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2D miR_HR1_12

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Results for Atoh1_Bhlhe23

Z-value: 0.46

Motif logo

Transcription factors associated with Atoh1_Bhlhe23

Gene Symbol Gene ID Gene Info
ENSMUSG00000073043.4 atonal bHLH transcription factor 1
ENSMUSG00000045493.3 basic helix-loop-helix family, member e23

Activity profile of Atoh1_Bhlhe23 motif

Sorted Z-values of Atoh1_Bhlhe23 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_30458280 0.94 ENSMUST00000126297.1
nephrosis 1, nephrin
chr1_+_6730135 0.78 ENSMUST00000155921.1
suppression of tumorigenicity 18
chr5_-_124187150 0.78 ENSMUST00000161938.1
phosphatidylinositol transfer protein, membrane-associated 2
chr3_-_123236134 0.52 ENSMUST00000106427.1
ENSMUST00000106426.1
ENSMUST00000051443.5
synaptopodin 2
chr4_+_11579647 0.52 ENSMUST00000180239.1
fibrinogen silencer binding protein
chr10_-_70655934 0.41 ENSMUST00000162144.1
ENSMUST00000162793.1
phytanoyl-CoA hydroxylase interacting protein-like
chr16_+_16213318 0.41 ENSMUST00000162150.1
ENSMUST00000161342.1
ENSMUST00000039408.2
plakophilin 2
chr1_+_15287259 0.40 ENSMUST00000175681.1
potassium voltage gated channel, Shab-related subfamily, member 2
chr11_-_75796048 0.38 ENSMUST00000021209.7
double C2, beta
chr1_+_6730051 0.33 ENSMUST00000043578.6
ENSMUST00000131467.1
ENSMUST00000150761.1
ENSMUST00000151281.1
suppression of tumorigenicity 18
chr19_-_53371766 0.33 ENSMUST00000086887.1
predicted gene 10197
chr9_+_66946057 0.32 ENSMUST00000040917.7
ENSMUST00000127896.1
ribosomal protein S27-like
chr19_+_7268296 0.31 ENSMUST00000066646.4
REST corepressor 2
chr2_+_69670100 0.29 ENSMUST00000100050.3
kelch-like 41
chr2_+_62046623 0.28 ENSMUST00000112480.2
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2_+_62046580 0.27 ENSMUST00000054484.8
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr15_+_78913916 0.25 ENSMUST00000089378.4
pyridoxal (pyridoxine, vitamin B6) phosphatase
chr5_+_124194894 0.25 ENSMUST00000159053.1
ENSMUST00000162577.1
predicted gene 16338
chr2_+_62046462 0.25 ENSMUST00000102735.3
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr3_-_126998408 0.24 ENSMUST00000182764.1
ENSMUST00000044443.8
ankyrin 2, brain
chr6_-_148831395 0.24 ENSMUST00000145960.1
importin 8
chr4_-_82850721 0.24 ENSMUST00000139401.1
zinc finger, DHHC domain containing 21
chr5_-_66618636 0.24 ENSMUST00000162382.1
ENSMUST00000160870.1
ENSMUST00000087256.5
ENSMUST00000160103.1
ENSMUST00000162349.1
amyloid beta (A4) precursor protein-binding, family B, member 2
chr6_-_113501818 0.23 ENSMUST00000101059.1
proline-rich transmembrane protein 3
chr1_-_74749221 0.23 ENSMUST00000081636.6
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit
chr15_-_91191733 0.22 ENSMUST00000069511.6
ATP-binding cassette, sub-family D (ALD), member 2
chr15_+_84669565 0.22 ENSMUST00000171460.1
proline rich 5 (renal)
chr7_-_126704522 0.22 ENSMUST00000135087.1
coronin, actin binding protein 1A
chr2_-_105399286 0.21 ENSMUST00000006128.6
reticulocalbin 1
chr2_-_80129458 0.20 ENSMUST00000102653.1
phosphodiesterase 1A, calmodulin-dependent
chrX_+_56786527 0.20 ENSMUST00000144600.1
four and a half LIM domains 1
chr7_-_126704736 0.20 ENSMUST00000131415.1
coronin, actin binding protein 1A
chr9_+_26999668 0.19 ENSMUST00000039161.8
thymocyte nuclear protein 1
chr18_+_34759551 0.19 ENSMUST00000097622.3
family with sequence similarity 53, member C
chr1_+_150392794 0.18 ENSMUST00000124973.2
translocated promoter region
chr11_+_58954675 0.17 ENSMUST00000108817.3
ENSMUST00000047697.5
histone cluster 3, H2a
tripartite motif-containing 17
chr8_+_25601591 0.17 ENSMUST00000155861.1
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
chr9_-_71896047 0.17 ENSMUST00000184448.1
transcription factor 12
chr8_+_4243264 0.15 ENSMUST00000110996.1
mitogen-activated protein kinase kinase 7
chr7_-_141437829 0.15 ENSMUST00000019226.7
solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr17_+_88626549 0.15 ENSMUST00000163588.1
ENSMUST00000064035.6
stonin 1
chr15_+_82256023 0.14 ENSMUST00000143238.1
RIKEN cDNA 1500009C09 gene
chr7_+_101394361 0.14 ENSMUST00000154239.1
ENSMUST00000098243.2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr2_-_54085542 0.13 ENSMUST00000100089.2
reprimo, TP53 dependent G2 arrest mediator candidate
chr1_-_178337774 0.13 ENSMUST00000037748.7
heterogeneous nuclear ribonucleoprotein U
chr9_+_106281061 0.13 ENSMUST00000072206.6
POC1 centriolar protein homolog A (Chlamydomonas)
chr7_-_141437587 0.13 ENSMUST00000172654.1
ENSMUST00000106006.1
solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr15_-_81408261 0.12 ENSMUST00000057236.3
DnaJ (Hsp40) homolog, subfamily B, member 7
chr2_-_79456750 0.12 ENSMUST00000041099.4
neurogenic differentiation 1
chr6_+_17743582 0.12 ENSMUST00000000674.6
ENSMUST00000077080.2
suppression of tumorigenicity 7
chr13_-_97747399 0.12 ENSMUST00000144993.1
RIKEN cDNA 5330416C01 gene
chr5_-_74068361 0.12 ENSMUST00000119154.1
ENSMUST00000068058.7
ubiquitin specific peptidase 46
chr11_-_35980473 0.12 ENSMUST00000018993.6
WW, C2 and coiled-coil domain containing 1
chrX_+_36328353 0.11 ENSMUST00000016383.3
LON peptidase N-terminal domain and ring finger 3
chr11_-_76577701 0.11 ENSMUST00000176179.1
active BCR-related gene
chr7_-_126704816 0.11 ENSMUST00000032949.7
coronin, actin binding protein 1A
chr5_-_66618752 0.10 ENSMUST00000162366.1
amyloid beta (A4) precursor protein-binding, family B, member 2
chr9_+_35669624 0.10 ENSMUST00000118254.1
prostate and testis expressed 2
chr16_-_44333135 0.10 ENSMUST00000047446.6
SID1 transmembrane family, member 1
chr10_+_69706326 0.10 ENSMUST00000182992.1
ankyrin 3, epithelial
chr7_+_28788955 0.10 ENSMUST00000059857.7
Ras and Rab interactor-like
chr6_-_3494587 0.10 ENSMUST00000049985.8
HEPACAM family member 2
chr6_+_83034173 0.09 ENSMUST00000000707.2
ENSMUST00000101257.3
lysyl oxidase-like 3
chr17_+_88626569 0.09 ENSMUST00000150023.1
stonin 1
chr17_-_35074485 0.09 ENSMUST00000007259.3
lymphocyte antigen 6 complex, locus G6D
chr14_+_28511344 0.08 ENSMUST00000112272.1
wingless-related MMTV integration site 5A
chr2_+_118772766 0.08 ENSMUST00000130293.1
ENSMUST00000061360.3
proline/histidine/glycine-rich 1
chr2_+_127587214 0.08 ENSMUST00000028852.6
mitochondrial ribosomal protein S5
chr4_+_55350043 0.08 ENSMUST00000030134.8
RAD23b homolog (S. cerevisiae)
chr2_-_80128834 0.08 ENSMUST00000102654.4
ENSMUST00000102655.3
phosphodiesterase 1A, calmodulin-dependent
chr1_-_150392719 0.07 ENSMUST00000006167.6
ENSMUST00000094477.2
ENSMUST00000097547.3
cDNA sequence BC003331
chr11_-_96747405 0.07 ENSMUST00000180492.1
RIKEN cDNA 2010300F17 gene
chr11_+_120232921 0.07 ENSMUST00000122148.1
ENSMUST00000044985.7
BAH domain and coiled-coil containing 1
chr2_-_71367749 0.07 ENSMUST00000151937.1
solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr4_+_127172866 0.07 ENSMUST00000106094.2
discs, large (Drosophila) homolog-associated protein 3
chr8_+_94838321 0.07 ENSMUST00000034234.8
ENSMUST00000159871.1
coenzyme Q9 homolog (yeast)
chr9_-_26999491 0.06 ENSMUST00000060513.7
ENSMUST00000120367.1
acyl-Coenzyme A dehydrogenase family, member 8
chr11_-_97782409 0.06 ENSMUST00000103146.4
ribosomal protein L23
chr16_+_57353093 0.06 ENSMUST00000159816.1
filamin A interacting protein 1-like
chr3_-_107333289 0.06 ENSMUST00000061772.9
RNA binding motif protein 15
chr5_+_3343893 0.06 ENSMUST00000165117.1
cyclin-dependent kinase 6
chr11_-_72550255 0.05 ENSMUST00000021154.6
spinster homolog 3
chr11_-_101417615 0.05 ENSMUST00000070395.8
alanyl-tRNA synthetase domain containing 1
chr1_-_183147461 0.04 ENSMUST00000171366.1
dispatched homolog 1 (Drosophila)
chr17_-_6449571 0.04 ENSMUST00000180035.1
transmembrane protein 181B, pseudogene
chr6_+_147032528 0.04 ENSMUST00000036194.4
RAB15 effector protein
chr11_-_97782377 0.04 ENSMUST00000128801.1
ribosomal protein L23
chr4_-_141598206 0.04 ENSMUST00000131317.1
ENSMUST00000006381.4
ENSMUST00000129602.1
filamin binding LIM protein 1
chr2_+_155382186 0.04 ENSMUST00000134218.1
transformation related protein 53 inducible nuclear protein 2
chr15_-_76918010 0.04 ENSMUST00000048854.7
zinc finger protein 647
chr1_+_129273344 0.04 ENSMUST00000073527.6
ENSMUST00000040311.7
thrombospondin, type I, domain containing 7B
chr16_-_44332925 0.04 ENSMUST00000136381.1
SID1 transmembrane family, member 1
chr16_+_43510267 0.04 ENSMUST00000114695.2
zinc finger and BTB domain containing 20
chr10_+_80142358 0.03 ENSMUST00000105366.1
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
chr10_+_80142295 0.03 ENSMUST00000003156.8
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
chr11_-_96747419 0.03 ENSMUST00000181758.1
RIKEN cDNA 2010300F17 gene
chr1_-_111864869 0.03 ENSMUST00000035462.5
dermatan sulfate epimerase-like
chr4_+_80910646 0.03 ENSMUST00000055922.3
leucine rich adaptor protein 1-like
chr13_+_108046411 0.03 ENSMUST00000095458.4
small integral membrane protein 15
chr8_-_106337987 0.03 ENSMUST00000067512.7
sphingomyelin phosphodiesterase 3, neutral
chr11_-_87404380 0.03 ENSMUST00000067692.6
RAD51 homolog C
chr7_+_18065929 0.02 ENSMUST00000032520.2
ENSMUST00000108487.2
ENSMUST00000108483.1
carcinoembryonic antigen-related cell adhesion molecule 12
chr10_+_59879617 0.02 ENSMUST00000142819.1
ENSMUST00000020309.6
DnaJ (Hsp40) homolog, subfamily B, member 12
chr5_+_123076275 0.02 ENSMUST00000067505.8
ENSMUST00000111619.3
ENSMUST00000160344.1
transmembrane protein 120B
chr6_-_128275577 0.02 ENSMUST00000130454.1
TEA domain family member 4
chr14_-_16249675 0.02 ENSMUST00000022311.4
3-oxoacyl-ACP synthase, mitochondrial
chr19_-_37207293 0.01 ENSMUST00000132580.1
ENSMUST00000079754.4
ENSMUST00000136286.1
ENSMUST00000126188.1
ENSMUST00000126781.1
cytoplasmic polyadenylation element binding protein 3
chr16_-_17722879 0.01 ENSMUST00000080936.6
ENSMUST00000012259.7
mediator complex subunit 15
chr7_+_127904079 0.01 ENSMUST00000071056.7
branched chain ketoacid dehydrogenase kinase
chr7_-_127137807 0.01 ENSMUST00000049931.5
sialophorin
chr1_+_42697146 0.01 ENSMUST00000054883.2
POU domain, class 3, transcription factor 3
chr11_+_31872100 0.01 ENSMUST00000020543.6
ENSMUST00000109412.2
cytoplasmic polyadenylation element binding protein 4
chr2_-_39065505 0.00 ENSMUST00000039165.8
golgi autoantigen, golgin subfamily a, 1

Network of associatons between targets according to the STRING database.

First level regulatory network of Atoh1_Bhlhe23

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0034334 adherens junction maintenance(GO:0034334)
0.1 1.1 GO:2001269 positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:2001269)
0.1 0.5 GO:0032796 uropod organization(GO:0032796)
0.1 0.5 GO:2000298 regulation of Rho-dependent protein serine/threonine kinase activity(GO:2000298)
0.1 0.3 GO:0042822 pyridoxal phosphate metabolic process(GO:0042822)
0.1 0.2 GO:0006404 RNA import into nucleus(GO:0006404) mRNA export from nucleus in response to heat stress(GO:0031990) negative regulation of nucleobase-containing compound transport(GO:0032240) negative regulation of RNA export from nucleus(GO:0046832)
0.0 0.1 GO:2000373 regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000371) positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000373)
0.0 0.8 GO:0021860 pyramidal neuron development(GO:0021860)
0.0 0.1 GO:2000328 regulation of T-helper 17 cell lineage commitment(GO:2000328)
0.0 0.1 GO:0061350 hypophysis morphogenesis(GO:0048850) cervix development(GO:0060067) lateral sprouting involved in mammary gland duct morphogenesis(GO:0060599) planar cell polarity pathway involved in outflow tract morphogenesis(GO:0061347) planar cell polarity pathway involved in ventricular septum morphogenesis(GO:0061348) planar cell polarity pathway involved in cardiac right atrium morphogenesis(GO:0061349) planar cell polarity pathway involved in cardiac muscle tissue morphogenesis(GO:0061350) planar cell polarity pathway involved in pericardium morphogenesis(GO:0061354) regulation of cell proliferation in midbrain(GO:1904933)
0.0 0.2 GO:0036309 protein localization to M-band(GO:0036309) protein localization to T-tubule(GO:0036371)
0.0 0.1 GO:0000715 nucleotide-excision repair, DNA damage recognition(GO:0000715)
0.0 0.2 GO:0042760 very long-chain fatty acid catabolic process(GO:0042760)
0.0 0.2 GO:0038203 TORC2 signaling(GO:0038203)
0.0 0.1 GO:0060729 intestinal epithelial structure maintenance(GO:0060729)
0.0 0.9 GO:0044062 regulation of excretion(GO:0044062)
0.0 0.1 GO:0043314 negative regulation of neutrophil degranulation(GO:0043314) negative regulation of blood vessel remodeling(GO:0060313)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.0 0.3 GO:0031272 regulation of pseudopodium assembly(GO:0031272)
0.0 0.1 GO:0072717 cellular response to actinomycin D(GO:0072717)
0.0 0.4 GO:0031340 positive regulation of vesicle fusion(GO:0031340)
0.0 0.1 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.3 GO:0046069 cGMP catabolic process(GO:0046069)
0.0 0.1 GO:0035331 negative regulation of hippo signaling(GO:0035331)
0.0 0.0 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.1 GO:0033227 dsRNA transport(GO:0033227)
0.0 0.2 GO:0070914 UV-damage excision repair(GO:0070914)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.1 GO:2000671 regulation of motor neuron apoptotic process(GO:2000671)
0.0 0.1 GO:0008343 adult feeding behavior(GO:0008343)
0.0 0.3 GO:0015813 L-glutamate transport(GO:0015813)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0097441 basilar dendrite(GO:0097441)
0.1 0.9 GO:0036056 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0 0.2 GO:0044615 nuclear pore nuclear basket(GO:0044615)
0.0 0.5 GO:0032426 stereocilium tip(GO:0032426)
0.0 0.1 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.1 GO:0071942 XPC complex(GO:0071942)
0.0 0.3 GO:0031143 pseudopodium(GO:0031143)
0.0 0.3 GO:0070938 contractile ring(GO:0070938)
0.0 0.2 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.4 GO:0030057 desmosome(GO:0030057)
0.0 0.2 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0033883 pyridoxal phosphatase activity(GO:0033883)
0.0 0.8 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.0 0.3 GO:0048101 calmodulin-dependent cyclic-nucleotide phosphodiesterase activity(GO:0004117) calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)
0.0 1.5 GO:0051393 alpha-actinin binding(GO:0051393)
0.0 0.3 GO:0008494 translation activator activity(GO:0008494)
0.0 0.5 GO:0032036 myosin heavy chain binding(GO:0032036)
0.0 0.1 GO:0008545 JUN kinase kinase activity(GO:0008545)
0.0 0.4 GO:0045294 alpha-catenin binding(GO:0045294)
0.0 0.1 GO:0051033 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.0 0.1 GO:1902379 chemoattractant activity involved in axon guidance(GO:1902379)
0.0 0.3 GO:0005314 high-affinity glutamate transmembrane transporter activity(GO:0005314)
0.0 0.4 GO:0005251 delayed rectifier potassium channel activity(GO:0005251)
0.0 0.1 GO:0098770 FBXO family protein binding(GO:0098770)
0.0 0.1 GO:0004720 protein-lysine 6-oxidase activity(GO:0004720)
0.0 0.1 GO:0015183 L-aspartate transmembrane transporter activity(GO:0015183)
0.0 0.0 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.1 GO:0034046 poly(G) binding(GO:0034046)
0.0 0.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.0 GO:0046624 sphingolipid transporter activity(GO:0046624)
0.0 0.1 GO:0030550 acetylcholine receptor inhibitor activity(GO:0030550)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 PID NEPHRIN NEPH1 PATHWAY Nephrin/Neph1 signaling in the kidney podocyte

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 REACTOME NEPHRIN INTERACTIONS Genes involved in Nephrin interactions
0.0 0.2 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK