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2D miR_HR1_12

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Results for AGCAGCG

Z-value: 0.63

Motif logo

miRNA associated with seed AGCAGCG

NamemiRBASE accession
MIMAT0003188

Activity profile of AGCAGCG motif

Sorted Z-values of AGCAGCG motif

Promoter Log-likelihood Transcript Gene Gene Info
chr9_-_61946768 1.60 ENSMUST00000034815.7
kinesin family member 23
chr7_-_38107490 1.42 ENSMUST00000108023.3
cyclin E1
chr14_+_45351473 1.31 ENSMUST00000111835.2
serine/threonine/tyrosine interaction protein
chr11_-_87108656 1.28 ENSMUST00000051395.8
proline rich 11
chr4_+_101419277 0.98 ENSMUST00000102780.1
ENSMUST00000106946.1
ENSMUST00000106945.1
adenylate kinase 4
chr9_-_36726374 0.91 ENSMUST00000172702.2
ENSMUST00000172742.1
ENSMUST00000034625.5
checkpoint kinase 1
chr8_+_117157972 0.86 ENSMUST00000064488.4
ENSMUST00000162997.1
giant axonal neuropathy
chr1_-_21961581 0.68 ENSMUST00000029667.6
ENSMUST00000173058.1
ENSMUST00000173404.1
potassium voltage-gated channel, subfamily Q, member 5
chr12_-_98577940 0.63 ENSMUST00000110113.1
potassium channel, subfamily K, member 10
chr11_-_45944910 0.59 ENSMUST00000129820.1
U7 snRNP-specific Sm-like protein LSM11
chr3_+_138526174 0.53 ENSMUST00000029803.7
eukaryotic translation initiation factor 4E
chr17_-_28622479 0.51 ENSMUST00000130643.1
serine/arginine-rich protein specific kinase 1
chr14_+_14820765 0.50 ENSMUST00000112631.2
ENSMUST00000178538.1
ENSMUST00000112630.2
NIMA (never in mitosis gene a)- related kinase 10
chr12_-_112829351 0.48 ENSMUST00000062092.5
cell division cycle associated 4
chr3_+_145987835 0.48 ENSMUST00000039517.6
synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr3_+_51415986 0.48 ENSMUST00000029303.7
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr11_-_63922257 0.43 ENSMUST00000094103.3
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
chr9_+_108692116 0.42 ENSMUST00000035220.6
protein kinase, cAMP dependent regulatory, type II alpha
chr14_-_69284982 0.42 ENSMUST00000183882.1
ENSMUST00000037064.4
solute carrier family 25, member 37
chr19_+_36926071 0.41 ENSMUST00000099494.3
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
chr8_+_22476700 0.39 ENSMUST00000067786.7
solute carrier family 20, member 2
chr1_-_106759727 0.39 ENSMUST00000010049.4
3-ketodihydrosphingosine reductase
chr17_-_31855782 0.39 ENSMUST00000024839.4
salt inducible kinase 1
chr7_+_110018301 0.37 ENSMUST00000084731.3
importin 7
chrX_-_48034842 0.35 ENSMUST00000039026.7
apelin
chrX_+_36328353 0.34 ENSMUST00000016383.3
LON peptidase N-terminal domain and ring finger 3
chr5_-_99252839 0.33 ENSMUST00000168092.1
ENSMUST00000031276.8
RasGEF domain family, member 1B
chr7_+_28179469 0.33 ENSMUST00000085901.6
ENSMUST00000172761.1
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
chr12_-_108003594 0.31 ENSMUST00000066060.4
B cell leukemia/lymphoma 11B
chr6_+_140424086 0.30 ENSMUST00000087622.3
pleckstrin homology domain containing, family A member 5
chr19_-_59345746 0.30 ENSMUST00000099274.2
PDZ domain containing 8
chr1_-_162740350 0.28 ENSMUST00000182331.1
ENSMUST00000183011.1
ENSMUST00000182593.1
ENSMUST00000182149.1
proline-rich coiled-coil 2C
chr15_+_103240405 0.28 ENSMUST00000036004.9
ENSMUST00000087351.7
heterogeneous nuclear ribonucleoprotein A1
chr15_-_9529868 0.27 ENSMUST00000003981.4
interleukin 7 receptor
chr10_+_13090788 0.25 ENSMUST00000121646.1
ENSMUST00000121325.1
ENSMUST00000121766.1
pleiomorphic adenoma gene-like 1
chr10_-_85916902 0.25 ENSMUST00000037646.7
PR domain containing 4
chr4_+_80910646 0.25 ENSMUST00000055922.3
leucine rich adaptor protein 1-like
chr9_+_51765325 0.24 ENSMUST00000065496.5
Rho GTPase activating protein 20
chr7_+_18925863 0.23 ENSMUST00000172835.1
ENSMUST00000032571.8
neuro-oncological ventral antigen 2
chr8_+_83900096 0.23 ENSMUST00000141158.1
latrophilin 1
chr5_-_89883321 0.20 ENSMUST00000163159.1
ENSMUST00000061427.5
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
chr7_-_118584669 0.20 ENSMUST00000044195.4
transmembrane channel-like gene family 7
chr1_-_106714217 0.20 ENSMUST00000112751.1
B cell leukemia/lymphoma 2
chr17_-_42876417 0.20 ENSMUST00000024709.7
CD2-associated protein
chr13_-_103764502 0.18 ENSMUST00000074616.5
splicing regulatory glutamine/lysine-rich protein 1
chr3_+_98382438 0.17 ENSMUST00000056096.8
zinc finger protein 697
chr1_-_152090308 0.17 ENSMUST00000044581.7
RIKEN cDNA 1700025G04 gene
chr17_+_15499888 0.17 ENSMUST00000159197.1
ENSMUST00000162505.1
ENSMUST00000014911.5
ENSMUST00000147081.2
ENSMUST00000118001.1
ENSMUST00000143924.1
ENSMUST00000119879.2
ENSMUST00000155051.1
ENSMUST00000117593.1
TATA box binding protein
chr19_-_60581013 0.16 ENSMUST00000111460.3
ENSMUST00000081790.7
ENSMUST00000166712.1
CDK2 associated, cullin domain 1
chr3_-_122984404 0.16 ENSMUST00000090379.2
ubiquitin specific peptidase 53
chr4_-_141790891 0.16 ENSMUST00000038014.4
ENSMUST00000153880.1
DnaJ (Hsp40) homolog, subfamily C, member 16
chr4_+_139574697 0.15 ENSMUST00000174078.1
intermediate filament family orphan 2
chr7_+_101108768 0.15 ENSMUST00000098250.3
ENSMUST00000032931.7
FCH and double SH3 domains 2
chr1_-_46854046 0.15 ENSMUST00000027131.4
solute carrier family 39 (zinc transporter), member 10
chr5_-_145140238 0.14 ENSMUST00000031627.8
PDGFA associated protein 1
chr4_-_56947411 0.13 ENSMUST00000107609.3
ENSMUST00000068792.6
transmembrane protein 245
chr19_+_5447692 0.13 ENSMUST00000025850.5
fos-like antigen 1
chr7_-_118491912 0.12 ENSMUST00000178344.1
inositol 1,4,5-triphosphate receptor interacting protein-like 2
chr1_+_60746358 0.12 ENSMUST00000027165.2
CD28 antigen
chr2_+_49619277 0.11 ENSMUST00000028102.7
kinesin family member 5C
chr13_+_49421229 0.11 ENSMUST00000021817.8
inositol 1,3,4,5,6-pentakisphosphate 2-kinase
chr17_+_45523416 0.10 ENSMUST00000113547.1
t-complex-associated testis expressed 1
chr1_+_64690443 0.10 ENSMUST00000114077.1
cyclin Y-like 1
chr11_+_58009064 0.10 ENSMUST00000071487.6
ENSMUST00000178636.1
La ribonucleoprotein domain family, member 1
chr14_+_56887795 0.10 ENSMUST00000022511.8
zinc finger, MYM-type 2
chr2_+_68117713 0.09 ENSMUST00000112346.2
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
chr5_+_32136458 0.09 ENSMUST00000031017.9
fos-like antigen 2
chr18_-_46198810 0.09 ENSMUST00000167364.1
tripartite motif-containing 36
chr8_+_88521344 0.08 ENSMUST00000034086.5
naked cuticle 1 homolog (Drosophila)
chr4_-_136835843 0.08 ENSMUST00000105846.2
ENSMUST00000059287.7
ENSMUST00000105845.2
Eph receptor B2
chr5_-_146795002 0.08 ENSMUST00000085614.5
ubiquitin specific peptidase 12
chr11_-_73177002 0.07 ENSMUST00000108480.1
ENSMUST00000054952.3
ER membrane protein complex subunit 6
chr1_-_75479271 0.07 ENSMUST00000079205.7
ENSMUST00000094818.2
chondroitin polymerizing factor
chr1_+_55131231 0.07 ENSMUST00000162364.1
ENSMUST00000159311.1
MOB family member 4, phocein
chr11_+_106036867 0.07 ENSMUST00000058438.8
DDB1 and CUL4 associated factor 7
chr11_+_16257706 0.07 ENSMUST00000109645.2
ENSMUST00000109647.2
V-set and transmembrane domain containing 2A
chr7_+_110122299 0.07 ENSMUST00000033326.8
WEE 1 homolog 1 (S. pombe)
chr11_-_20112876 0.06 ENSMUST00000000137.7
ARP2 actin-related protein 2
chr13_-_98891036 0.06 ENSMUST00000109399.2
transportin 1
chr4_-_114987220 0.06 ENSMUST00000030491.8
cytidine monophosphate (UMP-CMP) kinase 1
chr7_-_121707253 0.06 ENSMUST00000046929.6
ubiquitin specific peptidase 31
chr19_+_4711153 0.06 ENSMUST00000008991.6
spectrin beta, non-erythrocytic 2
chr8_+_105900421 0.06 ENSMUST00000049699.8
protein serine kinase H1
chr16_-_46010212 0.06 ENSMUST00000130481.1
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr8_-_64205970 0.05 ENSMUST00000066166.4
tolloid-like
chr1_-_135585314 0.05 ENSMUST00000040599.8
ENSMUST00000067414.6
neuron navigator 1
chr10_-_127060163 0.05 ENSMUST00000040307.5
membrane-associated ring finger (C3HC4) 9
chr15_+_84923383 0.04 ENSMUST00000165443.2
nucleoporin 50
chr15_+_25984359 0.04 ENSMUST00000061875.6
zinc finger protein 622
chrX_-_136868537 0.04 ENSMUST00000058814.6
RAB9B, member RAS oncogene family
chr11_+_75679259 0.04 ENSMUST00000017920.7
ENSMUST00000108426.1
ENSMUST00000108425.1
ENSMUST00000093115.3
v-crk sarcoma virus CT10 oncogene homolog (avian)
chr9_-_108190352 0.04 ENSMUST00000035208.7
bassoon
chr4_+_108619925 0.04 ENSMUST00000030320.6
coiled-coil and C2 domain containing 1B
chr19_-_19001099 0.04 ENSMUST00000040153.8
ENSMUST00000112828.1
RAR-related orphan receptor beta
chr5_+_88886809 0.04 ENSMUST00000148750.1
solute carrier family 4 (anion exchanger), member 4
chr4_-_126429501 0.03 ENSMUST00000069097.6
argonaute RISC catalytic subunit 3
chr8_-_104443001 0.02 ENSMUST00000041769.6
dynein, cytoplasmic 1 light intermediate chain 2
chr11_-_82890541 0.02 ENSMUST00000092844.6
ENSMUST00000021033.9
ENSMUST00000018985.8
RAD51 homolog D
chr6_-_115675871 0.02 ENSMUST00000112949.1
v-raf-leukemia viral oncogene 1
chr1_+_9798123 0.02 ENSMUST00000168907.1
ENSMUST00000166384.1
serum/glucocorticoid regulated kinase 3
chr5_+_121220191 0.02 ENSMUST00000119892.2
ENSMUST00000042614.6
predicted gene 15800
chr12_-_56535047 0.01 ENSMUST00000178477.2
NK2 homeobox 1
chr8_+_111033890 0.01 ENSMUST00000034441.7
alanyl-tRNA synthetase
chr18_-_88894322 0.01 ENSMUST00000070116.5
ENSMUST00000125362.1
suppressor of cytokine signaling 6
chr11_+_107547925 0.01 ENSMUST00000100305.1
ENSMUST00000075012.1
ENSMUST00000106746.1
helicase with zinc finger domain
chr15_-_76069681 0.00 ENSMUST00000002603.5
ENSMUST00000063747.5
scribbled homolog (Drosophila)
chr11_-_70669283 0.00 ENSMUST00000129434.1
ENSMUST00000018431.6
sperm associated antigen 7
chr7_+_67952817 0.00 ENSMUST00000005671.8
insulin-like growth factor I receptor

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCAGCG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0000912 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837)
0.4 1.3 GO:0045204 MAPK export from nucleus(GO:0045204)
0.1 0.3 GO:0051466 corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397) positive regulation of corticotropin-releasing hormone secretion(GO:0051466) regulation of G-protein coupled receptor internalization(GO:1904020)
0.1 0.3 GO:0097534 lymphoid lineage cell migration(GO:0097534) lymphoid lineage cell migration into thymus(GO:0097535)
0.1 0.9 GO:0006975 DNA damage induced protein phosphorylation(GO:0006975)
0.1 0.4 GO:0032792 negative regulation of CREB transcription factor activity(GO:0032792)
0.1 0.5 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.2 GO:0048743 positive regulation of skeletal muscle fiber development(GO:0048743)
0.1 0.6 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.6 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.4 GO:0006477 protein sulfation(GO:0006477)
0.0 1.0 GO:0046033 AMP metabolic process(GO:0046033)
0.0 0.4 GO:0035562 negative regulation of chromatin binding(GO:0035562)
0.0 0.2 GO:1900748 positive regulation of vascular endothelial growth factor signaling pathway(GO:1900748)
0.0 0.1 GO:1901355 response to rapamycin(GO:1901355)
0.0 0.2 GO:0032911 negative regulation of transforming growth factor beta1 production(GO:0032911)
0.0 1.3 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.2 GO:0001915 negative regulation of T cell mediated cytotoxicity(GO:0001915)
0.0 0.4 GO:2000480 negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.0 0.4 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 0.1 GO:0070343 white fat cell proliferation(GO:0070343) regulation of white fat cell proliferation(GO:0070350)
0.0 0.1 GO:0016344 meiotic chromosome movement towards spindle pole(GO:0016344)
0.0 0.5 GO:0071549 cellular response to dexamethasone stimulus(GO:0071549)
0.0 0.1 GO:0009197 dUDP biosynthetic process(GO:0006227) pyrimidine nucleoside diphosphate metabolic process(GO:0009138) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine deoxyribonucleoside diphosphate metabolic process(GO:0009196) pyrimidine deoxyribonucleoside diphosphate biosynthetic process(GO:0009197) dUDP metabolic process(GO:0046077)
0.0 0.1 GO:0098961 dendritic transport of ribonucleoprotein complex(GO:0098961) dendritic transport of messenger ribonucleoprotein complex(GO:0098963) anterograde dendritic transport of messenger ribonucleoprotein complex(GO:0098964)
0.0 0.1 GO:0007296 vitellogenesis(GO:0007296)
0.0 0.1 GO:0050861 positive regulation of B cell receptor signaling pathway(GO:0050861)
0.0 0.4 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.5 GO:0045070 positive regulation of viral genome replication(GO:0045070)
0.0 0.1 GO:0021631 optic nerve morphogenesis(GO:0021631)
0.0 0.0 GO:1990859 cellular response to endothelin(GO:1990859)
0.0 0.0 GO:0098928 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.1 GO:0048304 positive regulation of isotype switching to IgG isotypes(GO:0048304)
0.0 0.1 GO:0019375 galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 GO:0097149 centralspindlin complex(GO:0097149)
0.1 0.6 GO:0005683 U7 snRNP(GO:0005683)
0.1 0.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.5 GO:0031415 NatA complex(GO:0031415)
0.0 0.2 GO:0000120 RNA polymerase I transcription factor complex(GO:0000120)
0.0 0.4 GO:0005952 cAMP-dependent protein kinase complex(GO:0005952)
0.0 1.4 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:1903349 omegasome membrane(GO:1903349)
0.0 0.0 GO:1990257 piccolo-bassoon transport vesicle(GO:1990257)
0.0 0.9 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)
0.3 0.9 GO:0035402 histone kinase activity (H3-T11 specific)(GO:0035402)
0.2 0.6 GO:0071209 U7 snRNA binding(GO:0071209)
0.1 0.4 GO:0015319 sodium:inorganic phosphate symporter activity(GO:0015319)
0.1 0.4 GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.1 0.2 GO:0001034 RNA polymerase III transcription factor activity, sequence-specific DNA binding(GO:0001034) RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly(GO:0001129) RNA polymerase II transcription factor activity, TBP-class protein binding(GO:0001132)
0.1 0.5 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.6 GO:0022841 potassium ion leak channel activity(GO:0022841)
0.0 1.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.4 GO:0008140 cAMP response element binding protein binding(GO:0008140)
0.0 0.4 GO:0008603 cAMP-dependent protein kinase regulator activity(GO:0008603)
0.0 0.4 GO:0015093 ferrous iron transmembrane transporter activity(GO:0015093)
0.0 0.1 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.5 GO:0004596 peptide alpha-N-acetyltransferase activity(GO:0004596)
0.0 0.1 GO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity(GO:0050510)
0.0 0.1 GO:0047275 glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275)
0.0 0.1 GO:0034190 apolipoprotein receptor binding(GO:0034190)
0.0 0.1 GO:0009041 uridylate kinase activity(GO:0009041)
0.0 0.2 GO:0051434 BH3 domain binding(GO:0051434)
0.0 0.3 GO:0010314 phosphatidylinositol-5-phosphate binding(GO:0010314)
0.0 1.6 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.2 GO:1990226 histone methyltransferase binding(GO:1990226)
0.0 0.2 GO:0005172 vascular endothelial growth factor receptor binding(GO:0005172)
0.0 0.3 GO:0071855 neuropeptide receptor binding(GO:0071855)
0.0 0.1 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.1 1.4 SA REG CASCADE OF CYCLIN EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0 1.5 PID AURORA B PATHWAY Aurora B signaling
0.0 0.2 SA FAS SIGNALING The TNF-type receptor Fas induces apoptosis on ligand binding.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 1.4 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.6 REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS Genes involved in Tandem pore domain potassium channels
0.1 1.6 REACTOME KINESINS Genes involved in Kinesins
0.0 0.6 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.5 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.4 REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB Genes involved in PKA-mediated phosphorylation of CREB
0.0 0.7 REACTOME VOLTAGE GATED POTASSIUM CHANNELS Genes involved in Voltage gated Potassium channels
0.0 0.2 REACTOME IL 7 SIGNALING Genes involved in Interleukin-7 signaling
0.0 0.4 REACTOME HS GAG BIOSYNTHESIS Genes involved in HS-GAG biosynthesis