mm10_v2_chr14_+_45351473_45351473	1.01596	GUAAACA	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr8_+_126298526_126298594	0.960061	GUAAACA	ENSMUST00000108759.2|Slc35f3|ENSMUSG00000057060.7|solute carrier family 35, member F3
mm10_v2_chr6_+_103510874_103510898	0.957783	GUAAACA	ENSMUST00000066905.6|Chl1|ENSMUSG00000030077.9|cell adhesion molecule with homology to L1CAM
mm10_v2_chr19_+_38930909_38930920	0.940689	GUAAACA	ENSMUST00000025965.5|Hells|ENSMUSG00000025001.5|helicase, lymphoid specific
mm10_v2_chr7_-_62420139_62420157	0.90631	GUAAACA	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr4_+_17853451_17853474	0.790822	GUAAACA	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr14_-_55116935_55116980	0.768485	GUAAACA	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr3_-_89322883_89322965	0.733189	GUAAACA	ENSMUST00000029673.5|Efna3|ENSMUSG00000028039.7|ephrin A3
mm10_v2_chr15_-_98881255_98881404	0.688079	GUAAACA	ENSMUST00000024518.9|Rhebl1|ENSMUSG00000023755.9|Ras homolog enriched in brain like 1
mm10_v2_chr8_+_117157972_117158137	0.685453	GUAAACA	ENSMUST00000064488.4|Gan|ENSMUSG00000052557.5|giant axonal neuropathy 	ENSMUST00000162997.1|Gan|ENSMUSG00000052557.5|giant axonal neuropathy
mm10_v2_chr19_+_41482632_41482688	0.681957	GUAAACA	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr13_+_30749226_30749247	0.648668	GUAAACA	ENSMUST00000021784.2|Irf4|ENSMUSG00000021356.3|interferon regulatory factor 4 	ENSMUST00000110307.1|Irf4|ENSMUSG00000021356.3|interferon regulatory factor 4
mm10_v2_chr12_-_112929415_112929495	0.639019	GUAAACA	ENSMUST00000075827.3|Jag2|ENSMUSG00000002799.5|jagged 2
mm10_v2_chr18_-_61400363_61400449	0.622552	GUAAACA	ENSMUST00000063307.5|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta 	ENSMUST00000075299.6|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm10_v2_chr3_-_33082004_33082068	0.622037	GUAAACA	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chrX_+_137049586_137049654	0.621578	GUAAACA	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr5_-_20882072_20882124	0.612434	GUAAACA	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr2_+_22895482_22895522	0.611332	GUAAACA	ENSMUST00000053729.7|Pdss1|ENSMUSG00000026784.8|prenyl (solanesyl) diphosphate synthase, subunit 1
mm10_v2_chr4_+_11156411_11156453	0.587373	GUAAACA	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr3_-_51560816_51560878	0.559801	GUAAACA	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr12_-_54986328_54986342	0.559426	GUAAACA	ENSMUST00000038926.6|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A
mm10_v2_chr8_+_13339656_13339674	0.556237	GUAAACA	ENSMUST00000170909.1|Tfdp1|ENSMUSG00000038482.10|transcription factor Dp 1
mm10_v2_chr9_+_72532214_72532271	0.510512	GUAAACA	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr12_-_34528844_34528904	0.506149	GUAAACA	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr12_-_102704896_102704980	0.505189	GUAAACA	ENSMUST00000178697.1|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase 	ENSMUST00000046518.5|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase
mm10_v2_chr15_-_79687776_79687894	0.493565	GUAAACA	ENSMUST00000023061.5|Josd1|ENSMUSG00000022426.5|Josephin domain containing 1
mm10_v2_chr2_-_65567465_65567495	0.472646	GUAAACA	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr5_+_121397936_121398004	0.463437	GUAAACA	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr2_+_107290590_107290660	0.449869	GUAAACA	ENSMUST00000037012.2|Kcna4|ENSMUSG00000042604.5|potassium voltage-gated channel, shaker-related subfamily, member 4
mm10_v2_chr2_+_65620829_65620857	0.448869	GUAAACA	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr18_+_14783238_14783259	0.443585	GUAAACA	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_+_163054682_163054693	0.441285	GUAAACA	ENSMUST00000018005.3|Mybl2|ENSMUSG00000017861.5|myeloblastosis oncogene-like 2
mm10_v2_chr14_+_27622433_27622543	0.438973	GUAAACA	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr19_+_18670780_18670810	0.436936	GUAAACA	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr17_+_83350925_83350998	0.434465	GUAAACA	ENSMUST00000096766.4|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4 	ENSMUST00000112363.2|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4 	ENSMUST00000049503.8|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4
mm10_v2_chr12_+_12262139_12262157	0.4268	GUAAACA	ENSMUST00000069066.6|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A 	ENSMUST00000069005.8|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A
mm10_v2_chr10_-_68278713_68278735	0.422564	GUAAACA	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr19_-_37330613_37330613	0.420572	GUAAACA	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr10_-_53379816_53379858	0.419432	GUAAACA	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr6_+_120666388_120666424	0.417879	GUAAACA	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr18_-_43687695_43687773	0.408229	GUAAACA	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr6_-_72439549_72439564	0.401647	GUAAACA	ENSMUST00000059472.8|Mat2a|ENSMUSG00000053907.9|methionine adenosyltransferase II, alpha
mm10_v2_chr13_-_28953690_28953713	0.393692	GUAAACA	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr12_-_64965496_64965538	0.390453	GUAAACA	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr4_-_91372028_91372069	0.389201	GUAAACA	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr10_+_108162358_108162408	0.384811	GUAAACA	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr1_+_130717320_130717333	0.382874	GUAAACA	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr5_+_76840597_76840637	0.375639	GUAAACA	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr13_-_100552442_100552498	0.372747	GUAAACA	ENSMUST00000159515.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000160859.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000069756.4|Ocln|ENSMUSG00000021638.6|occludin
mm10_v2_chr1_+_187997821_187997834	0.367438	GUAAACA	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr4_-_99120898_99120935	0.364955	GUAAACA	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr5_-_25498702_25498745	0.358768	GUAAACA	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr2_+_55437100_55437182	0.354687	GUAAACA	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr10_+_110745433_110745572	0.354065	GUAAACA	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr12_+_4917376_4917438	0.353748	GUAAACA	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr8_-_95888510_95888547	0.34515	GUAAACA	ENSMUST00000034097.7|Got2|ENSMUSG00000031672.7|glutamate oxaloacetate transaminase 2, mitochondrial
mm10_v2_chr5_-_124249758_124249782	0.343802	GUAAACA	ENSMUST00000162812.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr8_+_106168857_106168926	0.34348	GUAAACA	ENSMUST00000034378.3|Slc7a6|ENSMUSG00000031904.4|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm10_v2_chr3_-_100685431_100685503	0.342882	GUAAACA	ENSMUST00000008907.7|Man1a2|ENSMUSG00000008763.10|mannosidase, alpha, class 1A, member 2
mm10_v2_chr16_+_57121705_57121761	0.34222	GUAAACA	ENSMUST00000166897.1|Tomm70a|ENSMUSG00000022752.8|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm10_v2_chr11_-_90390895_90390926	0.337203	GUAAACA	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr17_+_26414820_26414965	0.334752	GUAAACA	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr10_+_50592669_50592739	0.334092	GUAAACA	ENSMUST00000035606.8|Ascc3|ENSMUSG00000038774.8|activating signal cointegrator 1 complex subunit 3
mm10_v2_chr7_-_57509995_57510056	0.331571	GUAAACA	ENSMUST00000068456.6|Gabra5|ENSMUSG00000055078.6|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
mm10_v2_chr13_-_100104064_100104082	0.328959	GUAAACA	ENSMUST00000038104.5|Bdp1|ENSMUSG00000049658.7|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm10_v2_chr3_+_79591356_79591430	0.326713	GUAAACA	ENSMUST00000029382.7|Ppid|ENSMUSG00000027804.7|peptidylprolyl isomerase D (cyclophilin D)
mm10_v2_chr18_+_22345089_22345089	0.325501	GUAAACA	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr2_-_126876209_126876267	0.321796	GUAAACA	ENSMUST00000103224.3|Trpm7|ENSMUSG00000027365.8|transient receptor potential cation channel, subfamily M, member 7
mm10_v2_chr3_+_89520152_89520175	0.321244	GUAAACA	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr4_+_140700487_140700541	0.317807	GUAAACA	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr15_-_97055942_97055964	0.313807	GUAAACA	ENSMUST00000023101.3|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr18_+_3383223_3383263	0.309548	GUAAACA	ENSMUST00000162301.1|Cul2|ENSMUSG00000024231.8|cullin 2 	ENSMUST00000161317.1|Cul2|ENSMUSG00000024231.8|cullin 2
mm10_v2_chr1_+_156558844_156559049	0.309128	GUAAACA	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr10_+_51677756_51677789	0.308751	GUAAACA	ENSMUST00000122922.1|Rfx6|ENSMUSG00000019900.11|regulatory factor X, 6
mm10_v2_chr11_+_23256001_23256105	0.307386	GUAAACA	ENSMUST00000020538.6|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000109551.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102870.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102869.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr9_+_44066993_44067024	0.304709	GUAAACA	ENSMUST00000034508.7|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr13_+_16014457_16014475	0.303615	GUAAACA	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr6_-_38876163_38876234	0.303582	GUAAACA	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr4_+_48585135_48585187	0.30327	GUAAACA	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr17_-_12769605_12769700	0.30217	GUAAACA	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr9_+_108826320_108826320	0.297111	GUAAACA	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr1_+_191717834_191717904	0.290194	GUAAACA	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr1_-_38129618_38129679	0.288275	GUAAACA	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr7_+_30121915_30122001	0.287856	GUAAACA	ENSMUST00000098596.3|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382 	ENSMUST00000153792.1|Zfp382|ENSMUSG00000074220.3|zinc finger protein 382
mm10_v2_chr9_-_85327110_85327128	0.286986	GUAAACA	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr10_-_123196916_123196961	0.281208	GUAAACA	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr6_-_131388417_131388464	0.280932	GUAAACA	ENSMUST00000032309.6|Ybx3|ENSMUSG00000030189.9|Y box protein 3 	ENSMUST00000087865.2|Ybx3|ENSMUSG00000030189.9|Y box protein 3
mm10_v2_chr19_-_30175414_30175436	0.279866	GUAAACA	ENSMUST00000025778.7|Gldc|ENSMUSG00000024827.9|glycine decarboxylase
mm10_v2_chr17_+_47630690_47630690	0.279523	GUAAACA	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr4_+_11191726_11191789	0.277789	GUAAACA	ENSMUST00000029866.9|Ccne2|ENSMUSG00000028212.10|cyclin E2 	ENSMUST00000108324.3|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr17_+_27856443_27856511	0.27591	GUAAACA	ENSMUST00000114849.1|Uhrf1bp1|ENSMUSG00000039512.11|UHRF1 (ICBP90) binding protein 1
mm10_v2_chr9_+_72662346_72662412	0.273295	GUAAACA	ENSMUST00000034740.8|Nedd4|ENSMUSG00000032216.8|neural precursor cell expressed, developmentally down-regulated 4
mm10_v2_chrX_-_95444789_95444872	0.268166	GUAAACA	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chrX_+_36328353_36328418	0.266746	GUAAACA	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr13_+_106947104_106947164	0.263825	GUAAACA	ENSMUST00000022203.8|Dimt1|ENSMUSG00000021692.8|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
mm10_v2_chr1_+_139422196_139422383	0.262198	GUAAACA	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr4_-_148130678_148130706	0.262178	GUAAACA	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr7_-_98178254_98178274	0.261499	GUAAACA	ENSMUST00000040971.7|Capn5|ENSMUSG00000035547.8|calpain 5
mm10_v2_chr9_+_74953053_74953091	0.257062	GUAAACA	ENSMUST00000170846.1|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr1_-_58504946_58505109	0.256066	GUAAACA	ENSMUST00000027198.5|Orc2|ENSMUSG00000026037.8|origin recognition complex, subunit 2
mm10_v2_chr13_+_55635002_55635036	0.256012	GUAAACA	ENSMUST00000172272.1|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENSMUST00000099479.3|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm10_v2_chr2_+_5845017_5845062	0.254032	GUAAACA	ENSMUST00000026927.3|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENSMUST00000179748.1|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm10_v2_chr4_-_105109829_105109913	0.25282	GUAAACA	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chrX_+_110814390_110814413	0.249412	GUAAACA	ENSMUST00000078229.3|Pou3f4|ENSMUSG00000056854.3|POU domain, class 3, transcription factor 4
mm10_v2_chr1_-_176807124_176807124	0.248944	GUAAACA	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr9_+_77754526_77754541	0.248734	GUAAACA	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chr1_+_15712303_15712303	0.24674	GUAAACA	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr11_-_49712674_49712726	0.246376	GUAAACA	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr14_+_84443553_84443568	0.246079	GUAAACA	ENSMUST00000071370.5|Pcdh17|ENSMUSG00000035566.6|protocadherin 17
mm10_v2_chr6_+_56714891_56714951	0.245457	GUAAACA	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr8_-_73353477_73353551	0.24447	GUAAACA	ENSMUST00000119826.1|Large|ENSMUSG00000004383.11|like-glycosyltransferase
mm10_v2_chr14_+_27238018_27238046	0.241917	GUAAACA	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr18_+_11052487_11052510	0.239697	GUAAACA	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr4_-_56947411_56947447	0.239694	GUAAACA	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr14_-_100149764_100149764	0.23782	GUAAACA	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr5_-_53213447_53213473	0.233716	GUAAACA	ENSMUST00000031090.6|Sel1l3|ENSMUSG00000029189.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm10_v2_chr10_+_84576626_84576626	0.233649	GUAAACA	ENSMUST00000020223.7|Tcp11l2|ENSMUSG00000020034.7|t-complex 11 (mouse) like 2
mm10_v2_chr2_-_28840274_28840360	0.231123	GUAAACA	ENSMUST00000037117.5|Gtf3c4|ENSMUSG00000035666.8|general transcription factor IIIC, polypeptide 4 	ENSMUST00000171404.1|Gtf3c4|ENSMUSG00000035666.8|general transcription factor IIIC, polypeptide 4
mm10_v2_chr18_-_64660981_64661010	0.231119	GUAAACA	ENSMUST00000025482.8|Atp8b1|ENSMUSG00000039529.8|ATPase, class I, type 8B, member 1
mm10_v2_chr14_+_30951486_30951510	0.229927	GUAAACA	ENSMUST00000050171.8|Nek4|ENSMUSG00000021918.9|NIMA (never in mitosis gene a)-related expressed kinase 4
mm10_v2_chr12_-_118301429_118301458	0.229761	GUAAACA	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr10_+_128377086_128377155	0.2247	GUAAACA	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr18_-_10030017_10030146	0.22438	GUAAACA	ENSMUST00000116669.1|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14 	ENSMUST00000092096.6|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14
mm10_v2_chr18_+_24709436_24709447	0.224244	GUAAACA	ENSMUST00000037097.7|Fhod3|ENSMUSG00000034295.9|formin homology 2 domain containing 3
mm10_v2_chr9_+_65908967_65909020	0.223517	GUAAACA	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr4_-_82859571_82859679	0.223176	GUAAACA	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr6_-_24956106_24956131	0.223147	GUAAACA	ENSMUST00000127247.2|Tmem229a|ENSMUSG00000048022.10|transmembrane protein 229A
mm10_v2_chr2_+_152226839_152226908	0.221589	GUAAACA	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr3_-_138143352_138143396	0.220484	GUAAACA	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr9_+_26733728_26733824	0.218748	GUAAACA	ENSMUST00000160899.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENSMUST00000161431.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENSMUST00000159799.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
mm10_v2_chr15_-_73184840_73184971	0.217805	GUAAACA	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr10_-_22731336_22731447	0.217218	GUAAACA	ENSMUST00000127698.1|Tbpl1|ENSMUSG00000071359.7|TATA box binding protein-like 1
mm10_v2_chr10_+_39732099_39732140	0.213061	GUAAACA	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr16_-_94997653_94997704	0.21283	GUAAACA	ENSMUST00000095873.4|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6 	ENSMUST00000099508.2|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6
mm10_v2_chr8_+_104591464_104591505	0.211596	GUAAACA	ENSMUST00000059588.6|Pdp2|ENSMUSG00000048371.7|pyruvate dehyrogenase phosphatase catalytic subunit 2
mm10_v2_chr3_-_80802789_80802840	0.211276	GUAAACA	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr5_-_121836852_121836880	0.210212	GUAAACA	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr18_-_20746402_20746422	0.209381	GUAAACA	ENSMUST00000070080.5|B4galt6|ENSMUSG00000056124.5|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6
mm10_v2_chr7_+_120917744_120917815	0.208696	GUAAACA	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr3_+_146404631_146404738	0.207721	GUAAACA	ENSMUST00000106153.2|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000039021.4|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000106151.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000149262.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein
mm10_v2_chr10_+_83543941_83544007	0.201974	GUAAACA	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr3_+_53463666_53463681	0.201927	GUAAACA	ENSMUST00000058577.4|Proser1|ENSMUSG00000049504.11|proline and serine rich 1
mm10_v2_chr9_+_88327592_88327622	0.198669	GUAAACA	ENSMUST00000034992.6|Nt5e|ENSMUSG00000032420.6|5' nucleotidase, ecto
mm10_v2_chr15_-_96642883_96642984	0.196615	GUAAACA	ENSMUST00000088452.4|Slc38a1|ENSMUSG00000023169.8|solute carrier family 38, member 1
mm10_v2_chr5_+_65763518_65763541	0.195433	GUAAACA	ENSMUST00000113738.1|N4bp2|ENSMUSG00000037795.8|NEDD4 binding protein 2
mm10_v2_chr1_-_95667555_95667597	0.194243	GUAAACA	ENSMUST00000043336.4|St8sia4|ENSMUSG00000040710.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm10_v2_chr1_+_87326997_87327006	0.19358	GUAAACA	ENSMUST00000027475.8|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr3_+_31095052_31095125	0.193053	GUAAACA	ENSMUST00000118470.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000029194.5|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000123532.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000117728.1|Skil|ENSMUSG00000027660.10|SKI-like
mm10_v2_chr12_-_102878406_102878449	0.192963	GUAAACA	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr16_-_46010212_46010223	0.192067	GUAAACA	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr5_-_90366176_90366192	0.191917	GUAAACA	ENSMUST00000014421.8|Ankrd17|ENSMUSG00000055204.8|ankyrin repeat domain 17 	ENSMUST00000081914.6|Ankrd17|ENSMUSG00000055204.8|ankyrin repeat domain 17 	ENSMUST00000168058.2|Ankrd17|ENSMUSG00000055204.8|ankyrin repeat domain 17
mm10_v2_chr9_+_31030621_31030700	0.190704	GUAAACA	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr15_+_58415456_58415512	0.189387	GUAAACA	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr2_+_178414512_178414591	0.187154	GUAAACA	ENSMUST00000094251.4|Fam217b|ENSMUSG00000070476.4|family with sequence similarity 217, member B
mm10_v2_chr1_-_30949756_30949770	0.186683	GUAAACA	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr7_-_127021205_127021216	0.186549	GUAAACA	ENSMUST00000159916.1|Prrt2|ENSMUSG00000045114.7|proline-rich transmembrane protein 2
mm10_v2_chr11_-_75348261_75348324	0.18638	GUAAACA	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chrX_-_104413825_104413856	0.185047	GUAAACA	ENSMUST00000033695.5|Abcb7|ENSMUSG00000031333.7|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm10_v2_chr8_-_47352348_47352367	0.184327	GUAAACA	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr4_+_21776261_21776297	0.183967	GUAAACA	ENSMUST00000065111.8|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000040429.5|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000148304.1|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45
mm10_v2_chr16_+_11322876_11322911	0.182601	GUAAACA	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr10_+_82629803_82629859	0.181717	GUAAACA	ENSMUST00000092266.4|Tdg|ENSMUSG00000034674.12|thymine DNA glycosylase 	ENSMUST00000151390.1|Tdg|ENSMUSG00000034674.12|thymine DNA glycosylase
mm10_v2_chr9_-_75559604_75559665	0.179444	GUAAACA	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr16_-_76373827_76373852	0.178307	GUAAACA	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr10_-_18743691_18743760	0.177973	GUAAACA	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr15_-_98871175_98871204	0.177768	GUAAACA	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr11_+_23665615_23665697	0.176692	GUAAACA	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr3_-_157925056_157925077	0.176383	GUAAACA	ENSMUST00000118539.1|Cth|ENSMUSG00000028179.11|cystathionase (cystathionine gamma-lyase)
mm10_v2_chr15_-_9140374_9140451	0.175961	GUAAACA	ENSMUST00000096482.3|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45) 	ENSMUST00000110585.2|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45)
mm10_v2_chr3_+_22076644_22076681	0.174394	GUAAACA	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr12_+_16894894_16894978	0.173558	GUAAACA	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr13_+_91461050_91461125	0.172521	GUAAACA	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr12_+_65036319_65036358	0.171525	GUAAACA	ENSMUST00000120580.1|Prpf39|ENSMUSG00000035597.12|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm10_v2_chr2_+_121955964_121956001	0.170649	GUAAACA	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr2_-_51149100_51149115	0.170606	GUAAACA	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr4_-_134018829_134018841	0.170144	GUAAACA	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr7_-_63938862_63938933	0.169523	GUAAACA	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr11_+_77686155_77686179	0.169269	GUAAACA	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr9_+_75071148_75071228	0.168472	GUAAACA	ENSMUST00000123128.1|Myo5a|ENSMUSG00000034593.10|myosin VA
mm10_v2_chr16_+_32914094_32914142	0.167336	GUAAACA	ENSMUST00000023491.6|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170899.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000171118.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170201.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000165616.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000135193.2|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3
mm10_v2_chr3_-_26133734_26133734	0.165186	GUAAACA	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr7_+_67952817_67952859	0.164777	GUAAACA	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr1_-_155417283_155417323	0.164094	GUAAACA	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr18_-_54990124_54990180	0.16384	GUAAACA	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr2_-_73529725_73529736	0.160259	GUAAACA	ENSMUST00000094681.4|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr16_+_7069825_7069846	0.158978	GUAAACA	ENSMUST00000056416.7|Rbfox1|ENSMUSG00000008658.9|RNA binding protein, fox-1 homolog (C. elegans) 1
mm10_v2_chr3_+_87930256_87930350	0.158449	GUAAACA	ENSMUST00000055984.6|Isg20l2|ENSMUSG00000048039.8|interferon stimulated exonuclease gene 20-like 2
mm10_v2_chr2_+_148681023_148681197	0.157541	GUAAACA	ENSMUST00000028928.7|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr14_+_48120841_48120869	0.157529	GUAAACA	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr3_+_136670076_136670186	0.156907	GUAAACA	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr17_-_80207299_80207308	0.153386	GUAAACA	ENSMUST00000063417.9|Srsf7|ENSMUSG00000024097.10|serine/arginine-rich splicing factor 7
mm10_v2_chr5_+_123142187_123142229	0.15295	GUAAACA	ENSMUST00000174836.1|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B 	ENSMUST00000163030.2|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B
mm10_v2_chr3_+_9250602_9250602	0.150958	GUAAACA	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr15_-_50889691_50889714	0.15093	GUAAACA	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr11_-_98149551_98149621	0.149801	GUAAACA	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chrX_-_95956890_95956918	0.148931	GUAAACA	ENSMUST00000079987.6|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae) 	ENSMUST00000113864.2|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae)
mm10_v2_chr2_-_3475027_3475086	0.147509	GUAAACA	ENSMUST00000027956.2|Suv39h2|ENSMUSG00000026646.10|suppressor of variegation 3-9 homolog 2 (Drosophila)
mm10_v2_chr13_+_13590402_13590456	0.14721	GUAAACA	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr11_-_88718223_88718294	0.14693	GUAAACA	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr10_+_71347736_71347763	0.14628	GUAAACA	ENSMUST00000079252.6|Ipmk|ENSMUSG00000060733.7|inositol polyphosphate multikinase
mm10_v2_chr3_+_103102604_103102711	0.146081	GUAAACA	ENSMUST00000173206.1|Dennd2c|ENSMUSG00000007379.9|DENN/MADD domain containing 2C
mm10_v2_chr12_-_59011996_59012034	0.145677	GUAAACA	ENSMUST00000021375.5|Sec23a|ENSMUSG00000020986.7|SEC23A (S. cerevisiae)
mm10_v2_chr14_+_120275669_120275714	0.145479	GUAAACA	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr4_-_141538434_141538525	0.14448	GUAAACA	ENSMUST00000078886.3|Spen|ENSMUSG00000040761.10|SPEN homolog, transcriptional regulator (Drosophila)
mm10_v2_chr19_-_44069736_44069787	0.144188	GUAAACA	ENSMUST00000172041.1|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000071698.6|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000112028.3|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1
mm10_v2_chr12_-_108003594_108003613	0.143954	GUAAACA	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr2_-_66410064_66410134	0.142802	GUAAACA	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr11_-_84525514_84525542	0.141722	GUAAACA	ENSMUST00000018842.7|Lhx1|ENSMUSG00000018698.9|LIM homeobox protein 1
mm10_v2_chr12_+_111574491_111574542	0.141122	GUAAACA	ENSMUST00000084953.5|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3 	ENSMUST00000075281.6|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3
mm10_v2_chrX_-_51018011_51018032	0.140179	GUAAACA	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr16_+_20097554_20097596	0.140031	GUAAACA	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr7_-_35802968_35803007	0.138162	GUAAACA	ENSMUST00000061586.4|Zfp507|ENSMUSG00000044452.4|zinc finger protein 507
mm10_v2_chr7_+_120173847_120173893	0.137659	GUAAACA	ENSMUST00000033201.5|Anks4b|ENSMUSG00000030909.5|ankyrin repeat and sterile alpha motif domain containing 4B
mm10_v2_chr15_-_89315253_89315312	0.137458	GUAAACA	ENSMUST00000144585.2|Sbf1|ENSMUSG00000036529.11|SET binding factor 1 	ENSMUST00000123791.1|Sbf1|ENSMUSG00000036529.11|SET binding factor 1
mm10_v2_chr19_+_36926071_36926177	0.137303	GUAAACA	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chrX_+_20425688_20425762	0.137191	GUAAACA	ENSMUST00000115384.2|Phf16|ENSMUSG00000037315.8|PHD finger protein 16
mm10_v2_chr17_+_74338943_74338987	0.136466	GUAAACA	ENSMUST00000024869.6|Spast|ENSMUSG00000024068.6|spastin
mm10_v2_chr5_+_13399309_13399382	0.136197	GUAAACA	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr8_-_107588392_107588482	0.135354	GUAAACA	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr16_+_8513429_8513497	0.135318	GUAAACA	ENSMUST00000065987.7|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115838.1|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115839.2|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase
mm10_v2_chr3_+_34020075_34020082	0.134728	GUAAACA	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr13_-_98891036_98891063	0.134214	GUAAACA	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr18_-_39490649_39490717	0.13318	GUAAACA	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr19_-_29805989_29806009	0.132893	GUAAACA	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr5_+_108461222_108461241	0.132413	GUAAACA	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr2_-_103797617_103797662	0.132346	GUAAACA	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr6_+_4903298_4903346	0.128501	GUAAACA	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr10_-_45470201_45470260	0.127576	GUAAACA	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr15_-_64312636_64312692	0.127059	GUAAACA	ENSMUST00000177083.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000177371.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr2_+_127008711_127008756	0.12683	GUAAACA	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chrX_-_108834303_108834381	0.125671	GUAAACA	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr4_+_24973419_24973419	0.12501	GUAAACA	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr11_+_77216180_77216287	0.124822	GUAAACA	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr2_-_25983236_25983290	0.124616	GUAAACA	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr1_-_74544275_74544307	0.124403	GUAAACA	ENSMUST00000044260.4|Usp37|ENSMUSG00000033364.7|ubiquitin specific peptidase 37
mm10_v2_chr1_+_128103297_128103311	0.124311	GUAAACA	ENSMUST00000036288.4|R3hdm1|ENSMUSG00000056211.7|R3H domain containing 1
mm10_v2_chr6_-_134566913_134566995	0.123982	GUAAACA	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr11_-_97744659_97744774	0.123151	GUAAACA	ENSMUST00000018691.8|Pip4k2b|ENSMUSG00000018547.8|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm10_v2_chr11_+_98203059_98203059	0.122966	GUAAACA	ENSMUST00000107539.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr2_+_112379204_112379253	0.122844	GUAAACA	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr2_-_152398046_152398076	0.122785	GUAAACA	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr3_-_10440054_10440127	0.121066	GUAAACA	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr8_-_104395765_104395858	0.120976	GUAAACA	ENSMUST00000179802.1|Cmtm4|ENSMUSG00000096188.1|CKLF-like MARVEL transmembrane domain containing 4
mm10_v2_chr3_+_146220955_146221009	0.120814	GUAAACA	ENSMUST00000039164.2|Lpar3|ENSMUSG00000036832.4|lysophosphatidic acid receptor 3
mm10_v2_chr7_+_123214808_123214853	0.120423	GUAAACA	ENSMUST00000033035.6|Slc5a11|ENSMUSG00000030769.9|solute carrier family 5 (sodium/glucose cotransporter), member 11
mm10_v2_chr1_+_105990384_105990498	0.120013	GUAAACA	ENSMUST00000119166.1|Zcchc2|ENSMUSG00000038866.9|zinc finger, CCHC domain containing 2
mm10_v2_chr7_+_126272589_126272619	0.119829	GUAAACA	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr3_+_103279293_103279293	0.119814	GUAAACA	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr3_-_100489324_100489354	0.118818	GUAAACA	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
mm10_v2_chr5_-_99252839_99252927	0.118739	GUAAACA	ENSMUST00000168092.1|Rasgef1b|ENSMUSG00000029333.8|RasGEF domain family, member 1B 	ENSMUST00000031276.8|Rasgef1b|ENSMUSG00000029333.8|RasGEF domain family, member 1B
mm10_v2_chr6_-_89362581_89362637	0.118668	GUAAACA	ENSMUST00000163139.1|Plxna1|ENSMUSG00000030084.5|plexin A1
mm10_v2_chr2_+_153741274_153741294	0.118379	GUAAACA	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr6_-_40436104_40436151	0.117853	GUAAACA	ENSMUST00000039008.6|E330009J07Rik|ENSMUSG00000037172.8|RIKEN cDNA E330009J07 gene 	ENSMUST00000101492.3|E330009J07Rik|ENSMUSG00000037172.8|RIKEN cDNA E330009J07 gene
mm10_v2_chr12_+_85746539_85746551	0.117731	GUAAACA	ENSMUST00000040461.3|Mfsd7c|ENSMUSG00000034258.3|major facilitator superfamily domain containing 7C
mm10_v2_chr13_-_117025505_117025541	0.1173	GUAAACA	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr8_-_104631312_104631321	0.116917	GUAAACA	ENSMUST00000034351.6|Rrad|ENSMUSG00000031880.6|Ras-related associated with diabetes
mm10_v2_chr5_-_128953303_128953362	0.116487	GUAAACA	ENSMUST00000111346.1|Rimbp2|ENSMUSG00000029420.8|RIMS binding protein 2
mm10_v2_chr13_+_75707484_75707510	0.116399	GUAAACA	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr8_-_121652895_121652913	0.116327	GUAAACA	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr15_+_80711292_80711340	0.116308	GUAAACA	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr5_+_103425181_103425197	0.11589	GUAAACA	ENSMUST00000048957.9|Ptpn13|ENSMUSG00000034573.10|protein tyrosine phosphatase, non-receptor type 13
mm10_v2_chr3_+_146852359_146852438	0.115079	GUAAACA	ENSMUST00000038090.5|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7 	ENSMUST00000170055.1|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7
mm10_v2_chrX_-_157598656_157598715	0.114128	GUAAACA	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr11_+_72607221_72607307	0.113764	GUAAACA	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr9_+_78113275_78113346	0.112644	GUAAACA	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chr12_+_3807017_3807063	0.111551	GUAAACA	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr2_-_33431324_33431324	0.111201	GUAAACA	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr9_-_104262900_104262949	0.110887	GUAAACA	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr10_-_62880014_62880014	0.109297	GUAAACA	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr8_-_115707778_115707794	0.108456	GUAAACA	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr10_+_95940663_95940703	0.107333	GUAAACA	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr9_+_72806874_72806874	0.107175	GUAAACA	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr17_+_30901811_30901867	0.106752	GUAAACA	ENSMUST00000114574.1|Glp1r|ENSMUSG00000024027.7|glucagon-like peptide 1 receptor
mm10_v2_chr1_+_39900883_39900963	0.105515	GUAAACA	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr3_-_63851251_63851359	0.104844	GUAAACA	ENSMUST00000162269.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000159676.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000175947.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr2_-_122702615_122702717	0.104386	GUAAACA	ENSMUST00000005952.4|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4 	ENSMUST00000099457.3|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4
mm10_v2_chr4_-_119294520_119294604	0.10406	GUAAACA	ENSMUST00000079644.6|Ybx1|ENSMUSG00000028639.8|Y box protein 1
mm10_v2_chr1_-_106714217_106714330	0.103816	GUAAACA	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr6_+_115134899_115134982	0.103159	GUAAACA	ENSMUST00000009538.5|Syn2|ENSMUSG00000009394.7|synapsin II 	ENSMUST00000169345.1|Syn2|ENSMUSG00000009394.7|synapsin II
mm10_v2_chr17_-_80480435_80480462	0.101864	GUAAACA	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr7_+_131966446_131966469	0.101245	GUAAACA	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr16_+_19760232_19760247	0.100865	GUAAACA	ENSMUST00000079780.3|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 	ENSMUST00000164397.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr9_-_45984816_45984871	0.0999115	GUAAACA	ENSMUST00000172450.1|Pafah1b2|ENSMUSG00000003131.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm10_v2_chr5_-_135934590_135934613	0.0998688	GUAAACA	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr4_+_139574697_139574725	0.0981834	GUAAACA	ENSMUST00000174078.1|Iffo2|ENSMUSG00000041025.9|intermediate filament family orphan 2
mm10_v2_chr15_-_28025834_28025879	0.0981774	GUAAACA	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr10_+_39369750_39369804	0.0977126	GUAAACA	ENSMUST00000063091.6|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000099967.3|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000126486.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr1_-_151428440_151428474	0.0958994	GUAAACA	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr9_-_27030010_27030114	0.0954977	GUAAACA	ENSMUST00000034470.9|Vps26b|ENSMUSG00000031988.9|vacuolar protein sorting 26 homolog B (yeast)
mm10_v2_chr15_-_93275151_93275178	0.0953027	GUAAACA	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr2_-_5895319_5895432	0.0934801	GUAAACA	ENSMUST00000026926.4|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae) 	ENSMUST00000102981.3|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae)
mm10_v2_chr17_-_25274299_25274317	0.0931809	GUAAACA	ENSMUST00000172587.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000049911.9|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000173713.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr1_-_191026181_191026197	0.0928052	GUAAACA	ENSMUST00000085635.4|Mfsd7b|ENSMUSG00000066595.4|major facilitator superfamily domain containing 7B
mm10_v2_chr19_+_22448242_22448283	0.0918914	GUAAACA	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr3_-_117360876_117360876	0.0913842	GUAAACA	ENSMUST00000061071.8|D3Bwg0562e|ENSMUSG00000044667.8|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm10_v2_chr18_+_77938452_77938477	0.0910291	GUAAACA	ENSMUST00000044622.5|Epg5|ENSMUSG00000039840.7|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm10_v2_chr19_+_41593363_41593363	0.0905335	GUAAACA	ENSMUST00000099454.3|AI606181|ENSMUSG00000074873.3|expressed sequence AI606181
mm10_v2_chr18_+_40258361_40258361	0.0904404	GUAAACA	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr6_-_92943485_92943507	0.0904177	GUAAACA	ENSMUST00000113438.1|Adamts9|ENSMUSG00000030022.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm10_v2_chr1_-_83408190_83408222	0.0902064	GUAAACA	ENSMUST00000160953.1|Sphkap|ENSMUSG00000026163.11|SPHK1 interactor, AKAP domain containing
mm10_v2_chr16_+_55973881_55973892	0.0901668	GUAAACA	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr2_-_26503814_26503836	0.0900735	GUAAACA	ENSMUST00000028288.4|Notch1|ENSMUSG00000026923.9|notch 1
mm10_v2_chr8_-_57653023_57653039	0.0881824	GUAAACA	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr9_-_75611308_75611334	0.0878462	GUAAACA	ENSMUST00000064433.3|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr11_+_101316200_101316275	0.0876135	GUAAACA	ENSMUST00000142640.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) 	ENSMUST00000019470.7|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr5_+_29569208_29569267	0.0874917	GUAAACA	ENSMUST00000049453.4|Ube3c|ENSMUSG00000039000.4|ubiquitin protein ligase E3C
mm10_v2_chr5_+_52741569_52741623	0.0864678	GUAAACA	ENSMUST00000031081.4|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta 	ENSMUST00000031082.6|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta
mm10_v2_chr5_+_71699918_71699949	0.0864232	GUAAACA	ENSMUST00000031122.7|Gabrb1|ENSMUSG00000029212.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm10_v2_chr11_+_17159263_17159357	0.0857142	GUAAACA	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr18_+_68300351_68300422	0.0845697	GUAAACA	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chrX_+_85574018_85574150	0.0841378	GUAAACA	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr12_+_113185877_113185937	0.084014	GUAAACA	ENSMUST00000058491.6|Tmem121|ENSMUSG00000049036.6|transmembrane protein 121
mm10_v2_chr5_-_89883321_89883343	0.0835699	GUAAACA	ENSMUST00000163159.1|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 	ENSMUST00000061427.5|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm10_v2_chr18_-_77565050_77565162	0.0829288	GUAAACA	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr1_-_189007829_189007852	0.0816365	GUAAACA	ENSMUST00000085678.2|Kctd3|ENSMUSG00000026608.7|potassium channel tetramerisation domain containing 3
mm10_v2_chrX_-_12080545_12080561	0.0816248	GUAAACA	ENSMUST00000115513.2|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor 	ENSMUST00000115512.2|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor 	ENSMUST00000065143.7|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor 	ENSMUST00000124033.1|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr16_-_15594507_15594531	0.0814919	GUAAACA	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr10_+_81136223_81136271	0.0812822	GUAAACA	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr2_-_153241402_153241426	0.0804816	GUAAACA	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr9_-_82975475_82975493	0.079502	GUAAACA	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr2_-_74578875_74578954	0.079501	GUAAACA	ENSMUST00000134168.1|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000111993.2|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000064503.6|Lnp|ENSMUSG00000009207.9|limb and neural patterns
mm10_v2_chr12_+_103532435_103532565	0.079288	GUAAACA	ENSMUST00000021631.5|Ppp4r4|ENSMUSG00000021209.6|protein phosphatase 4, regulatory subunit 4
mm10_v2_chr11_+_58009064_58009144	0.078915	GUAAACA	ENSMUST00000071487.6|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1 	ENSMUST00000178636.1|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1
mm10_v2_chr2_-_79456750_79456761	0.0785936	GUAAACA	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr14_+_65666394_65666416	0.0784794	GUAAACA	ENSMUST00000022610.8|Scara5|ENSMUSG00000022032.8|scavenger receptor class A, member 5 (putative)
mm10_v2_chr10_+_98915117_98915172	0.07838	GUAAACA	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr2_+_156613664_156613706	0.077177	GUAAACA	ENSMUST00000169464.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000109567.3|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr14_-_30353468_30353535	0.0771766	GUAAACA	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr2_-_57114970_57115038	0.076835	GUAAACA	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr7_+_120677579_120677630	0.0766853	GUAAACA	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr4_+_55350043_55350078	0.0764363	GUAAACA	ENSMUST00000030134.8|Rad23b|ENSMUSG00000028426.10|RAD23b homolog (S. cerevisiae)
mm10_v2_chr1_-_152766281_152766319	0.0762481	GUAAACA	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr16_-_50432340_50432409	0.0760276	GUAAACA	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr8_-_85432841_85432859	0.0759114	GUAAACA	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr3_-_121171678_121171717	0.0754311	GUAAACA	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr7_-_35647441_35647521	0.0754194	GUAAACA	ENSMUST00000118501.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr5_-_123572976_123573031	0.0742635	GUAAACA	ENSMUST00000031388.8|Vps33a|ENSMUSG00000029434.8|vacuolar protein sorting 33A (yeast)
mm10_v2_chr5_-_73647713_73647754	0.0742064	GUAAACA	ENSMUST00000081170.7|Sgcb|ENSMUSG00000029156.10|sarcoglycan, beta (dystrophin-associated glycoprotein)
mm10_v2_chrX_+_52912232_52912361	0.0740808	GUAAACA	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr12_-_27342696_27342726	0.073302	GUAAACA	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr16_+_17451981_17452034	0.0728316	GUAAACA	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr1_-_135585314_135585364	0.0723996	GUAAACA	ENSMUST00000040599.8|Nav1|ENSMUSG00000009418.9|neuron navigator 1 	ENSMUST00000067414.6|Nav1|ENSMUSG00000009418.9|neuron navigator 1
mm10_v2_chr17_+_34670535_34670535	0.0720172	GUAAACA	ENSMUST00000168533.1|Tnxb|ENSMUSG00000033327.10|tenascin XB 	ENSMUST00000087399.4|Tnxb|ENSMUSG00000033327.10|tenascin XB
mm10_v2_chr3_-_110142996_110143010	0.0716618	GUAAACA	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr19_-_10304867_10304954	0.0716438	GUAAACA	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr2_+_124610573_124610613	0.0709529	GUAAACA	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr3_-_50443603_50443615	0.0705631	GUAAACA	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr9_-_108190352_108190420	0.0705144	GUAAACA	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr10_-_94944578_94944578	0.0703638	GUAAACA	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr9_+_106170918_106170953	0.0702811	GUAAACA	ENSMUST00000020490.5|Wdr82|ENSMUSG00000020257.6|WD repeat domain containing 82
mm10_v2_chr5_-_106696819_106696839	0.0683778	GUAAACA	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr18_-_46280820_46280850	0.0682883	GUAAACA	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr10_-_119240006_119240092	0.0677223	GUAAACA	ENSMUST00000020315.6|Cand1|ENSMUSG00000020114.6|cullin associated and neddylation disassociated 1
mm10_v2_chr3_-_19311269_19311322	0.0676181	GUAAACA	ENSMUST00000099195.3|Pde7a|ENSMUSG00000069094.6|phosphodiesterase 7A
mm10_v2_chr10_+_52417532_52417580	0.0674771	GUAAACA	ENSMUST00000023830.8|Nus1|ENSMUSG00000023068.8|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm10_v2_chr4_+_59805829_59805914	0.0669147	GUAAACA	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr2_+_109890846_109890882	0.0666712	GUAAACA	ENSMUST00000028583.7|Lin7c|ENSMUSG00000027162.7|lin-7 homolog C (C. elegans)
mm10_v2_chr14_-_33447142_33447179	0.0663689	GUAAACA	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr2_+_102658640_102658669	0.0661911	GUAAACA	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr12_+_111039334_111039400	0.0661711	GUAAACA	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr12_-_100725028_100725081	0.066129	GUAAACA	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr13_-_107890059_107890073	0.0659033	GUAAACA	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr1_+_163929765_163929809	0.0656416	GUAAACA	ENSMUST00000027876.4|Scyl3|ENSMUSG00000026584.8|SCY1-like 3 (S. cerevisiae) 	ENSMUST00000170359.1|Scyl3|ENSMUSG00000026584.8|SCY1-like 3 (S. cerevisiae)
mm10_v2_chr1_-_60566708_60566769	0.0653786	GUAAACA	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chr1_+_136624901_136624949	0.0649983	GUAAACA	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr9_-_108263887_108263965	0.0649732	GUAAACA	ENSMUST00000166905.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1 	ENSMUST00000080435.2|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr14_-_99046110_99046141	0.064405	GUAAACA	ENSMUST00000042662.8|Mzt1|ENSMUSG00000033186.8|mitotic spindle organizing protein 1
mm10_v2_chr6_-_39725448_39725478	0.0637145	GUAAACA	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr5_+_72647779_72647801	0.0634081	GUAAACA	ENSMUST00000087212.3|Nipal1|ENSMUSG00000067219.5|NIPA-like domain containing 1
mm10_v2_chr3_-_75556759_75556871	0.0633198	GUAAACA	ENSMUST00000162138.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000029424.5|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000161137.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10
mm10_v2_chr2_-_142901506_142901576	0.0628565	GUAAACA	ENSMUST00000043589.7|Kif16b|ENSMUSG00000038844.8|kinesin family member 16B
mm10_v2_chr4_+_33031371_33031524	0.06274	GUAAACA	ENSMUST00000124992.1|Ube2j1|ENSMUSG00000028277.7|ubiquitin-conjugating enzyme E2J 1
mm10_v2_chr8_+_47533639_47533709	0.0625739	GUAAACA	ENSMUST00000033973.7|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A 	ENSMUST00000176379.1|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A
mm10_v2_chr13_-_85288999_85289058	0.0623455	GUAAACA	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr2_-_60125651_60125775	0.0622726	GUAAACA	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr12_-_54862783_54862921	0.0620542	GUAAACA	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr8_+_93810832_93810843	0.0613942	GUAAACA	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr9_-_44881274_44881323	0.0599178	GUAAACA	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr8_-_9771018_9771018	0.0594405	GUAAACA	ENSMUST00000110969.3|Fam155a|ENSMUSG00000079157.3|family with sequence similarity 155, member A
mm10_v2_chr4_-_149698698_149698711	0.0593497	GUAAACA	ENSMUST00000038859.7|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide 	ENSMUST00000105690.2|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm10_v2_chr7_-_34313531_34313568	0.0583122	GUAAACA	ENSMUST00000108074.1|4931406P16Rik|ENSMUSG00000066571.7|RIKEN cDNA 4931406P16 gene
mm10_v2_chr8_+_40307458_40307458	0.058206	GUAAACA	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr8_-_67974567_67974596	0.05724	GUAAACA	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr14_-_88471396_88471396	0.0566269	GUAAACA	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr8_+_90828820_90828842	0.0552336	GUAAACA	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr2_-_116065798_116065853	0.0548113	GUAAACA	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr19_+_4214238_4214363	0.054768	GUAAACA	ENSMUST00000046506.6|Clcf1|ENSMUSG00000040663.8|cardiotrophin-like cytokine factor 1
mm10_v2_chr15_+_34082664_34082734	0.0541627	GUAAACA	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chr15_-_102516806_102517064	0.0533517	GUAAACA	ENSMUST00000169162.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000023812.2|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000165174.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169367.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169377.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr12_-_79296266_79296310	0.0533468	GUAAACA	ENSMUST00000021547.6|Zfyve26|ENSMUSG00000066440.4|zinc finger, FYVE domain containing 26
mm10_v2_chr10_-_42276744_42276763	0.0527013	GUAAACA	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr8_-_111027752_111027791	0.0526115	GUAAACA	ENSMUST00000040241.8|Ddx19b|ENSMUSG00000033658.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm10_v2_chr8_-_111393810_111393834	0.0523031	GUAAACA	ENSMUST00000038475.8|Fa2h|ENSMUSG00000033579.10|fatty acid 2-hydroxylase
mm10_v2_chr7_+_46796088_46796134	0.051871	GUAAACA	ENSMUST00000006774.4|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1 	ENSMUST00000165031.1|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1
mm10_v2_chr15_-_38519227_38519271	0.0518005	GUAAACA	ENSMUST00000110328.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000110329.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000065308.5|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1
mm10_v2_chr5_+_150673739_150673827	0.0505136	GUAAACA	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr13_+_118714678_118714701	0.0468202	GUAAACA	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr14_-_61439831_61439947	0.0464803	GUAAACA	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr5_+_86804214_86804276	0.045956	GUAAACA	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr11_-_102697710_102697782	0.0456185	GUAAACA	ENSMUST00000164506.2|Ccdc43|ENSMUSG00000020925.10|coiled-coil domain containing 43 	ENSMUST00000092569.6|Ccdc43|ENSMUSG00000020925.10|coiled-coil domain containing 43
mm10_v2_chr2_+_31572701_31572725	0.0452321	GUAAACA	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr8_+_84831522_84831522	0.0451127	GUAAACA	ENSMUST00000036734.5|Gadd45gip1|ENSMUSG00000033751.5|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm10_v2_chr5_-_140389188_140389254	0.0445451	GUAAACA	ENSMUST00000031539.7|Snx8|ENSMUSG00000029560.8|sorting nexin 8
mm10_v2_chr8_+_107293463_107293483	0.0444125	GUAAACA	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr11_+_75679259_75679327	0.0440855	GUAAACA	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr4_+_45184815_45184906	0.0438734	GUAAACA	ENSMUST00000134280.1|Frmpd1|ENSMUSG00000035615.6|FERM and PDZ domain containing 1 	ENSMUST00000044773.5|Frmpd1|ENSMUSG00000035615.6|FERM and PDZ domain containing 1
mm10_v2_chr6_+_122874526_122874573	0.0437268	GUAAACA	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr18_-_67724560_67724599	0.0437207	GUAAACA	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr9_-_22052021_22052026	0.0417344	GUAAACA	ENSMUST00000003501.7|Elavl3|ENSMUSG00000003410.7|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm10_v2_chr10_-_117376955_117376978	0.0416815	GUAAACA	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr6_+_38433913_38433965	0.0411573	GUAAACA	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr18_+_35562158_35562174	0.0411286	GUAAACA	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr19_+_28990476_28990497	0.0405824	GUAAACA	ENSMUST00000050148.3|Cdc37l1|ENSMUSG00000024780.6|cell division cycle 37-like 1
mm10_v2_chr17_+_6106880_6106907	0.0405116	GUAAACA	ENSMUST00000149756.1|Tulp4|ENSMUSG00000034377.4|tubby like protein 4
mm10_v2_chr6_+_71707561_71707561	0.0402746	GUAAACA	ENSMUST00000121469.1|Reep1|ENSMUSG00000052852.7|receptor accessory protein 1
mm10_v2_chr18_+_32163073_32163115	0.0398486	GUAAACA	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr14_-_57890242_57890320	0.0391806	GUAAACA	ENSMUST00000089473.3|Zdhhc20|ENSMUSG00000021969.7|zinc finger, DHHC domain containing 20
mm10_v2_chr11_+_21091291_21091339	0.0391049	GUAAACA	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chr6_-_71632897_71632947	0.0389351	GUAAACA	ENSMUST00000065509.4|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr10_-_67285180_67285316	0.0385796	GUAAACA	ENSMUST00000159002.1|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2 	ENSMUST00000077839.6|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2
mm10_v2_chr12_-_56535047_56535106	0.0384788	GUAAACA	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr5_-_76304474_76304548	0.0383191	GUAAACA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr7_+_90130227_90130279	0.037732	GUAAACA	ENSMUST00000049537.7|Picalm|ENSMUSG00000039361.9|phosphatidylinositol binding clathrin assembly protein
mm10_v2_chr18_+_73573044_73573044	0.037727	GUAAACA	ENSMUST00000091852.4|Mex3c|ENSMUSG00000037253.8|mex3 homolog C (C. elegans)
mm10_v2_chr15_-_36794498_36794547	0.0375879	GUAAACA	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr11_+_53567361_53567526	0.0375141	GUAAACA	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr1_-_182341585_182341625	0.0372068	GUAAACA	ENSMUST00000051431.4|Fbxo28|ENSMUSG00000047539.4|F-box protein 28
mm10_v2_chr16_+_33380765_33380787	0.036356	GUAAACA	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr15_+_39076885_39076938	0.0361497	GUAAACA	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr12_-_8499985_8500017	0.036001	GUAAACA	ENSMUST00000067384.4|Rhob|ENSMUSG00000054364.4|ras homolog gene family, member B
mm10_v2_chr15_-_94589870_94589889	0.0359433	GUAAACA	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr10_-_67096931_67096988	0.0354861	GUAAACA	ENSMUST00000020023.7|Reep3|ENSMUSG00000019873.7|receptor accessory protein 3
mm10_v2_chr16_+_30599717_30599734	0.0354406	GUAAACA	ENSMUST00000059078.3|Fam43a|ENSMUSG00000046546.3|family with sequence similarity 43, member A
mm10_v2_chr11_+_107547925_107547968	0.0353194	GUAAACA	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr18_+_36281069_36281151	0.0338654	GUAAACA	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr15_+_38661904_38661981	0.033215	GUAAACA	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr1_-_72536930_72536999	0.0331078	GUAAACA	ENSMUST00000047786.5|March4|ENSMUSG00000039372.5|membrane-associated ring finger (C3HC4) 4
mm10_v2_chr3_+_16183177_16183206	0.0328008	GUAAACA	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr4_-_136835843_136835988	0.0325637	GUAAACA	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr2_+_71786923_71786978	0.0323841	GUAAACA	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr3_+_156561792_156561869	0.0316969	GUAAACA	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr10_-_60752773_60752820	0.0312519	GUAAACA	ENSMUST00000117513.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3 	ENSMUST00000119595.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3
mm10_v2_chrX_+_99975570_99975781	0.0312412	GUAAACA	ENSMUST00000113779.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113776.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113775.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113780.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113778.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113781.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113783.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000071453.2|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113777.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A
mm10_v2_chr1_-_155972887_155972890	0.0307322	GUAAACA	ENSMUST00000138762.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350 	ENSMUST00000124495.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350
mm10_v2_chr14_-_60086832_60086890	0.0306903	GUAAACA	ENSMUST00000080368.5|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr4_+_119255494_119255509	0.0299287	GUAAACA	ENSMUST00000094823.3|Cldn19|ENSMUSG00000066058.5|claudin 19
mm10_v2_chr4_+_100095791_100095867	0.0295151	GUAAACA	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr16_+_91729281_91729390	0.0292827	GUAAACA	ENSMUST00000114001.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113999.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000064797.5|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000114002.2|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000095909.3|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000056482.7|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113996.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A)
mm10_v2_chr10_+_106470281_106470367	0.0289775	GUAAACA	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr5_-_92310003_92310024	0.0284743	GUAAACA	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chr1_+_136131382_136131404	0.028128	GUAAACA	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chr15_-_96699698_96699717	0.0276781	GUAAACA	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr9_-_114933929_114933999	0.0273203	GUAAACA	ENSMUST00000146623.1|Gpd1l|ENSMUSG00000050627.7|glycerol-3-phosphate dehydrogenase 1-like
mm10_v2_chr13_+_77708683_77708740	0.0272414	GUAAACA	ENSMUST00000163257.1|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000091459.4|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000099358.3|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A
mm10_v2_chrX_+_153237748_153237748	0.0271436	GUAAACA	ENSMUST00000112574.2|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chrX_-_147554050_147554087	0.0269357	GUAAACA	ENSMUST00000112819.2|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENSMUST00000136789.1|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2
mm10_v2_chr2_-_131562283_131562283	0.0268381	GUAAACA	ENSMUST00000103184.3|Adra1d|ENSMUSG00000027335.9|adrenergic receptor, alpha 1d
mm10_v2_chr1_-_161131428_161131511	0.0266146	GUAAACA	ENSMUST00000111611.1|Klhl20|ENSMUSG00000026705.10|kelch-like 20
mm10_v2_chr14_+_75016027_75016045	0.0263387	GUAAACA	ENSMUST00000036072.7|5031414D18Rik|ENSMUSG00000034959.7|RIKEN cDNA 5031414D18 gene
mm10_v2_chr19_+_23141183_23141263	0.025429	GUAAACA	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr16_+_87698904_87698959	0.0252451	GUAAACA	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr2_-_129309964_129309978	0.0252421	GUAAACA	ENSMUST00000028882.1|Il1a|ENSMUSG00000027399.1|interleukin 1 alpha
mm10_v2_chr7_-_89980935_89981009	0.02497	GUAAACA	ENSMUST00000107234.1|Eed|ENSMUSG00000030619.8|embryonic ectoderm development
mm10_v2_chr11_+_76407143_76407201	0.0247531	GUAAACA	ENSMUST00000021203.6|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22 	ENSMUST00000152183.1|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22
mm10_v2_chr1_+_33719863_33719901	0.0240495	GUAAACA	ENSMUST00000088287.3|Rab23|ENSMUSG00000004768.8|RAB23, member RAS oncogene family
mm10_v2_chr2_-_37647199_37647285	0.0237363	GUAAACA	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr3_-_103791537_103791563	0.0234357	GUAAACA	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr3_+_102734496_102734530	0.0234322	GUAAACA	ENSMUST00000029451.5|Tspan2|ENSMUSG00000027858.7|tetraspanin 2
mm10_v2_chr4_+_21879662_21879702	0.0231446	GUAAACA	ENSMUST00000029909.2|Coq3|ENSMUSG00000028247.2|coenzyme Q3 homolog, methyltransferase (yeast)
mm10_v2_chr10_+_94036001_94036121	0.0226322	GUAAACA	ENSMUST00000020208.4|Fgd6|ENSMUSG00000020021.4|FYVE, RhoGEF and PH domain containing 6
mm10_v2_chr3_-_9610074_9610086	0.0222987	GUAAACA	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr5_-_9725305_9725352	0.0220242	GUAAACA	ENSMUST00000004076.3|Grm3|ENSMUSG00000003974.5|glutamate receptor, metabotropic 3
mm10_v2_chr8_+_124520767_124520865	0.0201572	GUAAACA	ENSMUST00000034460.4|Cog2|ENSMUSG00000031979.11|component of oligomeric golgi complex 2
mm10_v2_chr16_-_96082389_96082481	0.0197209	GUAAACA	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr16_-_92826004_92826080	0.019113	GUAAACA	ENSMUST00000023673.7|Runx1|ENSMUSG00000022952.10|runt related transcription factor 1
mm10_v2_chr3_+_101377074_101377158	0.0188525	GUAAACA	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr13_+_14063776_14063822	0.0181243	GUAAACA	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr11_+_31872100_31872226	0.0179427	GUAAACA	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr5_+_93093428_93093457	0.01788	GUAAACA	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr11_-_82829024_82829043	0.0176873	GUAAACA	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr1_+_74506044_74506105	0.0173975	GUAAACA	ENSMUST00000087215.5|Rqcd1|ENSMUSG00000026174.8|rcd1 (required for cell differentiation) homolog 1 (S. pombe)
mm10_v2_chr2_-_167349167_167349249	0.0173453	GUAAACA	ENSMUST00000109221.2|B4galt5|ENSMUSG00000017929.7|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm10_v2_chr4_+_155563700_155563908	0.0167922	GUAAACA	ENSMUST00000105613.3|Nadk|ENSMUSG00000029063.10|NAD kinase 	ENSMUST00000143840.1|Nadk|ENSMUSG00000029063.10|NAD kinase 	ENSMUST00000146080.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chrX_+_112604274_112604274	0.0165549	GUAAACA	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr3_-_104864420_104864505	0.0163542	GUAAACA	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr12_+_70825492_70825514	0.0162439	GUAAACA	ENSMUST00000057859.7|Frmd6|ENSMUSG00000048285.8|FERM domain containing 6
mm10_v2_chr18_-_88894322_88894371	0.015698	GUAAACA	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr11_+_46055973_46056068	0.0156547	GUAAACA	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr6_+_91684061_91684132	0.0155707	GUAAACA	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr2_+_119325784_119325817	0.0151414	GUAAACA	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr18_+_44380479_44380554	0.0149201	GUAAACA	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr8_+_105170668_105170686	0.0147648	GUAAACA	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr1_-_58586191_58586323	0.0144714	GUAAACA	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr1_-_64956807_64956824	0.0143227	GUAAACA	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr3_-_97227364_97227421	0.0142448	GUAAACA	ENSMUST00000046521.7|Bcl9|ENSMUSG00000038256.9|B cell CLL/lymphoma 9
mm10_v2_chr6_-_71440623_71440645	0.0136877	GUAAACA	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr10_+_52233612_52233672	0.0136756	GUAAACA	ENSMUST00000069004.5|Dcbld1|ENSMUSG00000019891.7|discoidin, CUB  and LCCL domain containing 1 	ENSMUST00000105476.2|Dcbld1|ENSMUSG00000019891.7|discoidin, CUB  and LCCL domain containing 1
mm10_v2_chr16_-_62786742_62786797	0.0136125	GUAAACA	ENSMUST00000152553.1|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3 	ENSMUST00000063089.5|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3
mm10_v2_chr8_+_106059562_106059623	0.0132852	GUAAACA	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr18_+_64340225_64340364	0.0128318	GUAAACA	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr13_+_41606216_41606216	0.0121724	GUAAACA	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr2_+_31759932_31759989	0.0118851	GUAAACA	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr19_+_40894692_40894736	0.0118537	GUAAACA	ENSMUST00000050092.6|Zfp518a|ENSMUSG00000049164.6|zinc finger protein 518A
mm10_v2_chr15_-_78718113_78718113	0.0118185	GUAAACA	ENSMUST00000088592.4|Elfn2|ENSMUSG00000043460.6|leucine rich repeat and fibronectin type III, extracellular 2
mm10_v2_chr5_-_102069905_102069940	0.011687	GUAAACA	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr3_-_89960562_89960629	0.0116574	GUAAACA	ENSMUST00000069805.7|Atp8b2|ENSMUSG00000060671.6|ATPase, class I, type 8B, member 2
mm10_v2_chr10_-_111010001_111010066	0.011347	GUAAACA	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr2_-_62573905_62574075	0.0110979	GUAAACA	ENSMUST00000102732.3|Fap|ENSMUSG00000000392.11|fibroblast activation protein
mm10_v2_chr16_+_37868383_37868481	0.0110564	GUAAACA	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr10_-_84440591_84440604	0.00968307	GUAAACA	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr8_-_95853501_95853539	0.00933682	GUAAACA	ENSMUST00000040481.3|Slc38a7|ENSMUSG00000036534.5|solute carrier family 38, member 7
mm10_v2_chr2_-_120404058_120404092	0.00917607	GUAAACA	ENSMUST00000090042.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000110729.1|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000090046.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A
mm10_v2_chr7_+_82867327_82867357	0.00900181	GUAAACA	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr6_-_30958990_30958990	0.00895833	GUAAACA	ENSMUST00000101589.3|Klf14|ENSMUSG00000073209.3|Kruppel-like factor 14
mm10_v2_chr12_+_36090379_36090379	0.00892179	GUAAACA	ENSMUST00000071825.5|Gm5434|ENSMUSG00000059301.5|predicted gene 5434
mm10_v2_chr5_+_123394782_123394826	0.00883631	GUAAACA	ENSMUST00000111596.1|Mlxip|ENSMUSG00000038342.9|MLX interacting protein 	ENSMUST00000068237.5|Mlxip|ENSMUSG00000038342.9|MLX interacting protein
mm10_v2_chr12_+_113098199_113098323	0.00876166	GUAAACA	ENSMUST00000009099.6|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109723.1|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109726.1|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109727.2|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000069690.4|Mta1|ENSMUSG00000021144.8|metastasis associated 1
mm10_v2_chr5_+_32136458_32136505	0.00847731	GUAAACA	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chr14_+_31019125_31019157	0.00828787	GUAAACA	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr9_+_118606687_118606751	0.00793477	GUAAACA	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr13_-_56135629_56135655	0.00684928	GUAAACA	ENSMUST00000016081.6|H2afy|ENSMUSG00000015937.8|H2A histone family, member Y 	ENSMUST00000045788.7|H2afy|ENSMUSG00000015937.8|H2A histone family, member Y
mm10_v2_chr10_+_3366125_3366160	0.00638749	GUAAACA	ENSMUST00000043374.5|Ppp1r14c|ENSMUSG00000040653.5|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm10_v2_chrX_-_106603677_106603702	0.00616164	GUAAACA	ENSMUST00000113480.1|Cysltr1|ENSMUSG00000052821.3|cysteinyl leukotriene receptor 1
mm10_v2_chr18_-_52529847_52529890	0.00547555	GUAAACA	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr16_+_91647859_91647905	0.00529589	GUAAACA	ENSMUST00000119368.1|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000114037.2|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000114036.2|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000122302.1|Son|ENSMUSG00000022961.11|Son DNA binding protein
mm10_v2_chr15_-_88734217_88734240	0.00491721	GUAAACA	ENSMUST00000088911.3|Brd1|ENSMUSG00000022387.10|bromodomain containing 1 	ENSMUST00000109381.1|Brd1|ENSMUSG00000022387.10|bromodomain containing 1
mm10_v2_chr1_+_9798123_9798216	0.00471533	GUAAACA	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr11_-_101302206_101302291	0.00418418	GUAAACA	ENSMUST00000140706.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000170502.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000172233.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000130916.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related
mm10_v2_chr11_-_51756378_51756618	0.00363285	GUAAACA	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr13_-_93192270_93192328	0.00343981	GUAAACA	ENSMUST00000048702.5|Papd4|ENSMUSG00000042167.5|PAP associated domain containing 4
mm10_v2_chr2_+_49451486_49451559	0.00319983	GUAAACA	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr12_+_108179738_108179831	0.00316247	GUAAACA	ENSMUST00000101055.4|Ccnk|ENSMUSG00000021258.9|cyclin K
mm10_v2_chr2_+_129800451_129800526	0.00311831	GUAAACA	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr13_-_45964964_45965001	0.00231851	GUAAACA	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr12_+_108410542_108410585	0.00227472	GUAAACA	ENSMUST00000054955.7|Eml1|ENSMUSG00000058070.8|echinoderm microtubule associated protein like 1
mm10_v2_chr1_-_82291370_82291416	0.00205965	GUAAACA	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr2_-_18998126_18998202	0.001937	GUAAACA	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr2_+_25332729_25332782	0.00167991	GUAAACA	ENSMUST00000042390.4|Man1b1|ENSMUSG00000036646.7|mannosidase, alpha, class 1B, member 1
mm10_v2_chr1_-_63114516_63114667	0.00146353	GUAAACA	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr9_+_68653761_68653786	0.00145228	GUAAACA	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr10_+_115384951_115385021	0.00132786	GUAAACA	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr1_-_52727457_52727474	0.00129441	GUAAACA	ENSMUST00000156876.1|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6 	ENSMUST00000087701.3|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6
mm10_v2_chr10_+_127739516_127739592	0.00118394	GUAAACA	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr10_-_31609184_31609184	0.00102237	GUAAACA	ENSMUST00000081989.6|Rnf217|ENSMUSG00000063760.8|ring finger protein 217
mm10_v2_chr8_+_107150621_107150690	0.000850942	GUAAACA	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr15_+_65787023_65787090	0.000571171	GUAAACA	ENSMUST00000015146.9|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000173858.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000172756.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000174856.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae)
mm10_v2_chr12_+_59066908_59066931	0.000352307	GUAAACA	ENSMUST00000021381.4|Pnn|ENSMUSG00000020994.4|pinin
mm10_v2_chr8_+_111536492_111536640	0.000184127	GUAAACA	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr8_-_125898291_125898322	7.27982e-05	GUAAACA	ENSMUST00000047239.6|Pcnxl2|ENSMUSG00000060212.7|pecanex-like 2 (Drosophila)
