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2D miR_HR1_12

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Results for Zic3

Z-value: 0.50

Motif logo

Transcription factors associated with Zic3

Gene Symbol Gene ID Gene Info
ENSMUSG00000067860.5 zinc finger protein of the cerebellum 3

Activity profile of Zic3 motif

Sorted Z-values of Zic3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_103773592 0.75 ENSMUST00000078869.5
serine (or cysteine) peptidase inhibitor, clade A, member 1D
chr7_-_4778141 0.70 ENSMUST00000094892.5
interleukin 11
chr9_-_44721383 0.67 ENSMUST00000148929.1
ENSMUST00000123406.1
pleckstrin homology-like domain, family B, member 1
chr11_+_72042455 0.56 ENSMUST00000021164.3
family with sequence similarity 64, member A
chrX_+_73639414 0.51 ENSMUST00000019701.8
dual specificity phosphatase 9
chr14_-_37098211 0.51 ENSMUST00000022337.9
cadherin-related family member 1
chr3_+_134828993 0.50 ENSMUST00000029822.4
tachykinin receptor 3
chr2_-_146511899 0.48 ENSMUST00000131824.1
Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr11_-_34833631 0.48 ENSMUST00000093191.2
spindle apparatus coiled-coil protein 1
chr11_+_50237002 0.48 ENSMUST00000180443.1
predicted gene, 26542
chr7_-_48881032 0.46 ENSMUST00000058745.8
E2F transcription factor 8
chr18_-_74064899 0.45 ENSMUST00000159162.1
ENSMUST00000091851.3
mitogen-activated protein kinase 4
chr9_-_110645328 0.44 ENSMUST00000149089.1
neurobeachin-like 2
chr4_+_52439235 0.42 ENSMUST00000117280.1
ENSMUST00000102915.3
ENSMUST00000142227.1
structural maintenance of chromosomes 2
chr10_+_40883819 0.41 ENSMUST00000105509.1
WAS protein family, member 1
chr6_-_87981482 0.41 ENSMUST00000056403.5
H1 histone family, member X
chr5_-_138171248 0.40 ENSMUST00000153867.1
minichromosome maintenance deficient 7 (S. cerevisiae)
chr16_-_32810477 0.39 ENSMUST00000179384.2
predicted gene 933
chr5_-_138170992 0.39 ENSMUST00000139983.1
minichromosome maintenance deficient 7 (S. cerevisiae)
chr12_+_3806513 0.37 ENSMUST00000172719.1
DNA methyltransferase 3A
chr17_-_84790517 0.37 ENSMUST00000112308.2
leucine-rich PPR-motif containing
chr16_-_89960815 0.34 ENSMUST00000002588.3
T cell lymphoma invasion and metastasis 1
chr14_+_54632329 0.34 ENSMUST00000173083.1
predicted gene, 20726
chr7_+_127800604 0.33 ENSMUST00000046863.5
ENSMUST00000106272.1
ENSMUST00000139068.1
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr13_-_95891905 0.33 ENSMUST00000068603.6
IQ motif containing GTPase activating protein 2
chr5_-_20882072 0.33 ENSMUST00000118174.1
putative homeodomain transcription factor 2
chr18_-_61400363 0.32 ENSMUST00000063307.5
ENSMUST00000075299.6
peroxisome proliferative activated receptor, gamma, coactivator 1 beta
chrX_-_167382747 0.32 ENSMUST00000026839.4
phosphoribosyl pyrophosphate synthetase 2
chr16_+_37011758 0.32 ENSMUST00000071452.5
ENSMUST00000054034.6
polymerase (DNA directed), theta
chr4_-_136956784 0.31 ENSMUST00000030420.8
Eph receptor A8
chr2_+_129100995 0.31 ENSMUST00000103205.4
ENSMUST00000028874.7
polymerase (RNA) I polypeptide B
chr14_+_31217850 0.30 ENSMUST00000090180.2
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
chr14_+_3449379 0.30 ENSMUST00000096168.5
predicted gene 10408
chr2_-_122369130 0.29 ENSMUST00000151130.1
ENSMUST00000125826.1
Src homology 2 domain containing F
chr8_-_18950932 0.29 ENSMUST00000055503.5
ENSMUST00000095438.3
X Kell blood group precursor-related family, member 5
chr2_+_85037212 0.28 ENSMUST00000077798.6
structure specific recognition protein 1
chr7_+_96211656 0.28 ENSMUST00000107165.1
teneurin transmembrane protein 4
chr9_-_44251464 0.26 ENSMUST00000034618.4
PDZ domain containing 3
chr15_-_102366314 0.26 ENSMUST00000078508.5
Sp7 transcription factor 7
chr1_-_64121389 0.26 ENSMUST00000055001.3
Kruppel-like factor 7 (ubiquitous)
chr1_-_191907527 0.25 ENSMUST00000069573.5
RIKEN cDNA 1700034H15 gene
chr19_+_7268296 0.25 ENSMUST00000066646.4
REST corepressor 2
chr9_-_123678782 0.24 ENSMUST00000170591.1
ENSMUST00000171647.1
solute carrier family 6 (neurotransmitter transporter), member 20A
chr14_-_55116935 0.24 ENSMUST00000022819.5
junctophilin 4
chr2_+_55437100 0.24 ENSMUST00000112633.2
ENSMUST00000112632.1
potassium inwardly-rectifying channel, subfamily J, member 3
chr14_+_121035194 0.24 ENSMUST00000135010.1
FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
chrX_+_71364901 0.23 ENSMUST00000132837.1
myotubularin related protein 1
chr6_-_124813065 0.23 ENSMUST00000149610.2
triosephosphate isomerase 1
chr2_-_160872829 0.23 ENSMUST00000176141.1
zinc fingers and homeoboxes 3
chr17_+_86963279 0.22 ENSMUST00000139344.1
ras homolog gene family, member Q
chr8_+_4243264 0.22 ENSMUST00000110996.1
mitogen-activated protein kinase kinase 7
chr8_-_122460666 0.22 ENSMUST00000006762.5
snail homolog 3 (Drosophila)
chr2_-_160872985 0.21 ENSMUST00000109460.1
ENSMUST00000127201.1
zinc fingers and homeoboxes 3
chrX_+_137049586 0.21 ENSMUST00000047852.7
family with sequence similarity 199, X-linked
chr13_-_81633119 0.21 ENSMUST00000126444.1
ENSMUST00000128585.1
ENSMUST00000146749.1
ENSMUST00000095585.4
G protein-coupled receptor 98
chr15_-_94404258 0.20 ENSMUST00000035342.4
ENSMUST00000155907.1
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
chr12_-_102704896 0.20 ENSMUST00000178697.1
ENSMUST00000046518.5
inositol 1,3,4-triphosphate 5/6 kinase
chr1_-_177796451 0.20 ENSMUST00000016105.8
adenylosuccinate synthetase, non muscle
chr11_-_100441795 0.20 ENSMUST00000107398.1
5'-nucleotidase, cytosolic IIIB
chr8_-_106136792 0.20 ENSMUST00000146940.1
epithelial splicing regulatory protein 2
chr6_-_71908736 0.20 ENSMUST00000082094.2
pentatricopeptide repeat domain 3
chr9_-_29411736 0.20 ENSMUST00000115236.1
neurotrimin
chr9_-_29412204 0.20 ENSMUST00000115237.1
neurotrimin
chr4_-_41275091 0.20 ENSMUST00000030143.6
ENSMUST00000108068.1
ubiquitin-associated protein 2
chr7_+_105404568 0.19 ENSMUST00000033187.4
cyclic nucleotide gated channel alpha 4
chr11_+_98446826 0.19 ENSMUST00000019456.4
growth factor receptor bound protein 7
chr15_-_76209056 0.19 ENSMUST00000071869.5
ENSMUST00000170915.1
plectin
chr13_-_47105790 0.19 ENSMUST00000129352.1
DEK oncogene (DNA binding)
chr10_+_28074813 0.19 ENSMUST00000166468.1
protein tyrosine phosphatase, receptor type, K
chr3_+_66981352 0.18 ENSMUST00000162036.1
arginine/serine-rich coiled-coil 1
chr18_-_34720269 0.18 ENSMUST00000025224.7
glial cell line derived neurotrophic factor family receptor alpha 3
chr4_+_118620799 0.18 ENSMUST00000030501.8
EBNA1 binding protein 2
chr17_-_32788284 0.18 ENSMUST00000159086.2
zinc finger protein 871
chr9_-_123678873 0.18 ENSMUST00000040960.6
solute carrier family 6 (neurotransmitter transporter), member 20A
chr4_+_108460000 0.18 ENSMUST00000097925.2
zinc finger, CCHC domain containing 11
chr15_-_50890396 0.18 ENSMUST00000185183.1
trichorhinophalangeal syndrome I (human)
chr5_-_52566264 0.18 ENSMUST00000039750.5
leucine-rich repeat LGI family, member 2
chr17_+_83350925 0.18 ENSMUST00000096766.4
ENSMUST00000112363.2
ENSMUST00000049503.8
echinoderm microtubule associated protein like 4
chrX_+_10717451 0.18 ENSMUST00000156321.1
Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chr11_-_120630126 0.17 ENSMUST00000106180.1
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chrX_-_61185558 0.17 ENSMUST00000166381.1
cerebellar degeneration related antigen 1
chr15_-_98953541 0.17 ENSMUST00000097014.5
tubulin, alpha 1A
chr13_+_100651328 0.17 ENSMUST00000022135.8
ENSMUST00000084721.6
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr4_-_16013796 0.17 ENSMUST00000149891.1
oxidative stress induced growth inhibitor family member 2
chr11_-_78497458 0.17 ENSMUST00000108287.3
sterile alpha and HEAT/Armadillo motif containing 1
chr7_-_4812351 0.17 ENSMUST00000079496.7
ubiquitin-conjugating enzyme E2S
chr2_+_121295437 0.17 ENSMUST00000110639.1
microtubule-associated protein 1 A
chr5_-_138171216 0.17 ENSMUST00000147920.1
minichromosome maintenance deficient 7 (S. cerevisiae)
chr9_+_57521232 0.17 ENSMUST00000000090.6
cytochrome c oxidase subunit Va
chr16_-_4077778 0.16 ENSMUST00000006137.8
TNF receptor-associated protein 1
chr10_-_127522428 0.16 ENSMUST00000026470.4
serine hydroxymethyltransferase 2 (mitochondrial)
chr16_-_30388530 0.16 ENSMUST00000100013.2
ENSMUST00000061350.6
ATPase type 13A3
chr9_+_55149364 0.16 ENSMUST00000121677.1
ubiquitin-conjugating enzyme E2Q (putative) 2
chr7_-_19399859 0.16 ENSMUST00000047170.3
ENSMUST00000108459.2
kinesin light chain 3
chr4_+_127172866 0.16 ENSMUST00000106094.2
discs, large (Drosophila) homolog-associated protein 3
chrX_+_71364745 0.16 ENSMUST00000114601.1
ENSMUST00000146213.1
ENSMUST00000015358.1
myotubularin related protein 1
chr8_+_70501116 0.16 ENSMUST00000127983.1
cytokine receptor-like factor 1
chr2_-_103073335 0.16 ENSMUST00000132449.1
ENSMUST00000111183.1
ENSMUST00000011058.2
pyruvate dehydrogenase complex, component X
chr7_-_44257378 0.16 ENSMUST00000107945.1
ENSMUST00000118216.1
acid phosphatase, testicular
chr1_+_92831614 0.16 ENSMUST00000045970.6
glypican 1
chr1_+_72824482 0.16 ENSMUST00000047328.4
insulin-like growth factor binding protein 2
chr15_-_58324161 0.16 ENSMUST00000022985.1
kelch-like 38
chr2_-_103796989 0.16 ENSMUST00000111147.1
cell cycle associated protein 1
chr17_+_84511832 0.15 ENSMUST00000047206.5
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
chr11_+_76945719 0.15 ENSMUST00000125145.1
bleomycin hydrolase
chr13_+_6548154 0.15 ENSMUST00000021611.8
pitrilysin metallepetidase 1
chr10_-_115587739 0.15 ENSMUST00000020350.8
leucine rich repeat containing G protein coupled receptor 5
chr1_+_187609028 0.15 ENSMUST00000110939.1
estrogen-related receptor gamma
chr2_-_54085542 0.15 ENSMUST00000100089.2
reprimo, TP53 dependent G2 arrest mediator candidate
chr10_+_39732364 0.15 ENSMUST00000164763.1
REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
chr17_-_83631892 0.15 ENSMUST00000051482.1
potassium voltage-gated channel, subfamily G, member 3
chr11_-_102316660 0.15 ENSMUST00000146896.2
ENSMUST00000079589.4
upstream binding transcription factor, RNA polymerase I
chr11_+_97029925 0.15 ENSMUST00000021249.4
secernin 2
chr5_+_115279666 0.15 ENSMUST00000040421.4
coenzyme Q5 homolog, methyltransferase (yeast)
chr9_-_110117379 0.15 ENSMUST00000111991.2
ENSMUST00000149199.1
ENSMUST00000035056.7
ENSMUST00000148287.1
ENSMUST00000127744.1
DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr17_-_23586214 0.15 ENSMUST00000115516.3
zinc finger protein 13
chr3_-_53657339 0.15 ENSMUST00000091137.4
Fras1 related extracellular matrix protein 2
chr3_-_108415552 0.14 ENSMUST00000090558.3
cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
chr2_-_151009364 0.14 ENSMUST00000109896.1
ninein-like
chr9_+_107587711 0.14 ENSMUST00000010192.5
interferon-related developmental regulator 2
chr10_+_13966268 0.14 ENSMUST00000015645.4
human immunodeficiency virus type I enhancer binding protein 2
chr7_-_80403315 0.14 ENSMUST00000147150.1
furin (paired basic amino acid cleaving enzyme)
chr2_-_92371039 0.14 ENSMUST00000068586.6
glycosyltransferase-like 1B
chr11_-_102316691 0.14 ENSMUST00000107115.1
ENSMUST00000128016.1
upstream binding transcription factor, RNA polymerase I
chr4_-_68954351 0.14 ENSMUST00000030036.5
bone morphogenic protein/retinoic acid inducible neural specific 1
chr8_+_106211016 0.14 ENSMUST00000109297.1
protein arginine N-methyltransferase 7
chr1_+_91366412 0.14 ENSMUST00000086861.5
family with sequence similarity 132, member B
chr6_+_63255971 0.14 ENSMUST00000159561.1
ENSMUST00000095852.3
glutamate receptor, ionotropic, delta 2
chr9_+_106453838 0.14 ENSMUST00000024260.6
poly(rC) binding protein 4
chr5_+_93093428 0.14 ENSMUST00000074733.7
septin 11
chr2_+_31640037 0.13 ENSMUST00000113470.2
PR domain containing 12
chr1_+_39367816 0.13 ENSMUST00000179954.1
ENSMUST00000178079.1
ENSMUST00000086535.6
ribosomal protein L31
chrX_+_106187100 0.13 ENSMUST00000081593.6
phosphoglycerate kinase 1
chr14_+_25607797 0.13 ENSMUST00000160229.1
zinc finger, MIZ-type containing 1
chr7_+_101317073 0.13 ENSMUST00000163799.2
ENSMUST00000164479.2
START domain containing 10
chr5_-_110779937 0.13 ENSMUST00000112426.1
pseudouridine synthase 1
chr7_+_45684398 0.13 ENSMUST00000107742.2
ENSMUST00000183120.1
netrin 5
chr15_-_80264276 0.13 ENSMUST00000052499.7
ribosomal protein S19 binding protein 1
chr10_-_49788743 0.12 ENSMUST00000105483.1
ENSMUST00000105487.1
glutamate receptor, ionotropic, kainate 2 (beta 2)
chr2_+_103073669 0.12 ENSMUST00000011055.6
APAF1 interacting protein
chr8_-_85080679 0.12 ENSMUST00000093357.5
WD repeat domain containing 83
chr11_-_70229677 0.12 ENSMUST00000153449.1
ENSMUST00000000326.5
B cell CLL/lymphoma 6, member B
chr2_-_92370999 0.12 ENSMUST00000176810.1
ENSMUST00000090582.4
glycosyltransferase-like 1B
chr11_+_97030130 0.12 ENSMUST00000153482.1
secernin 2
chr11_-_78497734 0.12 ENSMUST00000061174.6
sterile alpha and HEAT/Armadillo motif containing 1
chr14_+_54476100 0.12 ENSMUST00000164766.1
ENSMUST00000164697.1
rad and gem related GTP binding protein 2
chr12_+_3572528 0.12 ENSMUST00000173998.1
dystrobrevin, beta
chr2_-_39190687 0.12 ENSMUST00000142872.1
ENSMUST00000038874.5
suppressor of cancer cell invasion
chr13_+_100651607 0.12 ENSMUST00000167256.1
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr2_-_92370968 0.12 ENSMUST00000176774.1
glycosyltransferase-like 1B
chr3_-_137552622 0.12 ENSMUST00000068546.5
predicted gene 4861
chr16_+_20717665 0.11 ENSMUST00000021405.7
polymerase (RNA) II (DNA directed) polypeptide H
chr2_+_29890063 0.11 ENSMUST00000028128.6
outer dense fiber of sperm tails 2
chr10_+_75518042 0.11 ENSMUST00000020397.8
small nuclear ribonucleoprotein D3
chr6_+_7844806 0.11 ENSMUST00000040159.4
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
chr5_+_107437908 0.11 ENSMUST00000094541.2
BTB (POZ) domain containing 8
chr2_-_156111954 0.11 ENSMUST00000059647.5
ENSMUST00000109604.2
ENSMUST00000138068.1
ENSMUST00000128499.1
ENSMUST00000142960.2
ENSMUST00000136296.2
RNA binding motif protein 12
copine I
chr17_+_24720063 0.11 ENSMUST00000170715.1
ENSMUST00000054289.6
ENSMUST00000146867.1
ribosomal protein S2
chr2_-_146511992 0.11 ENSMUST00000109986.2
Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr3_+_87930256 0.11 ENSMUST00000055984.6
interferon stimulated exonuclease gene 20-like 2
chr15_-_85581809 0.11 ENSMUST00000023015.7
wingless-related MMTV integration site 7B
chr2_+_127008711 0.11 ENSMUST00000110394.1
ENSMUST00000002063.8
adaptor-related protein complex AP-4, epsilon 1
chr11_-_48826655 0.11 ENSMUST00000104959.1
predicted gene 12184
chr16_-_91011029 0.11 ENSMUST00000130813.1
synaptojanin 1
chr16_+_32914094 0.11 ENSMUST00000023491.6
ENSMUST00000170899.1
ENSMUST00000171118.1
ENSMUST00000170201.1
ENSMUST00000165616.1
ENSMUST00000135193.2
leucine-rich repeats and calponin homology (CH) domain containing 3
chr11_-_69549108 0.11 ENSMUST00000108659.1
dynein, axonemal, heavy chain 2
chr12_-_76709997 0.11 ENSMUST00000166101.1
spectrin beta, erythrocytic
chr17_-_6961156 0.11 ENSMUST00000063683.6
T cell activation GTPase activating protein 1
chr10_-_43540945 0.11 ENSMUST00000147196.1
ENSMUST00000019932.3
RIKEN cDNA 1700021F05 gene
chr17_+_35135463 0.11 ENSMUST00000173535.1
ENSMUST00000173952.1
BCL2-associated athanogene 6
chr5_+_105732063 0.11 ENSMUST00000154807.1
leucine rich repeat containing 8D
chr13_+_44730726 0.10 ENSMUST00000173704.1
ENSMUST00000044608.7
ENSMUST00000173367.1
jumonji, AT rich interactive domain 2
chr12_+_84316830 0.10 ENSMUST00000045931.10
zinc finger protein 410
chr7_+_127800844 0.10 ENSMUST00000106271.1
ENSMUST00000138432.1
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr10_+_18845071 0.10 ENSMUST00000019998.7
PERP, TP53 apoptosis effector
chr7_-_109439076 0.10 ENSMUST00000106745.2
ENSMUST00000090414.4
serine/threonine kinase 33
chr11_-_120990871 0.10 ENSMUST00000154483.1
casein kinase 1, delta
chr8_-_126475062 0.10 ENSMUST00000170518.1
predicted gene, 17296
chr15_-_79742493 0.10 ENSMUST00000100439.3
Sad1 and UNC84 domain containing 2
chr5_-_99978914 0.10 ENSMUST00000112939.3
ENSMUST00000171786.1
ENSMUST00000072750.6
ENSMUST00000019128.8
ENSMUST00000172361.1
heterogeneous nuclear ribonucleoprotein D
chr2_-_104816696 0.10 ENSMUST00000117237.1
glutamine and serine rich 1
chr18_+_11052487 0.10 ENSMUST00000047762.7
GATA binding protein 6
chr17_+_32659410 0.10 ENSMUST00000165061.1
cytochrome P450, family 4, subfamily f, polypeptide 40
chr17_-_56935388 0.10 ENSMUST00000025053.8
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
chrX_+_10717390 0.10 ENSMUST00000115524.1
ENSMUST00000008179.6
Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chr7_-_132852606 0.10 ENSMUST00000120425.1
methyltransferase like 10
chr6_-_51469836 0.09 ENSMUST00000090002.7
heterogeneous nuclear ribonucleoprotein A2/B1
chr3_-_30509462 0.09 ENSMUST00000173899.1
MDS1 and EVI1 complex locus
chr16_+_48842552 0.09 ENSMUST00000023329.4
resistin like alpha
chr17_-_45549655 0.09 ENSMUST00000180252.1
transmembrane protein 151B
chr2_-_20968526 0.09 ENSMUST00000141298.2
ENSMUST00000125783.2
Rho GTPase activating protein 21
chr8_+_93810832 0.09 ENSMUST00000034198.8
ENSMUST00000125716.1
guanine nucleotide binding protein, alpha O
chr19_-_10881723 0.09 ENSMUST00000144681.1
transmembrane protein 109
chr19_+_6975048 0.09 ENSMUST00000070850.6
protein phosphatase 1, regulatory (inhibitor) subunit 14B
chr9_+_110117703 0.09 ENSMUST00000098355.3
predicted gene 10615
chr5_+_66676098 0.09 ENSMUST00000031131.9
ubiquitin carboxy-terminal hydrolase L1
chr8_-_111522073 0.09 ENSMUST00000034437.6
ENSMUST00000038193.7
WD repeat domain 59
chrX_+_7790012 0.09 ENSMUST00000140540.1
GRIP1 associated protein 1
chr5_-_134456227 0.09 ENSMUST00000111244.1
general transcription factor II I repeat domain-containing 1
chr7_+_78914216 0.09 ENSMUST00000120331.2
interferon-stimulated protein

Network of associatons between targets according to the STRING database.

First level regulatory network of Zic3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877)
0.1 0.3 GO:1900149 positive regulation of Schwann cell migration(GO:1900149)
0.1 0.4 GO:0070889 platelet alpha granule organization(GO:0070889)
0.1 0.4 GO:0035524 proline transmembrane transport(GO:0035524)
0.1 0.6 GO:0060178 regulation of exocyst localization(GO:0060178)
0.1 1.0 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.1 0.3 GO:0060912 cardiac cell fate specification(GO:0060912)
0.1 0.4 GO:0000960 mitochondrial RNA catabolic process(GO:0000957) regulation of mitochondrial RNA catabolic process(GO:0000960)
0.1 0.3 GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.1 0.2 GO:0046166 alditol catabolic process(GO:0019405) glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.1 0.1 GO:1902162 regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902162)
0.1 0.1 GO:1900109 regulation of histone H3-K9 dimethylation(GO:1900109)
0.1 0.7 GO:1904261 regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904259) positive regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904261) basement membrane assembly involved in embryonic body morphogenesis(GO:2001197)
0.1 0.4 GO:1990416 cellular response to brain-derived neurotrophic factor stimulus(GO:1990416)
0.1 0.2 GO:0035519 protein K29-linked ubiquitination(GO:0035519)
0.1 0.2 GO:1901856 negative regulation of cellular respiration(GO:1901856)
0.1 0.2 GO:0090472 dibasic protein processing(GO:0090472)
0.1 0.2 GO:0030200 heparan sulfate proteoglycan catabolic process(GO:0030200)
0.1 0.4 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.2 GO:2001013 epithelial cell proliferation involved in renal tubule morphogenesis(GO:2001013)
0.1 0.1 GO:0032911 negative regulation of transforming growth factor beta1 production(GO:0032911)
0.0 0.4 GO:0035754 B cell chemotaxis(GO:0035754)
0.0 0.4 GO:0044027 hypermethylation of CpG island(GO:0044027)
0.0 0.3 GO:0010694 positive regulation of alkaline phosphatase activity(GO:0010694)
0.0 0.5 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.0 0.4 GO:0007000 nucleolus organization(GO:0007000)
0.0 0.1 GO:0010726 positive regulation of hydrogen peroxide metabolic process(GO:0010726)
0.0 0.1 GO:1904978 regulation of endosome organization(GO:1904978) positive regulation of endosome organization(GO:1904980)
0.0 0.3 GO:1990573 potassium ion import across plasma membrane(GO:1990573)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.2 GO:0033326 cerebrospinal fluid secretion(GO:0033326)
0.0 0.1 GO:1901355 response to rapamycin(GO:1901355)
0.0 0.5 GO:0034501 protein localization to kinetochore(GO:0034501)
0.0 0.2 GO:0070103 regulation of interleukin-6-mediated signaling pathway(GO:0070103)
0.0 0.1 GO:0042376 menaquinone metabolic process(GO:0009233) phylloquinone metabolic process(GO:0042374) phylloquinone catabolic process(GO:0042376) quinone catabolic process(GO:1901662)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0014916 regulation of lung blood pressure(GO:0014916)
0.0 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.0 0.4 GO:2000671 regulation of motor neuron apoptotic process(GO:2000671)
0.0 0.3 GO:0006362 transcription elongation from RNA polymerase I promoter(GO:0006362)
0.0 0.1 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.0 0.1 GO:0001180 transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript(GO:0001180)
0.0 0.1 GO:1901842 negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.0 0.1 GO:1902775 mitochondrial large ribosomal subunit assembly(GO:1902775)
0.0 0.2 GO:1903265 positive regulation of tumor necrosis factor-mediated signaling pathway(GO:1903265)
0.0 0.6 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.0 0.1 GO:0043985 histone H4-R3 methylation(GO:0043985)
0.0 0.1 GO:0016332 establishment or maintenance of polarity of embryonic epithelium(GO:0016332) renal outer medulla development(GO:0072054) inner medullary collecting duct development(GO:0072061)
0.0 0.2 GO:2001032 cell quiescence(GO:0044838) regulation of double-strand break repair via nonhomologous end joining(GO:2001032)
0.0 0.1 GO:0097402 neuroblast migration(GO:0097402)
0.0 0.3 GO:0071372 cellular response to follicle-stimulating hormone stimulus(GO:0071372)
0.0 0.1 GO:1990868 apoptotic process involved in outflow tract morphogenesis(GO:0003275) negative regulation of lymphangiogenesis(GO:1901491) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256) positive regulation of core promoter binding(GO:1904798) response to chemokine(GO:1990868) cellular response to chemokine(GO:1990869)
0.0 0.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.2 GO:0045636 positive regulation of melanocyte differentiation(GO:0045636) positive regulation of neuroepithelial cell differentiation(GO:1902913)
0.0 0.3 GO:0016446 somatic hypermutation of immunoglobulin genes(GO:0016446)
0.0 0.3 GO:0070493 thrombin receptor signaling pathway(GO:0070493)
0.0 0.1 GO:0021526 medial motor column neuron differentiation(GO:0021526)
0.0 0.2 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.0 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.1 GO:0070649 formin-nucleated actin cable assembly(GO:0070649)
0.0 0.1 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.0 0.1 GO:0071651 positive regulation of chemokine (C-C motif) ligand 5 production(GO:0071651)
0.0 0.2 GO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
0.0 0.1 GO:0071918 urea transmembrane transport(GO:0071918)
0.0 0.1 GO:0051684 maintenance of Golgi location(GO:0051684)
0.0 0.1 GO:0007296 vitellogenesis(GO:0007296)
0.0 0.1 GO:1905244 regulation of modification of synaptic structure(GO:1905244)
0.0 0.1 GO:0035360 positive regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035360)
0.0 0.1 GO:0007412 axon target recognition(GO:0007412)
0.0 0.1 GO:0014886 transition between slow and fast fiber(GO:0014886)
0.0 0.1 GO:0000738 DNA catabolic process, exonucleolytic(GO:0000738)
0.0 0.1 GO:0006208 pyrimidine nucleobase catabolic process(GO:0006208) thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
0.0 0.2 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.0 0.1 GO:0002115 store-operated calcium entry(GO:0002115)
0.0 0.1 GO:0016266 O-glycan processing(GO:0016266)
0.0 0.1 GO:0048861 leukemia inhibitory factor signaling pathway(GO:0048861) positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis(GO:0072108)
0.0 0.1 GO:0032901 positive regulation of neurotrophin production(GO:0032901)
0.0 0.0 GO:0000821 regulation of arginine metabolic process(GO:0000821) regulation of nitric oxide mediated signal transduction(GO:0010749) negative regulation of nitric oxide mediated signal transduction(GO:0010751) negative regulation of cellular amino acid metabolic process(GO:0045763)
0.0 0.2 GO:0051967 negative regulation of synaptic transmission, glutamatergic(GO:0051967)
0.0 0.1 GO:0043602 nitrate catabolic process(GO:0043602) nitric oxide catabolic process(GO:0046210) cellular organohalogen metabolic process(GO:0090345) cellular organofluorine metabolic process(GO:0090346)
0.0 0.6 GO:0007026 negative regulation of microtubule depolymerization(GO:0007026) regulation of microtubule depolymerization(GO:0031114)
0.0 0.2 GO:0010839 negative regulation of keratinocyte proliferation(GO:0010839)
0.0 0.0 GO:0019043 establishment of viral latency(GO:0019043)
0.0 0.2 GO:0031581 hemidesmosome assembly(GO:0031581)
0.0 0.3 GO:0060218 hematopoietic stem cell differentiation(GO:0060218)
0.0 0.1 GO:0036515 serotonergic neuron axon guidance(GO:0036515)
0.0 0.1 GO:0044806 G-quadruplex DNA unwinding(GO:0044806)
0.0 0.0 GO:0071922 establishment of sister chromatid cohesion(GO:0034085) cohesin loading(GO:0071921) regulation of cohesin loading(GO:0071922) negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930)
0.0 0.1 GO:0031509 telomeric heterochromatin assembly(GO:0031509) negative regulation of chromosome condensation(GO:1902340)
0.0 0.1 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0060709 glycogen cell differentiation involved in embryonic placenta development(GO:0060709)
0.0 0.2 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.0 0.0 GO:2000384 regulation of ectoderm development(GO:2000383) negative regulation of ectoderm development(GO:2000384)
0.0 0.4 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.2 GO:0006743 ubiquinone metabolic process(GO:0006743)
0.0 0.1 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.0 0.1 GO:0017185 peptidyl-lysine hydroxylation(GO:0017185)
0.0 0.0 GO:0051794 regulation of catagen(GO:0051794)
0.0 0.0 GO:0010724 regulation of definitive erythrocyte differentiation(GO:0010724)
0.0 0.0 GO:0032972 regulation of muscle filament sliding speed(GO:0032972)
0.0 0.1 GO:0046501 protoporphyrinogen IX metabolic process(GO:0046501)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.1 1.0 GO:0042555 MCM complex(GO:0042555)
0.0 0.3 GO:0000125 PCAF complex(GO:0000125)
0.0 0.7 GO:0045180 basal cortex(GO:0045180)
0.0 0.4 GO:0000796 condensin complex(GO:0000796)
0.0 0.2 GO:0070552 BRISC complex(GO:0070552)
0.0 0.2 GO:0097058 CRLF-CLCF1 complex(GO:0097058)
0.0 0.5 GO:0042622 photoreceptor outer segment membrane(GO:0042622)
0.0 0.5 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 0.4 GO:0031209 SCAR complex(GO:0031209)
0.0 0.2 GO:0030314 junctional membrane complex(GO:0030314)
0.0 0.2 GO:0017071 intracellular cyclic nucleotide activated cation channel complex(GO:0017071)
0.0 0.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.3 GO:0060091 kinocilium(GO:0060091)
0.0 0.1 GO:0032983 kainate selective glutamate receptor complex(GO:0032983)
0.0 0.2 GO:0001940 male pronucleus(GO:0001940)
0.0 0.1 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.0 0.3 GO:0031315 extrinsic component of mitochondrial outer membrane(GO:0031315)
0.0 0.1 GO:0005683 U7 snRNP(GO:0005683) pICln-Sm protein complex(GO:0034715)
0.0 0.2 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.0 0.1 GO:0098837 postsynaptic recycling endosome(GO:0098837)
0.0 0.4 GO:0001741 XY body(GO:0001741)
0.0 0.1 GO:0008091 spectrin(GO:0008091)
0.0 0.1 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281) fumarate reductase complex(GO:0045283)
0.0 0.1 GO:0000120 RNA polymerase I transcription factor complex(GO:0000120)
0.0 0.2 GO:0097539 ciliary transition fiber(GO:0097539)
0.0 0.2 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.0 0.5 GO:0032590 dendrite membrane(GO:0032590)
0.0 0.1 GO:0036156 inner dynein arm(GO:0036156)
0.0 0.0 GO:0002111 BRCA2-BRAF35 complex(GO:0002111)
0.0 0.1 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.0 GO:0070436 Grb2-EGFR complex(GO:0070436)
0.0 0.5 GO:0009295 nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0043515 kinetochore binding(GO:0043515)
0.1 0.3 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.1 0.2 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.1 0.3 GO:0001165 RNA polymerase I upstream control element sequence-specific DNA binding(GO:0001165)
0.1 0.2 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 0.2 GO:0070052 collagen V binding(GO:0070052)
0.0 0.4 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.2 GO:0008545 JUN kinase kinase activity(GO:0008545)
0.0 0.3 GO:0030249 guanylate cyclase regulator activity(GO:0030249)
0.0 0.4 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.3 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.0 0.4 GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.0 0.2 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.0 0.1 GO:0071208 histone pre-mRNA DCP binding(GO:0071208) U7 snRNA binding(GO:0071209)
0.0 0.3 GO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
0.0 0.2 GO:0050265 RNA uridylyltransferase activity(GO:0050265)
0.0 0.3 GO:0051575 5'-deoxyribose-5-phosphate lyase activity(GO:0051575)
0.0 0.3 GO:0005004 GPI-linked ephrin receptor activity(GO:0005004)
0.0 0.1 GO:0035243 protein-arginine omega-N symmetric methyltransferase activity(GO:0035243)
0.0 0.1 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0 0.4 GO:0001054 RNA polymerase I activity(GO:0001054)
0.0 0.1 GO:0097677 STAT family protein binding(GO:0097677)
0.0 0.1 GO:1902379 chemoattractant activity involved in axon guidance(GO:1902379)
0.0 0.2 GO:0004738 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase [NAD(P)+] activity(GO:0034603) pyruvate dehydrogenase (NAD+) activity(GO:0034604)
0.0 1.0 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003)
0.0 0.2 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.3 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0015277 kainate selective glutamate receptor activity(GO:0015277)
0.0 0.1 GO:0005275 amine transmembrane transporter activity(GO:0005275)
0.0 0.1 GO:0004711 ribosomal protein S6 kinase activity(GO:0004711)
0.0 0.1 GO:0031694 alpha-2A adrenergic receptor binding(GO:0031694)
0.0 0.1 GO:0008859 exoribonuclease II activity(GO:0008859)
0.0 0.1 GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.3 GO:0038191 neuropilin binding(GO:0038191)
0.0 0.2 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.3 GO:1990226 histone methyltransferase binding(GO:1990226)
0.0 0.1 GO:0005146 leukemia inhibitory factor receptor binding(GO:0005146)
0.0 0.3 GO:0017151 DEAD/H-box RNA helicase binding(GO:0017151)
0.0 0.3 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.1 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177) 3 iron, 4 sulfur cluster binding(GO:0051538)
0.0 0.2 GO:0005127 ciliary neurotrophic factor receptor binding(GO:0005127)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.2 GO:0016500 protein-hormone receptor activity(GO:0016500)
0.0 0.4 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0031995 insulin-like growth factor II binding(GO:0031995)
0.0 0.6 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.1 GO:0070320 RNA polymerase I transcription factor binding(GO:0001179) inward rectifier potassium channel inhibitor activity(GO:0070320)
0.0 0.0 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0048406 nerve growth factor binding(GO:0048406)
0.0 0.1 GO:0001069 regulatory region RNA binding(GO:0001069)
0.0 0.2 GO:0005225 volume-sensitive anion channel activity(GO:0005225)
0.0 0.2 GO:0005522 profilin binding(GO:0005522)
0.0 0.1 GO:0016708 nitric oxide dioxygenase activity(GO:0008941) oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor(GO:0016708) iron-cytochrome-c reductase activity(GO:0047726)
0.0 0.1 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.3 GO:0016805 dipeptidase activity(GO:0016805)
0.0 0.1 GO:0070815 peptidyl-lysine 5-dioxygenase activity(GO:0070815)
0.0 0.1 GO:0031821 G-protein coupled serotonin receptor binding(GO:0031821)
0.0 0.1 GO:0043121 neurotrophin binding(GO:0043121)
0.0 0.2 GO:0005234 extracellular-glutamate-gated ion channel activity(GO:0005234)
0.0 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.0 GO:0030172 troponin C binding(GO:0030172)
0.0 0.5 GO:0005070 SH3/SH2 adaptor activity(GO:0005070)
0.0 0.1 GO:0048531 beta-1,3-galactosyltransferase activity(GO:0048531)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 PID ATR PATHWAY ATR signaling pathway
0.0 0.4 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.0 0.3 PID EPHA2 FWD PATHWAY EPHA2 forward signaling
0.0 0.6 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.0 0.5 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.0 0.1 PID S1P S1P4 PATHWAY S1P4 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.4 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol
0.0 0.8 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.0 0.2 REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0 0.3 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.4 REACTOME ELONGATION ARREST AND RECOVERY Genes involved in Elongation arrest and recovery
0.0 0.2 REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0 0.2 REACTOME TIE2 SIGNALING Genes involved in Tie2 Signaling
0.0 0.2 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.2 REACTOME ACTIVATION OF RAC Genes involved in Activation of Rac