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2D miR_HR1_12

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Results for Prdm4

Z-value: 0.24

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Transcription factors associated with Prdm4

Gene Symbol Gene ID Gene Info
ENSMUSG00000035529.9 PR domain containing 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Prdm4mm10_v2_chr10_-_85916902_85917006-0.947.7e-06Click!

Activity profile of Prdm4 motif

Sorted Z-values of Prdm4 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_44198191 0.33 ENSMUST00000085450.2
kallikrein 1-related peptidase b3
chr12_+_113152012 0.24 ENSMUST00000006523.7
cysteine-rich protein 1 (intestinal)
chr5_-_4758216 0.23 ENSMUST00000054294.4
frizzled homolog 1 (Drosophila)
chr11_+_102604370 0.21 ENSMUST00000057893.5
frizzled homolog 2 (Drosophila)
chr12_+_51377560 0.16 ENSMUST00000021335.5
Sec1 family domain containing 1
chr19_-_4163285 0.14 ENSMUST00000118483.1
ENSMUST00000025749.7
ribosomal protein S6 kinase, polypeptide 2
chr11_-_69369377 0.11 ENSMUST00000092971.6
ENSMUST00000108661.1
chromodomain helicase DNA binding protein 3
chr1_+_74391479 0.11 ENSMUST00000027367.7
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr10_+_26822560 0.09 ENSMUST00000135866.1
Rho GTPase activating protein 18
chrX_+_136927320 0.07 ENSMUST00000059808.3
H2B histone family, member M
chr7_+_43966739 0.06 ENSMUST00000078835.2
kallikrein 1-related peptidase b1
chr5_-_142817387 0.06 ENSMUST00000036253.6
trinucleotide repeat containing 18
chr5_-_144965793 0.06 ENSMUST00000110677.1
ENSMUST00000085684.4
ENSMUST00000100461.2
SMAD specific E3 ubiquitin protein ligase 1
chr2_+_97467657 0.05 ENSMUST00000059049.7
leucine rich repeat containing 4C
chr15_-_99474696 0.05 ENSMUST00000040313.4
BCDIN3 domain containing
chr18_+_42053648 0.03 ENSMUST00000072008.4
SH3 domain containing ring finger 2
chr18_+_42053692 0.03 ENSMUST00000074679.3
SH3 domain containing ring finger 2

Network of associatons between targets according to the STRING database.

First level regulatory network of Prdm4

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0060022 hard palate development(GO:0060022)
0.0 0.2 GO:0071493 cellular response to UV-B(GO:0071493)
0.0 0.1 GO:0003220 left ventricular cardiac muscle tissue morphogenesis(GO:0003220)
0.0 0.1 GO:0071211 protein targeting to vacuole involved in autophagy(GO:0071211)
0.0 0.2 GO:1902902 negative regulation of autophagosome assembly(GO:1902902)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0017119 Golgi transport complex(GO:0017119)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0004711 ribosomal protein S6 kinase activity(GO:0004711)
0.0 0.2 GO:0008301 DNA binding, bending(GO:0008301)
0.0 0.4 GO:0042813 Wnt-activated receptor activity(GO:0042813)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 PID WNT SIGNALING PATHWAY Wnt signaling network