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2D miR_HR1_12

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Results for Glis3

Z-value: 0.66

Motif logo

Transcription factors associated with Glis3

Gene Symbol Gene ID Gene Info
ENSMUSG00000052942.7 GLIS family zinc finger 3
ENSMUSG00000091294.1 GLIS family zinc finger 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Glis3mm10_v2_chr19_-_28680077_28680122-0.049.0e-01Click!

Activity profile of Glis3 motif

Sorted Z-values of Glis3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_-_152831112 1.75 ENSMUST00000128172.1
BCL2-like 1
chr14_-_55560340 1.16 ENSMUST00000066106.3
RIKEN cDNA A730061H03 gene
chr2_-_152830615 1.08 ENSMUST00000146380.1
ENSMUST00000134902.1
ENSMUST00000134357.1
ENSMUST00000109820.3
BCL2-like 1
chr2_-_144331695 0.82 ENSMUST00000103171.3
ovo-like 2 (Drosophila)
chr2_-_144332146 0.80 ENSMUST00000037423.3
ovo-like 2 (Drosophila)
chr14_+_55560480 0.72 ENSMUST00000121622.1
ENSMUST00000143431.1
ENSMUST00000150481.1
DDB1 and CUL4 associated factor 11
chr11_-_102296618 0.72 ENSMUST00000107132.2
ENSMUST00000073234.2
ataxin 7-like 3
chr7_+_25268387 0.71 ENSMUST00000169392.1
capicua homolog (Drosophila)
chr2_-_152831665 0.70 ENSMUST00000156688.1
ENSMUST00000007803.5
BCL2-like 1
chrX_-_7574120 0.67 ENSMUST00000045924.7
ENSMUST00000115742.2
ENSMUST00000150787.1
protein phosphatase 1, regulatory (inhibitor) subunit 3F
chr1_-_168431502 0.66 ENSMUST00000064438.4
pre B cell leukemia homeobox 1
chr16_+_20733104 0.65 ENSMUST00000115423.1
ENSMUST00000007171.6
chordin
chr14_+_55560904 0.60 ENSMUST00000072530.4
ENSMUST00000128490.1
DDB1 and CUL4 associated factor 11
chr14_+_55561060 0.59 ENSMUST00000117701.1
DDB1 and CUL4 associated factor 11
chr1_+_167001457 0.57 ENSMUST00000126198.1
family with sequence similarity 78, member B
chr1_-_168431896 0.57 ENSMUST00000176540.1
pre B cell leukemia homeobox 1
chr9_-_108305941 0.52 ENSMUST00000044725.7
T cell leukemia translocation altered gene
chr7_+_126781483 0.50 ENSMUST00000172352.1
ENSMUST00000094037.4
T-box 6
chr12_+_109743787 0.47 ENSMUST00000183068.1
miRNA containing gene
chr1_+_167001417 0.39 ENSMUST00000165874.1
family with sequence similarity 78, member B
chr17_+_37045963 0.38 ENSMUST00000025338.9
gamma-aminobutyric acid (GABA) B receptor, 1
chr1_-_168432270 0.38 ENSMUST00000072863.4
pre B cell leukemia homeobox 1
chr1_-_168431695 0.37 ENSMUST00000176790.1
pre B cell leukemia homeobox 1
chr4_+_63215402 0.35 ENSMUST00000036300.6
collagen, type XXVII, alpha 1
chrX_-_94542037 0.34 ENSMUST00000026142.7
melanoma antigen, family D, 1
chrX_-_135009185 0.31 ENSMUST00000113185.2
ENSMUST00000064659.5
zinc finger, matrin type 1
chr7_+_5020376 0.31 ENSMUST00000076251.4
zinc finger protein 865
chr5_+_104459450 0.31 ENSMUST00000086831.3
polycystic kidney disease 2
chr10_+_93641041 0.29 ENSMUST00000020204.4
netrin 4
chr2_-_54085542 0.29 ENSMUST00000100089.2
reprimo, TP53 dependent G2 arrest mediator candidate
chr3_+_103914560 0.29 ENSMUST00000106806.1
rosbin, round spermatid basic protein 1
chr7_+_5020561 0.29 ENSMUST00000085427.3
zinc finger protein 865
chr4_-_115133977 0.27 ENSMUST00000051400.7
cytochrome P450, family 4, subfamily x, polypeptide 1
chr12_+_69241832 0.25 ENSMUST00000063445.6
kelch domain containing 1
chr11_+_116030304 0.25 ENSMUST00000021116.5
ENSMUST00000106452.1
unkempt homolog (Drosophila)
chr14_+_45219993 0.24 ENSMUST00000146150.1
G protein-coupled receptor 137C
chr10_-_105574435 0.23 ENSMUST00000061506.8
transmembrane and tetratricopeptide repeat containing 2
chr11_-_72489904 0.23 ENSMUST00000045303.3
spinster homolog 2
chr6_+_17463927 0.22 ENSMUST00000115442.1
met proto-oncogene
chr9_+_108306205 0.22 ENSMUST00000007959.8
ras homolog gene family, member A
chr10_-_127211528 0.22 ENSMUST00000013970.7
phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
chr6_+_17463749 0.22 ENSMUST00000115443.1
met proto-oncogene
chrX_+_101254528 0.22 ENSMUST00000062000.4
forkhead box O4
chr6_+_17463826 0.22 ENSMUST00000140070.1
met proto-oncogene
chr6_-_122820606 0.22 ENSMUST00000181317.1
predicted gene, 26826
chr5_-_122989086 0.20 ENSMUST00000046073.9
lysine (K)-specific demethylase 2B
chr17_+_86963279 0.19 ENSMUST00000139344.1
ras homolog gene family, member Q
chr17_-_34031644 0.19 ENSMUST00000171872.1
solute carrier family 39 (zinc transporter), member 7
chr3_-_89245829 0.19 ENSMUST00000041022.8
tripartite motif-containing 46
chr5_-_122989260 0.19 ENSMUST00000118027.1
lysine (K)-specific demethylase 2B
chr17_-_34031544 0.18 ENSMUST00000025186.8
solute carrier family 39 (zinc transporter), member 7
chr17_-_34031684 0.17 ENSMUST00000169397.1
solute carrier family 39 (zinc transporter), member 7
chr17_+_56326045 0.17 ENSMUST00000139679.1
ENSMUST00000025036.4
ENSMUST00000086835.5
lysine (K)-specific demethylase 4B
chr13_+_38345716 0.17 ENSMUST00000171970.1
bone morphogenetic protein 6
chr16_+_44173271 0.16 ENSMUST00000088356.4
ENSMUST00000169582.1
predicted gene 608
chrX_-_101419788 0.15 ENSMUST00000117901.1
ENSMUST00000120201.1
ENSMUST00000117637.1
ENSMUST00000134005.1
ENSMUST00000121520.1
zinc finger, MYM-type 3
chr10_-_13474361 0.14 ENSMUST00000105547.1
phosphatase and actin regulator 2
chr2_-_73892588 0.13 ENSMUST00000154456.1
ENSMUST00000090802.4
ENSMUST00000055833.5
activating transcription factor 2
chr3_+_52268337 0.13 ENSMUST00000053764.5
forkhead box O1
chr4_-_120747248 0.13 ENSMUST00000030376.7
potassium voltage-gated channel, subfamily Q, member 4
chr2_-_73892619 0.13 ENSMUST00000112007.1
ENSMUST00000112016.2
activating transcription factor 2
chr9_+_56418624 0.12 ENSMUST00000034879.3
high mobility group 20A
chr2_-_73892530 0.12 ENSMUST00000136958.1
ENSMUST00000112010.2
ENSMUST00000128531.1
ENSMUST00000112017.1
activating transcription factor 2
chr11_-_85139939 0.11 ENSMUST00000108075.2
ubiquitin specific peptidase 32
chr2_-_114052804 0.11 ENSMUST00000090269.6
actin, alpha, cardiac muscle 1
chr7_-_16286744 0.11 ENSMUST00000150528.2
ENSMUST00000118976.2
ENSMUST00000146609.2
coiled-coil domain containing 9
chr4_+_118428078 0.10 ENSMUST00000006557.6
ENSMUST00000167636.1
ENSMUST00000102673.4
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
chr5_+_110135823 0.10 ENSMUST00000112519.2
ENSMUST00000014812.8
checkpoint with forkhead and ring finger domains
chr6_+_88198656 0.10 ENSMUST00000015197.7
GATA binding protein 2
chr11_+_3289880 0.10 ENSMUST00000110043.1
ENSMUST00000094471.3
POZ (BTB) and AT hook containing zinc finger 1
chrX_-_94123087 0.10 ENSMUST00000113925.1
zinc finger protein X-linked
chr13_+_37826225 0.10 ENSMUST00000128570.1
ras responsive element binding protein 1
chr4_+_129058133 0.09 ENSMUST00000030584.4
ENSMUST00000168461.1
ENSMUST00000152565.1
ring finger protein 19B
chr15_-_102366314 0.09 ENSMUST00000078508.5
Sp7 transcription factor 7
chr11_+_98795495 0.08 ENSMUST00000037915.2
male-specific lethal 1 homolog (Drosophila)
chr5_-_24527276 0.07 ENSMUST00000088311.4
gastrulation brain homeobox 1
chr7_+_127485221 0.07 ENSMUST00000048896.6
fibrosin
chr4_+_144893127 0.07 ENSMUST00000142808.1
dehydrogenase/reductase (SDR family) member 3
chr4_+_144892813 0.07 ENSMUST00000105744.1
ENSMUST00000171001.1
dehydrogenase/reductase (SDR family) member 3
chr10_+_127739516 0.07 ENSMUST00000054287.7
zinc finger and BTB domain containing 39
chr7_+_45017953 0.07 ENSMUST00000044111.7
Harvey rat sarcoma oncogene, subgroup R
chr6_-_83572429 0.07 ENSMUST00000068054.7
STAM binding protein
chr1_-_64121456 0.07 ENSMUST00000142009.1
ENSMUST00000114086.1
Kruppel-like factor 7 (ubiquitous)
chr5_-_91402905 0.06 ENSMUST00000121044.2
betacellulin, epidermal growth factor family member
chr15_-_39857459 0.06 ENSMUST00000022915.3
ENSMUST00000110306.1
dihydropyrimidinase
chr7_+_90442729 0.06 ENSMUST00000061767.4
ENSMUST00000107206.1
CREB/ATF bZIP transcription factor
chr4_+_86053887 0.06 ENSMUST00000107178.2
ENSMUST00000048885.5
ENSMUST00000141889.1
ENSMUST00000120678.1
ADAMTS-like 1
chr11_+_97663366 0.06 ENSMUST00000044730.5
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
chr11_-_52000432 0.05 ENSMUST00000020657.6
ubiquitin-conjugating enzyme E2B
chrX_-_38564519 0.05 ENSMUST00000016681.8
cullin 4B
chr18_-_78206408 0.05 ENSMUST00000163367.1
solute carrier family 14 (urea transporter), member 2
chr5_-_121502980 0.05 ENSMUST00000079368.3
a disintegrin and metallopeptidase domain 1b
chr3_-_94582548 0.05 ENSMUST00000107283.1
sorting nexin family member 27
chr3_+_121426495 0.04 ENSMUST00000029773.8
calponin 3, acidic
chr19_+_46305682 0.04 ENSMUST00000111881.2
nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
chrX_-_111697069 0.04 ENSMUST00000113422.2
ENSMUST00000038472.5
highly divergent homeobox
chrX_-_136868537 0.04 ENSMUST00000058814.6
RAB9B, member RAS oncogene family
chr11_+_96271453 0.04 ENSMUST00000000010.8
ENSMUST00000174042.1
homeobox B9
chr2_-_29253001 0.04 ENSMUST00000071201.4
netrin G2
chr3_-_94582716 0.04 ENSMUST00000029783.9
sorting nexin family member 27
chr11_-_115536181 0.04 ENSMUST00000118155.1
ENSMUST00000153892.1
SMT3 suppressor of mif two 3 homolog 2 (yeast)
chr13_+_37826018 0.03 ENSMUST00000110238.2
ras responsive element binding protein 1
chr11_+_100619217 0.03 ENSMUST00000107376.1
NFKB inhibitor interacting Ras-like protein 2
chr13_-_40730416 0.03 ENSMUST00000021787.5
transcription factor AP-2, alpha
chr2_-_18998126 0.03 ENSMUST00000006912.5
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr6_+_95117740 0.02 ENSMUST00000032107.7
ENSMUST00000119582.1
kelch repeat and BTB (POZ) domain containing 8
chr8_-_87959560 0.02 ENSMUST00000109655.2
zinc finger protein 423
chr11_+_101468164 0.02 ENSMUST00000001347.6
Rho family GTPase 2
chr7_-_46795881 0.01 ENSMUST00000107653.1
ENSMUST00000107654.1
ENSMUST00000014562.7
ENSMUST00000152759.1
Hermansky-Pudlak syndrome 5 homolog (human)
chr19_+_8941865 0.01 ENSMUST00000096240.2
metastasis-associated gene family, member 2
chr3_+_89246397 0.01 ENSMUST00000168900.1
keratinocyte associated protein 2
chr11_+_69632927 0.01 ENSMUST00000018909.3
fragile X mental retardation, autosomal homolog 2
chr3_+_89245952 0.01 ENSMUST00000040888.5
keratinocyte associated protein 2
chr7_-_142899985 0.01 ENSMUST00000000219.3
tyrosine hydroxylase
chr19_+_4711153 0.01 ENSMUST00000008991.6
spectrin beta, non-erythrocytic 2
chr11_+_77982710 0.01 ENSMUST00000108360.1
ENSMUST00000049167.7
PHD finger protein 12
chr7_+_25282784 0.00 ENSMUST00000165239.1
capicua homolog (Drosophila)
chr10_+_63457505 0.00 ENSMUST00000105440.1
catenin (cadherin associated protein), alpha 3
chr17_-_65613521 0.00 ENSMUST00000024897.8
vesicle-associated membrane protein, associated protein A

Network of associatons between targets according to the STRING database.

First level regulatory network of Glis3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 3.5 GO:0046898 response to cycloheximide(GO:0046898)
0.2 1.6 GO:0060214 endocardium formation(GO:0060214)
0.1 0.6 GO:0021914 negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914)
0.1 0.3 GO:0003127 detection of nodal flow(GO:0003127) detection of endogenous stimulus(GO:0009726)
0.1 0.4 GO:0021993 initiation of neural tube closure(GO:0021993)
0.1 0.7 GO:0070494 regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495)
0.1 0.5 GO:0072675 osteoclast fusion(GO:0072675)
0.1 0.4 GO:0032915 positive regulation of transforming growth factor beta2 production(GO:0032915)
0.1 0.2 GO:1990869 response to chemokine(GO:1990868) cellular response to chemokine(GO:1990869)
0.1 0.5 GO:0014043 negative regulation of neuron maturation(GO:0014043)
0.1 2.0 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971)
0.1 0.3 GO:0035426 extracellular matrix-cell signaling(GO:0035426)
0.1 0.3 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.1 0.4 GO:0014053 negative regulation of gamma-aminobutyric acid secretion(GO:0014053)
0.1 0.6 GO:2000465 regulation of glycogen (starch) synthase activity(GO:2000465)
0.0 0.2 GO:0003376 sphingosine-1-phosphate signaling pathway(GO:0003376) eye pigmentation(GO:0048069)
0.0 0.1 GO:0032227 negative regulation of synaptic transmission, dopaminergic(GO:0032227)
0.0 0.2 GO:0032349 positive regulation of aldosterone metabolic process(GO:0032346) positive regulation of aldosterone biosynthetic process(GO:0032349)
0.0 0.1 GO:0030240 skeletal muscle thin filament assembly(GO:0030240)
0.0 0.2 GO:0070317 negative regulation of G0 to G1 transition(GO:0070317)
0.0 0.7 GO:0016578 histone deubiquitination(GO:0016578)
0.0 0.1 GO:2000977 eosinophil differentiation(GO:0030222) regulation of forebrain neuron differentiation(GO:2000977)
0.0 0.1 GO:0019230 proprioception(GO:0019230)
0.0 0.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.3 GO:2000766 negative regulation of cytoplasmic translation(GO:2000766)
0.0 0.1 GO:0006210 pyrimidine nucleobase catabolic process(GO:0006208) thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
0.0 0.1 GO:2001160 regulation of histone H3-K79 methylation(GO:2001160)
0.0 0.0 GO:0071918 urea transmembrane transport(GO:0071918)
0.0 0.3 GO:0090190 positive regulation of branching involved in ureteric bud morphogenesis(GO:0090190)
0.0 0.0 GO:0002266 follicular dendritic cell activation(GO:0002266) follicular dendritic cell differentiation(GO:0002268)
0.0 0.2 GO:0070544 histone H3-K36 demethylation(GO:0070544)
0.0 0.1 GO:0071455 cellular response to hyperoxia(GO:0071455)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.5 GO:0097136 Bcl-2 family protein complex(GO:0097136)
0.1 0.4 GO:0038039 G-protein coupled receptor heterodimeric complex(GO:0038039)
0.1 0.3 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
0.1 2.0 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.7 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:1990769 proximal neuron projection(GO:1990769)
0.0 0.3 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.1 GO:0044194 cytolytic granule(GO:0044194)
0.0 0.1 GO:0072487 MSL complex(GO:0072487)
0.0 0.0 GO:0033257 Bcl3/NF-kappaB2 complex(GO:0033257)
0.0 0.1 GO:0071203 WASH complex(GO:0071203)
0.0 0.2 GO:0031618 nuclear pericentric heterochromatin(GO:0031618)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 3.5 GO:0051434 BH3 domain binding(GO:0051434)
0.2 0.7 GO:2001069 glycogen binding(GO:2001069)
0.2 0.7 GO:0005008 hepatocyte growth factor-activated receptor activity(GO:0005008)
0.1 0.6 GO:0045545 syndecan binding(GO:0045545)
0.1 0.3 GO:0048763 calcium-induced calcium release activity(GO:0048763)
0.1 0.4 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.1 0.2 GO:0046624 sphingolipid transporter activity(GO:0046624)
0.0 0.3 GO:0043237 laminin-1 binding(GO:0043237)
0.0 0.4 GO:0008140 cAMP response element binding protein binding(GO:0008140)
0.0 0.5 GO:0051864 histone demethylase activity (H3-K36 specific)(GO:0051864)
0.0 0.3 GO:1990715 mRNA CDS binding(GO:1990715)
0.0 0.2 GO:0051022 Rho GDP-dissociation inhibitor binding(GO:0051022)
0.0 0.1 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.3 GO:0070330 aromatase activity(GO:0070330)
0.0 0.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.2 GO:0005522 profilin binding(GO:0005522)
0.0 0.2 GO:0070700 BMP receptor binding(GO:0070700)
0.0 0.7 GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.5 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.0 0.3 NABA COLLAGENS Genes encoding collagen proteins
0.0 2.0 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.8 PID BMP PATHWAY BMP receptor signaling
0.0 0.2 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 0.3 PID HDAC CLASSIII PATHWAY Signaling events mediated by HDAC Class III
0.0 0.7 PID SYNDECAN 1 PATHWAY Syndecan-1-mediated signaling events
0.0 0.3 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.0 0.4 SA B CELL RECEPTOR COMPLEXES Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.5 REACTOME INFLAMMASOMES Genes involved in Inflammasomes
0.0 0.3 REACTOME ROLE OF DCC IN REGULATING APOPTOSIS Genes involved in Role of DCC in regulating apoptosis
0.0 0.5 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.0 0.9 REACTOME SEMA4D IN SEMAPHORIN SIGNALING Genes involved in Sema4D in semaphorin signaling
0.0 0.4 REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS Genes involved in Activation of the AP-1 family of transcription factors
0.0 0.3 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)