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2D miR_HR1_12

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Results for Foxd3

Z-value: 0.64

Motif logo

Transcription factors associated with Foxd3

Gene Symbol Gene ID Gene Info
ENSMUSG00000067261.3 forkhead box D3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Foxd3mm10_v2_chr4_+_99656299_99656340-0.195.5e-01Click!

Activity profile of Foxd3 motif

Sorted Z-values of Foxd3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_103904887 2.14 ENSMUST00000074051.5
serine (or cysteine) peptidase inhibitor, clade A, member 1C
chr12_-_103773592 2.07 ENSMUST00000078869.5
serine (or cysteine) peptidase inhibitor, clade A, member 1D
chr12_-_103956891 1.65 ENSMUST00000085054.4
serine (or cysteine) peptidase inhibitor, clade A, member 1E
chr12_-_103738158 1.57 ENSMUST00000095450.4
serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr1_+_88406956 1.03 ENSMUST00000027518.5
secreted phosphoprotein 2
chr1_+_53061637 1.00 ENSMUST00000027269.5
myostatin
chr17_+_29090969 0.89 ENSMUST00000119901.1
cyclin-dependent kinase inhibitor 1A (P21)
chr9_+_36832684 0.58 ENSMUST00000034630.8
fasciculation and elongation protein zeta 1 (zygin I)
chr4_+_108847827 0.56 ENSMUST00000102738.2
KTI12 homolog, chromatin associated (S. cerevisiae)
chr1_+_6734827 0.56 ENSMUST00000139838.1
suppression of tumorigenicity 18
chr10_-_127030813 0.53 ENSMUST00000040560.4
Ts translation elongation factor, mitochondrial
chr10_+_57645834 0.51 ENSMUST00000177325.1
protein kinase inhibitor beta, cAMP dependent, testis specific
chr2_+_181767040 0.51 ENSMUST00000108756.1
myelin transcription factor 1
chr5_-_107687990 0.50 ENSMUST00000180428.1
predicted gene, 26692
chr2_+_181767283 0.49 ENSMUST00000108757.2
myelin transcription factor 1
chr10_+_57645861 0.49 ENSMUST00000177473.1
protein kinase inhibitor beta, cAMP dependent, testis specific
chr10_-_127030789 0.46 ENSMUST00000120547.1
ENSMUST00000152054.1
Ts translation elongation factor, mitochondrial
chr2_-_17460610 0.44 ENSMUST00000145492.1
nebulette
chr14_+_101840501 0.44 ENSMUST00000159026.1
LIM domain only 7
chr15_-_98607611 0.41 ENSMUST00000096224.4
adenylate cyclase 6
chr3_+_76075583 0.39 ENSMUST00000160261.1
follistatin-like 5
chr9_-_119209096 0.36 ENSMUST00000084797.4
solute carrier family 22 (organic cation transporter), member 13
chr5_+_148265202 0.34 ENSMUST00000110515.2
microtubule associated tumor suppressor candidate 2
chr9_-_58118807 0.32 ENSMUST00000098681.3
ENSMUST00000098682.3
coiled-coil domain containing 33
chr2_-_120539852 0.30 ENSMUST00000171215.1
zinc finger protein 106
chr14_-_45388772 0.30 ENSMUST00000046191.7
glucosamine-phosphate N-acetyltransferase 1
chr5_+_148265307 0.28 ENSMUST00000110514.1
microtubule associated tumor suppressor candidate 2
chr10_+_67096456 0.27 ENSMUST00000174317.1
jumonji domain containing 1C
chr6_-_3494587 0.25 ENSMUST00000049985.8
HEPACAM family member 2
chr14_+_101840602 0.24 ENSMUST00000159314.1
LIM domain only 7
chr18_+_68337504 0.23 ENSMUST00000172148.1
melanocortin 5 receptor
chr5_+_148265265 0.22 ENSMUST00000071878.5
microtubule associated tumor suppressor candidate 2
chr7_+_67655414 0.21 ENSMUST00000107470.1
tetratricopeptide repeat domain 23
chr11_-_107189325 0.19 ENSMUST00000018577.7
ENSMUST00000106757.1
nucleolar protein 11
chrX_+_164373363 0.19 ENSMUST00000033751.7
c-fos induced growth factor
chr13_+_16014457 0.19 ENSMUST00000164993.1
inhibin beta-A
chr3_-_146596588 0.18 ENSMUST00000029836.4
deoxyribonuclease II beta
chr4_-_82850721 0.18 ENSMUST00000139401.1
zinc finger, DHHC domain containing 21
chr9_-_90270712 0.17 ENSMUST00000041767.7
ENSMUST00000144348.1
TBC1 domain family, member 2B
chr4_-_137785371 0.17 ENSMUST00000133473.1
alkaline phosphatase, liver/bone/kidney
chr6_-_142011414 0.17 ENSMUST00000181628.1
ENSMUST00000181791.1
predicted gene 6614
chr14_-_52213379 0.16 ENSMUST00000140603.1
chromodomain helicase DNA binding protein 8
chr5_-_120612558 0.15 ENSMUST00000140554.1
ENSMUST00000031599.2
ENSMUST00000177800.1
RIKEN cDNA 1110008J03 gene
chr6_-_144209471 0.15 ENSMUST00000038815.7
SRY-box containing gene 5
chr8_+_46739745 0.14 ENSMUST00000034041.7
interferon regulatory factor 2
chr9_+_96258697 0.13 ENSMUST00000179416.1
transcription factor Dp 2
chr15_-_99287174 0.13 ENSMUST00000109100.1
family with sequence similarity 186, member B
chrX_+_109196750 0.13 ENSMUST00000139259.1
ENSMUST00000060013.3
predicted gene 6377
chr3_+_89520152 0.13 ENSMUST00000000811.7
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr2_+_52038005 0.13 ENSMUST00000065927.5
tumor necrosis factor alpha induced protein 6
chr10_-_11080956 0.12 ENSMUST00000105560.1
glutamate receptor, metabotropic 1
chr7_-_102494773 0.12 ENSMUST00000058750.3
olfactory receptor 545
chr13_+_41655697 0.12 ENSMUST00000067176.8
predicted gene 5082
chr16_-_16527364 0.10 ENSMUST00000069284.7
FYVE, RhoGEF and PH domain containing 4
chr5_+_32247351 0.09 ENSMUST00000101376.2
phospholipase B1
chr5_-_31295862 0.09 ENSMUST00000041266.7
ENSMUST00000172435.1
fibronectin type III domain containing 4
chr10_+_93488766 0.09 ENSMUST00000129421.1
histidine ammonia lyase
chr17_+_28691419 0.09 ENSMUST00000124886.1
mitogen-activated protein kinase 14
chr11_+_98798653 0.08 ENSMUST00000037930.6
male-specific lethal 1 homolog (Drosophila)
chr1_-_126830786 0.08 ENSMUST00000162646.1
NCK-associated protein 5
chr6_-_144209558 0.08 ENSMUST00000111749.1
ENSMUST00000170367.2
SRY-box containing gene 5
chr2_-_45110336 0.07 ENSMUST00000028229.6
ENSMUST00000152232.1
zinc finger E-box binding homeobox 2
chr12_-_101958148 0.07 ENSMUST00000159883.1
ENSMUST00000160251.1
ENSMUST00000161011.1
ENSMUST00000021606.5
ataxin 3
chr11_-_99993992 0.07 ENSMUST00000105049.1
keratin associated protein 17-1
chr9_-_89092835 0.07 ENSMUST00000167113.1
tripartite motif-containing 43B
chr11_+_96316684 0.06 ENSMUST00000049241.7
homeobox B4
chr11_+_78920787 0.06 ENSMUST00000018610.6
nitric oxide synthase 2, inducible
chr2_+_131950855 0.05 ENSMUST00000110170.1
ENSMUST00000110172.2
ENSMUST00000110171.2
prion protein dublet
chrX_-_101269023 0.05 ENSMUST00000117736.1
predicted gene 20489
chr2_+_131951011 0.04 ENSMUST00000110169.1
prion protein dublet
chr10_-_88605017 0.04 ENSMUST00000119185.1
ENSMUST00000121629.1
myosin binding protein C, slow-type
chr10_+_99443699 0.03 ENSMUST00000167243.1
glutamate decarboxylase 1, pseudogene
chr13_-_19824234 0.03 ENSMUST00000065335.2
G protein-coupled receptor 141
chr11_-_75439489 0.03 ENSMUST00000043696.2
serine (or cysteine) peptidase inhibitor, clade F, member 2
chr2_+_14388316 0.02 ENSMUST00000114731.1
ENSMUST00000082290.7
solute carrier family 39 (zinc transporter), member 12
chr6_+_90122643 0.02 ENSMUST00000174204.1
vomeronasal 1 receptor 51
chr16_-_4880284 0.01 ENSMUST00000037843.6
UBA-like domain containing 1
chr5_-_88675190 0.01 ENSMUST00000133532.1
ENSMUST00000150438.1
G-rich RNA sequence binding factor 1
chr19_-_8713862 0.01 ENSMUST00000010239.4
solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr18_-_6516089 0.00 ENSMUST00000115870.2
enhancer of polycomb homolog 1 (Drosophila)

Network of associatons between targets according to the STRING database.

First level regulatory network of Foxd3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0014732 skeletal muscle atrophy(GO:0014732)
0.2 1.0 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.1 0.9 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 0.3 GO:0006048 glucosamine metabolic process(GO:0006041) UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 1.0 GO:2000480 negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.1 1.0 GO:0060539 diaphragm development(GO:0060539)
0.1 0.4 GO:0035811 negative regulation of urine volume(GO:0035811)
0.0 0.6 GO:2001269 positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:2001269)
0.0 0.6 GO:1902902 negative regulation of autophagosome assembly(GO:1902902)
0.0 0.2 GO:0060279 regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279)
0.0 1.6 GO:0006953 acute-phase response(GO:0006953)
0.0 0.3 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.0 0.1 GO:0006548 histidine catabolic process(GO:0006548)
0.0 0.3 GO:0015747 urate transport(GO:0015747)
0.0 0.2 GO:0060164 regulation of timing of neuron differentiation(GO:0060164)
0.0 0.2 GO:1901838 positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901838)
0.0 0.2 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 3.7 GO:0010466 negative regulation of peptidase activity(GO:0010466)
0.0 0.2 GO:2000270 negative regulation of fibroblast apoptotic process(GO:2000270)
0.0 0.1 GO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.0 0.1 GO:0021767 mammillary body development(GO:0021767) mammillary axonal complex development(GO:0061373) positive regulation of lens fiber cell differentiation(GO:1902748)
0.0 0.1 GO:0030035 microspike assembly(GO:0030035)
0.0 0.2 GO:0006309 apoptotic DNA fragmentation(GO:0006309)
0.0 0.1 GO:0031284 positive regulation of guanylate cyclase activity(GO:0031284)
0.0 0.1 GO:2000344 positive regulation of acrosome reaction(GO:2000344)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0070557 PCNA-p21 complex(GO:0070557)
0.1 0.2 GO:0043512 inhibin A complex(GO:0043512)
0.0 0.4 GO:0031528 microvillus membrane(GO:0031528)
0.0 0.1 GO:0072487 MSL complex(GO:0072487)
0.0 0.8 GO:0045171 intercellular bridge(GO:0045171)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0019912 cyclin-dependent protein kinase activating kinase activity(GO:0019912)
0.1 7.3 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.4 GO:0008294 calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294)
0.1 0.1 GO:0008603 cAMP-dependent protein kinase regulator activity(GO:0008603)
0.1 0.2 GO:0004977 melanocortin receptor activity(GO:0004977)
0.0 1.0 GO:0004862 cAMP-dependent protein kinase inhibitor activity(GO:0004862)
0.0 0.2 GO:0004531 deoxyribonuclease II activity(GO:0004531)
0.0 0.3 GO:0001515 opioid peptide activity(GO:0001515)
0.0 1.0 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0016286 small conductance calcium-activated potassium channel activity(GO:0016286)
0.0 0.1 GO:0001639 PLC activating G-protein coupled glutamate receptor activity(GO:0001639) G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential(GO:0099530)
0.0 0.1 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.0 0.2 GO:0004035 alkaline phosphatase activity(GO:0004035)
0.0 0.2 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.4 GO:0015347 sodium-independent organic anion transmembrane transporter activity(GO:0015347)
0.0 0.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.0 0.6 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.3 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.7 GO:0042805 actinin binding(GO:0042805)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.4 PID LPA4 PATHWAY LPA4-mediated signaling events
0.0 0.2 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL Genes involved in AKT phosphorylates targets in the cytosol
0.0 0.4 REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY Genes involved in Adenylate cyclase activating pathway
0.0 0.2 REACTOME GLYCOPROTEIN HORMONES Genes involved in Glycoprotein hormones
0.0 0.3 REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS Genes involved in Synthesis of substrates in N-glycan biosythesis
0.0 0.2 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions