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2D miR_HR1_12

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Results for Gsc2_Dmbx1

Z-value: 0.65

Motif logo

Transcription factors associated with Gsc2_Dmbx1

Gene Symbol Gene ID Gene Info
ENSMUSG00000022738.6 goosecoid homebox 2
ENSMUSG00000028707.9 diencephalon/mesencephalon homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Dmbx1mm10_v2_chr4_-_115939923_1159399280.642.5e-02Click!

Activity profile of Gsc2_Dmbx1 motif

Sorted Z-values of Gsc2_Dmbx1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_-_19280032 1.60 ENSMUST00000032560.4
protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
chr17_+_35861343 1.35 ENSMUST00000172931.1
nurim (nuclear envelope membrane protein)
chr17_+_35861318 1.34 ENSMUST00000074259.8
ENSMUST00000174873.1
nurim (nuclear envelope membrane protein)
chr4_-_137766474 1.26 ENSMUST00000139951.1
alkaline phosphatase, liver/bone/kidney
chr7_-_133015248 1.01 ENSMUST00000169570.1
C-terminal binding protein 2
chr11_-_68973840 0.80 ENSMUST00000038644.4
RAN guanine nucleotide release factor
chrX_+_134585644 0.76 ENSMUST00000113211.1
ribosomal protein L36A
chr14_+_37068042 0.69 ENSMUST00000057176.3
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
chr3_-_32985076 0.68 ENSMUST00000108221.1
peroxisomal biogenesis factor 5-like
chr1_+_178187721 0.62 ENSMUST00000159284.1
desumoylating isopeptidase 2
chr11_-_52282564 0.62 ENSMUST00000086844.3
transcription factor 7, T cell specific
chr4_-_141053660 0.60 ENSMUST00000040222.7
ciliary rootlet coiled-coil, rootletin
chr14_-_19977151 0.59 ENSMUST00000055100.7
ENSMUST00000162425.1
guanine nucleotide binding protein (G protein), gamma 2
chr18_+_46597698 0.55 ENSMUST00000078079.3
ENSMUST00000168382.1
eukaryotic translation initiation factor 1A
chr5_+_3343893 0.54 ENSMUST00000165117.1
cyclin-dependent kinase 6
chr14_-_19977040 0.48 ENSMUST00000159028.1
guanine nucleotide binding protein (G protein), gamma 2
chr11_+_98026695 0.48 ENSMUST00000092425.4
ribosomal protein L19
chr9_-_50617228 0.46 ENSMUST00000147671.1
ENSMUST00000145139.1
ENSMUST00000155435.1
expressed sequence AU019823
chr9_+_50617516 0.44 ENSMUST00000141366.1
PIH1 domain containing 2
chr15_+_4375462 0.43 ENSMUST00000061925.4
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr19_-_53371766 0.43 ENSMUST00000086887.1
predicted gene 10197
chr2_-_121085835 0.42 ENSMUST00000028721.7
transglutaminase 5
chr14_-_118052235 0.42 ENSMUST00000022725.2
dopachrome tautomerase
chr11_-_90687572 0.40 ENSMUST00000107869.2
ENSMUST00000154599.1
ENSMUST00000107868.1
ENSMUST00000020849.2
target of myb1-like 1 (chicken)
chr5_-_96161990 0.40 ENSMUST00000155901.1
CCR4-NOT transcription complex, subunit 6-like
chr11_+_23256566 0.39 ENSMUST00000136235.1
exportin 1, CRM1 homolog (yeast)
chr10_+_80292453 0.39 ENSMUST00000068408.7
ENSMUST00000062674.6
ribosomal protein S15
chrX_+_74424632 0.39 ENSMUST00000114129.2
ENSMUST00000132749.1
inhibitor of kappaB kinase gamma
chr17_+_27655643 0.39 ENSMUST00000114872.1
protein kinase C and casein kinase substrate in neurons 1
chr8_-_106136792 0.36 ENSMUST00000146940.1
epithelial splicing regulatory protein 2
chr19_-_12765447 0.35 ENSMUST00000112933.1
ciliary neurotrophic factor
chr14_-_19977249 0.35 ENSMUST00000160013.1
guanine nucleotide binding protein (G protein), gamma 2
chr17_+_27655509 0.35 ENSMUST00000114873.1
protein kinase C and casein kinase substrate in neurons 1
chr5_-_150518164 0.34 ENSMUST00000118769.1
zygote arrest 1-like
chr7_-_15879844 0.32 ENSMUST00000172758.1
ENSMUST00000044434.6
cone-rod homeobox containing gene
chr2_-_73486456 0.32 ENSMUST00000141264.1
WAS/WASL interacting protein family, member 1
chr8_-_106136890 0.31 ENSMUST00000115979.2
epithelial splicing regulatory protein 2
chr7_-_80403315 0.30 ENSMUST00000147150.1
furin (paired basic amino acid cleaving enzyme)
chr4_-_133968611 0.30 ENSMUST00000102552.1
high mobility group nucleosomal binding domain 2
chr5_+_3344194 0.30 ENSMUST00000042410.4
cyclin-dependent kinase 6
chr18_-_12305638 0.28 ENSMUST00000122408.1
ENSMUST00000118525.1
ENSMUST00000142066.1
ankyrin repeat domain 29
chr11_+_70459940 0.28 ENSMUST00000147289.1
ENSMUST00000126105.1
zinc finger, MYND-type containing 15
chr19_+_36083696 0.28 ENSMUST00000025714.7
ribonuclease P/MRP 30 subunit
chrM_+_8600 0.28 ENSMUST00000082409.1
mitochondrially encoded cytochrome c oxidase III
chr10_-_19014549 0.28 ENSMUST00000146388.1
tumor necrosis factor, alpha-induced protein 3
chr14_+_64588112 0.27 ENSMUST00000181808.1
RIKEN cDNA A930011O12 gene
chrM_+_7759 0.26 ENSMUST00000082407.1
ENSMUST00000082408.1
mitochondrially encoded ATP synthase 8
mitochondrially encoded ATP synthase 6
chr16_-_46010212 0.24 ENSMUST00000130481.1
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr16_-_76022266 0.23 ENSMUST00000114240.1
SAM domain, SH3 domain and nuclear localization signals, 1
chr17_+_27655572 0.20 ENSMUST00000045896.3
protein kinase C and casein kinase substrate in neurons 1
chr8_+_19682268 0.20 ENSMUST00000153710.1
ENSMUST00000127799.1
predicted gene 6483
chr4_-_141053704 0.19 ENSMUST00000102491.3
ciliary rootlet coiled-coil, rootletin
chr11_+_23256001 0.19 ENSMUST00000020538.6
ENSMUST00000109551.1
ENSMUST00000102870.1
ENSMUST00000102869.1
exportin 1, CRM1 homolog (yeast)
chr19_+_4139799 0.18 ENSMUST00000096338.3
G protein-coupled receptor 152
chr11_+_70017199 0.17 ENSMUST00000133140.1
discs, large homolog 4 (Drosophila)
chr5_+_149184678 0.14 ENSMUST00000139474.1
ENSMUST00000117878.1
ubiquitin specific peptidase like 1
chr2_+_102658640 0.14 ENSMUST00000080210.3
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr6_-_59426279 0.14 ENSMUST00000051065.4
GPRIN family member 3
chr11_+_87755567 0.14 ENSMUST00000123700.1
RIKEN cDNA A430104N18 gene
chrX_+_38600626 0.14 ENSMUST00000000365.2
malignant T cell amplified sequence 1
chr10_-_6980376 0.13 ENSMUST00000105617.1
interaction protein for cytohesin exchange factors 1
chr11_+_61208621 0.13 ENSMUST00000108716.1
ENSMUST00000019246.3
aldehyde dehydrogenase family 3, subfamily A1
chr13_-_97747399 0.13 ENSMUST00000144993.1
RIKEN cDNA 5330416C01 gene
chrX_+_74424534 0.13 ENSMUST00000135165.1
ENSMUST00000114128.1
ENSMUST00000114133.2
ENSMUST00000004330.3
inhibitor of kappaB kinase gamma
chr13_+_23752267 0.13 ENSMUST00000091703.2
histone cluster 1, H3b
chrX_+_169879596 0.12 ENSMUST00000112105.1
ENSMUST00000078947.5
midline 1
chr6_+_4902913 0.12 ENSMUST00000175889.1
ENSMUST00000168998.2
protein phosphatase 1, regulatory (inhibitor) subunit 9A
chr19_+_46056539 0.12 ENSMUST00000111899.1
ENSMUST00000099392.3
ENSMUST00000062322.4
peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19_-_43752924 0.12 ENSMUST00000045562.5
cytochrome c oxidase assembly protein 15
chr7_-_28547109 0.12 ENSMUST00000057974.3
non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr2_-_104257400 0.11 ENSMUST00000141159.1
RIKEN cDNA D430041D05 gene
chr1_-_155232710 0.11 ENSMUST00000035914.3
cDNA sequence BC034090
chr8_-_62123106 0.11 ENSMUST00000034052.6
ENSMUST00000034054.7
annexin A10
chr3_+_103809520 0.10 ENSMUST00000076599.1
ENSMUST00000106824.1
ENSMUST00000106823.1
ENSMUST00000047285.2
adaptor-related protein complex AP-4, beta 1
chr11_-_5099084 0.10 ENSMUST00000063232.6
Ewing sarcoma breakpoint region 1
chr4_+_154960915 0.09 ENSMUST00000049621.6
hairy and enhancer of split 5 (Drosophila)
chr1_-_92473801 0.09 ENSMUST00000027478.6
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
chr10_+_18407658 0.09 ENSMUST00000037341.7
NHS-like 1
chr14_-_54617993 0.08 ENSMUST00000022803.4
proteasome (prosome, macropain) subunit, beta type 5
chr3_-_88461182 0.08 ENSMUST00000166237.1
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr13_-_21783391 0.08 ENSMUST00000099704.3
histone cluster 1, H3i
chr17_-_35164891 0.07 ENSMUST00000025253.5
proline-rich coiled-coil 2A
chr11_-_70459957 0.07 ENSMUST00000019064.2
chemokine (C-X-C motif) ligand 16
chr7_-_133123770 0.06 ENSMUST00000164896.1
ENSMUST00000171968.1
C-terminal binding protein 2
chr11_+_70017085 0.06 ENSMUST00000108589.2
discs, large homolog 4 (Drosophila)
chr11_-_70619194 0.06 ENSMUST00000102556.3
ENSMUST00000014753.8
cholinergic receptor, nicotinic, epsilon polypeptide
chr8_-_60954726 0.06 ENSMUST00000110302.1
chloride channel 3
chr6_-_29380513 0.05 ENSMUST00000080428.6
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr2_+_91259822 0.05 ENSMUST00000138470.1
protein kinase C and casein kinase substrate in neurons 3
chr6_-_38109548 0.05 ENSMUST00000114908.1
ATPase, H+ transporting, lysosomal V0 subunit A4
chr7_-_126975400 0.05 ENSMUST00000180704.1
RIKEN cDNA D830044I16 gene
chr19_+_43752996 0.04 ENSMUST00000026199.7
ENSMUST00000112047.3
ENSMUST00000153295.1
cutC copper transporter homolog (E.coli)
chr9_-_60838200 0.04 ENSMUST00000063858.7
predicted gene 9869
chr19_-_47692042 0.03 ENSMUST00000026045.7
ENSMUST00000086923.5
collagen, type XVII, alpha 1
chr18_-_75697639 0.03 ENSMUST00000165559.1
CBP80/20-dependent translation initiation factor
chr7_+_126976338 0.03 ENSMUST00000032920.3
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr3_-_144849301 0.03 ENSMUST00000159989.1
chloride channel calcium activated 4
chr6_-_142322941 0.02 ENSMUST00000128446.1
solute carrier organic anion transporter family, member 1a5
chr3_-_145099024 0.02 ENSMUST00000040465.6
chloride channel calcium activated 5
chr10_+_128225830 0.02 ENSMUST00000026455.7
major intrinsic protein of eye lens fiber
chrX_-_43167817 0.02 ENSMUST00000115058.1
ENSMUST00000115059.1
teneurin transmembrane protein 1
chr1_+_12692430 0.02 ENSMUST00000180062.1
ENSMUST00000177608.1
sulfatase 1
chr11_+_5099608 0.02 ENSMUST00000139742.1
rhomboid domain containing 3
chr11_-_5099036 0.02 ENSMUST00000102930.3
Ewing sarcoma breakpoint region 1
chr7_-_105752193 0.02 ENSMUST00000033184.4
tripeptidyl peptidase I
chr7_+_64153916 0.01 ENSMUST00000107527.2
transient receptor potential cation channel, subfamily M, member 1
chr8_-_95306585 0.01 ENSMUST00000119870.2
ENSMUST00000093268.4
cyclic nucleotide gated channel beta 1
chr7_+_64153835 0.01 ENSMUST00000085222.5
ENSMUST00000107525.1
transient receptor potential cation channel, subfamily M, member 1
chr13_-_113618549 0.01 ENSMUST00000109241.3
sorting nexin 18
chr11_-_5099053 0.01 ENSMUST00000093365.5
ENSMUST00000073308.4
Ewing sarcoma breakpoint region 1
chr2_+_102659213 0.01 ENSMUST00000111213.1
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr7_-_98656530 0.01 ENSMUST00000038359.4
RIKEN cDNA 2210018M11 gene
chr14_-_105177280 0.00 ENSMUST00000100327.3
ENSMUST00000022715.7
RNA binding motif protein 26
chr19_-_38043559 0.00 ENSMUST00000041475.8
ENSMUST00000172095.2
myoferlin

Network of associatons between targets according to the STRING database.

First level regulatory network of Gsc2_Dmbx1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0032053 ciliary basal body organization(GO:0032053)
0.1 1.0 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 0.8 GO:0044838 cell quiescence(GO:0044838)
0.1 0.4 GO:0048691 positive regulation of sprouting of injured axon(GO:0048687) positive regulation of axon extension involved in regeneration(GO:0048691)
0.1 0.8 GO:0086043 bundle of His cell to Purkinje myocyte signaling(GO:0086028) bundle of His cell action potential(GO:0086043)
0.1 1.1 GO:0048386 positive regulation of retinoic acid receptor signaling pathway(GO:0048386)
0.1 0.3 GO:0002631 regulation of granuloma formation(GO:0002631) negative regulation of granuloma formation(GO:0002632) regulation of toll-like receptor 5 signaling pathway(GO:0034147) negative regulation of toll-like receptor 5 signaling pathway(GO:0034148) negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway(GO:0070429) tolerance induction to lipopolysaccharide(GO:0072573)
0.1 0.7 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560)
0.1 0.6 GO:0002681 somatic diversification of T cell receptor genes(GO:0002568) somatic recombination of T cell receptor gene segments(GO:0002681) T cell receptor V(D)J recombination(GO:0033153)
0.1 0.3 GO:0090472 dibasic protein processing(GO:0090472)
0.1 0.4 GO:0021847 ventricular zone neuroblast division(GO:0021847)
0.0 0.4 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.1 GO:1904049 negative regulation of spontaneous neurotransmitter secretion(GO:1904049)
0.0 0.2 GO:0070779 D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779)
0.0 0.1 GO:0030576 Cajal body organization(GO:0030576)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 1.0 GO:0097320 membrane tubulation(GO:0097320)
0.0 0.1 GO:2000978 negative regulation of forebrain neuron differentiation(GO:2000978)
0.0 0.5 GO:0007250 activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.0 1.3 GO:0036075 endochondral ossification(GO:0001958) replacement ossification(GO:0036075) response to antibiotic(GO:0046677)
0.0 0.3 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0097401 synaptic vesicle lumen acidification(GO:0097401)
0.0 0.2 GO:0098953 receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628)
0.0 0.7 GO:0060445 branching involved in salivary gland morphogenesis(GO:0060445)
0.0 0.4 GO:0018149 peptide cross-linking(GO:0018149)
0.0 0.1 GO:0097475 motor neuron migration(GO:0097475)
0.0 0.4 GO:0031954 positive regulation of protein autophosphorylation(GO:0031954)
0.0 0.1 GO:0035372 protein localization to microtubule(GO:0035372)
0.0 0.3 GO:0015986 energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.7 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.7 GO:0017071 intracellular cyclic nucleotide activated cation channel complex(GO:0017071)
0.1 0.4 GO:0097058 CRLF-CLCF1 complex(GO:0097058)
0.1 1.3 GO:0065010 extracellular membrane-bounded organelle(GO:0065010)
0.1 1.1 GO:0097470 ribbon synapse(GO:0097470)
0.1 0.6 GO:0005642 annulate lamellae(GO:0005642)
0.0 0.3 GO:0000172 ribonuclease MRP complex(GO:0000172)
0.0 0.8 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.9 GO:0030137 COPI-coated vesicle(GO:0030137)
0.0 0.5 GO:0008385 IkappaB kinase complex(GO:0008385)
0.0 0.1 GO:1990761 growth cone lamellipodium(GO:1990761)
0.0 1.4 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.3 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.4 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.3 GO:0012510 trans-Golgi network transport vesicle membrane(GO:0012510)
0.0 1.2 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.8 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.6 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.4 GO:0042470 melanosome(GO:0042470) pigment granule(GO:0048770)
0.0 0.2 GO:0044224 juxtaparanode region of axon(GO:0044224)
0.0 0.5 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0098770 FBXO family protein binding(GO:0098770)
0.2 1.3 GO:0004035 alkaline phosphatase activity(GO:0004035)
0.2 0.5 GO:1990450 linear polyubiquitin binding(GO:1990450)
0.1 1.1 GO:0016618 hydroxypyruvate reductase activity(GO:0016618) glyoxylate reductase (NADP) activity(GO:0030267)
0.1 0.7 GO:0005052 peroxisome matrix targeting signal-1 binding(GO:0005052)
0.1 0.5 GO:1990932 5.8S rRNA binding(GO:1990932)
0.1 1.4 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.1 0.5 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.6 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.1 GO:0070138 isopeptidase activity(GO:0070122) ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.0 0.4 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0 0.1 GO:0018479 benzaldehyde dehydrogenase (NAD+) activity(GO:0018479)
0.0 0.4 GO:0005138 interleukin-6 receptor binding(GO:0005138)
0.0 0.3 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.0 0.2 GO:0031811 G-protein coupled nucleotide receptor binding(GO:0031811) P2Y1 nucleotide receptor binding(GO:0031812)
0.0 0.4 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.0 0.3 GO:0043522 leucine zipper domain binding(GO:0043522)
0.0 0.3 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.2 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.0 1.6 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.8 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.4 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.3 GO:0048406 nerve growth factor binding(GO:0048406)
0.0 0.4 GO:0017160 Ral GTPase binding(GO:0017160)
0.0 0.1 GO:0072320 volume-sensitive chloride channel activity(GO:0072320)
0.0 0.4 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.0 1.4 PID NFKAPPAB CANONICAL PATHWAY Canonical NF-kappaB pathway
0.0 1.7 WNT SIGNALING Genes related to Wnt-mediated signal transduction
0.0 0.8 PID IL2 STAT5 PATHWAY IL2 signaling events mediated by STAT5

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 Genes involved in IKK complex recruitment mediated by RIP1
0.0 1.4 REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA Genes involved in G beta:gamma signalling through PLC beta
0.0 0.6 REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION Genes involved in Cyclin A/B1 associated events during G2/M transition
0.0 0.3 REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0 0.8 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 1.6 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation