mm10_v2_chr2_+_70563435_70563461	1.34386	Hoxa4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr3_+_115080965_115081036	1.12298	Hoxa4	ENSMUST00000051309.8|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr9_-_121792478_121792507	1.08712	Hoxa4	ENSMUST00000035110.4|Hhatl|ENSMUSG00000032523.4|hedgehog acyltransferase-like
mm10_v2_chr18_+_37489465_37489465	0.951327	Hoxa4	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr2_+_170731807_170731920	0.897201	Hoxa4	ENSMUST00000029075.4|Dok5|ENSMUSG00000027560.4|docking protein 5
mm10_v2_chr2_+_90885860_90885872	0.818244	Hoxa4	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr18_+_37447641_37447674	0.757522	Hoxa4	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr19_-_42752710_42752775	0.706946	Hoxa4	ENSMUST00000076505.3|Pyroxd2|ENSMUSG00000060224.3|pyridine nucleotide-disulphide oxidoreductase domain 2
mm10_v2_chr5_+_137030275_137030295	0.679751	Hoxa4	ENSMUST00000041543.8|Vgf|ENSMUSG00000037428.8|VGF nerve growth factor inducible
mm10_v2_chr16_+_22857845_22857914	0.674217	Hoxa4	ENSMUST00000004574.7|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000178320.1|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000166487.2|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11
mm10_v2_chr12_+_69790288_69790288	0.670957	Hoxa4	ENSMUST00000021378.3|4930512B01Rik|ENSMUSG00000020992.3|RIKEN cDNA 4930512B01 gene
mm10_v2_chrX_+_159840463_159840481	0.648014	Hoxa4	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr7_-_100855403_100855440	0.610971	Hoxa4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr13_+_89540636_89540678	0.595086	Hoxa4	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr15_+_99055164_99055183	0.588998	Hoxa4	ENSMUST00000047104.7|Prph|ENSMUSG00000023484.7|peripherin 	ENSMUST00000024249.3|Prph|ENSMUSG00000023484.7|peripherin
mm10_v2_chr14_-_108914237_108914257	0.578635	Hoxa4	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chrX_-_38252398_38252439	0.55763	Hoxa4	ENSMUST00000089056.3|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000089054.4|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000066498.7|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A
mm10_v2_chrX_+_48623737_48623790	0.548429	Hoxa4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr14_-_50897456_50897507	0.532725	Hoxa4	ENSMUST00000170855.1|A930018M24Rik|ENSMUSG00000091089.1|RIKEN cDNA A930018M24 gene
mm10_v2_chr10_-_128525859_128525880	0.518809	Hoxa4	ENSMUST00000026427.6|Esyt1|ENSMUSG00000025366.7|extended synaptotagmin-like protein 1
mm10_v2_chr12_+_109546333_109546398	0.494093	Hoxa4	ENSMUST00000166636.2|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr18_+_76059458_76059501	0.483815	Hoxa4	ENSMUST00000167921.1|Zbtb7c|ENSMUSG00000044646.8|zinc finger and BTB domain containing 7C
mm10_v2_chr7_+_90348699_90348699	0.48203	Hoxa4	ENSMUST00000107211.1|Sytl2|ENSMUSG00000030616.8|synaptotagmin-like 2 	ENSMUST00000107210.1|Sytl2|ENSMUSG00000030616.8|synaptotagmin-like 2
mm10_v2_chr18_+_37435602_37435636	0.476327	Hoxa4	ENSMUST00000055495.5|Pcdhb12|ENSMUSG00000043458.5|protocadherin beta 12
mm10_v2_chr1_-_110977366_110977382	0.470695	Hoxa4	ENSMUST00000094626.3|Cdh19|ENSMUSG00000047216.7|cadherin 19, type 2
mm10_v2_chr12_+_109546409_109546493	0.459169	Hoxa4	ENSMUST00000143847.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr1_+_109983737_109983737	0.455827	Hoxa4	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr9_-_50555170_50555183	0.454142	Hoxa4	ENSMUST00000119103.1|Bco2|ENSMUSG00000032066.9|beta-carotene oxygenase 2
mm10_v2_chr14_+_65266701_65266752	0.431428	Hoxa4	ENSMUST00000169656.1|Fbxo16|ENSMUSG00000034532.8|F-box protein 16
mm10_v2_chr7_-_109731708_109731732	0.422968	Hoxa4	ENSMUST00000035372.1|Ascl3|ENSMUSG00000035951.1|achaete-scute complex homolog 3 (Drosophila)
mm10_v2_chr16_+_17331371_17331427	0.410793	Hoxa4	ENSMUST00000023450.6|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1 	ENSMUST00000161034.1|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm10_v2_chr16_+_4639941_4639978	0.407887	Hoxa4	ENSMUST00000038770.3|Vasn|ENSMUSG00000039646.5|vasorin
mm10_v2_chr16_-_22857514_22857576	0.392943	Hoxa4	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr2_+_20737306_20737321	0.389005	Hoxa4	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr6_-_52012476_52012551	0.382715	Hoxa4	ENSMUST00000078214.5|Skap2|ENSMUSG00000059182.5|src family associated phosphoprotein 2
mm10_v2_chr7_+_51878967_51879000	0.376173	Hoxa4	ENSMUST00000051912.6|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr4_+_99295900_99295900	0.375422	Hoxa4	ENSMUST00000094955.1|Gm12689|ENSMUSG00000070891.1|predicted gene 12689
mm10_v2_chr6_+_43265582_43265681	0.374335	Hoxa4	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr10_-_93311073_93311161	0.369328	Hoxa4	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr6_-_52191695_52191753	0.368435	Hoxa4	ENSMUST00000101395.2|Hoxa4|ENSMUSG00000000942.10|homeobox A4
mm10_v2_chrX_+_56454871_56454887	0.366903	Hoxa4	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr7_+_51879041_51879064	0.355628	Hoxa4	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr18_+_37307445_37307462	0.346666	Hoxa4	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr4_-_62519885_62519967	0.346162	Hoxa4	ENSMUST00000107444.1|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase 	ENSMUST00000030090.3|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase
mm10_v2_chr13_+_23555023_23555039	0.340501	Hoxa4	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr17_+_80307396_80307413	0.338162	Hoxa4	ENSMUST00000068175.5|Arhgef33|ENSMUSG00000054901.5|Rho guanine nucleotide exchange factor (GEF) 33
mm10_v2_chr10_-_127121125_127121160	0.333159	Hoxa4	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr10_-_64090265_64090297	0.331096	Hoxa4	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr6_+_5390387_5390427	0.328077	Hoxa4	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr8_+_46986913_46986962	0.325379	Hoxa4	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr18_+_37819543_37819570	0.324381	Hoxa4	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr6_+_86527312_86527401	0.319834	Hoxa4	ENSMUST00000181928.1|1600020E01Rik|ENSMUSG00000097048.1|RIKEN cDNA 1600020E01 gene
mm10_v2_chr4_+_114821722_114821722	0.317831	Hoxa4	ENSMUST00000137570.1|Gm12830|ENSMUSG00000055198.3|predicted gene 12830
mm10_v2_chr17_+_39846958_39847059	0.310795	Hoxa4	ENSMUST00000182010.1|Gm26924|ENSMUSG00000098178.1|predicted gene, 26924
mm10_v2_chr1_-_130729249_130729260	0.310221	Hoxa4	ENSMUST00000171479.1|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr12_+_10390756_10390836	0.310032	Hoxa4	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr13_-_55362782_55362804	0.30875	Hoxa4	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr2_+_174327747_174327768	0.303603	Hoxa4	ENSMUST00000087871.4|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr1_-_5070281_5070288	0.29807	Hoxa4	ENSMUST00000147158.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20 	ENSMUST00000118000.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20
mm10_v2_chr19_+_11965817_11965887	0.296339	Hoxa4	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr18_+_37300799_37300835	0.283111	Hoxa4	ENSMUST00000051754.1|Pcdhb3|ENSMUSG00000045498.1|protocadherin beta 3
mm10_v2_chr17_+_43667389_43667425	0.271123	Hoxa4	ENSMUST00000170988.1|Cyp39a1|ENSMUSG00000023963.9|cytochrome P450, family 39, subfamily a, polypeptide 1
mm10_v2_chr11_-_98729374_98729435	0.270664	Hoxa4	ENSMUST00000126565.1|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000100500.2|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000017354.6|Med24|ENSMUSG00000017210.8|mediator complex subunit 24
mm10_v2_chr4_+_5724304_5724357	0.26858	Hoxa4	ENSMUST00000108380.1|Fam110b|ENSMUSG00000049119.8|family with sequence similarity 110, member B
mm10_v2_chr13_+_42680565_42680623	0.265789	Hoxa4	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr11_+_96302595_96302595	0.262895	Hoxa4	ENSMUST00000049272.3|Hoxb5|ENSMUSG00000038700.3|homeobox B5
mm10_v2_chr6_+_77242715_77242729	0.259217	Hoxa4	ENSMUST00000161677.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr6_+_77242644_77242697	0.254535	Hoxa4	ENSMUST00000159616.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chrX_-_150814265_150814345	0.254243	Hoxa4	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr8_+_114205590_114205642	0.251384	Hoxa4	ENSMUST00000049509.6|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica) 	ENSMUST00000150963.1|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica)
mm10_v2_chr11_-_116189542_116189575	0.249557	Hoxa4	ENSMUST00000148601.1|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr6_-_41035501_41035514	0.247484	Hoxa4	ENSMUST00000031931.5|2210010C04Rik|ENSMUSG00000029882.5|RIKEN cDNA 2210010C04 gene
mm10_v2_chr12_+_59129720_59129755	0.246004	Hoxa4	ENSMUST00000175912.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176892.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr11_-_49114874_49114874	0.239957	Hoxa4	ENSMUST00000109201.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr9_-_67832325_67832331	0.239807	Hoxa4	ENSMUST00000054500.5|C2cd4a|ENSMUSG00000047990.5|C2 calcium-dependent domain containing 4A
mm10_v2_chr2_+_4400958_4400975	0.239337	Hoxa4	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr5_-_32133045_32133168	0.237172	Hoxa4	ENSMUST00000031308.6|Gm10463|ENSMUSG00000073058.2|predicted gene 10463
mm10_v2_chr12_-_84361802_84361838	0.235487	Hoxa4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr10_+_39612934_39612934	0.233531	Hoxa4	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr15_-_102366314_102366338	0.231784	Hoxa4	ENSMUST00000078508.5|Sp7|ENSMUSG00000060284.6|Sp7 transcription factor 7
mm10_v2_chr18_-_37178493_37178531	0.225269	Hoxa4	ENSMUST00000181887.1|Gm10544|ENSMUSG00000097430.1|predicted gene 10544 	ENSMUST00000180516.1|Gm10544|ENSMUSG00000097430.1|predicted gene 10544
mm10_v2_chr8_+_47713266_47713266	0.224009	Hoxa4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr4_+_144892813_144892835	0.221906	Hoxa4	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_+_144893077_144893103	0.218235	Hoxa4	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr6_+_58833689_58833734	0.215625	Hoxa4	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr7_+_90426312_90426312	0.215317	Hoxa4	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr5_-_100373484_100373527	0.213656	Hoxa4	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr3_-_88177671_88177785	0.212761	Hoxa4	ENSMUST00000181837.1|1700113A16Rik|ENSMUSG00000096935.1|RIKEN cDNA 1700113A16 gene
mm10_v2_chr19_-_57197556_57197631	0.212218	Hoxa4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr4_+_86575668_86575689	0.207333	Hoxa4	ENSMUST00000091064.6|Rraga|ENSMUSG00000070934.5|Ras-related GTP binding A
mm10_v2_chr1_+_130731963_130731991	0.2002	Hoxa4	ENSMUST00000039323.6|AA986860|ENSMUSG00000042510.6|expressed sequence AA986860
mm10_v2_chr15_+_32920723_32920826	0.198788	Hoxa4	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr1_-_93478785_93478823	0.198083	Hoxa4	ENSMUST00000170883.1|Hdlbp|ENSMUSG00000034088.9|high density lipoprotein (HDL) binding protein
mm10_v2_chr12_+_59129757_59129818	0.196652	Hoxa4	ENSMUST00000069430.8|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000177370.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr8_+_4238815_4238886	0.195929	Hoxa4	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chrX_+_136822781_136822840	0.195635	Hoxa4	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr18_+_37341702_37341728	0.194306	Hoxa4	ENSMUST00000053037.3|Pcdhb7|ENSMUSG00000045062.3|protocadherin beta 7
mm10_v2_chr5_+_105824511_105824511	0.19014	Hoxa4	ENSMUST00000055994.3|D830014E11Rik|ENSMUSG00000045750.3|RIKEN cDNA D830014E11 gene
mm10_v2_chrX_+_20687954_20688039	0.189724	Hoxa4	ENSMUST00000115364.1|Cdk16|ENSMUSG00000031065.8|cyclin-dependent kinase 16
mm10_v2_chr11_+_94327984_94328029	0.188693	Hoxa4	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr2_-_13271268_13271348	0.18817	Hoxa4	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr10_-_24092320_24092320	0.187686	Hoxa4	ENSMUST00000092654.2|Taar8b|ENSMUSG00000092113.1|trace amine-associated receptor 8B
mm10_v2_chr6_-_92534855_92534890	0.186743	Hoxa4	ENSMUST00000113446.1|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr7_-_35056467_35056556	0.18573	Hoxa4	ENSMUST00000130491.1|Cebpg|ENSMUSG00000056216.8|CCAAT/enhancer binding protein (C/EBP), gamma
mm10_v2_chr7_-_19699008_19699166	0.185717	Hoxa4	ENSMUST00000174355.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000172983.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174710.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000167646.2|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000003066.9|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174064.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E
mm10_v2_chr6_-_56901870_56901891	0.184072	Hoxa4	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr9_-_49798729_49798855	0.183514	Hoxa4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chrX_+_136822671_136822780	0.180834	Hoxa4	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr17_+_34592248_34592329	0.179194	Hoxa4	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr10_+_127501672_127501706	0.178774	Hoxa4	ENSMUST00000160019.1|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3 	ENSMUST00000160610.1|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3
mm10_v2_chr12_-_56535047_56535106	0.178308	Hoxa4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr10_-_24101951_24101951	0.175376	Hoxa4	ENSMUST00000170267.1|Taar8c|ENSMUSG00000096204.1|trace amine-associated receptor 8C
mm10_v2_chr1_+_180101144_180101144	0.17076	Hoxa4	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr14_-_46390576_46390669	0.169018	Hoxa4	ENSMUST00000074077.5|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr2_-_13271419_13271437	0.167806	Hoxa4	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr15_+_10249560_10249577	0.167469	Hoxa4	ENSMUST00000134410.1|Prlr|ENSMUSG00000005268.14|prolactin receptor
mm10_v2_chr2_-_77519565_77519647	0.1652	Hoxa4	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr14_-_46390501_46390550	0.163802	Hoxa4	ENSMUST00000100676.2|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr12_+_52516077_52516077	0.160139	Hoxa4	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr13_-_102906046_102906111	0.159684	Hoxa4	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr11_+_83852135_83852242	0.159165	Hoxa4	ENSMUST00000146786.1|Hnf1b|ENSMUSG00000020679.5|HNF1 homeobox B
mm10_v2_chr8_+_4238733_4238767	0.158836	Hoxa4	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr10_+_87859481_87859492	0.158044	Hoxa4	ENSMUST00000121952.1|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr3_+_95164306_95164374	0.157433	Hoxa4	ENSMUST00000107217.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000168321.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr3_+_134236483_134236500	0.157058	Hoxa4	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr19_-_57197435_57197460	0.152563	Hoxa4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr10_+_127501707_127501726	0.147834	Hoxa4	ENSMUST00000035839.2|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3
mm10_v2_chr11_+_103966716_103966871	0.142869	Hoxa4	ENSMUST00000057921.3|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2 	ENSMUST00000063347.5|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2
mm10_v2_chr6_-_102464667_102464667	0.142714	Hoxa4	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr2_-_93849679_93849836	0.141819	Hoxa4	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr13_+_58807884_58807902	0.141535	Hoxa4	ENSMUST00000079828.5|Ntrk2|ENSMUSG00000055254.8|neurotrophic tyrosine kinase, receptor, type 2
mm10_v2_chr13_-_114458720_114458736	0.140293	Hoxa4	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr4_+_109978004_109978053	0.139189	Hoxa4	ENSMUST00000061187.3|Dmrta2|ENSMUSG00000047143.3|doublesex and mab-3 related transcription factor like family A2
mm10_v2_chr11_-_30986326_30986372	0.133959	Hoxa4	ENSMUST00000020553.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2 	ENSMUST00000101394.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2
mm10_v2_chr5_+_64812336_64812350	0.1314	Hoxa4	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr5_-_137314175_137314241	0.131229	Hoxa4	ENSMUST00000024119.9|Trip6|ENSMUSG00000023348.10|thyroid hormone receptor interactor 6
mm10_v2_chrX_-_112698642_112698657	0.128369	Hoxa4	ENSMUST00000039887.3|Pof1b|ENSMUSG00000034607.6|premature ovarian failure 1B
mm10_v2_chr12_+_38781093_38781129	0.125715	Hoxa4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr4_+_144893127_144893151	0.125676	Hoxa4	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr5_-_122614445_122614544	0.124562	Hoxa4	ENSMUST00000127220.1|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81 	ENSMUST00000031426.7|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81
mm10_v2_chr4_+_119814495_119814526	0.124544	Hoxa4	ENSMUST00000106307.2|Hivep3|ENSMUSG00000028634.10|human immunodeficiency virus type I enhancer binding protein 3
mm10_v2_chr1_-_23909687_23909706	0.12262	Hoxa4	ENSMUST00000129254.1|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr2_-_116065047_116065133	0.121136	Hoxa4	ENSMUST00000028639.6|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000102538.4|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr2_-_120154600_120154611	0.120676	Hoxa4	ENSMUST00000028755.7|Ehd4|ENSMUSG00000027293.7|EH-domain containing 4
mm10_v2_chr15_-_37458523_37458581	0.120032	Hoxa4	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr14_-_54409469_54409477	0.119469	Hoxa4	ENSMUST00000000984.4|Slc7a7|ENSMUSG00000000958.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm10_v2_chr15_-_37459327_37459380	0.117671	Hoxa4	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr6_+_97210689_97210728	0.115349	Hoxa4	ENSMUST00000044681.6|Arl6ip5|ENSMUSG00000035199.6|ADP-ribosylation factor-like 6 interacting protein 5
mm10_v2_chr8_-_67974567_67974596	0.112928	Hoxa4	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr18_+_37355271_37355271	0.112059	Hoxa4	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr6_+_72304592_72304623	0.11084	Hoxa4	ENSMUST00000183018.1|Sftpb|ENSMUSG00000056370.9|surfactant associated protein B
mm10_v2_chr12_+_38783455_38783482	0.110651	Hoxa4	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr19_+_31868754_31868787	0.107207	Hoxa4	ENSMUST00000075838.5|A1cf|ENSMUSG00000052595.6|APOBEC1 complementation factor
mm10_v2_chr3_+_96645579_96645608	0.107026	Hoxa4	ENSMUST00000119365.1|Itga10|ENSMUSG00000090210.1|integrin, alpha 10 	ENSMUST00000029744.5|Itga10|ENSMUSG00000090210.1|integrin, alpha 10
mm10_v2_chr13_-_102958084_102958173	0.1051	Hoxa4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr12_+_38783503_38783527	0.104712	Hoxa4	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_41564880_41564933	0.104026	Hoxa4	ENSMUST00000168086.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr1_+_74284930_74285072	0.102685	Hoxa4	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr18_-_42579652_42579790	0.10197	Hoxa4	ENSMUST00000054738.3|Gpr151|ENSMUSG00000042816.3|G protein-coupled receptor 151
mm10_v2_chr18_+_86711520_86711650	0.10143	Hoxa4	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr2_+_70474923_70474923	0.100294	Hoxa4	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr9_+_77636494_77636528	0.100042	Hoxa4	ENSMUST00000057781.7|Klhl31|ENSMUSG00000044938.8|kelch-like 31
mm10_v2_chr7_+_64185459_64185601	0.0985084	Hoxa4	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
mm10_v2_chr5_-_146220901_146220987	0.0976468	Hoxa4	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr16_-_36990449_36990467	0.0962	Hoxa4	ENSMUST00000075869.6|Fbxo40|ENSMUSG00000047746.8|F-box protein 40
mm10_v2_chr9_-_65885024_65885069	0.0936133	Hoxa4	ENSMUST00000122410.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000117083.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr11_-_21572193_21572211	0.0919971	Hoxa4	ENSMUST00000102874.4|Mdh1|ENSMUSG00000020321.9|malate dehydrogenase 1, NAD (soluble)
mm10_v2_chr11_-_121673103_121673153	0.0905407	Hoxa4	ENSMUST00000067399.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 	ENSMUST00000062654.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
mm10_v2_chr17_+_24470393_24470481	0.0900227	Hoxa4	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr1_+_180111339_180111339	0.0899526	Hoxa4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr3_-_122619442_122619553	0.089107	Hoxa4	ENSMUST00000162947.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr4_+_130107556_130107606	0.0865976	Hoxa4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr8_+_120488416_120488490	0.0816235	Hoxa4	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr6_+_56832059_56832160	0.0802578	Hoxa4	ENSMUST00000031795.7|Fkbp9|ENSMUSG00000029781.7|FK506 binding protein 9
mm10_v2_chr4_-_129378116_129378116	0.0790922	Hoxa4	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr17_-_84187939_84187954	0.0777823	Hoxa4	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chrX_-_20950597_20950613	0.0725709	Hoxa4	ENSMUST00000009550.7|Elk1|ENSMUSG00000009406.7|ELK1, member of ETS oncogene family
mm10_v2_chr4_-_134372529_134372561	0.0688977	Hoxa4	ENSMUST00000030643.2|Extl1|ENSMUSG00000028838.5|exostoses (multiple)-like 1
mm10_v2_chr4_-_3872105_3872105	0.067204	Hoxa4	ENSMUST00000105158.1|Mos|ENSMUSG00000078365.5|Moloney sarcoma oncogene
mm10_v2_chr14_+_79515618_79515694	0.067174	Hoxa4	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr2_-_65529275_65529404	0.0668632	Hoxa4	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr15_-_99820072_99820154	0.0658302	Hoxa4	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr14_+_46832127_46832151	0.0644076	Hoxa4	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr15_+_18818895_18818947	0.0637358	Hoxa4	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr3_+_116562965_116563004	0.0625335	Hoxa4	ENSMUST00000029573.5|Lrrc39|ENSMUSG00000027961.5|leucine rich repeat containing 39
mm10_v2_chr5_+_115429585_115429613	0.0611904	Hoxa4	ENSMUST00000150779.1|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr6_+_134981998_134982002	0.060795	Hoxa4	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr17_+_6007580_6007624	0.0605979	Hoxa4	ENSMUST00000115784.1|Synj2|ENSMUSG00000023805.10|synaptojanin 2 	ENSMUST00000115785.1|Synj2|ENSMUSG00000023805.10|synaptojanin 2
mm10_v2_chrX_+_7697131_7697187	0.0604032	Hoxa4	ENSMUST00000049896.6|Gpkow|ENSMUSG00000031148.8|G patch domain and KOW motifs
mm10_v2_chr7_-_34654342_34654398	0.0589407	Hoxa4	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr5_-_84417359_84417389	0.0581516	Hoxa4	ENSMUST00000113401.1|Epha5|ENSMUSG00000029245.10|Eph receptor A5
mm10_v2_chr9_-_49798905_49798931	0.0575993	Hoxa4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr8_+_106059562_106059623	0.0558779	Hoxa4	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr6_-_24168083_24168097	0.0551453	Hoxa4	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr6_+_29467718_29467764	0.0549704	Hoxa4	ENSMUST00000004396.6|Atp6v1f|ENSMUSG00000004285.6|ATPase, H+ transporting, lysosomal V1 subunit F
mm10_v2_chr11_+_94328242_94328261	0.0548327	Hoxa4	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr10_+_127421124_127421203	0.0545422	Hoxa4	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr13_+_63014934_63014934	0.0545335	Hoxa4	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr4_-_118180043_118180054	0.054291	Hoxa4	ENSMUST00000106406.2|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chrX_-_102252154_102252181	0.0540231	Hoxa4	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr9_-_110624361_110624439	0.0536483	Hoxa4	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr13_-_102905740_102905814	0.0534979	Hoxa4	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr2_+_31759932_31759989	0.0532595	Hoxa4	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr11_-_30268169_30268191	0.0523586	Hoxa4	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr1_-_74601345_74601402	0.0522473	Hoxa4	ENSMUST00000136078.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000132081.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000113721.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000027357.5|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
mm10_v2_chr16_+_37580137_37580153	0.0505609	Hoxa4	ENSMUST00000160847.1|Hgd|ENSMUSG00000022821.7|homogentisate 1, 2-dioxygenase
mm10_v2_chr19_-_57197377_57197417	0.0502559	Hoxa4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_+_55894508_55894534	0.0499981	Hoxa4	ENSMUST00000142291.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr17_+_24850654_24850683	0.0496744	Hoxa4	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr10_+_127420867_127420916	0.048922	Hoxa4	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr3_+_93442330_93442389	0.0485305	Hoxa4	ENSMUST00000064257.5|Tchh|ENSMUSG00000052415.5|trichohyalin
mm10_v2_chr4_-_116053825_116053876	0.0483469	Hoxa4	ENSMUST00000030475.1|Nsun4|ENSMUSG00000028706.8|NOL1/NOP2/Sun domain family, member 4
mm10_v2_chr9_+_72274966_72275013	0.0479872	Hoxa4	ENSMUST00000183410.1|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D
mm10_v2_chr5_-_137531204_137531297	0.0473139	Hoxa4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr18_+_23752333_23752401	0.0471945	Hoxa4	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr1_-_86110672_86110761	0.0439584	Hoxa4	ENSMUST00000155077.1|Htr2b|ENSMUSG00000026228.6|5-hydroxytryptamine (serotonin) receptor 2B
mm10_v2_chr6_+_106118924_106119006	0.0439574	Hoxa4	ENSMUST00000079416.5|Cntn4|ENSMUSG00000064293.8|contactin 4
mm10_v2_chr1_+_93478964_93479108	0.0405103	Hoxa4	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr17_+_45734506_45734630	0.039694	Hoxa4	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr7_+_45405960_45405960	0.0395376	Hoxa4	ENSMUST00000107774.1|Kcna7|ENSMUSG00000038201.9|potassium voltage-gated channel, shaker-related subfamily, member 7
mm10_v2_chr2_+_83644435_83644490	0.0392721	Hoxa4	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr17_-_43667015_43667163	0.0391959	Hoxa4	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr16_-_64786321_64786321	0.0385271	Hoxa4	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr13_-_78196373_78196440	0.0362005	Hoxa4	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr13_+_63015167_63015167	0.0356811	Hoxa4	ENSMUST00000021911.8|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr10_-_70655934_70655972	0.033488	Hoxa4	ENSMUST00000162144.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like 	ENSMUST00000162793.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr3_+_89459118_89459214	0.0332653	Hoxa4	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr8_-_45294854_45294863	0.0308244	Hoxa4	ENSMUST00000116473.2|Klkb1|ENSMUSG00000031640.9|kallikrein B, plasma 1
mm10_v2_chr14_-_79771305_79771318	0.0306458	Hoxa4	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr10_+_63457505_63457539	0.0295283	Hoxa4	ENSMUST00000105440.1|Ctnna3|ENSMUSG00000060843.5|catenin (cadherin associated protein), alpha 3
mm10_v2_chr3_+_5218546_5218561	0.0274195	Hoxa4	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr18_+_60963517_60963603	0.0271233	Hoxa4	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr19_-_28967794_28967852	0.0263874	Hoxa4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr17_+_24850515_24850591	0.0253861	Hoxa4	ENSMUST00000154363.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000169200.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr12_-_80760541_80760730	0.0237113	Hoxa4	ENSMUST00000073251.6|Ccdc177|ENSMUSG00000062961.6|coiled-coil domain containing 177
mm10_v2_chr6_+_29468068_29468113	0.0237002	Hoxa4	ENSMUST00000143101.1|Atp6v1f|ENSMUSG00000004285.6|ATPase, H+ transporting, lysosomal V1 subunit F
mm10_v2_chr12_-_27160498_27160633	0.0223452	Hoxa4	ENSMUST00000182592.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr4_-_118179946_118180035	0.0186514	Hoxa4	ENSMUST00000050288.8|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A 	ENSMUST00000106403.1|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr2_+_65930117_65930190	0.0166853	Hoxa4	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr18_+_86711059_86711110	0.0166815	Hoxa4	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr2_+_109917639_109917656	0.0143512	Hoxa4	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr18_-_79109391_79109510	0.0137901	Hoxa4	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr11_-_99322943_99322957	0.0123214	Hoxa4	ENSMUST00000038004.2|Krt25|ENSMUSG00000035831.2|keratin 25
mm10_v2_chr7_-_45052865_45052914	0.0115669	Hoxa4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr19_-_57197496_57197536	0.00933341	Hoxa4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr2_-_5676046_5676065	0.00774241	Hoxa4	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr12_-_27160311_27160476	0.00743527	Hoxa4	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr10_-_51631458_51631458	0.00672117	Hoxa4	ENSMUST00000020062.3|Gprc6a|ENSMUSG00000019905.7|G protein-coupled receptor, family C, group 6, member A
mm10_v2_chr10_-_79908891_79908936	0.00411265	Hoxa4	ENSMUST00000165684.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000164705.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000105378.2|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000170409.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16
mm10_v2_chr3_+_90654253_90654302	0.00357494	Hoxa4	ENSMUST00000079286.2|S100a7a|ENSMUSG00000063767.2|S100 calcium binding protein A7A
mm10_v2_chr3_-_146781351_146781431	0.0034393	Hoxa4	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr10_+_87859062_87859094	0.00342751	Hoxa4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr10_+_102158858_102158889	0.00302144	Hoxa4	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr5_+_30814722_30814776	0.00286944	Hoxa4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
