mm10_v2_chr12_-_119238794_119238863	1.28556	GGCAGUG	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr5_+_30588078_30588171	1.26083	GGCAGUG	ENSMUST00000066295.2|Kcnk3|ENSMUSG00000049265.6|potassium channel, subfamily K, member 3
mm10_v2_chr2_-_30903255_30903297	1.21468	GGCAGUG	ENSMUST00000102852.3|Ptges|ENSMUSG00000050737.11|prostaglandin E synthase
mm10_v2_chr17_-_67354459_67354485	1.20613	GGCAGUG	ENSMUST00000037974.8|Ptprm|ENSMUSG00000033278.9|protein tyrosine phosphatase, receptor type, M
mm10_v2_chr11_-_114066174_114066218	0.952133	GGCAGUG	ENSMUST00000041627.7|Sdk2|ENSMUSG00000041592.10|sidekick homolog 2 (chicken)
mm10_v2_chr9_-_53975246_53975348	0.906465	GGCAGUG	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr14_-_65425453_65425472	0.840439	GGCAGUG	ENSMUST00000059339.5|Pnoc|ENSMUSG00000045731.5|prepronociceptin
mm10_v2_chr12_-_12941827_12941914	0.826478	GGCAGUG	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr11_-_106160101_106160168	0.813172	GGCAGUG	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr18_+_38993126_38993186	0.801057	GGCAGUG	ENSMUST00000097593.2|Arhgap26|ENSMUSG00000036452.11|Rho GTPase activating protein 26
mm10_v2_chr1_-_172206775_172206804	0.762787	GGCAGUG	ENSMUST00000013842.5|Pea15a|ENSMUSG00000013698.6|phosphoprotein enriched in astrocytes 15A 	ENSMUST00000111247.1|Pea15a|ENSMUSG00000013698.6|phosphoprotein enriched in astrocytes 15A
mm10_v2_chr11_+_75193783_75193864	0.761429	GGCAGUG	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr1_-_174921813_174921827	0.759697	GGCAGUG	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr19_-_34747289_34747313	0.734101	GGCAGUG	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr11_+_104132841_104132855	0.717516	GGCAGUG	ENSMUST00000093925.4|Crhr1|ENSMUSG00000018634.10|corticotropin releasing hormone receptor 1
mm10_v2_chr6_+_45060036_45060067	0.715311	GGCAGUG	ENSMUST00000114641.1|Cntnap2|ENSMUSG00000039419.10|contactin associated protein-like 2
mm10_v2_chr4_+_120854786_120854843	0.708255	GGCAGUG	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr6_-_13839916_13839942	0.701293	GGCAGUG	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr10_-_109010955_109010983	0.695026	GGCAGUG	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chrX_+_71962971_71963013	0.674346	GGCAGUG	ENSMUST00000048790.6|Prrg3|ENSMUSG00000033361.7|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm10_v2_chr4_-_132922547_132922563	0.640135	GGCAGUG	ENSMUST00000030696.4|Fam76a|ENSMUSG00000028878.5|family with sequence similarity 76, member A
mm10_v2_chr11_-_102088471_102088530	0.637027	GGCAGUG	ENSMUST00000017458.4|Mpp2|ENSMUSG00000017314.6|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm10_v2_chr2_+_21367532_21367542	0.618285	GGCAGUG	ENSMUST00000055946.7|Gpr158|ENSMUSG00000045967.11|G protein-coupled receptor 158
mm10_v2_chr16_-_52454074_52454074	0.603038	GGCAGUG	ENSMUST00000023312.7|Alcam|ENSMUSG00000022636.7|activated leukocyte cell adhesion molecule
mm10_v2_chr12_-_84876479_84876532	0.59301	GGCAGUG	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr2_+_29802626_29802647	0.586526	GGCAGUG	ENSMUST00000080065.2|Slc27a4|ENSMUSG00000059316.2|solute carrier family 27 (fatty acid transporter), member 4
mm10_v2_chr6_+_108783059_108783116	0.58494	GGCAGUG	ENSMUST00000032196.6|Arl8b|ENSMUSG00000030105.6|ADP-ribosylation factor-like 8B
mm10_v2_chr7_-_27355944_27356019	0.584753	GGCAGUG	ENSMUST00000003857.6|Shkbp1|ENSMUSG00000089832.2|Sh3kbp1 binding protein 1
mm10_v2_chr7_-_99858872_99858906	0.577125	GGCAGUG	ENSMUST00000036274.6|Spcs2|ENSMUSG00000035227.6|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm10_v2_chr4_+_58943575_58943638	0.576847	GGCAGUG	ENSMUST00000107554.1|Zkscan16|ENSMUSG00000038630.8|zinc finger with KRAB and SCAN domains 16
mm10_v2_chr9_-_70657121_70657188	0.562686	GGCAGUG	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr6_+_29768443_29768542	0.562272	GGCAGUG	ENSMUST00000166718.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000102995.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000115242.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr12_-_50649190_50649281	0.562176	GGCAGUG	ENSMUST00000002765.7|Prkd1|ENSMUSG00000002688.7|protein kinase D1
mm10_v2_chr10_-_110000219_110000219	0.560761	GGCAGUG	ENSMUST00000032719.7|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr5_-_22344690_22344710	0.557158	GGCAGUG	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
mm10_v2_chr9_-_99436687_99436733	0.547894	GGCAGUG	ENSMUST00000035045.8|Mras|ENSMUSG00000032470.10|muscle and microspikes RAS
mm10_v2_chr9_+_74861888_74861921	0.543269	GGCAGUG	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr19_+_38264761_38264831	0.540715	GGCAGUG	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr9_-_100571049_100571128	0.537215	GGCAGUG	ENSMUST00000093792.2|Slc35g2|ENSMUSG00000070287.2|solute carrier family 35, member G2
mm10_v2_chrX_+_93286499_93286522	0.533636	GGCAGUG	ENSMUST00000046565.7|Arx|ENSMUSG00000035277.9|aristaless related homeobox 	ENSMUST00000113947.2|Arx|ENSMUSG00000035277.9|aristaless related homeobox
mm10_v2_chr8_-_26119125_26119233	0.526039	GGCAGUG	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr5_+_19907502_19907551	0.525953	GGCAGUG	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr15_-_98296083_98296157	0.518637	GGCAGUG	ENSMUST00000169721.1|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641 	ENSMUST00000023722.5|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641
mm10_v2_chr3_-_41082992_41083046	0.510752	GGCAGUG	ENSMUST00000058578.7|Pgrmc2|ENSMUSG00000049940.7|progesterone receptor membrane component 2
mm10_v2_chr15_+_98632220_98632390	0.508331	GGCAGUG	ENSMUST00000109150.1|Cacnb3|ENSMUSG00000003352.7|calcium channel, voltage-dependent, beta 3 subunit
mm10_v2_chr10_-_62340514_62340549	0.504531	GGCAGUG	ENSMUST00000099691.4|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr19_-_6840590_6840644	0.495034	GGCAGUG	ENSMUST00000170516.2|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4 	ENSMUST00000025903.5|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4
mm10_v2_chr1_-_191397026_191397041	0.488695	GGCAGUG	ENSMUST00000067976.3|Ppp2r5a|ENSMUSG00000026626.6|protein phosphatase 2, regulatory subunit B (B56), alpha isoform
mm10_v2_chr12_+_71831064_71831178	0.482895	GGCAGUG	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr12_-_101819048_101819061	0.478716	GGCAGUG	ENSMUST00000021603.8|Fbln5|ENSMUSG00000021186.8|fibulin 5
mm10_v2_chr3_-_27710413_27710467	0.475036	GGCAGUG	ENSMUST00000046157.4|Fndc3b|ENSMUSG00000039286.7|fibronectin type III domain containing 3B
mm10_v2_chr17_+_35916541_35916566	0.473224	GGCAGUG	ENSMUST00000087211.2|Ppp1r10|ENSMUSG00000039220.10|protein phosphatase 1, regulatory subunit 10
mm10_v2_chr15_-_79546741_79546787	0.472789	GGCAGUG	ENSMUST00000054014.7|Ddx17|ENSMUSG00000055065.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm10_v2_chr2_+_172345565_172345590	0.472528	GGCAGUG	ENSMUST00000028995.4|Fam210b|ENSMUSG00000027495.4|family with sequence similarity 210, member B
mm10_v2_chr17_-_51832666_51832678	0.471962	GGCAGUG	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chrX_+_163908982_163909017	0.471658	GGCAGUG	ENSMUST00000069041.8|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr6_-_13871477_13871518	0.470342	GGCAGUG	ENSMUST00000139231.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr4_-_126533472_126533613	0.463745	GGCAGUG	ENSMUST00000084289.4|Ago4|ENSMUSG00000042500.11|argonaute RISC catalytic subunit 4
mm10_v2_chr3_+_94478831_94478831	0.45813	GGCAGUG	ENSMUST00000029784.5|Celf3|ENSMUSG00000028137.5|CUGBP, Elav-like family member 3
mm10_v2_chr3_+_107101551_107101567	0.457882	GGCAGUG	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr8_+_95703037_95703063	0.451808	GGCAGUG	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr5_+_134099704_134099760	0.446373	GGCAGUG	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr11_+_88099146_88099181	0.439206	GGCAGUG	ENSMUST00000018522.6|Cuedc1|ENSMUSG00000018378.7|CUE domain containing 1
mm10_v2_chrX_+_99136119_99136138	0.436797	GGCAGUG	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr16_-_23988852_23988852	0.433126	GGCAGUG	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr9_+_35211155_35211224	0.42558	GGCAGUG	ENSMUST00000034541.5|Srpr|ENSMUSG00000032042.5|signal recognition particle receptor ('docking protein')
mm10_v2_chr15_-_78120011_78120033	0.424292	GGCAGUG	ENSMUST00000019290.2|Cacng2|ENSMUSG00000019146.2|calcium channel, voltage-dependent, gamma subunit 2
mm10_v2_chr14_-_72709986_72710027	0.422724	GGCAGUG	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr11_+_69088490_69088553	0.421652	GGCAGUG	ENSMUST00000021273.6|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2 	ENSMUST00000117780.1|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2
mm10_v2_chr1_+_93754899_93754932	0.413001	GGCAGUG	ENSMUST00000027502.9|Atg4b|ENSMUSG00000026280.11|autophagy related 4B, cysteine peptidase
mm10_v2_chr11_+_104231390_104231453	0.410616	GGCAGUG	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr12_-_87200200_87200284	0.403596	GGCAGUG	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr9_+_45117813_45117881	0.399735	GGCAGUG	ENSMUST00000170998.1|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta 	ENSMUST00000093855.3|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta
mm10_v2_chr3_-_107518001_107518023	0.395481	GGCAGUG	ENSMUST00000169449.1|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17 	ENSMUST00000029499.8|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17
mm10_v2_chr15_-_102257449_102257517	0.393195	GGCAGUG	ENSMUST00000043172.8|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr8_+_25518757_25518772	0.392758	GGCAGUG	ENSMUST00000178276.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000179592.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chr2_+_4400958_4400975	0.390464	GGCAGUG	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr11_-_74897052_74897094	0.388216	GGCAGUG	ENSMUST00000057631.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2 	ENSMUST00000081799.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2
mm10_v2_chrX_-_38252398_38252439	0.384284	GGCAGUG	ENSMUST00000089056.3|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000089054.4|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000066498.7|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A
mm10_v2_chr9_-_107635330_107635353	0.38065	GGCAGUG	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chr2_-_93334467_93334515	0.379124	GGCAGUG	ENSMUST00000111265.2|Tspan18|ENSMUSG00000027217.7|tetraspanin 18
mm10_v2_chr5_+_113490447_113490548	0.372068	GGCAGUG	ENSMUST00000094452.3|Wscd2|ENSMUSG00000063430.8|WSC domain containing 2
mm10_v2_chr4_-_126968124_126968154	0.371989	GGCAGUG	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr9_-_101251810_101251839	0.370719	GGCAGUG	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr17_-_15375969_15375983	0.362242	GGCAGUG	ENSMUST00000014917.7|Dll1|ENSMUSG00000014773.7|delta-like 1 (Drosophila)
mm10_v2_chr4_-_147936713_147936767	0.359626	GGCAGUG	ENSMUST00000105712.1|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 	ENSMUST00000019199.7|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm10_v2_chr13_+_54371340_54371352	0.351257	GGCAGUG	ENSMUST00000026985.8|Cplx2|ENSMUSG00000025867.8|complexin 2
mm10_v2_chrX_-_48454152_48454193	0.335963	GGCAGUG	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr8_+_75033673_75033702	0.335448	GGCAGUG	ENSMUST00000078847.5|Tom1|ENSMUSG00000042870.8|target of myb1 homolog (chicken) 	ENSMUST00000165630.1|Tom1|ENSMUSG00000042870.8|target of myb1 homolog (chicken)
mm10_v2_chr18_-_66002612_66002637	0.33424	GGCAGUG	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr3_+_27182965_27182986	0.329258	GGCAGUG	ENSMUST00000046515.8|Nceh1|ENSMUSG00000027698.8|neutral cholesterol ester hydrolase 1
mm10_v2_chrX_+_142681398_142681439	0.328816	GGCAGUG	ENSMUST00000112889.1|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000101198.2|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000112891.1|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000087333.2|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164
mm10_v2_chr1_-_161876656_161876682	0.323898	GGCAGUG	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr2_+_155381808_155381884	0.323283	GGCAGUG	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr12_+_77239036_77239074	0.321917	GGCAGUG	ENSMUST00000062804.7|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr16_+_33251415_33251456	0.320017	GGCAGUG	ENSMUST00000023502.4|Snx4|ENSMUSG00000022808.4|sorting nexin 4
mm10_v2_chr2_+_156840077_156840141	0.309255	GGCAGUG	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr11_+_101176041_101176041	0.304987	GGCAGUG	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chrX_+_49470450_49470548	0.301778	GGCAGUG	ENSMUST00000114904.3|Arhgap36|ENSMUSG00000036198.6|Rho GTPase activating protein 36
mm10_v2_chr14_+_30479565_30479685	0.298903	GGCAGUG	ENSMUST00000022535.7|Dcp1a|ENSMUSG00000021962.8|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm10_v2_chr11_-_96824008_96824159	0.297752	GGCAGUG	ENSMUST00000142065.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000167110.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000169828.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000126949.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1
mm10_v2_chr19_-_7105729_7105729	0.294456	GGCAGUG	ENSMUST00000113383.2|Flrt1|ENSMUSG00000047787.7|fibronectin leucine rich transmembrane protein 1
mm10_v2_chr12_+_76533540_76533597	0.294338	GGCAGUG	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm10_v2_chr11_-_101466222_101466237	0.293819	GGCAGUG	ENSMUST00000040430.7|Vat1|ENSMUSG00000034993.7|vesicle amine transport protein 1 homolog (T californica)
mm10_v2_chr7_+_43463145_43463185	0.292343	GGCAGUG	ENSMUST00000107977.1|Vsig10l|ENSMUSG00000070604.3|ZV-set and immunoglobulin domain containing 10 like
mm10_v2_chr14_+_63436394_63436525	0.289608	GGCAGUG	ENSMUST00000121288.1|Fam167a|ENSMUSG00000035095.11|family with sequence similarity 167, member A
mm10_v2_chr6_+_4747306_4747372	0.28957	GGCAGUG	ENSMUST00000175823.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000176204.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000166678.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr11_-_107470699_107470726	0.289001	GGCAGUG	ENSMUST00000103064.3|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr6_-_87811771_87811802	0.287137	GGCAGUG	ENSMUST00000078647.4|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family 	ENSMUST00000032135.5|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr13_-_36734450_36734492	0.286429	GGCAGUG	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr9_-_56928350_56928392	0.284068	GGCAGUG	ENSMUST00000050916.5|Snx33|ENSMUSG00000032733.5|sorting nexin 33
mm10_v2_chr15_-_99528017_99528017	0.281452	GGCAGUG	ENSMUST00000023750.7|Faim2|ENSMUSG00000023011.7|Fas apoptotic inhibitory molecule 2
mm10_v2_chr6_-_118197732_118197744	0.27998	GGCAGUG	ENSMUST00000032201.5|Ret|ENSMUSG00000030110.7|ret proto-oncogene 	ENSMUST00000088790.3|Ret|ENSMUSG00000030110.7|ret proto-oncogene
mm10_v2_chr8_+_40862379_40862578	0.279758	GGCAGUG	ENSMUST00000098816.3|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000057784.8|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000141505.1|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
mm10_v2_chr16_-_91011093_91011113	0.278842	GGCAGUG	ENSMUST00000170853.1|Synj1|ENSMUSG00000022973.11|synaptojanin 1 	ENSMUST00000118390.2|Synj1|ENSMUSG00000022973.11|synaptojanin 1
mm10_v2_chr11_-_96977660_96977711	0.278235	GGCAGUG	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr13_+_13590402_13590456	0.26919	GGCAGUG	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr11_-_51857624_51857686	0.267319	GGCAGUG	ENSMUST00000020655.7|Phf15|ENSMUSG00000020387.9|PHD finger protein 15 	ENSMUST00000109090.1|Phf15|ENSMUSG00000020387.9|PHD finger protein 15
mm10_v2_chr15_+_30172570_30172600	0.267126	GGCAGUG	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr14_+_14703025_14703073	0.263584	GGCAGUG	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr10_+_61680302_61680361	0.256433	GGCAGUG	ENSMUST00000020285.8|Sar1a|ENSMUSG00000020088.9|SAR1 gene homolog A (S. cerevisiae)
mm10_v2_chr2_-_26445175_26445226	0.255185	GGCAGUG	ENSMUST00000114082.2|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae) 	ENSMUST00000091252.4|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae)
mm10_v2_chr1_+_91540553_91540578	0.245229	GGCAGUG	ENSMUST00000027538.7|Asb1|ENSMUSG00000026311.10|ankyrin repeat and SOCS box-containing 1
mm10_v2_chr2_+_106693185_106693278	0.243935	GGCAGUG	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr2_+_179442427_179442442	0.2437	GGCAGUG	ENSMUST00000000314.6|Cdh4|ENSMUSG00000000305.6|cadherin 4
mm10_v2_chr4_-_151861762_151861876	0.240894	GGCAGUG	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr8_-_41133697_41133755	0.235784	GGCAGUG	ENSMUST00000155055.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000059115.6|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000145860.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr1_+_180726019_180726106	0.232901	GGCAGUG	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chrX_-_143933204_143933311	0.230163	GGCAGUG	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr1_+_93803945_93803998	0.229165	GGCAGUG	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr11_+_62281457_62281495	0.227912	GGCAGUG	ENSMUST00000101075.4|Ttc19|ENSMUSG00000042298.12|tetratricopeptide repeat domain 19 	ENSMUST00000050646.6|Ttc19|ENSMUSG00000042298.12|tetratricopeptide repeat domain 19
mm10_v2_chr11_-_98587193_98587368	0.227396	GGCAGUG	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr12_+_37880700_37880728	0.227086	GGCAGUG	ENSMUST00000040500.7|Dgkb|ENSMUSG00000036095.10|diacylglycerol kinase, beta
mm10_v2_chr11_-_7213897_7213929	0.224971	GGCAGUG	ENSMUST00000020702.4|Igfbp3|ENSMUSG00000020427.5|insulin-like growth factor binding protein 3 	ENSMUST00000135887.2|Igfbp3|ENSMUSG00000020427.5|insulin-like growth factor binding protein 3
mm10_v2_chr2_+_136713444_136713492	0.223753	GGCAGUG	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr6_+_17463749_17463809	0.223055	GGCAGUG	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr1_+_176814660_176814660	0.222844	GGCAGUG	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr2_+_164832862_164832878	0.220477	GGCAGUG	ENSMUST00000103093.3|Ctsa|ENSMUSG00000017760.9|cathepsin A 	ENSMUST00000017904.2|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr6_-_31563978_31563989	0.218844	GGCAGUG	ENSMUST00000026698.7|Podxl|ENSMUSG00000025608.9|podocalyxin-like
mm10_v2_chr7_-_126799163_126799254	0.217267	GGCAGUG	ENSMUST00000032934.5|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr10_-_5922385_5922407	0.214627	GGCAGUG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr1_-_36558349_36558366	0.214102	GGCAGUG	ENSMUST00000114991.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000114992.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr4_-_59549314_59549364	0.213766	GGCAGUG	ENSMUST00000148331.2|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000030076.5|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr5_-_114444036_114444059	0.210383	GGCAGUG	ENSMUST00000031560.7|Mmab|ENSMUSG00000029575.11|methylmalonic aciduria (cobalamin deficiency) type B homolog (human)
mm10_v2_chr2_+_155133501_155133559	0.209735	GGCAGUG	ENSMUST00000029126.8|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase 	ENSMUST00000109685.1|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase
mm10_v2_chr5_+_37050854_37050865	0.207077	GGCAGUG	ENSMUST00000043794.4|Jakmip1|ENSMUSG00000063646.7|janus kinase and microtubule interacting protein 1
mm10_v2_chr19_-_6128208_6128304	0.206524	GGCAGUG	ENSMUST00000025702.7|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr8_-_80880479_80880499	0.204106	GGCAGUG	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr15_-_97767798_97767972	0.201523	GGCAGUG	ENSMUST00000129223.2|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3 	ENSMUST00000126854.2|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3 	ENSMUST00000135080.1|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr15_-_3995708_3995760	0.19951	GGCAGUG	ENSMUST00000046633.8|AW549877|ENSMUSG00000041935.9|expressed sequence AW549877
mm10_v2_chr13_-_54687696_54687809	0.199032	GGCAGUG	ENSMUST00000177950.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000146931.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr7_+_45017953_45018009	0.197484	GGCAGUG	ENSMUST00000044111.7|Rras|ENSMUSG00000038387.7|Harvey rat sarcoma oncogene, subgroup R
mm10_v2_chr3_+_89229046_89229066	0.197318	GGCAGUG	ENSMUST00000041142.3|Muc1|ENSMUSG00000042784.3|mucin 1, transmembrane
mm10_v2_chr2_+_162943474_162943516	0.19622	GGCAGUG	ENSMUST00000035751.5|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila) 	ENSMUST00000156954.1|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila)
mm10_v2_chr9_-_89622986_89622986	0.194497	GGCAGUG	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr11_-_118419018_118419086	0.193268	GGCAGUG	ENSMUST00000092378.3|Cant1|ENSMUSG00000025575.8|calcium activated nucleotidase 1 	ENSMUST00000106289.2|Cant1|ENSMUSG00000025575.8|calcium activated nucleotidase 1 	ENSMUST00000106288.1|Cant1|ENSMUSG00000025575.8|calcium activated nucleotidase 1 	ENSMUST00000106287.1|Cant1|ENSMUSG00000025575.8|calcium activated nucleotidase 1 	ENSMUST00000017620.3|Cant1|ENSMUSG00000025575.8|calcium activated nucleotidase 1
mm10_v2_chr8_-_122699066_122699119	0.192533	GGCAGUG	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr11_+_61485431_61485461	0.192063	GGCAGUG	ENSMUST00000064783.3|Mfap4|ENSMUSG00000042436.6|microfibrillar-associated protein 4 	ENSMUST00000040522.6|Mfap4|ENSMUSG00000042436.6|microfibrillar-associated protein 4
mm10_v2_chr6_+_66896397_66896479	0.187964	GGCAGUG	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr5_+_91517615_91517694	0.184365	GGCAGUG	ENSMUST00000040576.9|Parm1|ENSMUSG00000034981.9|prostate androgen-regulated mucin-like protein 1
mm10_v2_chr7_-_90457167_90457229	0.183732	GGCAGUG	ENSMUST00000032844.5|Tmem126a|ENSMUSG00000030615.5|transmembrane protein 126A
mm10_v2_chr19_-_5273080_5273129	0.182432	GGCAGUG	ENSMUST00000025786.7|Pacs1|ENSMUSG00000024855.9|phosphofurin acidic cluster sorting protein 1
mm10_v2_chr15_+_89499598_89499653	0.178131	GGCAGUG	ENSMUST00000109309.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr15_-_79403248_79403309	0.177436	GGCAGUG	ENSMUST00000074991.2|Tmem184b|ENSMUSG00000009035.7|transmembrane protein 184b
mm10_v2_chr1_-_84284548_84284645	0.175709	GGCAGUG	ENSMUST00000177458.1|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1 	ENSMUST00000168574.2|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1
mm10_v2_chr16_-_21694570_21694665	0.171408	GGCAGUG	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr9_+_94669876_94669928	0.170995	GGCAGUG	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr12_+_52699297_52699411	0.169074	GGCAGUG	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr17_+_26715644_26715724	0.165704	GGCAGUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr10_+_91082940_91083028	0.165254	GGCAGUG	ENSMUST00000020150.3|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr3_+_95588928_95588953	0.164844	GGCAGUG	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr10_+_127642975_127643034	0.161383	GGCAGUG	ENSMUST00000092074.5|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6 	ENSMUST00000120279.1|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6
mm10_v2_chr8_+_4166556_4166739	0.161146	GGCAGUG	ENSMUST00000177053.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176149.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176072.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176825.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like
mm10_v2_chr19_+_6418731_6418810	0.160831	GGCAGUG	ENSMUST00000113462.1|Nrxn2|ENSMUSG00000033768.10|neurexin II 	ENSMUST00000077182.6|Nrxn2|ENSMUSG00000033768.10|neurexin II 	ENSMUST00000113461.1|Nrxn2|ENSMUSG00000033768.10|neurexin II
mm10_v2_chr1_+_75521521_75521602	0.159509	GGCAGUG	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr9_-_50727921_50728008	0.159316	GGCAGUG	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr12_+_64917901_64917944	0.159095	GGCAGUG	ENSMUST00000058135.4|Gm527|ENSMUSG00000047227.4|predicted gene 527
mm10_v2_chr10_-_115315546_115315615	0.154857	GGCAGUG	ENSMUST00000020343.7|Rab21|ENSMUSG00000020132.9|RAB21, member RAS oncogene family
mm10_v2_chr12_+_71015966_71016063	0.152192	GGCAGUG	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr8_-_60983215_60983319	0.152118	GGCAGUG	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr2_+_20737306_20737321	0.151738	GGCAGUG	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr19_+_8941865_8942050	0.15066	GGCAGUG	ENSMUST00000096240.2|Mta2|ENSMUSG00000071646.3|metastasis-associated gene family, member 2
mm10_v2_chr7_+_117380937_117380992	0.147162	GGCAGUG	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr1_-_36445248_36445271	0.146006	GGCAGUG	ENSMUST00000125304.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like 	ENSMUST00000115011.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like
mm10_v2_chr8_-_70439557_70439612	0.144621	GGCAGUG	ENSMUST00000076615.5|Crtc1|ENSMUSG00000003575.7|CREB regulated transcription coactivator 1
mm10_v2_chr5_+_117841839_117841857	0.142986	GGCAGUG	ENSMUST00000142742.2|Nos1|ENSMUSG00000029361.12|nitric oxide synthase 1, neuronal
mm10_v2_chr9_-_64253617_64253635	0.141933	GGCAGUG	ENSMUST00000005066.8|Map2k1|ENSMUSG00000004936.8|mitogen-activated protein kinase kinase 1
mm10_v2_chr6_-_82939676_82939769	0.141402	GGCAGUG	ENSMUST00000000641.9|Sema4f|ENSMUSG00000000627.9|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain 	ENSMUST00000113982.1|Sema4f|ENSMUSG00000000627.9|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm10_v2_chr17_-_43667015_43667163	0.139594	GGCAGUG	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr4_-_49597860_49597892	0.138351	GGCAGUG	ENSMUST00000042750.2|Tmem246|ENSMUSG00000039611.2|transmembrane protein 246
mm10_v2_chr1_-_37541003_37541046	0.135225	GGCAGUG	ENSMUST00000151952.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr3_+_89245952_89245978	0.134057	GGCAGUG	ENSMUST00000040888.5|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr5_+_43233463_43233491	0.133147	GGCAGUG	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr9_-_43105718_43105793	0.133032	GGCAGUG	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr11_+_70657196_70657285	0.132951	GGCAGUG	ENSMUST00000157027.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000072841.5|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000108548.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000126241.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle
mm10_v2_chr14_+_14012491_14012693	0.132916	GGCAGUG	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr5_-_67427794_67427813	0.131652	GGCAGUG	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr1_-_54194048_54194048	0.13132	GGCAGUG	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr10_-_112928974_112929026	0.130954	GGCAGUG	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr19_+_16132812_16132910	0.130724	GGCAGUG	ENSMUST00000025541.5|Gnaq|ENSMUSG00000024639.5|guanine nucleotide binding protein, alpha q polypeptide
mm10_v2_chr5_-_106696819_106696839	0.128914	GGCAGUG	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr5_-_8367982_8368107	0.127517	GGCAGUG	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chrX_+_42149288_42149412	0.126754	GGCAGUG	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr8_-_111933761_111933816	0.12668	GGCAGUG	ENSMUST00000034429.7|Tmem231|ENSMUSG00000031951.7|transmembrane protein 231
mm10_v2_chr18_-_38211957_38212053	0.12626	GGCAGUG	ENSMUST00000159405.1|Pcdh1|ENSMUSG00000051375.9|protocadherin 1 	ENSMUST00000160721.1|Pcdh1|ENSMUSG00000051375.9|protocadherin 1
mm10_v2_chr14_+_103070216_103070233	0.126006	GGCAGUG	ENSMUST00000022721.6|Cln5|ENSMUSG00000022125.6|ceroid-lipofuscinosis, neuronal 5
mm10_v2_chr2_-_30124454_30124470	0.124556	GGCAGUG	ENSMUST00000044751.8|Zer1|ENSMUSG00000039686.8|zyg-11 related, cell cycle regulator
mm10_v2_chr19_+_8741413_8741461	0.12259	GGCAGUG	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr9_+_120303896_120303960	0.121517	GGCAGUG	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr3_+_69316857_69316869	0.12072	GGCAGUG	ENSMUST00000029355.6|Ppm1l|ENSMUSG00000027784.8|protein phosphatase 1 (formerly 2C)-like
mm10_v2_chr15_-_98831498_98831509	0.120464	GGCAGUG	ENSMUST00000168846.1|Prkag1|ENSMUSG00000067713.6|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
mm10_v2_chr3_+_105452326_105452365	0.119855	GGCAGUG	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr16_+_20548577_20548672	0.119458	GGCAGUG	ENSMUST00000003319.5|Abcf3|ENSMUSG00000003234.9|ATP-binding cassette, sub-family F (GCN20), member 3
mm10_v2_chr4_+_123917420_123917510	0.118867	GGCAGUG	ENSMUST00000030399.6|Rragc|ENSMUSG00000028646.10|Ras-related GTP binding C
mm10_v2_chr10_-_81060134_81060204	0.117877	GGCAGUG	ENSMUST00000005067.5|Sgta|ENSMUSG00000004937.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm10_v2_chr1_-_58586191_58586323	0.117674	GGCAGUG	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr11_-_75438900_75438946	0.116194	GGCAGUG	ENSMUST00000108437.1|Serpinf2|ENSMUSG00000038224.6|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm10_v2_chr10_+_94036001_94036121	0.111526	GGCAGUG	ENSMUST00000020208.4|Fgd6|ENSMUSG00000020021.4|FYVE, RhoGEF and PH domain containing 6
mm10_v2_chr4_+_99929414_99929438	0.106791	GGCAGUG	ENSMUST00000058351.9|Pgm2|ENSMUSG00000025791.12|phosphoglucomutase 2
mm10_v2_chr7_+_80186835_80186904	0.106788	GGCAGUG	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr7_+_139085984_139086048	0.106039	GGCAGUG	ENSMUST00000026551.8|Dpysl4|ENSMUSG00000025478.9|dihydropyrimidinase-like 4
mm10_v2_chr7_-_4844665_4844699	0.105661	GGCAGUG	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr2_+_180967218_180967289	0.104685	GGCAGUG	ENSMUST00000108862.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000029092.6|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000108861.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000108860.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1
mm10_v2_chr15_-_99820072_99820154	0.104299	GGCAGUG	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr15_+_66577536_66577637	0.101976	GGCAGUG	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chrX_+_56346390_56346415	0.101881	GGCAGUG	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr2_-_33371400_33371484	0.0975449	GGCAGUG	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr11_+_53350783_53350833	0.0972096	GGCAGUG	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr9_+_108991902_108991969	0.0947731	GGCAGUG	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr17_+_28801090_28801145	0.0942925	GGCAGUG	ENSMUST00000004985.9|Brpf3|ENSMUSG00000063952.9|bromodomain and PHD finger containing, 3
mm10_v2_chr14_-_70159433_70159502	0.0933639	GGCAGUG	ENSMUST00000058240.7|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene 	ENSMUST00000153871.1|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene
mm10_v2_chr11_+_75650501_75650544	0.0931544	GGCAGUG	ENSMUST00000102505.3|Myo1c|ENSMUSG00000017774.13|myosin IC
mm10_v2_chr5_+_30814571_30814641	0.0928807	GGCAGUG	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr15_+_88982894_88982994	0.0918376	GGCAGUG	ENSMUST00000146993.1|Mov10l1|ENSMUSG00000015365.9|Moloney leukemia virus 10-like 1 	ENSMUST00000015509.4|Mov10l1|ENSMUSG00000015365.9|Moloney leukemia virus 10-like 1
mm10_v2_chr2_-_63184253_63184292	0.0909728	GGCAGUG	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chrX_+_73716577_73716618	0.0900784	GGCAGUG	ENSMUST00000002084.7|Abcd1|ENSMUSG00000031378.8|ATP-binding cassette, sub-family D (ALD), member 1
mm10_v2_chr6_+_38433913_38433965	0.0877095	GGCAGUG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr11_+_116918844_116918888	0.0874947	GGCAGUG	ENSMUST00000103027.3|Mgat5b|ENSMUSG00000043857.10|mannoside acetylglucosaminyltransferase 5, isoenzyme B
mm10_v2_chr14_-_70443442_70443476	0.0854612	GGCAGUG	ENSMUST00000000793.5|Polr3d|ENSMUSG00000000776.6|polymerase (RNA) III (DNA directed) polypeptide D
mm10_v2_chr1_-_156939626_156939657	0.0846992	GGCAGUG	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr1_-_132542934_132542954	0.0827873	GGCAGUG	ENSMUST00000086521.4|Cntn2|ENSMUSG00000053024.8|contactin 2
mm10_v2_chr1_+_134709293_134709318	0.0821372	GGCAGUG	ENSMUST00000121990.1|Syt2|ENSMUSG00000026452.9|synaptotagmin II
mm10_v2_chr6_-_101377897_101378016	0.0794215	GGCAGUG	ENSMUST00000075994.6|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr3_+_100825452_100825467	0.0787422	GGCAGUG	ENSMUST00000054791.7|Vtcn1|ENSMUSG00000051076.7|V-set domain containing T cell activation inhibitor 1
mm10_v2_chr9_+_77636494_77636528	0.0780358	GGCAGUG	ENSMUST00000057781.7|Klhl31|ENSMUSG00000044938.8|kelch-like 31
mm10_v2_chr5_-_34187670_34187749	0.0774059	GGCAGUG	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chrX_-_142306170_142306294	0.077357	GGCAGUG	ENSMUST00000134825.2|Kcne1l|ENSMUSG00000090122.3|potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene
mm10_v2_chr14_+_34819811_34819834	0.0768649	GGCAGUG	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr4_+_42916647_42916712	0.0756684	GGCAGUG	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr1_+_10993452_10993478	0.0754756	GGCAGUG	ENSMUST00000027056.5|Prex2|ENSMUSG00000048960.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm10_v2_chr11_-_98053415_98053467	0.0742523	GGCAGUG	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr19_+_30030439_30030528	0.0730264	GGCAGUG	ENSMUST00000025739.7|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr14_-_16575456_16575501	0.0729158	GGCAGUG	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr11_+_75630974_75631076	0.0726298	GGCAGUG	ENSMUST00000006286.2|Inpp5k|ENSMUSG00000006127.3|inositol polyphosphate 5-phosphatase K
mm10_v2_chr6_+_122819888_122819938	0.0718616	GGCAGUG	ENSMUST00000003238.7|Foxj2|ENSMUSG00000003154.9|forkhead box J2
mm10_v2_chr7_-_144553657_144553757	0.0706272	GGCAGUG	ENSMUST00000168134.3|Ppfia1|ENSMUSG00000037519.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm10_v2_chr6_+_47877204_47877204	0.0676576	GGCAGUG	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr19_-_41263931_41264008	0.0671989	GGCAGUG	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chr9_-_44799179_44799307	0.0664642	GGCAGUG	ENSMUST00000114705.1|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25 	ENSMUST00000002100.7|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25
mm10_v2_chr6_+_110645572_110645588	0.0636651	GGCAGUG	ENSMUST00000071076.6|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7 	ENSMUST00000172951.1|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7
mm10_v2_chr7_+_46845832_46845863	0.0635958	GGCAGUG	ENSMUST00000048209.9|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A 	ENSMUST00000092621.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr8_+_4493022_4493199	0.062231	GGCAGUG	ENSMUST00000177010.2|Cers4|ENSMUSG00000008206.9|ceramide synthase 4 	ENSMUST00000176042.1|Cers4|ENSMUSG00000008206.9|ceramide synthase 4 	ENSMUST00000008350.9|Cers4|ENSMUSG00000008206.9|ceramide synthase 4
mm10_v2_chr2_+_109917639_109917656	0.0618173	GGCAGUG	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr3_-_95106779_95106897	0.0604951	GGCAGUG	ENSMUST00000005768.7|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107232.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107236.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr16_+_17451981_17452034	0.0591541	GGCAGUG	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr11_+_116198853_116198903	0.0587205	GGCAGUG	ENSMUST00000021130.6|Ten1|ENSMUSG00000020778.6|TEN1 telomerase capping complex subunit
mm10_v2_chr12_-_75735729_75735736	0.0576039	GGCAGUG	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr13_-_8871696_8871749	0.0555595	GGCAGUG	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr6_+_86078070_86078089	0.0537784	GGCAGUG	ENSMUST00000032069.5|Add2|ENSMUSG00000030000.8|adducin 2 (beta)
mm10_v2_chr4_+_62286441_62286516	0.0527745	GGCAGUG	ENSMUST00000084530.2|Slc31a2|ENSMUSG00000066152.5|solute carrier family 31, member 2
mm10_v2_chr1_+_75360321_75360338	0.0519875	GGCAGUG	ENSMUST00000027409.9|Des|ENSMUSG00000026208.9|desmin
mm10_v2_chr2_+_129800451_129800526	0.0508739	GGCAGUG	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr11_-_28584260_28584324	0.0501019	GGCAGUG	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr11_+_5955693_5955821	0.0495704	GGCAGUG	ENSMUST00000002818.8|Ykt6|ENSMUSG00000002741.9|YKT6 homolog (S. Cerevisiae)
mm10_v2_chr8_-_105827190_105827350	0.0490253	GGCAGUG	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr5_+_122850186_122850198	0.0486899	GGCAGUG	ENSMUST00000031434.6|Rnf34|ENSMUSG00000029474.6|ring finger protein 34
mm10_v2_chr13_+_14063776_14063822	0.0479092	GGCAGUG	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr19_-_5924797_5924823	0.0477371	GGCAGUG	ENSMUST00000055458.4|Cdc42ep2|ENSMUSG00000045664.4|CDC42 effector protein (Rho GTPase binding) 2
mm10_v2_chr2_+_68861433_68861510	0.0476836	GGCAGUG	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr10_+_80602865_80602904	0.0467462	GGCAGUG	ENSMUST00000038411.4|Adat3|ENSMUSG00000035370.7|adenosine deaminase, tRNA-specific 3 	ENSMUST00000079883.4|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr17_-_36951636_36951741	0.0454255	GGCAGUG	ENSMUST00000040402.7|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11 	ENSMUST00000174711.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr2_+_28513243_28513326	0.0453273	GGCAGUG	ENSMUST00000028170.8|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr9_+_68653761_68653786	0.0449538	GGCAGUG	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr6_+_127887582_127887639	0.043326	GGCAGUG	ENSMUST00000032501.4|Tspan11|ENSMUSG00000030351.4|tetraspanin 11
mm10_v2_chr18_+_61045139_61045206	0.0427964	GGCAGUG	ENSMUST00000025522.4|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide 	ENSMUST00000115274.1|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide
mm10_v2_chr4_-_55532453_55532485	0.04138	GGCAGUG	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr9_-_106438207_106438236	0.0385533	GGCAGUG	ENSMUST00000024031.6|Acy1|ENSMUSG00000023262.6|aminoacylase 1
mm10_v2_chr2_-_84650714_84650749	0.0380253	GGCAGUG	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr9_-_36797273_36797293	0.0377566	GGCAGUG	ENSMUST00000163192.3|Ei24|ENSMUSG00000062762.9|etoposide induced 2.4 mRNA
mm10_v2_chr9_+_70678950_70679010	0.0365134	GGCAGUG	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr17_-_47688028_47688183	0.0324187	GGCAGUG	ENSMUST00000113301.1|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast) 	ENSMUST00000113302.3|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast)
mm10_v2_chr4_+_59805829_59805914	0.0316433	GGCAGUG	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr5_-_76304474_76304548	0.030978	GGCAGUG	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr5_-_143269958_143270022	0.0296635	GGCAGUG	ENSMUST00000161448.1|Zfp316|ENSMUSG00000046658.10|zinc finger protein 316
mm10_v2_chr2_+_10372426_10372497	0.0293664	GGCAGUG	ENSMUST00000114864.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000116594.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000041105.6|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2
mm10_v2_chrX_-_12673540_12673668	0.02825	GGCAGUG	ENSMUST00000060108.6|1810030O07Rik|ENSMUSG00000044148.6|RIKEN cDNA 1810030O07 gene
mm10_v2_chr16_-_5203981_5204017	0.027559	GGCAGUG	ENSMUST00000147567.1|Nagpa|ENSMUSG00000023143.4|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 	ENSMUST00000023911.4|Nagpa|ENSMUSG00000023143.4|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
mm10_v2_chr1_-_166002591_166002609	0.0266766	GGCAGUG	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr14_+_20294690_20294745	0.0257644	GGCAGUG	ENSMUST00000022343.4|Nudt13|ENSMUSG00000021809.9|nudix (nucleoside diphosphate linked moiety X)-type motif 13
mm10_v2_chr11_+_95414078_95414243	0.0255119	GGCAGUG	ENSMUST00000107724.2|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000150884.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000107722.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000127713.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein
mm10_v2_chr10_-_111010001_111010066	0.0250799	GGCAGUG	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr15_+_80711292_80711340	0.0241623	GGCAGUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr17_-_23645264_23645309	0.0239638	GGCAGUG	ENSMUST00000024696.7|Mmp25|ENSMUSG00000023903.7|matrix metallopeptidase 25
mm10_v2_chr4_-_127354074_127354086	0.023801	GGCAGUG	ENSMUST00000106090.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4 	ENSMUST00000060419.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4
mm10_v2_chr12_+_112722163_112722239	0.0236436	GGCAGUG	ENSMUST00000101018.3|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B 	ENSMUST00000179041.1|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B 	ENSMUST00000092279.6|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B
mm10_v2_chr1_+_59516264_59516264	0.0234171	GGCAGUG	ENSMUST00000114243.1|Gm973|ENSMUSG00000047361.9|predicted gene 973
mm10_v2_chr19_-_5663701_5663710	0.0221204	GGCAGUG	ENSMUST00000071857.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000080824.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000164304.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000169854.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1
mm10_v2_chr10_+_128411616_128411676	0.0221159	GGCAGUG	ENSMUST00000096386.5|Rnf41|ENSMUSG00000025373.7|ring finger protein 41 	ENSMUST00000171342.1|Rnf41|ENSMUSG00000025373.7|ring finger protein 41
mm10_v2_chr12_+_75308308_75308322	0.0212145	GGCAGUG	ENSMUST00000118602.1|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J 	ENSMUST00000118966.1|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J 	ENSMUST00000055390.5|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J
mm10_v2_chr10_+_69533761_69533776	0.0211362	GGCAGUG	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr10_+_94514825_94514922	0.0195619	GGCAGUG	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr3_+_38886940_38886940	0.0194939	GGCAGUG	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr7_-_38227975_38228000	0.018345	GGCAGUG	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr7_-_119720742_119720803	0.0172981	GGCAGUG	ENSMUST00000033236.7|Thumpd1|ENSMUSG00000030942.7|THUMP domain containing 1
mm10_v2_chr17_+_46383725_46383792	0.0171087	GGCAGUG	ENSMUST00000113481.1|Zfp318|ENSMUSG00000015597.10|zinc finger protein 318 	ENSMUST00000138127.1|Zfp318|ENSMUSG00000015597.10|zinc finger protein 318
mm10_v2_chr3_+_131110350_131110471	0.016235	GGCAGUG	ENSMUST00000066849.6|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000106341.2|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000029611.7|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chr4_-_130359915_130359966	0.0158374	GGCAGUG	ENSMUST00000134159.2|Zcchc17|ENSMUSG00000028772.13|zinc finger, CCHC domain containing 17
mm10_v2_chr12_-_85097080_85097091	0.0145146	GGCAGUG	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr3_+_132684106_132684145	0.013414	GGCAGUG	ENSMUST00000169172.1|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase 	ENSMUST00000029664.6|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase
mm10_v2_chr12_+_108792946_108792988	0.0111751	GGCAGUG	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr8_+_55940453_55940509	0.0093548	GGCAGUG	ENSMUST00000000275.7|Glra3|ENSMUSG00000038257.8|glycine receptor, alpha 3 subunit
mm10_v2_chr19_-_4928241_4928287	0.00851167	GGCAGUG	ENSMUST00000025851.3|Dpp3|ENSMUSG00000063904.3|dipeptidylpeptidase 3
mm10_v2_chr1_-_105356658_105356714	0.00668399	GGCAGUG	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr19_+_4711153_4711258	0.00654662	GGCAGUG	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr16_-_26989974_26989974	0.00627648	GGCAGUG	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr2_-_127143410_127143479	0.00564787	GGCAGUG	ENSMUST00000132773.1|Itpripl1|ENSMUSG00000074825.4|inositol 1,4,5-triphosphate receptor interacting protein-like 1
mm10_v2_chr1_-_133753681_133753857	0.00552619	GGCAGUG	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr1_-_151428440_151428474	0.0039945	GGCAGUG	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr8_+_95352258_95352329	0.00095472	GGCAGUG	ENSMUST00000034243.5|Mmp15|ENSMUSG00000031790.7|matrix metallopeptidase 15
