mm10_v2_chr17_-_48432723_48432741	0.940394	Emx1_Emx2	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr13_-_58354862_58354862	0.389479	Emx1_Emx2	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr5_-_89457763_89457898	0.38455	Emx1_Emx2	ENSMUST00000049209.8|Gc|ENSMUSG00000035540.8|group specific component
mm10_v2_chr1_-_158356258_158356313	0.305747	Emx1_Emx2	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr8_-_4779513_4779591	0.283347	Emx1_Emx2	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr10_-_118295038_118295038	0.273596	Emx1_Emx2	ENSMUST00000163808.1|Iltifb|ENSMUSG00000090461.2|interleukin 10-related T cell-derived inducible factor beta
mm10_v2_chr9_-_118014160_118014160	0.252525	Emx1_Emx2	ENSMUST00000111769.3|Zcwpw2|ENSMUSG00000032443.9|zinc finger, CW type with PWWP domain 2
mm10_v2_chr6_-_145047725_145047853	0.236816	Emx1_Emx2	ENSMUST00000123930.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr16_-_63864114_63864182	0.228642	Emx1_Emx2	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr9_+_65890237_65890343	0.210355	Emx1_Emx2	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr13_-_54399246_54399334	0.207789	Emx1_Emx2	ENSMUST00000124238.1|Gm16248|ENSMUSG00000086137.1|predicted gene 16248
mm10_v2_chr2_+_129100995_129101066	0.1985	Emx1_Emx2	ENSMUST00000103205.4|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B 	ENSMUST00000028874.7|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B
mm10_v2_chr10_-_39163794_39163794	0.183746	Emx1_Emx2	ENSMUST00000076713.4|Wisp3|ENSMUSG00000062074.6|WNT1 inducible signaling pathway protein 3
mm10_v2_chr6_-_145047636_145047661	0.177071	Emx1_Emx2	ENSMUST00000149769.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chrX_-_102157065_102157096	0.176308	Emx1_Emx2	ENSMUST00000056904.2|Ercc6l|ENSMUSG00000051220.2|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm10_v2_chr10_-_67912620_67912685	0.165523	Emx1_Emx2	ENSMUST00000064656.7|Zfp365|ENSMUSG00000037855.9|zinc finger protein 365
mm10_v2_chrX_+_159303266_159303281	0.163538	Emx1_Emx2	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr12_-_98577940_98578046	0.161276	Emx1_Emx2	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr6_-_50456085_50456174	0.157849	Emx1_Emx2	ENSMUST00000146341.1|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3 	ENSMUST00000071728.4|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr2_+_119047129_119047159	0.157081	Emx1_Emx2	ENSMUST00000153300.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000028799.5|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr13_+_16014457_16014475	0.15343	Emx1_Emx2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr2_-_119662756_119662835	0.144362	Emx1_Emx2	ENSMUST00000028768.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110801.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110802.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
mm10_v2_chr1_-_37496095_37496156	0.143206	Emx1_Emx2	ENSMUST00000148047.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A 	ENSMUST00000143636.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr19_+_23723279_23723279	0.141683	Emx1_Emx2	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr6_-_129533267_129533275	0.141372	Emx1_Emx2	ENSMUST00000181594.1|1700101I11Rik|ENSMUSG00000097675.1|RIKEN cDNA 1700101I11 gene
mm10_v2_chr7_+_45621805_45621825	0.140378	Emx1_Emx2	ENSMUST00000033100.4|Izumo1|ENSMUSG00000064158.4|izumo sperm-egg fusion 1
mm10_v2_chr2_-_17460610_17460635	0.138747	Emx1_Emx2	ENSMUST00000145492.1|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr6_+_79818031_79818031	0.131333	Emx1_Emx2	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chrX_-_160994665_160994702	0.1217	Emx1_Emx2	ENSMUST00000087104.4|Cdkl5|ENSMUSG00000031292.8|cyclin-dependent kinase-like 5
mm10_v2_chr8_+_85432686_85432686	0.12045	Emx1_Emx2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr6_-_115037824_115037881	0.118978	Emx1_Emx2	ENSMUST00000174848.1|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 	ENSMUST00000032461.5|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
mm10_v2_chr4_+_150236685_150236767	0.11781	Emx1_Emx2	ENSMUST00000150175.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr5_+_45493374_45493437	0.116343	Emx1_Emx2	ENSMUST00000046122.6|Lap3|ENSMUSG00000039682.6|leucine aminopeptidase 3
mm10_v2_chr5_-_65428354_65428374	0.115972	Emx1_Emx2	ENSMUST00000131263.1|Ugdh|ENSMUSG00000029201.8|UDP-glucose dehydrogenase
mm10_v2_chr14_-_18893376_18893420	0.115422	Emx1_Emx2	ENSMUST00000151926.1|Ube2e2|ENSMUSG00000058317.5|ubiquitin-conjugating enzyme E2E 2
mm10_v2_chr18_-_34579072_34579130	0.115401	Emx1_Emx2	ENSMUST00000079287.5|Nme5|ENSMUSG00000035984.8|NME/NM23 family member 5
mm10_v2_chr14_+_69347587_69347587	0.1152	Emx1_Emx2	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr4_+_146097312_146097345	0.110647	Emx1_Emx2	ENSMUST00000105730.1|Gm13051|ENSMUSG00000066009.8|predicted gene 13051 	ENSMUST00000091878.5|Gm13051|ENSMUSG00000066009.8|predicted gene 13051
mm10_v2_chr16_+_45224315_45224346	0.110438	Emx1_Emx2	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr4_+_19818722_19818743	0.10967	Emx1_Emx2	ENSMUST00000035890.7|Slc7a13|ENSMUSG00000041052.8|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13
mm10_v2_chr2_+_84988194_84988215	0.109317	Emx1_Emx2	ENSMUST00000028466.5|Prg3|ENSMUSG00000027072.7|proteoglycan 3
mm10_v2_chr4_-_147702553_147702553	0.106516	Emx1_Emx2	ENSMUST00000117638.1|Zfp534|ENSMUSG00000062518.7|zinc finger protein 534
mm10_v2_chr12_-_54999102_54999142	0.105348	Emx1_Emx2	ENSMUST00000173529.1|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A
mm10_v2_chr19_-_32196393_32196428	0.105033	Emx1_Emx2	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr3_-_63851251_63851359	0.104562	Emx1_Emx2	ENSMUST00000162269.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000159676.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000175947.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr2_+_93452796_93452833	0.10439	Emx1_Emx2	ENSMUST00000099693.2|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000162565.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000163052.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804
mm10_v2_chr13_-_120215213_120215213	0.103546	Emx1_Emx2	ENSMUST00000177561.1|Gm21762|ENSMUSG00000094027.1|predicted gene, 21762
mm10_v2_chr2_+_36230426_36230491	0.101324	Emx1_Emx2	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr7_-_30534180_30534180	0.10049	Emx1_Emx2	ENSMUST00000044338.4|Arhgap33|ENSMUSG00000036882.6|Rho GTPase activating protein 33
mm10_v2_chr10_+_20347788_20347859	0.099845	Emx1_Emx2	ENSMUST00000169712.1|Mtfr2|ENSMUSG00000019992.7|mitochondrial fission regulator 2
mm10_v2_chr5_-_65091584_65091616	0.0994124	Emx1_Emx2	ENSMUST00000043352.4|Tmem156|ENSMUSG00000037913.6|transmembrane protein 156
mm10_v2_chr10_+_90071095_90071117	0.096416	Emx1_Emx2	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr9_-_77399308_77399418	0.0934474	Emx1_Emx2	ENSMUST00000183878.1|RP23-264N13.2|ENSMUSG00000099170.1|RP23-264N13.2
mm10_v2_chrX_+_153139941_153140011	0.0925251	Emx1_Emx2	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr1_-_133610253_133610294	0.0912003	Emx1_Emx2	ENSMUST00000166915.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E
mm10_v2_chr18_+_52465676_52465710	0.0907631	Emx1_Emx2	ENSMUST00000025406.7|Srfbp1|ENSMUSG00000024528.7|serum response factor binding protein 1
mm10_v2_chr4_+_150236816_150236952	0.0903231	Emx1_Emx2	ENSMUST00000080926.6|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr11_-_79962374_79962398	0.0884713	Emx1_Emx2	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr1_-_40085823_40085862	0.0825289	Emx1_Emx2	ENSMUST00000181756.1|Gm16894|ENSMUSG00000097899.1|predicted gene, 16894
mm10_v2_chr1_-_86111970_86111984	0.0777349	Emx1_Emx2	ENSMUST00000027431.6|Htr2b|ENSMUSG00000026228.6|5-hydroxytryptamine (serotonin) receptor 2B
mm10_v2_chr7_-_122101735_122101886	0.0768647	Emx1_Emx2	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chrX_+_106187100_106187179	0.0765016	Emx1_Emx2	ENSMUST00000081593.6|Pgk1|ENSMUSG00000062070.6|phosphoglycerate kinase 1
mm10_v2_chr4_-_99654983_99655116	0.0753355	Emx1_Emx2	ENSMUST00000136525.1|Gm12688|ENSMUSG00000086096.1|predicted gene 12688
mm10_v2_chr11_+_94967622_94967661	0.0750959	Emx1_Emx2	ENSMUST00000038928.5|Hils1|ENSMUSG00000038994.5|histone H1-like protein in spermatids 1
mm10_v2_chr4_-_150914401_150914480	0.0743023	Emx1_Emx2	ENSMUST00000105675.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr17_-_32822200_32822200	0.0731549	Emx1_Emx2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr3_-_96452306_96452306	0.0728132	Emx1_Emx2	ENSMUST00000093126.4|BC107364|ENSMUSG00000046317.8|cDNA sequence BC107364 	ENSMUST00000098841.3|BC107364|ENSMUSG00000046317.8|cDNA sequence BC107364
mm10_v2_chr3_-_130730375_130730398	0.0715274	Emx1_Emx2	ENSMUST00000079085.6|Rpl34|ENSMUSG00000062006.6|ribosomal protein L34
mm10_v2_chrX_+_56786527_56786564	0.0714477	Emx1_Emx2	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr1_-_144177259_144177372	0.070395	Emx1_Emx2	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr17_-_45686899_45686923	0.0691718	Emx1_Emx2	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr6_+_17749170_17749265	0.0663123	Emx1_Emx2	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr14_+_25979401_25979401	0.0659605	Emx1_Emx2	ENSMUST00000173580.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr4_+_19280850_19280907	0.0648256	Emx1_Emx2	ENSMUST00000102999.1|Cngb3|ENSMUSG00000056494.7|cyclic nucleotide gated channel beta 3
mm10_v2_chr17_-_45599603_45599623	0.0640116	Emx1_Emx2	ENSMUST00000171847.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000166633.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000169729.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr12_-_87444017_87444017	0.0636823	Emx1_Emx2	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr19_+_34217588_34217624	0.0636643	Emx1_Emx2	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr3_+_57425314_57425452	0.0635386	Emx1_Emx2	ENSMUST00000029377.7|Tm4sf4|ENSMUSG00000027801.7|transmembrane 4 superfamily member 4
mm10_v2_chr16_+_11406618_11406675	0.0628321	Emx1_Emx2	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_131334529_131334622	0.0611883	Emx1_Emx2	ENSMUST00000084505.4|Fam24a|ENSMUSG00000030859.7|family with sequence similarity 24, member A
mm10_v2_chr2_+_121506748_121506792	0.0600971	Emx1_Emx2	ENSMUST00000099473.3|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76 	ENSMUST00000110602.2|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76
mm10_v2_chr8_-_107588392_107588482	0.0600452	Emx1_Emx2	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr1_-_97761538_97761609	0.0585943	Emx1_Emx2	ENSMUST00000171129.1|Ppip5k2|ENSMUSG00000040648.8|diphosphoinositol pentakisphosphate kinase 2
mm10_v2_chr7_+_44676965_44676965	0.0585144	Emx1_Emx2	ENSMUST00000094460.1|2310016G11Rik|ENSMUSG00000070574.1|RIKEN cDNA 2310016G11 gene
mm10_v2_chrX_-_134111852_134111873	0.0580145	Emx1_Emx2	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr10_+_69787431_69787458	0.0575119	Emx1_Emx2	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_-_106998483_106998491	0.0554882	Emx1_Emx2	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr14_+_26119173_26119173	0.0539964	Emx1_Emx2	ENSMUST00000174564.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr14_+_26258786_26258786	0.0539964	Emx1_Emx2	ENSMUST00000172517.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr2_-_12419387_12419399	0.0530524	Emx1_Emx2	ENSMUST00000124515.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr1_+_63176818_63176919	0.0526485	Emx1_Emx2	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr1_-_4785671_4785744	0.0526052	Emx1_Emx2	ENSMUST00000130201.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15 	ENSMUST00000156816.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15
mm10_v2_chr4_-_82505707_82505739	0.0515228	Emx1_Emx2	ENSMUST00000107248.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107247.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr12_-_56345862_56345894	0.0512938	Emx1_Emx2	ENSMUST00000021416.7|Mbip|ENSMUSG00000021028.7|MAP3K12 binding inhibitory protein 1
mm10_v2_chr13_-_4609122_4609189	0.0510185	Emx1_Emx2	ENSMUST00000110691.3|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1 	ENSMUST00000091848.5|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1
mm10_v2_chr4_+_147553277_147553339	0.0510078	Emx1_Emx2	ENSMUST00000139784.1|Gm13154|ENSMUSG00000065999.7|predicted gene 13154 	ENSMUST00000143885.1|Gm13154|ENSMUSG00000065999.7|predicted gene 13154 	ENSMUST00000081742.6|Gm13154|ENSMUSG00000065999.7|predicted gene 13154
mm10_v2_chr17_+_37529957_37529957	0.0505513	Emx1_Emx2	ENSMUST00000097325.3|Olfr111|ENSMUSG00000090675.1|olfactory receptor 111
mm10_v2_chr5_-_139345149_139345233	0.0502128	Emx1_Emx2	ENSMUST00000049630.6|Cox19|ENSMUSG00000045438.6|cytochrome c oxidase assembly protein 19
mm10_v2_chr4_-_149099802_149099876	0.0478111	Emx1_Emx2	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr16_-_76022266_76022287	0.0477867	Emx1_Emx2	ENSMUST00000114240.1|Samsn1|ENSMUSG00000022876.11|SAM domain, SH3 domain and nuclear localization signals, 1
mm10_v2_chr10_-_80918212_80918256	0.0477598	Emx1_Emx2	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr9_+_87022014_87022179	0.0477226	Emx1_Emx2	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr5_+_135009152_135009317	0.0472483	Emx1_Emx2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chr2_+_30171486_30171497	0.0466468	Emx1_Emx2	ENSMUST00000015481.5|Endog|ENSMUSG00000015337.5|endonuclease G
mm10_v2_chr2_+_151543877_151543899	0.0465539	Emx1_Emx2	ENSMUST00000142271.1|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chrX_+_139086226_139086250	0.0464428	Emx1_Emx2	ENSMUST00000033625.1|4930513O06Rik|ENSMUSG00000031270.1|RIKEN cDNA 4930513O06 gene
mm10_v2_chr4_+_56743406_56743438	0.0442157	Emx1_Emx2	ENSMUST00000095079.4|Actl7a|ENSMUSG00000070979.4|actin-like 7a
mm10_v2_chr9_-_14500482_14500503	0.0436449	Emx1_Emx2	ENSMUST00000058796.6|Kdm4d|ENSMUSG00000053914.9|lysine (K)-specific demethylase 4D
mm10_v2_chr14_-_104522615_104522707	0.0422532	Emx1_Emx2	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr7_-_125491397_125491413	0.042045	Emx1_Emx2	ENSMUST00000138616.1|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr3_-_146495115_146495139	0.0420373	Emx1_Emx2	ENSMUST00000093951.2|Spata1|ENSMUSG00000028188.7|spermatogenesis associated 1
mm10_v2_chr9_+_108648720_108648840	0.0413586	Emx1_Emx2	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr12_+_112760652_112760659	0.0409948	Emx1_Emx2	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr3_+_63976106_63976135	0.0398312	Emx1_Emx2	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr4_+_145510759_145510791	0.0388456	Emx1_Emx2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chrX_-_160138375_160138435	0.0388281	Emx1_Emx2	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr2_-_12419456_12419474	0.0379231	Emx1_Emx2	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr7_+_24636566_24636589	0.0374346	Emx1_Emx2	ENSMUST00000080718.4|Lypd3|ENSMUSG00000057454.4|Ly6/Plaur domain containing 3
mm10_v2_chr5_-_87535113_87535146	0.0370958	Emx1_Emx2	ENSMUST00000120150.1|Sult1b1|ENSMUSG00000029269.5|sulfotransferase family 1B, member 1
mm10_v2_chr1_-_63176653_63176822	0.0368844	Emx1_Emx2	ENSMUST00000027111.8|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1 	ENSMUST00000168099.2|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm10_v2_chr3_+_121953213_121953295	0.0354486	Emx1_Emx2	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chrX_-_8193387_8193512	0.0341561	Emx1_Emx2	ENSMUST00000143223.1|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein 	ENSMUST00000033509.8|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm10_v2_chr2_-_5676046_5676065	0.0341191	Emx1_Emx2	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr8_+_93810832_93810843	0.0327063	Emx1_Emx2	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr6_+_129533183_129533205	0.0326058	Emx1_Emx2	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr2_+_175372436_175372492	0.0319535	Emx1_Emx2	ENSMUST00000131676.1|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109048.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109047.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723
mm10_v2_chr7_+_132610620_132610662	0.0316985	Emx1_Emx2	ENSMUST00000033241.5|Lhpp|ENSMUSG00000030946.6|phospholysine phosphohistidine inorganic pyrophosphate phosphatase
mm10_v2_chr7_-_38019505_38019552	0.0316659	Emx1_Emx2	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr13_-_99516537_99516602	0.0312124	Emx1_Emx2	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr10_-_127030789_127030812	0.031126	Emx1_Emx2	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chrM_+_11734_11757	0.0309444	Emx1_Emx2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr1_-_187215454_187215478	0.0303695	Emx1_Emx2	ENSMUST00000183819.1|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17
mm10_v2_chr1_+_93685574_93685694	0.0295788	Emx1_Emx2	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr14_+_73510014_73510055	0.0289734	Emx1_Emx2	ENSMUST00000022705.5|Med4|ENSMUSG00000022109.5|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm10_v2_chr3_+_108571699_108571699	0.0287513	Emx1_Emx2	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr8_-_85432841_85432859	0.0284817	Emx1_Emx2	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr10_-_42583628_42583639	0.0283919	Emx1_Emx2	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr4_-_134245579_134245604	0.0283829	Emx1_Emx2	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr3_+_146852359_146852438	0.0271645	Emx1_Emx2	ENSMUST00000038090.5|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7 	ENSMUST00000170055.1|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7
mm10_v2_chr11_+_97029925_97029997	0.0268051	Emx1_Emx2	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr13_-_106847267_106847267	0.0263588	Emx1_Emx2	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr6_-_57535422_57535447	0.0258783	Emx1_Emx2	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr12_-_87443800_87443850	0.0250991	Emx1_Emx2	ENSMUST00000162961.1|Alkbh1|ENSMUSG00000079036.4|alkB, alkylation repair homolog 1 (E. coli)
mm10_v2_chr11_-_78245942_78245987	0.024739	Emx1_Emx2	ENSMUST00000002121.4|Supt6|ENSMUSG00000002052.6|suppressor of Ty 6
mm10_v2_chr8_+_81773105_81773120	0.0244411	Emx1_Emx2	ENSMUST00000170160.1|Inpp4b|ENSMUSG00000037940.9|inositol polyphosphate-4-phosphatase, type II
mm10_v2_chr6_+_124304646_124304671	0.0243594	Emx1_Emx2	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr7_+_126976338_126976400	0.0243427	Emx1_Emx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr2_-_37647199_37647285	0.0237527	Emx1_Emx2	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr3_-_145032765_145032781	0.0236036	Emx1_Emx2	ENSMUST00000029919.5|Clca3|ENSMUSG00000028255.5|chloride channel calcium activated 3
mm10_v2_chr2_-_175703646_175703646	0.0235412	Emx1_Emx2	ENSMUST00000109027.2|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000179061.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000131041.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245
mm10_v2_chr17_+_46772635_46772635	0.0233695	Emx1_Emx2	ENSMUST00000071430.5|2310039H08Rik|ENSMUSG00000062619.5|RIKEN cDNA 2310039H08 gene
mm10_v2_chr3_+_88716884_88716906	0.0230023	Emx1_Emx2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr15_-_36496722_36496808	0.0229345	Emx1_Emx2	ENSMUST00000057486.7|Ankrd46|ENSMUSG00000048307.7|ankyrin repeat domain 46
mm10_v2_chrX_-_102505359_102505412	0.0229268	Emx1_Emx2	ENSMUST00000087916.4|Hdac8|ENSMUSG00000067567.6|histone deacetylase 8
mm10_v2_chr6_-_144209471_144209487	0.0219069	Emx1_Emx2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr3_-_37125943_37125969	0.0214378	Emx1_Emx2	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr17_+_5799491_5799614	0.0210568	Emx1_Emx2	ENSMUST00000181484.1|3300005D01Rik|ENSMUSG00000096965.1|RIKEN cDNA 3300005D01 gene
mm10_v2_chr13_-_97747399_97747414	0.0204496	Emx1_Emx2	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chrM_+_2743_2761	0.0203729	Emx1_Emx2	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr3_+_88716838_88716883	0.019261	Emx1_Emx2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr14_-_96519067_96519102	0.0182109	Emx1_Emx2	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chr7_-_101845300_101845339	0.0179733	Emx1_Emx2	ENSMUST00000094141.5|Folr2|ENSMUSG00000032725.9|folate receptor 2 (fetal)
mm10_v2_chr8_+_72219726_72219785	0.0170708	Emx1_Emx2	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr3_+_32436151_32436151	0.0169528	Emx1_Emx2	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr8_+_31089471_31089760	0.016698	Emx1_Emx2	ENSMUST00000036631.7|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative) 	ENSMUST00000170204.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr4_-_82505749_82505802	0.0162803	Emx1_Emx2	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr9_-_73968901_73968999	0.0160008	Emx1_Emx2	ENSMUST00000184666.1|Unc13c|ENSMUSG00000062151.7|unc-13 homolog C (C. elegans)
mm10_v2_chr7_+_43672003_43672040	0.0155994	Emx1_Emx2	ENSMUST00000038332.8|Ctu1|ENSMUSG00000038888.8|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm10_v2_chr4_+_146502027_146502027	0.0155816	Emx1_Emx2	ENSMUST00000105735.2|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr4_+_112232245_112232274	0.014793	Emx1_Emx2	ENSMUST00000038455.5|Skint3|ENSMUSG00000070868.5|selection and upkeep of intraepithelial T cells 3 	ENSMUST00000170945.1|Skint3|ENSMUSG00000070868.5|selection and upkeep of intraepithelial T cells 3
mm10_v2_chr9_-_53667429_53667521	0.0144727	Emx1_Emx2	ENSMUST00000166367.1|Cul5|ENSMUSG00000032030.10|cullin 5 	ENSMUST00000034529.7|Cul5|ENSMUSG00000032030.10|cullin 5
mm10_v2_chr1_+_58113136_58113184	0.0144197	Emx1_Emx2	ENSMUST00000040999.7|Aox3|ENSMUSG00000064294.6|aldehyde oxidase 3
mm10_v2_chr2_+_175469985_175470063	0.0142732	Emx1_Emx2	ENSMUST00000109042.3|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109002.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109043.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000143490.1|Gm8923|ENSMUSG00000078896.5|predicted gene 8923
mm10_v2_chr11_+_17257558_17257688	0.0141319	Emx1_Emx2	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr4_+_147021850_147021850	0.0138192	Emx1_Emx2	ENSMUST00000075775.5|Rex2|ENSMUSG00000067919.8|reduced expression 2
mm10_v2_chr1_+_133610397_133610417	0.0138037	Emx1_Emx2	ENSMUST00000180718.1|Gm26706|ENSMUSG00000097014.1|predicted gene, 26706
mm10_v2_chr4_-_11254248_11254266	0.0137918	Emx1_Emx2	ENSMUST00000044616.3|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108319.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108318.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8
mm10_v2_chr2_-_155930018_155930066	0.0136406	Emx1_Emx2	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr6_+_114458519_114458519	0.0133385	Emx1_Emx2	ENSMUST00000160780.1|Hrh1|ENSMUSG00000053004.8|histamine receptor H1
mm10_v2_chr11_+_6560183_6560240	0.0131392	Emx1_Emx2	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr7_+_78783119_78783119	0.0126145	Emx1_Emx2	ENSMUST00000032840.4|Mrps11|ENSMUSG00000030611.4|mitochondrial ribosomal protein S11
mm10_v2_chr10_-_88605017_88605152	0.0125343	Emx1_Emx2	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr18_-_36726730_36726745	0.0121645	Emx1_Emx2	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr1_-_144775419_144775438	0.0120545	Emx1_Emx2	ENSMUST00000027603.3|Rgs18|ENSMUSG00000026357.3|regulator of G-protein signaling 18
mm10_v2_chr15_+_85510812_85510812	0.0120487	Emx1_Emx2	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr9_-_14500394_14500427	0.0116415	Emx1_Emx2	ENSMUST00000115647.2|Kdm4d|ENSMUSG00000053914.9|lysine (K)-specific demethylase 4D
mm10_v2_chr6_-_144209558_144209647	0.0115213	Emx1_Emx2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr6_-_144209448_144209469	0.0113982	Emx1_Emx2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr11_-_54249640_54249667	0.00996761	Emx1_Emx2	ENSMUST00000019060.5|Csf2|ENSMUSG00000018916.5|colony stimulating factor 2 (granulocyte-macrophage)
mm10_v2_chr2_-_155930190_155930310	0.00974112	Emx1_Emx2	ENSMUST00000109636.4|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109631.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr3_+_32515295_32515295	0.00884559	Emx1_Emx2	ENSMUST00000029203.7|Zfp639|ENSMUSG00000027667.8|zinc finger protein 639
mm10_v2_chr2_+_151494182_151494203	0.00883434	Emx1_Emx2	ENSMUST00000089140.6|Nsfl1c|ENSMUSG00000027455.10|NSFL1 (p97) cofactor (p47)
mm10_v2_chr9_+_14500611_14500620	0.00819596	Emx1_Emx2	ENSMUST00000004200.8|Cwc15|ENSMUSG00000004096.8|CWC15 homolog (S. cerevisiae)
mm10_v2_chr4_+_146156824_146156824	0.0078594	Emx1_Emx2	ENSMUST00000168483.2|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr8_+_45934610_45934661	0.00769391	Emx1_Emx2	ENSMUST00000095326.3|Ccdc110|ENSMUSG00000071104.3|coiled-coil domain containing 110
mm10_v2_chr12_-_87388317_87388355	0.00749582	Emx1_Emx2	ENSMUST00000021424.4|Sptlc2|ENSMUSG00000021036.4|serine palmitoyltransferase, long chain base subunit 2
mm10_v2_chr15_-_102510681_102510705	0.00701789	Emx1_Emx2	ENSMUST00000171565.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr2_-_34826071_34826087	0.00683157	Emx1_Emx2	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr4_+_145670685_145670685	0.00650642	Emx1_Emx2	ENSMUST00000105738.2|Gm13242|ENSMUSG00000058186.7|predicted gene 13242
mm10_v2_chr15_+_80711292_80711340	0.00583708	Emx1_Emx2	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr1_+_163779575_163779592	0.00565511	Emx1_Emx2	ENSMUST00000027877.6|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3 	ENSMUST00000077642.5|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3
mm10_v2_chr12_+_87443896_87443946	0.00559827	Emx1_Emx2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chr3_+_32436376_32436376	0.00550605	Emx1_Emx2	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr2_-_73580288_73580353	0.00490817	Emx1_Emx2	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr11_-_42000284_42000356	0.0048413	Emx1_Emx2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr3_-_75451818_75451818	0.00351601	Emx1_Emx2	ENSMUST00000178270.1|Wdr49|ENSMUSG00000095162.1|WD repeat domain 49
mm10_v2_chr2_+_144594054_144594083	0.00333073	Emx1_Emx2	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr11_+_72689997_72690015	0.00309664	Emx1_Emx2	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr10_-_25297055_25297101	0.00307667	Emx1_Emx2	ENSMUST00000177124.1|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr2_+_110721340_110721490	0.00270067	Emx1_Emx2	ENSMUST00000111016.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr15_+_99295087_99295279	0.00239638	Emx1_Emx2	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr8_-_125898291_125898322	0.00223757	Emx1_Emx2	ENSMUST00000047239.6|Pcnxl2|ENSMUSG00000060212.7|pecanex-like 2 (Drosophila)
mm10_v2_chr10_-_49783259_49783582	0.00222896	Emx1_Emx2	ENSMUST00000105484.3|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105486.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000079751.2|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105485.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr7_-_115846080_115846112	0.00200094	Emx1_Emx2	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr3_-_106219477_106219507	0.00185281	Emx1_Emx2	ENSMUST00000082219.5|Chi3l4|ENSMUSG00000063779.5|chitinase 3-like 4
mm10_v2_chr5_-_5266038_5266292	0.00150841	Emx1_Emx2	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr12_+_11438191_11438238	0.00145911	Emx1_Emx2	ENSMUST00000181268.1|4930511A02Rik|ENSMUSG00000097841.1|RIKEN cDNA 4930511A02 gene
mm10_v2_chr1_+_88306731_88306759	0.000574004	Emx1_Emx2	ENSMUST00000040210.7|Trpm8|ENSMUSG00000036251.10|transient receptor potential cation channel, subfamily M, member 8
mm10_v2_chr6_-_89595647_89595658	0.000424339	Emx1_Emx2	ENSMUST00000032172.8|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6 	ENSMUST00000113550.3|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6
