225)
0.0 0.3 GO:0071564 npBAF complex(GO:0071564)
0.0 0.2 GO:0043220 Schmidt-Lanterman incisure(GO:0043220)
0.0 0.4 GO:0005614 interstitial matrix(GO:0005614)
0.0 0.8 GO:0031901 early endosome membrane(GO:0031901)
0.0 0.4 GO:0001891 phagocytic cup(GO:0001891)
0.0 0.2 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.8 GO:0000786 nucleosome(GO:0000786)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 8.0 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.7 2.8 GO:0004104 cholinesterase activity(GO:0004104)
0.3 2.7 GO:0031419 cobalamin binding(GO:0031419)
0.3 1.1 GO:0030023 extracellular matrix constituent conferring elasticity(GO:0030023)
0.3 1.0 GO:0050436 microfibril binding(GO:0050436)
0.2 0.7 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.2 0.9 GO:0005111 type 2 fibroblast growth factor receptor binding(GO:0005111)
0.2 1.1 GO:0070699 type II activin receptor binding(GO:0070699)
0.1 0.5 GO:0031711 tripeptidyl-peptidase activity(GO:0008240) bradykinin receptor binding(GO:0031711) metallodipeptidase activity(GO:0070573)
0.1 0.4 GO:0004517 nitric-oxide synthase activity(GO:0004517)
0.1 0.6 GO:0004971 AMPA glutamate receptor activity(GO:0004971)
0.1 0.6 GO:0030368 interleukin-17 receptor activity(GO:0030368)
0.1 0.2 GO:0030158 protein xylosyltransferase activity(GO:0030158)
0.1 0.2 GO:0004731 purine-nucleoside phosphorylase activity(GO:0004731)
0.1 0.2 GO:0036004 GAF domain binding(GO:0036004)
0.1 0.9 GO:0044548 S100 protein binding(GO:0044548)
0.0 0.2 GO:0003880 protein C-terminal carboxyl O-methyltransferase activity(GO:0003880)
0.0 0.4 GO:0036374 glutathione hydrolase activity(GO:0036374)
0.0 0.3 GO:0048495 Roundabout binding(GO:0048495)
0.0 0.6 GO:0097109 neuroligin family protein binding(GO:0097109)
0.0 0.9 GO:0005528 macrolide binding(GO:0005527) FK506 binding(GO:0005528)
0.0 2.1 GO:0050699 WW domain binding(GO:0050699)
0.0 0.2 GO:0032027 myosin light chain binding(GO:0032027)
0.0 0.3 GO:0004716 receptor signaling protein tyrosine kinase activity(GO:0004716)
0.0 0.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.8 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.5 GO:0001972 retinoic acid binding(GO:0001972)
0.0 0.4 GO:0038191 neuropilin binding(GO:0038191)
0.0 0.2 GO:0043426 MRF binding(GO:0043426)
0.0 0.5 GO:0001134 transcription factor activity, transcription factor recruiting(GO:0001134)
0.0 0.6 GO:0001530 lipopolysaccharide binding(GO:0001530)
0.0 0.1 GO:0030160 GKAP/Homer scaffold activity(GO:0030160)
0.0 0.4 GO:0031432 titin binding(GO:0031432)
0.0 0.2 GO:0070095 fructose-6-phosphate binding(GO:0070095)
0.0 0.5 GO:0004890 GABA-A receptor activity(GO:0004890)
0.0 0.4 GO:0051861 glycolipid binding(GO:0051861)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 0.2 GO:0050692 DBD domain binding(GO:0050692)
0.0 0.2 GO:0003720 telomerase activity(GO:0003720) RNA-directed DNA polymerase activity(GO:0003964)
0.0 0.3 GO:0030275 LRR domain binding(GO:0030275)
0.0 0.4 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.0 0.3 GO:0005351 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.0 0.2 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.1 GO:0004103 choline kinase activity(GO:0004103)
0.0 0.8 GO:0046875 ephrin receptor binding(GO:0046875)
0.0 0.1 GO:0015410 manganese-transporting ATPase activity(GO:0015410)
0.0 0.2 GO:0005243 gap junction channel activity(GO:0005243)
0.0 0.6 GO:0035255 ionotropic glutamate receptor binding(GO:0035255)
0.0 0.3 GO:0016922 ligand-dependent nuclear receptor binding(GO:0016922)
0.0 0.3 GO:0017128 phospholipid scramblase activity(GO:0017128)
0.0 2.6 GO:0003714 transcription corepressor activity(GO:0003714)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 SA MMP CYTOKINE CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0 0.5 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions
0.0 2.5 PID ATF2 PATHWAY ATF-2 transcription factor network
0.0 0.7 PID INTEGRIN CS PATHWAY Integrin family cell surface interactions
0.0 1.1 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.0 0.3 PID SYNDECAN 4 PATHWAY Syndecan-4-mediated signaling events
0.0 0.4 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.0 0.5 PID EPHRINB REV PATHWAY Ephrin B reverse signaling
0.0 0.9 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.4 PID IL3 PATHWAY IL3-mediated signaling events
0.0 1.9 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.2 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.0 0.6 PID FGF PATHWAY FGF signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 8.0 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.1 2.9 REACTOME SYNTHESIS OF PC Genes involved in Synthesis of PC
0.1 1.3 REACTOME ACTIVATED POINT MUTANTS OF FGFR2 Genes involved in Activated point mutants of FGFR2
0.0 1.7 REACTOME PACKAGING OF TELOMERE ENDS Genes involved in Packaging Of Telomere Ends
0.0 1.1 REACTOME NEPHRIN INTERACTIONS Genes involved in Nephrin interactions
0.0 1.0 REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING Genes involved in Downregulation of TGF-beta receptor signaling
0.0 0.4 REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING Genes involved in Advanced glycosylation endproduct receptor signaling
0.0 0.6 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.0 0.2 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 1.7 REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION Genes involved in NOTCH1 Intracellular Domain Regulates Transcription
0.0 0.7 REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0 0.4 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.4 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.0 0.3 REACTOME GAP JUNCTION DEGRADATION Genes involved in Gap junction degradation
0.0 0.2 REACTOME PURINE CATABOLISM Genes involved in Purine catabolism
0.0 1.0 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.3 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP
0.0 0.2 REACTOME GAP JUNCTION TRAFFICKING Genes involved in Gap junction trafficking
0.0 0.5 REACTOME VOLTAGE GATED POTASSIUM CHANNELS Genes involved in Voltage gated Potassium channels
0.0 0.3 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation
0.0 0.7 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 0.4 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.4 REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis