mm10_v2_chrX_-_61185558_61185558	3.86725	Aire	ENSMUST00000166381.1|Cdr1|ENSMUSG00000090546.1|cerebellar degeneration related antigen 1
mm10_v2_chr14_-_47418407_47418407	0.626817	Aire	ENSMUST00000043296.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr7_+_29170345_29170414	0.317168	Aire	ENSMUST00000033886.7|Ggn|ENSMUSG00000031493.9|gametogenetin
mm10_v2_chr10_+_57650990_57651010	0.308144	Aire	ENSMUST00000175852.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr9_+_64235201_64235201	0.260505	Aire	ENSMUST00000039011.3|Uchl4|ENSMUSG00000035337.3|ubiquitin carboxyl-terminal esterase L4
mm10_v2_chr5_+_43672289_43672326	0.256015	Aire	ENSMUST00000156034.1|Cc2d2a|ENSMUSG00000039765.9|coiled-coil and C2 domain containing 2A
mm10_v2_chr4_+_11758147_11758220	0.230976	Aire	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr11_+_120608469_120608487	0.223083	Aire	ENSMUST00000106194.1|Npb|ENSMUSG00000044034.5|neuropeptide B 	ENSMUST00000106195.2|Npb|ENSMUSG00000044034.5|neuropeptide B
mm10_v2_chr19_-_4191035_4191069	0.20134	Aire	ENSMUST00000045864.2|Tbc1d10c|ENSMUSG00000040247.5|TBC1 domain family, member 10c
mm10_v2_chr18_+_37400845_37400886	0.192198	Aire	ENSMUST00000057228.1|Pcdhb9|ENSMUSG00000051242.1|protocadherin beta 9
mm10_v2_chr12_-_36156781_36156825	0.175342	Aire	ENSMUST00000020856.4|Bzw2|ENSMUSG00000020547.4|basic leucine zipper and W2 domains 2
mm10_v2_chr2_+_176431829_176431829	0.17001	Aire	ENSMUST00000172025.1|Gm14435|ENSMUSG00000089951.2|predicted gene 14435
mm10_v2_chr2_+_175283298_175283298	0.167891	Aire	ENSMUST00000098998.3|Gm14440|ENSMUSG00000078901.2|predicted gene 14440
mm10_v2_chr8_+_69808672_69808742	0.161565	Aire	ENSMUST00000036074.8|Gmip|ENSMUSG00000036246.8|Gem-interacting protein 	ENSMUST00000123453.1|Gmip|ENSMUSG00000036246.8|Gem-interacting protein
mm10_v2_chr11_+_120608492_120608505	0.161483	Aire	ENSMUST00000061309.4|Npb|ENSMUSG00000044034.5|neuropeptide B
mm10_v2_chr6_+_134396316_134396319	0.155151	Aire	ENSMUST00000032321.4|Bcl2l14|ENSMUSG00000030200.7|BCL2-like 14 (apoptosis facilitator)
mm10_v2_chr14_+_21481428_21481439	0.142774	Aire	ENSMUST00000182996.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr8_-_4216912_4217003	0.140326	Aire	ENSMUST00000177491.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr13_+_49504774_49504816	0.139629	Aire	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr17_-_29519790_29519790	0.139392	Aire	ENSMUST00000168877.1|Gm17657|ENSMUSG00000091614.1|predicted gene, 17657
mm10_v2_chr17_-_53463315_53463340	0.134016	Aire	ENSMUST00000024725.4|Efhb|ENSMUSG00000023931.4|EF hand domain family, member B
mm10_v2_chr3_-_88410295_88410351	0.130243	Aire	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr17_-_42692244_42692289	0.12988	Aire	ENSMUST00000170723.1|Gpr115|ENSMUSG00000023918.6|G protein-coupled receptor 115 	ENSMUST00000164524.1|Gpr115|ENSMUSG00000023918.6|G protein-coupled receptor 115 	ENSMUST00000024711.4|Gpr115|ENSMUSG00000023918.6|G protein-coupled receptor 115 	ENSMUST00000167993.1|Gpr115|ENSMUSG00000023918.6|G protein-coupled receptor 115
mm10_v2_chr13_+_55445301_55445374	0.121076	Aire	ENSMUST00000001115.8|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6 	ENSMUST00000099482.3|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6
mm10_v2_chr11_-_58502554_58502572	0.119145	Aire	ENSMUST00000170501.2|Olfr331|ENSMUSG00000058807.4|olfactory receptor 331 	ENSMUST00000081743.2|Olfr331|ENSMUSG00000058807.4|olfactory receptor 331
mm10_v2_chr4_-_46566432_46566471	0.111696	Aire	ENSMUST00000030021.7|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A 	ENSMUST00000107757.1|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A
mm10_v2_chr3_-_33082004_33082068	0.104393	Aire	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr5_-_135251209_135251242	0.103783	Aire	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr10_-_81014902_81014945	0.0994396	Aire	ENSMUST00000126317.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7 	ENSMUST00000092285.3|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7 	ENSMUST00000117805.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7
mm10_v2_chr2_-_112259281_112259312	0.0983317	Aire	ENSMUST00000043970.1|Nutm1|ENSMUSG00000041358.1|NUT midline carcinoma, family member 1
mm10_v2_chr19_+_11895999_11895999	0.093701	Aire	ENSMUST00000072784.2|Olfr1420|ENSMUSG00000060878.2|olfactory receptor 1420
mm10_v2_chrM_+_7759_7927	0.0889088	Aire	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr17_-_35516780_35516835	0.0865835	Aire	ENSMUST00000160885.1|Tcf19|ENSMUSG00000050410.9|transcription factor 19 	ENSMUST00000159009.1|Tcf19|ENSMUSG00000050410.9|transcription factor 19 	ENSMUST00000161012.1|Tcf19|ENSMUSG00000050410.9|transcription factor 19
mm10_v2_chr14_-_18894255_18894282	0.0810198	Aire	ENSMUST00000124353.1|Ube2e2|ENSMUSG00000058317.5|ubiquitin-conjugating enzyme E2E 2
mm10_v2_chr10_+_123264076_123264125	0.0728211	Aire	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr2_-_94010729_94010764	0.072663	Aire	ENSMUST00000040005.6|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli) 	ENSMUST00000126378.1|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli)
mm10_v2_chrX_-_38576166_38576187	0.0714928	Aire	ENSMUST00000050083.5|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr5_+_7960445_7960472	0.0711064	Aire	ENSMUST00000115421.1|Steap4|ENSMUSG00000012428.8|STEAP family member 4
mm10_v2_chrM_+_11734_11757	0.0705236	Aire	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr7_+_28863831_28863853	0.0691035	Aire	ENSMUST00000138272.1|Lgals7|ENSMUSG00000053522.5|lectin, galactose binding, soluble 7
mm10_v2_chr19_+_3323301_3323339	0.0686139	Aire	ENSMUST00000025835.4|Cpt1a|ENSMUSG00000024900.4|carnitine palmitoyltransferase 1a, liver
mm10_v2_chr11_+_105975204_105975215	0.0682078	Aire	ENSMUST00000001964.7|Ace|ENSMUSG00000020681.8|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm10_v2_chr1_-_128359610_128359698	0.0648553	Aire	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr4_+_154869585_154869636	0.0646002	Aire	ENSMUST00000079269.7|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000163732.1|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000080559.6|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1
mm10_v2_chr1_-_85270143_85270178	0.0606294	Aire	ENSMUST00000159582.1|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene 	ENSMUST00000161267.1|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene
mm10_v2_chr1_+_44119952_44119985	0.0588122	Aire	ENSMUST00000114709.2|Bivm|ENSMUSG00000041684.5|basic, immunoglobulin-like variable motif containing
mm10_v2_chrM_+_14138_14154	0.0570473	Aire	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr4_-_19570073_19570117	0.0552674	Aire	ENSMUST00000029885.4|Cpne3|ENSMUSG00000028228.5|copine III
mm10_v2_chr2_-_94010807_94010823	0.0543321	Aire	ENSMUST00000111240.1|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli)
mm10_v2_chrX_-_38576189_38576204	0.0528541	Aire	ENSMUST00000115118.1|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr17_-_6961156_6961156	0.0528184	Aire	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr9_+_76014855_76015055	0.0506634	Aire	ENSMUST00000008052.6|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183425.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183979.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000117981.2|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm10_v2_chrX_-_92016183_92016333	0.0505339	Aire	ENSMUST00000099471.2|Mageb1|ENSMUSG00000062162.2|melanoma antigen, family B, 1 	ENSMUST00000072269.1|Mageb1|ENSMUSG00000062162.2|melanoma antigen, family B, 1
mm10_v2_chrM_-_14060_14074	0.0487682	Aire	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr3_+_89459118_89459214	0.0480539	Aire	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr19_-_5663701_5663710	0.0475106	Aire	ENSMUST00000071857.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000080824.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000164304.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000169854.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1
mm10_v2_chr11_-_101417615_101417615	0.0474335	Aire	ENSMUST00000070395.8|Aarsd1|ENSMUSG00000075528.7|alanyl-tRNA synthetase domain containing 1
mm10_v2_chr5_-_113310697_113310727	0.0462956	Aire	ENSMUST00000154248.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr13_-_62371936_62371936	0.043873	Aire	ENSMUST00000107989.3|Gm3604|ENSMUSG00000094942.1|predicted gene 3604
mm10_v2_chr11_-_115627948_115628122	0.0437734	Aire	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr19_-_6118491_6118586	0.0430677	Aire	ENSMUST00000113533.1|Sac3d1|ENSMUSG00000024790.7|SAC3 domain containing 1
mm10_v2_chr10_+_3872667_3872788	0.0430164	Aire	ENSMUST00000136671.1|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1 	ENSMUST00000042438.6|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm10_v2_chrX_+_48256854_48256865	0.0424824	Aire	ENSMUST00000080713.4|Utp14a|ENSMUSG00000063785.6|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
mm10_v2_chr8_+_88289028_88289076	0.0424278	Aire	ENSMUST00000171456.1|Adcy7|ENSMUSG00000031659.6|adenylate cyclase 7
mm10_v2_chr5_-_50058908_50059010	0.042397	Aire	ENSMUST00000030971.5|Gpr125|ENSMUSG00000029090.8|G protein-coupled receptor 125
mm10_v2_chr17_-_17883920_17883954	0.0411356	Aire	ENSMUST00000061516.7|Fpr1|ENSMUSG00000045551.7|formyl peptide receptor 1
mm10_v2_chr8_-_4217261_4217312	0.0406915	Aire	ENSMUST00000168386.2|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr19_+_34217588_34217624	0.0405113	Aire	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr12_+_36157124_36157238	0.0393904	Aire	ENSMUST00000041640.3|Ankmy2|ENSMUSG00000036188.3|ankyrin repeat and MYND domain containing 2
mm10_v2_chr9_-_106096776_106096791	0.0393338	Aire	ENSMUST00000121963.1|Col6a4|ENSMUSG00000032572.6|collagen, type VI, alpha 4
mm10_v2_chr3_+_88835231_88835231	0.0385054	Aire	ENSMUST00000107498.2|Gon4l|ENSMUSG00000054199.10|gon-4-like (C.elegans)
mm10_v2_chrM_+_7005_7022	0.0345777	Aire	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr12_+_87200524_87200544	0.0343127	Aire	ENSMUST00000182869.1|Samd15|ENSMUSG00000090812.2|sterile alpha motif domain containing 15
mm10_v2_chr10_-_111997204_111997279	0.032683	Aire	ENSMUST00000074805.5|Glipr1|ENSMUSG00000056888.5|GLI pathogenesis-related 1 (glioma)
mm10_v2_chr11_+_3963970_3963983	0.032618	Aire	ENSMUST00000020705.4|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish) 	ENSMUST00000109985.1|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm10_v2_chr6_+_126939957_126939988	0.032133	Aire	ENSMUST00000032497.3|D6Wsu163e|ENSMUSG00000030347.3|DNA segment, Chr 6, Wayne State University 163, expressed
mm10_v2_chr14_+_51114455_51114565	0.0316273	Aire	ENSMUST00000100645.3|Eddm3b|ENSMUSG00000072575.3|epididymal protein 3B
mm10_v2_chr1_-_66863265_66863285	0.0315138	Aire	ENSMUST00000027153.5|Acadl|ENSMUSG00000026003.5|acyl-Coenzyme A dehydrogenase, long-chain
mm10_v2_chr5_+_140735526_140735567	0.0312135	Aire	ENSMUST00000120630.2|Amz1|ENSMUSG00000050022.10|archaelysin family metallopeptidase 1
mm10_v2_chr5_-_84417359_84417389	0.0307398	Aire	ENSMUST00000113401.1|Epha5|ENSMUSG00000029245.10|Eph receptor A5
mm10_v2_chr8_-_109962127_109962213	0.0290726	Aire	ENSMUST00000001722.7|Marveld3|ENSMUSG00000001672.8|MARVEL (membrane-associating) domain containing 3 	ENSMUST00000051430.6|Marveld3|ENSMUSG00000001672.8|MARVEL (membrane-associating) domain containing 3
mm10_v2_chr17_+_35236556_35236607	0.0277946	Aire	ENSMUST00000068261.8|Atp6v1g2|ENSMUSG00000024403.10|ATPase, H+ transporting, lysosomal V1 subunit G2
mm10_v2_chr2_-_134644019_134644042	0.0261083	Aire	ENSMUST00000110120.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr10_+_57650977_57650985	0.0239447	Aire	ENSMUST00000066028.6|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr3_-_62506970_62507027	0.0236882	Aire	ENSMUST00000029336.4|Dhx36|ENSMUSG00000027770.4|DEAH (Asp-Glu-Ala-His) box polypeptide 36
mm10_v2_chr2_+_25218741_25218750	0.0236277	Aire	ENSMUST00000028346.3|Fam166a|ENSMUSG00000026969.3|family with sequence similarity 166, member A
mm10_v2_chr4_+_63558748_63558859	0.0234473	Aire	ENSMUST00000077709.4|6330416G13Rik|ENSMUSG00000045917.11|RIKEN cDNA 6330416G13 gene
mm10_v2_chr16_+_23058250_23058393	0.0232604	Aire	ENSMUST00000039492.6|Kng1|ENSMUSG00000022875.11|kininogen 1 	ENSMUST00000023589.8|Kng1|ENSMUSG00000022875.11|kininogen 1 	ENSMUST00000089902.6|Kng1|ENSMUSG00000022875.11|kininogen 1
mm10_v2_chr7_-_126922887_126922926	0.0225791	Aire	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr2_+_55435918_55435970	0.0222265	Aire	ENSMUST00000067101.3|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr3_-_95217877_95217918	0.0218823	Aire	ENSMUST00000136139.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr5_+_137981512_137981556	0.0210706	Aire	ENSMUST00000035390.5|Azgp1|ENSMUSG00000037053.5|alpha-2-glycoprotein 1, zinc
mm10_v2_chrX_+_101429555_101429708	0.0208678	Aire	ENSMUST00000033673.6|Nono|ENSMUSG00000031311.11|non-POU-domain-containing, octamer binding protein
mm10_v2_chr7_+_45897429_45897534	0.0198562	Aire	ENSMUST00000140243.1|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143
mm10_v2_chr9_-_108263706_108263819	0.0195956	Aire	ENSMUST00000171412.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr9_-_53610329_53610382	0.0193733	Aire	ENSMUST00000034547.5|Acat1|ENSMUSG00000032047.5|acetyl-Coenzyme A acetyltransferase 1
mm10_v2_chr11_+_72961163_72961179	0.0192647	Aire	ENSMUST00000108486.1|Atp2a3|ENSMUSG00000020788.9|ATPase, Ca++ transporting, ubiquitous 	ENSMUST00000108484.1|Atp2a3|ENSMUSG00000020788.9|ATPase, Ca++ transporting, ubiquitous 	ENSMUST00000021142.7|Atp2a3|ENSMUSG00000020788.9|ATPase, Ca++ transporting, ubiquitous 	ENSMUST00000108485.2|Atp2a3|ENSMUSG00000020788.9|ATPase, Ca++ transporting, ubiquitous 	ENSMUST00000163326.1|Atp2a3|ENSMUSG00000020788.9|ATPase, Ca++ transporting, ubiquitous
mm10_v2_chr7_-_141434532_141434605	0.0187469	Aire	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr17_-_59013264_59013372	0.0182383	Aire	ENSMUST00000174122.1|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12 	ENSMUST00000025065.5|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm10_v2_chr2_-_134644079_134644109	0.0180089	Aire	ENSMUST00000110119.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr11_+_69914179_69914193	0.0172801	Aire	ENSMUST00000057884.5|Gps2|ENSMUSG00000023170.8|G protein pathway suppressor 2
mm10_v2_chr3_+_57425314_57425452	0.0171419	Aire	ENSMUST00000029377.7|Tm4sf4|ENSMUSG00000027801.7|transmembrane 4 superfamily member 4
mm10_v2_chr11_-_28584260_28584324	0.0170393	Aire	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr6_+_56956466_56956466	0.0163202	Aire	ENSMUST00000096612.3|Vmn1r4|ENSMUSG00000071893.4|vomeronasal 1 receptor 4
mm10_v2_chr15_-_98165613_98165625	0.0163114	Aire	ENSMUST00000143400.1|Asb8|ENSMUSG00000048175.7|ankyrin repeat and SOCS box-containing 8
mm10_v2_chr3_+_94443315_94443345	0.0159029	Aire	ENSMUST00000029786.7|Mrpl9|ENSMUSG00000028140.7|mitochondrial ribosomal protein L9 	ENSMUST00000098876.3|Mrpl9|ENSMUSG00000028140.7|mitochondrial ribosomal protein L9
mm10_v2_chr14_-_57571551_57571588	0.0158664	Aire	ENSMUST00000022518.5|N6amt2|ENSMUSG00000021951.5|N-6 adenine-specific DNA methyltransferase 2 (putative)
mm10_v2_chr5_-_105343929_105343929	0.0132067	Aire	ENSMUST00000183149.1|Gbp11|ENSMUSG00000098049.1|guanylate binding protein 11
mm10_v2_chrM_+_8600_8616	0.0129455	Aire	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr19_+_46707443_46707511	0.0120389	Aire	ENSMUST00000003655.7|As3mt|ENSMUSG00000003559.7|arsenic (+3 oxidation state) methyltransferase
mm10_v2_chr12_+_4843303_4843419	0.0115273	Aire	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr6_-_40999479_40999498	0.010975	Aire	ENSMUST00000166306.1|Gm2663|ENSMUSG00000096525.1|predicted gene 2663
mm10_v2_chr12_+_84052114_84052145	0.0104746	Aire	ENSMUST00000120927.1|Acot3|ENSMUSG00000021228.8|acyl-CoA thioesterase 3
mm10_v2_chr1_-_65186456_65186504	0.0103069	Aire	ENSMUST00000169032.1|Idh1|ENSMUSG00000025950.10|isocitrate dehydrogenase 1 (NADP+), soluble
mm10_v2_chr7_-_19665005_19665030	0.00974378	Aire	ENSMUST00000055242.9|Clptm1|ENSMUSG00000002981.9|cleft lip and palate associated transmembrane protein 1
mm10_v2_chr14_+_76476913_76476930	0.00971747	Aire	ENSMUST00000140251.2|Tsc22d1|ENSMUSG00000022010.13|TSC22 domain family, member 1
mm10_v2_chr15_+_10358525_10358545	0.00906242	Aire	ENSMUST00000110540.1|Agxt2|ENSMUSG00000089678.2|alanine-glyoxylate aminotransferase 2 	ENSMUST00000110541.1|Agxt2|ENSMUSG00000089678.2|alanine-glyoxylate aminotransferase 2 	ENSMUST00000110542.1|Agxt2|ENSMUSG00000089678.2|alanine-glyoxylate aminotransferase 2
mm10_v2_chr6_+_40964760_40964781	0.00786463	Aire	ENSMUST00000076638.5|1810009J06Rik|ENSMUSG00000094808.1|RIKEN cDNA 1810009J06 gene
mm10_v2_chr1_+_189728264_189728326	0.00372691	Aire	ENSMUST00000097442.2|Ptpn14|ENSMUSG00000026604.11|protein tyrosine phosphatase, non-receptor type 14
mm10_v2_chr6_-_148896150_148896237	0.0036746	Aire	ENSMUST00000072324.5|Caprin2|ENSMUSG00000030309.10|caprin family member 2 	ENSMUST00000111569.2|Caprin2|ENSMUSG00000030309.10|caprin family member 2
mm10_v2_chr13_-_110280103_110280213	0.00358811	Aire	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr11_+_67052641_67052708	0.00357215	Aire	ENSMUST00000108690.3|Sco1|ENSMUSG00000069844.6|SCO cytochrome oxidase deficient homolog 1 (yeast) 	ENSMUST00000092996.4|Sco1|ENSMUSG00000069844.6|SCO cytochrome oxidase deficient homolog 1 (yeast)
mm10_v2_chr9_-_53667429_53667521	0.0027525	Aire	ENSMUST00000166367.1|Cul5|ENSMUSG00000032030.10|cullin 5 	ENSMUST00000034529.7|Cul5|ENSMUSG00000032030.10|cullin 5
mm10_v2_chr3_+_89715016_89715084	0.00205064	Aire	ENSMUST00000098924.2|Adar|ENSMUSG00000027951.10|adenosine deaminase, RNA-specific
mm10_v2_chr7_-_84409959_84410002	0.00195405	Aire	ENSMUST00000085077.3|Arnt2|ENSMUSG00000015709.8|aryl hydrocarbon receptor nuclear translocator 2
mm10_v2_chr15_+_101266839_101266859	0.0017153	Aire	ENSMUST00000023779.6|Nr4a1|ENSMUSG00000023034.6|nuclear receptor subfamily 4, group A, member 1
mm10_v2_chr9_+_109816618_109816639	0.00170315	Aire	ENSMUST00000118732.1|Spink8|ENSMUSG00000050074.6|serine peptidase inhibitor, Kazal type 8
mm10_v2_chr2_-_121473993_121474067	0.00112831	Aire	ENSMUST00000056732.3|Mfap1b|ENSMUSG00000048222.3|microfibrillar-associated protein 1B
mm10_v2_chr7_-_115846080_115846112	0.00108532	Aire	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr15_-_98165560_98165598	0.000556028	Aire	ENSMUST00000123922.1|Asb8|ENSMUSG00000048175.7|ankyrin repeat and SOCS box-containing 8
