2D miR_HR1_12
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Six3
|
ENSMUSG00000038805.9 | sine oculis-related homeobox 3 |
Six1
|
ENSMUSG00000051367.8 | sine oculis-related homeobox 1 |
Six2
|
ENSMUSG00000024134.10 | sine oculis-related homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Six2 | mm10_v2_chr17_-_85688252_85688275 | -0.26 | 4.2e-01 | Click! |
Six1 | mm10_v2_chr12_-_73047179_73047179 | -0.20 | 5.3e-01 | Click! |
Six3 | mm10_v2_chr17_+_85621017_85621031 | -0.16 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_98571004 | 0.93 |
ENSMUST00000023728.6
|
4930415O20Rik
|
RIKEN cDNA 4930415O20 gene |
chr1_+_139454747 | 0.31 |
ENSMUST00000053364.8
ENSMUST00000097554.3 |
Aspm
|
asp (abnormal spindle)-like, microcephaly associated (Drosophila) |
chr2_+_31245801 | 0.21 |
ENSMUST00000000199.7
|
Ncs1
|
neuronal calcium sensor 1 |
chr17_-_40914350 | 0.21 |
ENSMUST00000166343.1
|
Glyatl3
|
glycine-N-acyltransferase-like 3 |
chr14_+_75242287 | 0.17 |
ENSMUST00000022576.8
|
Cpb2
|
carboxypeptidase B2 (plasma) |
chr2_+_127336152 | 0.16 |
ENSMUST00000028846.6
|
Dusp2
|
dual specificity phosphatase 2 |
chr7_+_30232310 | 0.16 |
ENSMUST00000108193.1
ENSMUST00000108192.1 |
Polr2i
|
polymerase (RNA) II (DNA directed) polypeptide I |
chr3_-_37724321 | 0.15 |
ENSMUST00000108105.1
ENSMUST00000079755.4 ENSMUST00000099128.1 |
Gm5148
|
predicted gene 5148 |
chr7_+_30231884 | 0.15 |
ENSMUST00000019882.9
|
Polr2i
|
polymerase (RNA) II (DNA directed) polypeptide I |
chr19_-_44135816 | 0.14 |
ENSMUST00000026218.5
|
Cwf19l1
|
CWF19-like 1, cell cycle control (S. pombe) |
chr14_+_57798182 | 0.13 |
ENSMUST00000111269.1
|
Sap18
|
Sin3-associated polypeptide 18 |
chr6_+_123123313 | 0.13 |
ENSMUST00000041779.6
|
Clec4a2
|
C-type lectin domain family 4, member a2 |
chrX_-_142966709 | 0.13 |
ENSMUST00000041317.2
|
Ammecr1
|
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 |
chr1_-_65123108 | 0.11 |
ENSMUST00000050047.3
ENSMUST00000148020.1 |
D630023F18Rik
|
RIKEN cDNA D630023F18 gene |
chr10_+_23949516 | 0.11 |
ENSMUST00000045152.4
|
Taar3
|
trace amine-associated receptor 3 |
chr5_+_138820080 | 0.11 |
ENSMUST00000179205.1
|
Gm5294
|
predicted gene 5294 |
chr7_+_43690418 | 0.11 |
ENSMUST00000056329.6
|
Klk14
|
kallikrein related-peptidase 14 |
chr6_+_123123423 | 0.10 |
ENSMUST00000032248.7
|
Clec4a2
|
C-type lectin domain family 4, member a2 |
chr15_-_82244716 | 0.09 |
ENSMUST00000089155.4
ENSMUST00000089157.3 |
Cenpm
|
centromere protein M |
chr13_+_104229366 | 0.09 |
ENSMUST00000022227.6
|
Cenpk
|
centromere protein K |
chr7_-_101903783 | 0.08 |
ENSMUST00000106969.1
|
Tomt
|
transmembrane O-methyltransferase |
chr1_+_136467958 | 0.07 |
ENSMUST00000047817.6
|
Kif14
|
kinesin family member 14 |
chr7_-_30232186 | 0.07 |
ENSMUST00000006254.5
|
Tbcb
|
tubulin folding cofactor B |
chr7_-_80115294 | 0.07 |
ENSMUST00000107384.3
|
Idh2
|
isocitrate dehydrogenase 2 (NADP+), mitochondrial |
chr14_+_55765956 | 0.07 |
ENSMUST00000057569.3
|
Ltb4r1
|
leukotriene B4 receptor 1 |
chr9_+_65141154 | 0.06 |
ENSMUST00000034961.4
|
Igdcc3
|
immunoglobulin superfamily, DCC subclass, member 3 |
chr19_-_23075853 | 0.06 |
ENSMUST00000181623.1
|
C330002G04Rik
|
RIKEN cDNA C330002G04 gene |
chr6_-_52218686 | 0.06 |
ENSMUST00000134367.2
|
Hoxa7
|
homeobox A7 |
chr15_+_82252397 | 0.06 |
ENSMUST00000136948.1
|
1500009C09Rik
|
RIKEN cDNA 1500009C09 gene |
chr8_-_4275886 | 0.06 |
ENSMUST00000003029.7
|
Timm44
|
translocase of inner mitochondrial membrane 44 |
chr8_+_69832633 | 0.06 |
ENSMUST00000131637.2
ENSMUST00000081503.6 |
Pbx4
|
pre B cell leukemia homeobox 4 |
chr17_-_53539411 | 0.05 |
ENSMUST00000056198.3
|
Pp2d1
|
protein phosphatase 2C-like domain containing 1 |
chr10_-_128180265 | 0.05 |
ENSMUST00000099139.1
|
Rbms2
|
RNA binding motif, single stranded interacting protein 2 |
chr15_-_75894474 | 0.05 |
ENSMUST00000023237.6
|
Naprt1
|
nicotinate phosphoribosyltransferase domain containing 1 |
chr7_-_119459266 | 0.05 |
ENSMUST00000033255.5
|
Gp2
|
glycoprotein 2 (zymogen granule membrane) |
chr2_+_131491764 | 0.05 |
ENSMUST00000028806.5
ENSMUST00000110179.2 ENSMUST00000110189.2 ENSMUST00000110182.2 ENSMUST00000110183.2 ENSMUST00000110186.2 ENSMUST00000110188.1 |
Smox
|
spermine oxidase |
chr6_+_38534823 | 0.05 |
ENSMUST00000019833.4
|
1110001J03Rik
|
RIKEN cDNA 1110001J03 gene |
chr5_+_21543525 | 0.04 |
ENSMUST00000035651.4
|
Lrrc17
|
leucine rich repeat containing 17 |
chr9_+_32393963 | 0.04 |
ENSMUST00000172015.1
|
Kcnj1
|
potassium inwardly-rectifying channel, subfamily J, member 1 |
chr11_-_9039585 | 0.04 |
ENSMUST00000043377.5
|
Sun3
|
Sad1 and UNC84 domain containing 3 |
chr6_-_115675871 | 0.04 |
ENSMUST00000112949.1
|
Raf1
|
v-raf-leukemia viral oncogene 1 |
chr3_-_85722474 | 0.04 |
ENSMUST00000119077.1
|
Fam160a1
|
family with sequence similarity 160, member A1 |
chr8_+_84831522 | 0.04 |
ENSMUST00000036734.5
|
Gadd45gip1
|
growth arrest and DNA-damage-inducible, gamma interacting protein 1 |
chr7_+_131032061 | 0.04 |
ENSMUST00000084509.3
|
Dmbt1
|
deleted in malignant brain tumors 1 |
chr17_+_35241838 | 0.04 |
ENSMUST00000173731.1
|
Ddx39b
|
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B |
chr17_+_56717759 | 0.04 |
ENSMUST00000002452.6
|
Ndufa11
|
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 |
chr13_-_74292297 | 0.04 |
ENSMUST00000109640.1
ENSMUST00000022059.7 |
Ahrr
|
aryl-hydrocarbon receptor repressor |
chr7_-_126676428 | 0.04 |
ENSMUST00000106373.1
|
Sult1a1
|
sulfotransferase family 1A, phenol-preferring, member 1 |
chr8_-_106573461 | 0.03 |
ENSMUST00000073722.5
|
Gm10073
|
predicted pseudogene 10073 |
chr11_-_69695521 | 0.03 |
ENSMUST00000181261.1
|
Tnfsf12
|
tumor necrosis factor (ligand) superfamily, member 12 |
chr12_+_84773262 | 0.03 |
ENSMUST00000021667.5
|
Isca2
|
iron-sulfur cluster assembly 2 homolog (S. cerevisiae) |
chr10_-_78487842 | 0.03 |
ENSMUST00000069431.4
|
Gm9978
|
predicted gene 9978 |
chr11_-_99230998 | 0.03 |
ENSMUST00000103133.3
|
Smarce1
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 |
chr7_+_30977043 | 0.03 |
ENSMUST00000058093.4
|
Fam187b
|
family with sequence similarity 187, member B |
chr14_+_57798156 | 0.03 |
ENSMUST00000128764.1
|
Sap18
|
Sin3-associated polypeptide 18 |
chr10_+_24595623 | 0.03 |
ENSMUST00000176228.1
ENSMUST00000129142.1 |
Ctgf
|
connective tissue growth factor |
chr1_-_59094885 | 0.03 |
ENSMUST00000097080.3
|
Als2cr11
|
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human) |
chr16_-_11203259 | 0.03 |
ENSMUST00000119953.1
|
Rsl1d1
|
ribosomal L1 domain containing 1 |
chr4_-_43030440 | 0.03 |
ENSMUST00000135660.1
|
Stoml2
|
stomatin (Epb7.2)-like 2 |
chr5_+_104046869 | 0.02 |
ENSMUST00000031250.7
|
Nudt9
|
nudix (nucleoside diphosphate linked moiety X)-type motif 9 |
chr19_+_8764934 | 0.02 |
ENSMUST00000184663.1
|
Nxf1
|
nuclear RNA export factor 1 |
chr7_-_100855403 | 0.02 |
ENSMUST00000156855.1
|
Relt
|
RELT tumor necrosis factor receptor |
chr17_-_36951636 | 0.02 |
ENSMUST00000040402.7
ENSMUST00000174711.1 |
Ppp1r11
|
protein phosphatase 1, regulatory (inhibitor) subunit 11 |
chr3_+_94398517 | 0.02 |
ENSMUST00000050975.3
|
Lingo4
|
leucine rich repeat and Ig domain containing 4 |
chr19_+_46341118 | 0.02 |
ENSMUST00000128041.1
|
Tmem180
|
transmembrane protein 180 |
chr4_-_116651644 | 0.02 |
ENSMUST00000030455.8
|
Akr1a1
|
aldo-keto reductase family 1, member A1 (aldehyde reductase) |
chr5_+_140607334 | 0.02 |
ENSMUST00000031555.1
|
Lfng
|
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
chr19_-_55315980 | 0.01 |
ENSMUST00000076891.5
|
Zdhhc6
|
zinc finger, DHHC domain containing 6 |
chrX_-_167102059 | 0.01 |
ENSMUST00000146929.1
|
Gm15232
|
predicted gene 15232 |
chr16_+_22920222 | 0.01 |
ENSMUST00000023587.4
ENSMUST00000116625.2 |
Fetub
|
fetuin beta |
chr17_+_35241746 | 0.01 |
ENSMUST00000068056.5
ENSMUST00000174757.1 |
Ddx39b
|
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B |
chr16_-_45724600 | 0.01 |
ENSMUST00000096057.4
|
Tagln3
|
transgelin 3 |
chr5_-_106926245 | 0.01 |
ENSMUST00000117588.1
|
Hfm1
|
HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) |
chr2_+_117249725 | 0.01 |
ENSMUST00000028825.4
|
Fam98b
|
family with sequence similarity 98, member B |
chr9_+_106222598 | 0.01 |
ENSMUST00000062241.9
|
Tlr9
|
toll-like receptor 9 |
chr19_+_55316313 | 0.01 |
ENSMUST00000095950.2
|
Vti1a
|
vesicle transport through interaction with t-SNAREs 1A |
chr4_-_32950813 | 0.01 |
ENSMUST00000084750.1
ENSMUST00000084748.2 |
Ankrd6
|
ankyrin repeat domain 6 |
chr7_-_141168671 | 0.01 |
ENSMUST00000106033.3
|
Rnh1
|
ribonuclease/angiogenin inhibitor 1 |
chr1_-_119504736 | 0.01 |
ENSMUST00000004565.8
|
Ralb
|
v-ral simian leukemia viral oncogene homolog B (ras related) |
chr1_+_165485168 | 0.01 |
ENSMUST00000111440.1
ENSMUST00000027852.8 ENSMUST00000111439.1 |
Adcy10
|
adenylate cyclase 10 |
chr1_-_153851189 | 0.01 |
ENSMUST00000059607.6
|
5830403L16Rik
|
RIKEN cDNA 5830403L16 gene |
chr9_+_119341487 | 0.00 |
ENSMUST00000175743.1
ENSMUST00000176397.1 |
Acaa1a
|
acetyl-Coenzyme A acyltransferase 1A |
chr15_+_38661904 | 0.00 |
ENSMUST00000022904.6
|
Atp6v1c1
|
ATPase, H+ transporting, lysosomal V1 subunit C1 |
chr7_+_87803815 | 0.00 |
ENSMUST00000125009.1
ENSMUST00000155358.1 |
Grm5
|
glutamate receptor, metabotropic 5 |
chr6_+_48537560 | 0.00 |
ENSMUST00000040361.5
|
Atp6v0e2
|
ATPase, H+ transporting, lysosomal V0 subunit E2 |
chr1_+_60746358 | 0.00 |
ENSMUST00000027165.2
|
Cd28
|
CD28 antigen |
chr8_-_22653406 | 0.00 |
ENSMUST00000033938.5
|
Polb
|
polymerase (DNA directed), beta |
chr2_-_119029359 | 0.00 |
ENSMUST00000110833.1
|
Ccdc32
|
coiled-coil domain containing 32 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0001193 | maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193) |
0.1 | 0.1 | GO:1990773 | regulation of matrix metallopeptidase secretion(GO:1904464) matrix metallopeptidase secretion(GO:1990773) |
0.1 | 0.3 | GO:0051661 | maintenance of centrosome location(GO:0051661) |
0.1 | 0.2 | GO:0003331 | regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) |
0.0 | 0.1 | GO:0033624 | negative regulation of integrin activation(GO:0033624) |
0.0 | 0.0 | GO:0071550 | death-inducing signaling complex assembly(GO:0071550) |
0.0 | 0.1 | GO:0042424 | catechol-containing compound catabolic process(GO:0019614) catecholamine catabolic process(GO:0042424) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0036449 | microtubule minus-end(GO:0036449) |
0.0 | 0.2 | GO:0061574 | ASAP complex(GO:0061574) |
0.0 | 0.3 | GO:0005665 | DNA-directed RNA polymerase II, core complex(GO:0005665) |
0.0 | 0.2 | GO:0031045 | dense core granule(GO:0031045) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0016206 | catechol O-methyltransferase activity(GO:0016206) |
0.0 | 0.1 | GO:0004450 | isocitrate dehydrogenase (NADP+) activity(GO:0004450) |
0.0 | 0.1 | GO:0004974 | leukotriene receptor activity(GO:0004974) |
0.0 | 0.0 | GO:0052901 | polyamine oxidase activity(GO:0046592) spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901) |
0.0 | 0.1 | GO:0001594 | trace-amine receptor activity(GO:0001594) |
0.0 | 0.2 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
0.0 | 0.1 | GO:0030621 | U4 snRNA binding(GO:0030621) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME VIRAL MESSENGER RNA SYNTHESIS | Genes involved in Viral Messenger RNA Synthesis |