Project

2D miR_HR1_12

Navigation
Downloads

Results for GGCAAGA

Z-value: 0.09

Motif logo

miRNA associated with seed GGCAAGA

NamemiRBASE accession
MIMAT0000538

Activity profile of GGCAAGA motif

Sorted Z-values of GGCAAGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr4_+_101419277 0.10 ENSMUST00000102780.1
ENSMUST00000106946.1
ENSMUST00000106945.1
adenylate kinase 4
chr10_-_69352886 0.10 ENSMUST00000119827.1
ENSMUST00000020099.5
cyclin-dependent kinase 1
chr5_+_30711564 0.06 ENSMUST00000114729.1
dihydropyrimidinase-like 5
chr9_+_83548309 0.04 ENSMUST00000113215.3
SH3 domain binding glutamic acid-rich protein like 2
chr15_+_82274935 0.04 ENSMUST00000023095.6
septin 3
chr4_+_136172367 0.04 ENSMUST00000061721.5
E2F transcription factor 2
chr18_-_14682756 0.03 ENSMUST00000040964.6
ENSMUST00000092041.3
ENSMUST00000040924.7
synovial sarcoma translocation, Chromosome 18
chr4_+_17853451 0.03 ENSMUST00000029881.3
matrix metallopeptidase 16
chr11_-_78165521 0.03 ENSMUST00000017530.3
TNF receptor associated factor 4
chr14_-_67072465 0.03 ENSMUST00000089230.5
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
chr3_+_145987835 0.03 ENSMUST00000039517.6
synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr8_-_70766654 0.03 ENSMUST00000034299.5
interferon gamma inducible protein 30
chrX_-_142966709 0.03 ENSMUST00000041317.2
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr17_+_47630690 0.03 ENSMUST00000024779.8
ubiquitin specific peptidase 49
chr5_+_76840597 0.02 ENSMUST00000120639.2
ENSMUST00000163347.1
ENSMUST00000121851.1
RIKEN cDNA C530008M17 gene
chr11_+_20543307 0.02 ENSMUST00000093292.4
SERTA domain containing 2
chr12_-_54203860 0.02 ENSMUST00000039516.3
EGL nine homolog 3 (C. elegans)
chr4_-_91372028 0.02 ENSMUST00000107110.1
ENSMUST00000008633.8
ENSMUST00000107118.1
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chr5_+_143464493 0.02 ENSMUST00000045593.8
diacylglycerol lipase, beta
chr1_-_165934900 0.02 ENSMUST00000069609.5
ENSMUST00000111427.2
ENSMUST00000111426.4
POU domain, class 2, transcription factor 1
chr12_+_84996309 0.02 ENSMUST00000168977.1
ENSMUST00000021670.8
YLP motif containing 1
chr2_-_53191214 0.02 ENSMUST00000076313.6
ENSMUST00000125243.1
PRP40 pre-mRNA processing factor 40 homolog A (yeast)
chr3_+_90341654 0.02 ENSMUST00000049382.4
GATA zinc finger domain containing 2B
chr4_-_133753611 0.02 ENSMUST00000145664.2
ENSMUST00000105897.3
AT rich interactive domain 1A (SWI-like)
chr2_+_27515157 0.02 ENSMUST00000113952.3
WD repeat domain 5
chr4_+_106561027 0.02 ENSMUST00000047973.3
24-dehydrocholesterol reductase
chr11_+_77686155 0.02 ENSMUST00000100802.4
ENSMUST00000181023.1
nuclear fragile X mental retardation protein interacting protein 2
chr9_+_106368594 0.02 ENSMUST00000172306.2
dual specificity phosphatase 7
chr15_-_98607611 0.02 ENSMUST00000096224.4
adenylate cyclase 6
chr13_+_54071815 0.02 ENSMUST00000021930.8
sideroflexin 1
chr16_+_44139821 0.02 ENSMUST00000159514.1
ENSMUST00000161326.1
ENSMUST00000063520.8
ENSMUST00000063542.7
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr6_-_18030435 0.02 ENSMUST00000010941.2
wingless-related MMTV integration site 2
chr10_-_61452658 0.02 ENSMUST00000167087.1
ENSMUST00000020288.7
eukaryotic translation initiation factor 4E binding protein 2
chr3_-_107696462 0.02 ENSMUST00000029490.8
S-adenosylhomocysteine hydrolase-like 1
chr15_-_43869993 0.02 ENSMUST00000067469.4
transmembrane protein 74
chr7_+_130577334 0.02 ENSMUST00000059145.7
ENSMUST00000084513.4
transforming, acidic coiled-coil containing protein 2
chr3_+_51415986 0.02 ENSMUST00000029303.7
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr2_-_69206133 0.01 ENSMUST00000112320.1
SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr9_-_21510181 0.01 ENSMUST00000034698.7
transmembrane emp24 domain containing 1
chr7_-_98178254 0.01 ENSMUST00000040971.7
calpain 5
chr14_+_31251454 0.01 ENSMUST00000022458.4
Brca1 associated protein 1
chr12_+_117516479 0.01 ENSMUST00000109691.2
Rap guanine nucleotide exchange factor (GEF) 5
chr16_+_16896469 0.01 ENSMUST00000027373.9
protein phosphatase 1F (PP2C domain containing)
chr11_-_22982090 0.01 ENSMUST00000160826.1
ENSMUST00000093270.5
ENSMUST00000071068.8
ENSMUST00000159081.1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA
COMM domain containing 1
chr12_+_101975965 0.01 ENSMUST00000047357.8
cleavage and polyadenylation specific factor 2
chr2_-_125859139 0.01 ENSMUST00000110463.1
ENSMUST00000028635.5
COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
chr2_+_145167706 0.01 ENSMUST00000110007.1
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr4_+_129136948 0.01 ENSMUST00000102600.3
fibronectin type III domain containing 5
chr13_+_93308006 0.01 ENSMUST00000079086.6
homer homolog 1 (Drosophila)
chr6_-_124415037 0.01 ENSMUST00000035861.5
ENSMUST00000112532.1
ENSMUST00000080557.5
peroxisomal biogenesis factor 5
chrX_-_73824938 0.01 ENSMUST00000114438.2
ENSMUST00000002080.5
PDZ domain containing 4
chr7_-_63938862 0.01 ENSMUST00000063694.8
Kruppel-like factor 13
chr8_+_105605220 0.01 ENSMUST00000043531.8
family with sequence similarity 65, member A
chr6_+_29917005 0.01 ENSMUST00000115224.2
ENSMUST00000046028.6
striatin interacting protein 2
chr3_+_136670076 0.01 ENSMUST00000070198.7
protein phosphatase 3, catalytic subunit, alpha isoform
chr3_-_94786469 0.01 ENSMUST00000107273.1
cingulin
chr9_-_45984816 0.01 ENSMUST00000172450.1
platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr13_-_107022027 0.01 ENSMUST00000117539.1
ENSMUST00000122233.1
ENSMUST00000022204.9
ENSMUST00000159772.1
kinesin family member 2A
chr14_-_70351354 0.01 ENSMUST00000143153.1
ENSMUST00000127000.1
ENSMUST00000068044.7
ENSMUST00000022688.3
solute carrier family 39 (zinc transporter), member 14
chr13_-_46727932 0.01 ENSMUST00000021803.9
nucleoporin 153
chr3_+_89520152 0.01 ENSMUST00000000811.7
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr9_+_32116040 0.01 ENSMUST00000174641.1
Rho GTPase activating protein 32
chr10_+_128377086 0.01 ENSMUST00000014642.3
ankyrin repeat domain 52
chr2_+_153741274 0.01 ENSMUST00000028981.8
microtubule-associated protein, RP/EB family, member 1
chr6_-_59426279 0.01 ENSMUST00000051065.4
GPRIN family member 3
chr14_-_52197216 0.01 ENSMUST00000046709.7
suppressor of Ty 16
chr11_-_23497867 0.01 ENSMUST00000128559.1
ENSMUST00000147157.1
ENSMUST00000109539.1
AHA1, activator of heat shock protein ATPase 2
chr2_-_33431324 0.01 ENSMUST00000113158.1
zinc finger and BTB domain containing 34
chr16_-_16146771 0.01 ENSMUST00000040248.7
scaffolding protein involved i DNA repair
chr9_+_52047150 0.01 ENSMUST00000163153.1
radixin
chr3_+_34020075 0.01 ENSMUST00000001620.8
ENSMUST00000167354.1
fragile X mental retardation gene 1, autosomal homolog
chr13_-_99516537 0.01 ENSMUST00000064762.4
microtubule-associated protein 1B
chr9_-_52168111 0.01 ENSMUST00000165519.1
zinc finger CCCH type containing 12C
chr5_+_65537209 0.01 ENSMUST00000142407.1
ubiquitin-conjugating enzyme E2K
chr11_-_103638862 0.01 ENSMUST00000107014.1
ENSMUST00000021328.7
lysozyme-like 6
chr15_-_93275151 0.01 ENSMUST00000057896.4
ENSMUST00000049484.6
glucoside xylosyltransferase 1
chr15_+_44428073 0.01 ENSMUST00000060652.3
enhancer of yellow 2 homolog (Drosophila)
chr11_-_120991305 0.01 ENSMUST00000018274.3
casein kinase 1, delta
chr6_-_53068562 0.01 ENSMUST00000074541.5
JAZF zinc finger 1
chr2_+_124610573 0.01 ENSMUST00000103239.3
ENSMUST00000103240.2
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr6_-_13608011 0.01 ENSMUST00000031554.2
transmembrane protein 168
chr19_+_27322539 0.01 ENSMUST00000056708.3
potassium channel, subfamily V, member 2
chr12_-_98901478 0.01 ENSMUST00000065716.6
echinoderm microtubule associated protein like 5
chr6_+_8948608 0.01 ENSMUST00000160300.1
neurexophilin 1
chr14_-_69732510 0.01 ENSMUST00000036381.8
charged multivesicular body protein 7
chr17_+_86167777 0.01 ENSMUST00000097275.2
protein kinase C, epsilon
chr12_+_111039334 0.01 ENSMUST00000084968.7
REST corepressor 1
chr19_-_32388462 0.01 ENSMUST00000099514.3
sphingomyelin synthase 1
chr4_-_141723401 0.01 ENSMUST00000102484.4
ENSMUST00000177592.1
DNA-damage inducible protein 2
regulatory solute carrier protein, family 1, member 1
chr9_-_119322421 0.00 ENSMUST00000040853.4
oxidative-stress responsive 1
chr4_-_126429501 0.00 ENSMUST00000069097.6
argonaute RISC catalytic subunit 3
chr2_+_65845767 0.00 ENSMUST00000122912.1
cysteine-serine-rich nuclear protein 3
chr13_-_85288999 0.00 ENSMUST00000109552.2
RAS p21 protein activator 1
chr7_-_100583072 0.00 ENSMUST00000152876.1
ENSMUST00000150042.1
mitochondrial ribosomal protein L48
chr16_+_42907563 0.00 ENSMUST00000151244.1
ENSMUST00000114694.2
zinc finger and BTB domain containing 20
chr9_-_27030010 0.00 ENSMUST00000034470.9
vacuolar protein sorting 26 homolog B (yeast)
chr16_+_13671922 0.00 ENSMUST00000035426.5
RIKEN cDNA 3110001I22 gene
chr19_-_47171134 0.00 ENSMUST00000169692.1
predicted gene 6970
chrX_-_165327376 0.00 ENSMUST00000058787.8
glycine receptor, alpha 2 subunit
chr5_-_33652296 0.00 ENSMUST00000151081.1
ENSMUST00000101354.3
stem-loop binding protein
chr4_-_14826582 0.00 ENSMUST00000117268.1
OTU domain containing 6B
chr11_-_106193511 0.00 ENSMUST00000007444.7
ENSMUST00000152008.1
ENSMUST00000103072.3
ENSMUST00000106867.1
STE20-related kinase adaptor alpha
chr10_+_50895651 0.00 ENSMUST00000020071.3
single-minded homolog 1 (Drosophila)
chr2_+_102658640 0.00 ENSMUST00000080210.3
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr6_-_32588192 0.00 ENSMUST00000115096.2
plexin A4
chr2_-_60963192 0.00 ENSMUST00000028347.6
RNA binding motif, single stranded interacting protein 1
chr6_+_4903298 0.00 ENSMUST00000035813.2
protein phosphatase 1, regulatory (inhibitor) subunit 9A
chr6_-_3763618 0.00 ENSMUST00000171613.1
calcitonin receptor
chr17_-_46487641 0.00 ENSMUST00000047034.8
tau tubulin kinase 1
chr3_+_152210458 0.00 ENSMUST00000166984.1
ENSMUST00000106121.1
far upstream element (FUSE) binding protein 1
chr1_+_60746358 0.00 ENSMUST00000027165.2
CD28 antigen
chr3_-_9610074 0.00 ENSMUST00000041124.7
zinc finger protein 704
chr1_-_151428440 0.00 ENSMUST00000064771.5
SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr19_+_40831248 0.00 ENSMUST00000025983.6
ENSMUST00000120057.1
cyclin J
chr2_+_16356294 0.00 ENSMUST00000028081.6
plexin domain containing 2
chr17_+_26138661 0.00 ENSMUST00000074370.3
ENSMUST00000118904.2
ENSMUST00000163421.1
axin 1
chr15_+_25843264 0.00 ENSMUST00000022881.7
family with sequence similarity 134, member B
chr9_+_45138437 0.00 ENSMUST00000060125.5
sodium channel, type IV, beta
chr2_-_120353094 0.00 ENSMUST00000028752.7
ENSMUST00000102501.3
vacuolar protein sorting 39 (yeast)
chr17_-_79896028 0.00 ENSMUST00000068282.5
ENSMUST00000112437.1
atlastin GTPase 2
chr16_-_23225334 0.00 ENSMUST00000055369.4
cDNA sequence BC106179
chr12_-_69892989 0.00 ENSMUST00000110567.1
ENSMUST00000171211.1
mitogen-activated protein kinase kinase kinase kinase 5
chr4_-_129335324 0.00 ENSMUST00000102598.3
retinoblastoma binding protein 4
chr7_-_12775658 0.00 ENSMUST00000046245.5
zinc finger and SCAN domain containing 18
chrX_+_151344171 0.00 ENSMUST00000073364.5
family with sequence similarity 120, member C
chr15_+_68928414 0.00 ENSMUST00000022954.6
KH domain containing, RNA binding, signal transduction associated 3
chr2_-_179976646 0.00 ENSMUST00000041618.7
TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr10_-_89621253 0.00 ENSMUST00000020102.7
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
chr18_+_64887690 0.00 ENSMUST00000163516.1
neural precursor cell expressed, developmentally down-regulated gene 4-like
chr8_+_107150621 0.00 ENSMUST00000034400.3
cytochrome b5 type B
chr7_-_35754394 0.00 ENSMUST00000051377.8
dpy-19-like 3 (C. elegans)
chr8_-_105979413 0.00 ENSMUST00000034371.7
dipeptidase 3
chr8_-_4325096 0.00 ENSMUST00000098950.4
ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
chr14_-_79771305 0.00 ENSMUST00000039568.5
protocadherin 8
chr11_+_75531690 0.00 ENSMUST00000149727.1
ENSMUST00000042561.7
ENSMUST00000108433.1
ENSMUST00000143035.1
solute carrier family 43, member 2
chr9_+_111311674 0.00 ENSMUST00000078626.3
tetratricopeptide repeat and ankyrin repeat containing 1
chr7_+_97579868 0.00 ENSMUST00000042399.7
ENSMUST00000107153.1
remodeling and spacing factor 1

Network of associatons between targets according to the STRING database.

First level regulatory network of GGCAAGA

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0090166 Golgi disassembly(GO:0090166)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0099569 presynaptic cytoskeleton(GO:0099569)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.