2D miR_HR1_12
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Zkscan3
|
ENSMUSG00000021327.12 | zinc finger with KRAB and SCAN domains 3 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zkscan3 | mm10_v2_chr13_-_21402688_21402755 | 0.34 | 2.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_100786402 | 1.83 |
ENSMUST00000174038.1
ENSMUST00000091295.7 ENSMUST00000072119.8 |
Ccnb1
|
cyclin B1 |
chr5_-_100572192 | 0.90 |
ENSMUST00000031264.5
|
Plac8
|
placenta-specific 8 |
chr5_+_120649188 | 0.82 |
ENSMUST00000156722.1
|
Rasal1
|
RAS protein activator like 1 (GAP1 like) |
chr7_+_19518731 | 0.73 |
ENSMUST00000078908.4
|
Nkpd1
|
NTPase, KAP family P-loop domain containing 1 |
chr3_+_79629074 | 0.60 |
ENSMUST00000029388.8
|
4930579G24Rik
|
RIKEN cDNA 4930579G24 gene |
chr2_+_118772766 | 0.56 |
ENSMUST00000130293.1
ENSMUST00000061360.3 |
Phgr1
|
proline/histidine/glycine-rich 1 |
chr8_+_106893616 | 0.51 |
ENSMUST00000047629.5
|
Cirh1a
|
cirrhosis, autosomal recessive 1A (human) |
chr12_-_69724830 | 0.46 |
ENSMUST00000021370.8
|
L2hgdh
|
L-2-hydroxyglutarate dehydrogenase |
chr6_+_71199827 | 0.42 |
ENSMUST00000067492.7
|
Fabp1
|
fatty acid binding protein 1, liver |
chr7_+_101896340 | 0.40 |
ENSMUST00000035395.7
ENSMUST00000106973.1 ENSMUST00000144207.1 |
Anapc15
|
anaphase prompoting complex C subunit 15 |
chr13_-_38658991 | 0.38 |
ENSMUST00000001757.7
|
Eef1e1
|
eukaryotic translation elongation factor 1 epsilon 1 |
chr1_-_65123108 | 0.35 |
ENSMUST00000050047.3
ENSMUST00000148020.1 |
D630023F18Rik
|
RIKEN cDNA D630023F18 gene |
chr2_+_31670714 | 0.34 |
ENSMUST00000038474.7
ENSMUST00000137156.1 |
Exosc2
|
exosome component 2 |
chr19_-_10869757 | 0.34 |
ENSMUST00000120524.1
ENSMUST00000025645.7 |
Tmem132a
|
transmembrane protein 132A |
chr10_+_75568641 | 0.31 |
ENSMUST00000131565.1
|
Ggt1
|
gamma-glutamyltransferase 1 |
chr11_+_87405049 | 0.30 |
ENSMUST00000060835.5
|
Tex14
|
testis expressed gene 14 |
chr10_+_75568630 | 0.29 |
ENSMUST00000145928.1
|
Ggt1
|
gamma-glutamyltransferase 1 |
chr11_-_75422524 | 0.29 |
ENSMUST00000125982.1
ENSMUST00000137103.1 |
Serpinf1
|
serine (or cysteine) peptidase inhibitor, clade F, member 1 |
chr7_-_81345189 | 0.28 |
ENSMUST00000080813.4
|
Rps17
|
ribosomal protein S17 |
chr10_+_75568648 | 0.26 |
ENSMUST00000134503.1
ENSMUST00000125770.1 ENSMUST00000128886.1 ENSMUST00000151212.1 |
Ggt1
|
gamma-glutamyltransferase 1 |
chr13_-_104109576 | 0.26 |
ENSMUST00000109315.3
|
Nln
|
neurolysin (metallopeptidase M3 family) |
chr17_-_24150910 | 0.26 |
ENSMUST00000052462.6
|
Pdpk1
|
3-phosphoinositide dependent protein kinase 1 |
chr11_-_100650693 | 0.25 |
ENSMUST00000103119.3
|
Zfp385c
|
zinc finger protein 385C |
chr11_-_88851462 | 0.24 |
ENSMUST00000107903.1
|
Akap1
|
A kinase (PRKA) anchor protein 1 |
chr11_-_102218923 | 0.24 |
ENSMUST00000131254.1
|
Hdac5
|
histone deacetylase 5 |
chr17_-_34517352 | 0.23 |
ENSMUST00000075483.4
|
Btnl6
|
butyrophilin-like 6 |
chr13_+_104109752 | 0.23 |
ENSMUST00000160322.1
ENSMUST00000159574.1 |
Sgtb
|
small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta |
chr8_+_124897877 | 0.22 |
ENSMUST00000034467.5
|
Sprtn
|
SprT-like N-terminal domain |
chr8_+_70616816 | 0.22 |
ENSMUST00000052437.3
|
Lrrc25
|
leucine rich repeat containing 25 |
chr7_+_126759601 | 0.21 |
ENSMUST00000050201.4
ENSMUST00000057669.9 |
Mapk3
|
mitogen-activated protein kinase 3 |
chr1_+_37997975 | 0.18 |
ENSMUST00000027252.7
|
Eif5b
|
eukaryotic translation initiation factor 5B |
chr18_+_67800101 | 0.18 |
ENSMUST00000025425.5
|
Cep192
|
centrosomal protein 192 |
chr17_-_35673517 | 0.17 |
ENSMUST00000162266.1
ENSMUST00000160734.1 ENSMUST00000159852.1 ENSMUST00000160039.1 |
Gtf2h4
|
general transcription factor II H, polypeptide 4 |
chr9_+_114688782 | 0.17 |
ENSMUST00000047404.6
|
Dync1li1
|
dynein cytoplasmic 1 light intermediate chain 1 |
chr6_-_122856151 | 0.16 |
ENSMUST00000042081.8
|
C3ar1
|
complement component 3a receptor 1 |
chr7_-_98178254 | 0.16 |
ENSMUST00000040971.7
|
Capn5
|
calpain 5 |
chr17_-_34475937 | 0.15 |
ENSMUST00000065841.4
|
Btnl4
|
butyrophilin-like 4 |
chr8_-_106893581 | 0.15 |
ENSMUST00000176437.1
ENSMUST00000177068.1 ENSMUST00000169312.1 ENSMUST00000176515.1 |
Chtf8
|
CTF8, chromosome transmission fidelity factor 8 |
chr14_-_32685246 | 0.15 |
ENSMUST00000096038.3
|
3425401B19Rik
|
RIKEN cDNA 3425401B19 gene |
chr1_+_135232045 | 0.13 |
ENSMUST00000110798.3
|
Gm4204
|
predicted gene 4204 |
chr8_+_33732237 | 0.12 |
ENSMUST00000171010.1
|
Gtf2e2
|
general transcription factor II E, polypeptide 2 (beta subunit) |
chr5_-_88675613 | 0.12 |
ENSMUST00000113234.1
ENSMUST00000153565.1 |
Grsf1
|
G-rich RNA sequence binding factor 1 |
chr2_+_121171204 | 0.11 |
ENSMUST00000039541.5
ENSMUST00000110657.1 |
Tubgcp4
|
tubulin, gamma complex associated protein 4 |
chr1_-_39651165 | 0.11 |
ENSMUST00000053355.4
|
Creg2
|
cellular repressor of E1A-stimulated genes 2 |
chr2_+_121295437 | 0.11 |
ENSMUST00000110639.1
|
Map1a
|
microtubule-associated protein 1 A |
chr8_+_31091593 | 0.11 |
ENSMUST00000161713.1
|
Dusp26
|
dual specificity phosphatase 26 (putative) |
chr8_-_106893515 | 0.11 |
ENSMUST00000176090.1
|
Chtf8
|
CTF8, chromosome transmission fidelity factor 8 |
chr13_+_104109737 | 0.11 |
ENSMUST00000044385.7
|
Sgtb
|
small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta |
chr11_+_116918844 | 0.11 |
ENSMUST00000103027.3
|
Mgat5b
|
mannoside acetylglucosaminyltransferase 5, isoenzyme B |
chr11_-_75422586 | 0.10 |
ENSMUST00000138661.1
ENSMUST00000000769.7 |
Serpinf1
|
serine (or cysteine) peptidase inhibitor, clade F, member 1 |
chr17_+_46110982 | 0.10 |
ENSMUST00000024763.3
ENSMUST00000123646.1 |
Mrps18a
|
mitochondrial ribosomal protein S18A |
chr7_+_43609907 | 0.10 |
ENSMUST00000116324.2
|
Zfp819
|
zinc finger protein 819 |
chr10_+_89744988 | 0.10 |
ENSMUST00000020112.5
|
Uhrf1bp1l
|
UHRF1 (ICBP90) binding protein 1-like |
chr1_-_92902883 | 0.10 |
ENSMUST00000160548.1
ENSMUST00000112998.1 |
Ankmy1
|
ankyrin repeat and MYND domain containing 1 |
chr2_+_156613664 | 0.10 |
ENSMUST00000169464.2
ENSMUST00000109567.3 |
Dlgap4
|
discs, large homolog-associated protein 4 (Drosophila) |
chr11_-_102365111 | 0.10 |
ENSMUST00000006749.9
|
Slc4a1
|
solute carrier family 4 (anion exchanger), member 1 |
chr4_+_139192899 | 0.09 |
ENSMUST00000102508.3
ENSMUST00000131912.1 ENSMUST00000102507.3 |
Capzb
|
capping protein (actin filament) muscle Z-line, beta |
chr16_-_16359016 | 0.09 |
ENSMUST00000023477.7
ENSMUST00000096229.3 ENSMUST00000115749.1 |
Dnm1l
|
dynamin 1-like |
chr13_+_44730726 | 0.09 |
ENSMUST00000173704.1
ENSMUST00000044608.7 ENSMUST00000173367.1 |
Jarid2
|
jumonji, AT rich interactive domain 2 |
chr8_-_13200576 | 0.09 |
ENSMUST00000165605.2
|
Grtp1
|
GH regulated TBC protein 1 |
chr17_-_35673738 | 0.08 |
ENSMUST00000001565.8
|
Gtf2h4
|
general transcription factor II H, polypeptide 4 |
chr2_+_121171155 | 0.08 |
ENSMUST00000110658.1
|
Tubgcp4
|
tubulin, gamma complex associated protein 4 |
chr6_-_43309554 | 0.07 |
ENSMUST00000031749.9
|
Nobox
|
NOBOX oogenesis homeobox |
chr8_-_72009619 | 0.07 |
ENSMUST00000003574.4
|
Cyp4f18
|
cytochrome P450, family 4, subfamily f, polypeptide 18 |
chr18_-_77713978 | 0.06 |
ENSMUST00000074653.4
|
8030462N17Rik
|
RIKEN cDNA 8030462N17 gene |
chr16_-_38433145 | 0.06 |
ENSMUST00000002926.6
|
Pla1a
|
phospholipase A1 member A |
chr10_+_80629646 | 0.05 |
ENSMUST00000085435.5
|
Csnk1g2
|
casein kinase 1, gamma 2 |
chr18_+_61105844 | 0.05 |
ENSMUST00000115268.3
|
Csf1r
|
colony stimulating factor 1 receptor |
chr12_+_84641019 | 0.04 |
ENSMUST00000166772.2
|
Vrtn
|
vertebrae development associated |
chr11_-_33578933 | 0.04 |
ENSMUST00000020366.1
ENSMUST00000135350.1 |
Gabrp
|
gamma-aminobutyric acid (GABA) A receptor, pi |
chr18_-_34651703 | 0.04 |
ENSMUST00000025228.5
ENSMUST00000133181.1 |
Cdc23
|
CDC23 cell division cycle 23 |
chr1_+_132298606 | 0.04 |
ENSMUST00000046071.4
|
Klhdc8a
|
kelch domain containing 8A |
chr17_-_29519790 | 0.03 |
ENSMUST00000168877.1
|
Gm17657
|
predicted gene, 17657 |
chr1_+_160978576 | 0.03 |
ENSMUST00000064725.5
|
Serpinc1
|
serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 |
chr6_-_142473075 | 0.02 |
ENSMUST00000032371.7
|
Gys2
|
glycogen synthase 2 |
chr8_-_70760889 | 0.02 |
ENSMUST00000038626.8
|
Mpv17l2
|
MPV17 mitochondrial membrane protein-like 2 |
chr1_+_131638485 | 0.02 |
ENSMUST00000112411.1
|
Ctse
|
cathepsin E |
chr5_-_88675190 | 0.02 |
ENSMUST00000133532.1
ENSMUST00000150438.1 |
Grsf1
|
G-rich RNA sequence binding factor 1 |
chr13_+_73467197 | 0.02 |
ENSMUST00000022099.8
|
Lpcat1
|
lysophosphatidylcholine acyltransferase 1 |
chr19_+_45998131 | 0.01 |
ENSMUST00000181820.1
|
4930505N22Rik
|
RIKEN cDNA 4930505N22 gene |
chr1_+_131638306 | 0.01 |
ENSMUST00000073350.6
|
Ctse
|
cathepsin E |
chr11_+_115912001 | 0.01 |
ENSMUST00000132961.1
|
Smim6
|
small integral membrane protein 6 |
chr2_+_155775333 | 0.00 |
ENSMUST00000029141.5
|
Mmp24
|
matrix metallopeptidase 24 |
chr8_-_124897685 | 0.00 |
ENSMUST00000098312.2
|
Exoc8
|
exocyst complex component 8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 1.8 | GO:0031660 | regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031660) positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031662) |
0.1 | 0.9 | GO:1901750 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 0.3 | GO:1902809 | regulation of skeletal muscle fiber differentiation(GO:1902809) |
0.1 | 0.3 | GO:0071051 | CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051) |
0.1 | 0.2 | GO:0045062 | extrathymic T cell selection(GO:0045062) |
0.1 | 0.4 | GO:2000774 | positive regulation of cellular senescence(GO:2000774) |
0.1 | 0.2 | GO:0000189 | MAPK import into nucleus(GO:0000189) |
0.0 | 0.3 | GO:0032466 | negative regulation of cytokinesis(GO:0032466) |
0.0 | 0.6 | GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504) |
0.0 | 0.1 | GO:1902310 | positive regulation of peptidyl-serine dephosphorylation(GO:1902310) |
0.0 | 0.4 | GO:0060770 | negative regulation of epithelial cell proliferation involved in prostate gland development(GO:0060770) |
0.0 | 0.2 | GO:0002461 | tolerance induction dependent upon immune response(GO:0002461) |
0.0 | 0.1 | GO:1904579 | response to thapsigargin(GO:1904578) cellular response to thapsigargin(GO:1904579) |
0.0 | 0.8 | GO:1903861 | positive regulation of dendrite extension(GO:1903861) |
0.0 | 0.2 | GO:0051534 | negative regulation of NFAT protein import into nucleus(GO:0051534) |
0.0 | 0.3 | GO:1900262 | regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264) |
0.0 | 0.4 | GO:0032000 | positive regulation of fatty acid beta-oxidation(GO:0032000) |
0.0 | 0.2 | GO:0051415 | interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418) |
0.0 | 0.9 | GO:0040015 | negative regulation of multicellular organism growth(GO:0040015) |
0.0 | 0.1 | GO:0042374 | menaquinone metabolic process(GO:0009233) phylloquinone metabolic process(GO:0042374) phylloquinone catabolic process(GO:0042376) quinone catabolic process(GO:1901662) |
0.0 | 0.2 | GO:0048742 | regulation of skeletal muscle fiber development(GO:0048742) |
0.0 | 0.2 | GO:0019985 | translesion synthesis(GO:0019985) |
0.0 | 0.3 | GO:0070816 | phosphorylation of RNA polymerase II C-terminal domain(GO:0070816) |
0.0 | 0.3 | GO:0006972 | hyperosmotic response(GO:0006972) |
0.0 | 0.3 | GO:0000028 | ribosomal small subunit assembly(GO:0000028) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.8 | GO:0000942 | condensed nuclear chromosome outer kinetochore(GO:0000942) |
0.1 | 0.3 | GO:0000438 | core TFIIH complex portion of holo TFIIH complex(GO:0000438) |
0.0 | 0.8 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
0.0 | 0.1 | GO:0005673 | transcription factor TFIIE complex(GO:0005673) |
0.0 | 0.4 | GO:0043203 | axon hillock(GO:0043203) |
0.0 | 0.3 | GO:0000176 | nuclear exosome (RNase complex)(GO:0000176) |
0.0 | 0.4 | GO:0045179 | apical cortex(GO:0045179) |
0.0 | 0.3 | GO:0031390 | Ctf18 RFC-like complex(GO:0031390) |
0.0 | 0.2 | GO:0000923 | equatorial microtubule organizing center(GO:0000923) |
0.0 | 0.2 | GO:0090571 | RNA polymerase II transcription repressor complex(GO:0090571) |
0.0 | 0.4 | GO:0017101 | aminoacyl-tRNA synthetase multienzyme complex(GO:0017101) |
0.0 | 0.4 | GO:0005680 | anaphase-promoting complex(GO:0005680) |
0.0 | 0.0 | GO:1990682 | CSF1-CSF1R complex(GO:1990682) |
0.0 | 0.1 | GO:0071203 | WASH complex(GO:0071203) |
0.0 | 0.2 | GO:0030061 | mitochondrial crista(GO:0030061) |
0.0 | 0.2 | GO:0031143 | pseudopodium(GO:0031143) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.8 | GO:0061575 | cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575) |
0.1 | 0.9 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.1 | 0.4 | GO:0005324 | long-chain fatty acid transporter activity(GO:0005324) |
0.1 | 0.3 | GO:0070012 | oligopeptidase activity(GO:0070012) |
0.0 | 0.1 | GO:0004647 | phosphoserine phosphatase activity(GO:0004647) |
0.0 | 0.2 | GO:0001226 | RNA polymerase II transcription corepressor binding(GO:0001226) |
0.0 | 0.3 | GO:0033170 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
0.0 | 0.1 | GO:0052871 | tocopherol omega-hydroxylase activity(GO:0052870) alpha-tocopherol omega-hydroxylase activity(GO:0052871) |
0.0 | 0.2 | GO:0004875 | complement receptor activity(GO:0004875) |
0.0 | 0.1 | GO:0030144 | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144) |
0.0 | 0.2 | GO:0051011 | microtubule minus-end binding(GO:0051011) |
0.0 | 0.3 | GO:0060229 | phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229) |
0.0 | 0.2 | GO:0030346 | protein phosphatase 2B binding(GO:0030346) |
0.0 | 0.3 | GO:0008353 | RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) |
0.0 | 0.2 | GO:0004707 | MAP kinase activity(GO:0004707) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 0.8 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.2 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.8 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |
0.0 | 0.3 | REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE | Genes involved in mRNA Decay by 3' to 5' Exoribonuclease |
0.0 | 0.9 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.2 | REACTOME RAF MAP KINASE CASCADE | Genes involved in RAF/MAP kinase cascade |
0.0 | 0.4 | REACTOME CYTOSOLIC TRNA AMINOACYLATION | Genes involved in Cytosolic tRNA aminoacylation |
0.0 | 0.3 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |