mm10_v2_chr6_+_71199827_71199888	4.32347	Hoxd11_Cdx1_Hoxc11	ENSMUST00000067492.7|Fabp1|ENSMUSG00000054422.7|fatty acid binding protein 1, liver
mm10_v2_chr4_+_11758147_11758220	1.05784	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr7_-_73537621_73537766	1.03203	Hoxd11_Cdx1_Hoxc11	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr15_-_78855517_78855536	0.722351	Hoxd11_Cdx1_Hoxc11	ENSMUST00000044584.4|Lgals2|ENSMUSG00000043501.4|lectin, galactose-binding, soluble 2
mm10_v2_chr3_-_72967854_72967869	0.718407	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167334.1|Sis|ENSMUSG00000027790.8|sucrase isomaltase (alpha-glucosidase)
mm10_v2_chr6_-_24168083_24168097	0.689975	Hoxd11_Cdx1_Hoxc11	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr17_-_36190121_36190287	0.643843	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097329.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000025312.6|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000102675.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3
mm10_v2_chr13_-_23914998_23915011	0.547648	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021769.8|Slc17a4|ENSMUSG00000021336.10|solute carrier family 17 (sodium phosphate), member 4 	ENSMUST00000110407.2|Slc17a4|ENSMUSG00000021336.10|solute carrier family 17 (sodium phosphate), member 4
mm10_v2_chr3_+_138313279_138313293	0.514133	Hoxd11_Cdx1_Hoxc11	ENSMUST00000013455.6|Adh6a|ENSMUSG00000053054.7|alcohol dehydrogenase 6A (class V) 	ENSMUST00000106247.1|Adh6a|ENSMUSG00000053054.7|alcohol dehydrogenase 6A (class V)
mm10_v2_chr18_+_33464163_33464163	0.481967	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097634.3|Gm10549|ENSMUSG00000073610.3|predicted gene 10549
mm10_v2_chrX_+_96455359_96455411	0.433712	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr16_-_56795823_56795899	0.38923	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023437.4|Gpr128|ENSMUSG00000022755.4|G protein-coupled receptor 128
mm10_v2_chr18_+_21072329_21072351	0.367376	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082235.4|Mep1b|ENSMUSG00000024313.7|meprin 1 beta
mm10_v2_chr9_-_21067093_21067093	0.360383	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115494.2|Zglp1|ENSMUSG00000079681.2|zinc finger, GATA-like protein 1
mm10_v2_chr9_+_62858085_62858138	0.352621	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr2_-_24048857_24048868	0.349602	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114497.1|Hnmt|ENSMUSG00000026986.8|histamine N-methyltransferase
mm10_v2_chr10_+_26822560_26822602	0.338141	Hoxd11_Cdx1_Hoxc11	ENSMUST00000135866.1|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr14_+_26894557_26894604	0.326411	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090337.4|Asb14|ENSMUSG00000021898.8|ankyrin repeat and SOCS box-containing 14 	ENSMUST00000165929.2|Asb14|ENSMUSG00000021898.8|ankyrin repeat and SOCS box-containing 14
mm10_v2_chr3_+_138415484_138415510	0.317715	Hoxd11_Cdx1_Hoxc11	ENSMUST00000161312.1|Adh4|ENSMUSG00000037797.8|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENSMUST00000013458.8|Adh4|ENSMUSG00000037797.8|alcohol dehydrogenase 4 (class II), pi polypeptide
mm10_v2_chr3_+_3634145_3634161	0.315587	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108394.1|Hnf4g|ENSMUSG00000017688.8|hepatocyte nuclear factor 4, gamma
mm10_v2_chr4_-_11981265_11981265	0.312266	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098260.2|Gm10604|ENSMUSG00000073995.2|predicted gene 10604
mm10_v2_chr4_+_33081505_33081505	0.297925	Hoxd11_Cdx1_Hoxc11	ENSMUST00000147889.1|Gabrr2|ENSMUSG00000023267.4|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm10_v2_chr11_-_100146120_100146120	0.286772	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007317.7|Krt19|ENSMUSG00000020911.8|keratin 19
mm10_v2_chr8_+_69902178_69902194	0.270505	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050373.5|Tssk6|ENSMUSG00000047654.5|testis-specific serine kinase 6
mm10_v2_chr6_-_122340499_122340510	0.269114	Hoxd11_Cdx1_Hoxc11	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr17_-_91092715_91092822	0.262199	Hoxd11_Cdx1_Hoxc11	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr3_-_144932523_144932536	0.250136	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098549.3|AI747448|ENSMUSG00000074195.3|expressed sequence AI747448
mm10_v2_chr11_+_117484368_117484368	0.248559	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092394.3|Gm11733|ENSMUSG00000069588.3|predicted gene 11733
mm10_v2_chr7_-_126649556_126649580	0.247251	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084587.1|2510046G10Rik|ENSMUSG00000066175.1|RIKEN cDNA 2510046G10 gene
mm10_v2_chr7_-_135528645_135528661	0.242615	Hoxd11_Cdx1_Hoxc11	ENSMUST00000053716.7|Clrn3|ENSMUSG00000050866.7|clarin 3
mm10_v2_chr17_-_31144271_31144288	0.236973	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024826.7|Tff2|ENSMUSG00000024028.7|trefoil factor 2 (spasmolytic protein 1)
mm10_v2_chr1_-_128328311_128328326	0.228422	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073490.6|Lct|ENSMUSG00000026354.8|lactase
mm10_v2_chr11_+_96323253_96323326	0.217774	Hoxd11_Cdx1_Hoxc11	ENSMUST00000093944.3|Hoxb3|ENSMUSG00000048763.5|homeobox B3
mm10_v2_chr8_-_45294854_45294863	0.21774	Hoxd11_Cdx1_Hoxc11	ENSMUST00000116473.2|Klkb1|ENSMUSG00000031640.9|kallikrein B, plasma 1
mm10_v2_chr7_-_19023538_19023546	0.210777	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036018.5|Foxa3|ENSMUSG00000040891.5|forkhead box A3
mm10_v2_chr10_+_42583787_42583838	0.208338	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105497.1|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1 	ENSMUST00000144806.1|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr3_-_49757257_49757316	0.200108	Hoxd11_Cdx1_Hoxc11	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr6_+_78380700_78380715	0.196407	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101272.1|Reg3a|ENSMUSG00000079516.1|regenerating islet-derived 3 alpha
mm10_v2_chr2_-_103283760_103283802	0.196204	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111174.1|Ehf|ENSMUSG00000012350.9|ets homologous factor
mm10_v2_chr7_+_123462274_123462296	0.191254	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033023.3|Aqp8|ENSMUSG00000030762.5|aquaporin 8
mm10_v2_chr8_+_57320975_57320992	0.188154	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040104.3|Hand2|ENSMUSG00000038193.3|heart and neural crest derivatives expressed transcript 2
mm10_v2_chr6_+_83086365_83086365	0.187555	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041265.2|Lbx2|ENSMUSG00000034968.2|ladybird homeobox homolog 2 (Drosophila)
mm10_v2_chr7_-_19677941_19677952	0.182624	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142352.1|Apoc2|ENSMUSG00000002992.10|apolipoprotein C-II
mm10_v2_chr2_-_18048784_18048822	0.181068	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr7_-_29906087_29906137	0.174458	Hoxd11_Cdx1_Hoxc11	ENSMUST00000053521.8|Zfp27|ENSMUSG00000062040.8|zinc finger protein 27
mm10_v2_chr10_-_60938123_60938142	0.173575	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036304.3|Pldi|ENSMUSG00000037247.3|polymorphic derived intron containing
mm10_v2_chr9_+_43310763_43310806	0.169995	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034511.5|Trim29|ENSMUSG00000032013.5|tripartite motif-containing 29
mm10_v2_chr14_+_66868850_66868850	0.165992	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100453.1|Gm5464|ENSMUSG00000075553.1|predicted gene 5464
mm10_v2_chr1_+_59256906_59256907	0.159889	Hoxd11_Cdx1_Hoxc11	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr15_+_25773985_25774042	0.159601	Hoxd11_Cdx1_Hoxc11	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr11_-_109298066_109298079	0.157597	Hoxd11_Cdx1_Hoxc11	ENSMUST00000106706.1|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr7_-_142661858_142661880	0.145532	Hoxd11_Cdx1_Hoxc11	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr17_-_31129602_31129646	0.138957	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024827.4|Tff3|ENSMUSG00000024029.4|trefoil factor 3, intestinal
mm10_v2_chr13_-_3945349_3945349	0.138645	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058610.7|Ucn3|ENSMUSG00000044988.7|urocortin 3
mm10_v2_chr7_+_25306085_25306157	0.13826	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119703.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145 	ENSMUST00000108409.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145
mm10_v2_chr8_-_105943382_105943407	0.13796	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038896.7|Lcat|ENSMUSG00000035237.7|lecithin cholesterol acyltransferase
mm10_v2_chr6_+_125215551_125215591	0.134502	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr1_-_144177259_144177372	0.118971	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr18_-_32036941_32037019	0.118531	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134663.1|Myo7b|ENSMUSG00000024388.10|myosin VIIB
mm10_v2_chr6_+_40628824_40628839	0.118419	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071535.6|Mgam|ENSMUSG00000068587.6|maltase-glucoamylase
mm10_v2_chr11_-_109298121_109298142	0.116909	Hoxd11_Cdx1_Hoxc11	ENSMUST00000020920.3|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr6_-_13839916_13839942	0.11531	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr7_-_119459266_119459280	0.114797	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033255.5|Gp2|ENSMUSG00000030954.9|glycoprotein 2 (zymogen granule membrane)
mm10_v2_chr19_-_7341848_7341863	0.11276	Hoxd11_Cdx1_Hoxc11	ENSMUST00000171393.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr18_+_37655891_37655915	0.11048	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr15_+_81936753_81936839	0.109234	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr5_-_73256555_73256636	0.107754	Hoxd11_Cdx1_Hoxc11	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr9_-_8042785_8042882	0.106403	Hoxd11_Cdx1_Hoxc11	ENSMUST00000065291.1|9230110C19Rik|ENSMUSG00000053070.4|RIKEN cDNA 9230110C19 gene
mm10_v2_chr19_+_53529100_53529109	0.105487	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr15_+_101473472_101473478	0.105316	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088049.3|Krt86|ENSMUSG00000067614.4|keratin 86
mm10_v2_chrX_+_141475385_141475468	0.102391	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112931.1|Col4a5|ENSMUSG00000031274.10|collagen, type IV, alpha 5 	ENSMUST00000112930.1|Col4a5|ENSMUSG00000031274.10|collagen, type IV, alpha 5
mm10_v2_chrX_-_7319291_7319358	0.10158	Hoxd11_Cdx1_Hoxc11	ENSMUST00000128319.1|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr19_-_7341792_7341829	0.0953854	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr5_-_6876523_6876523	0.0950379	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164784.1|Zfp804b|ENSMUSG00000092094.1|zinc finger protein 804B
mm10_v2_chr5_-_25100624_25100657	0.0934704	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr3_+_103575231_103575255	0.0930528	Hoxd11_Cdx1_Hoxc11	ENSMUST00000121834.1|Syt6|ENSMUSG00000027849.12|synaptotagmin VI
mm10_v2_chrX_+_36195938_36195946	0.0916561	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048067.3|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr7_+_131032061_131032076	0.0906292	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084509.3|Dmbt1|ENSMUSG00000047517.9|deleted in malignant brain tumors 1
mm10_v2_chrX_+_106920618_106920632	0.0895148	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060576.7|Lpar4|ENSMUSG00000049929.7|lysophosphatidic acid receptor 4
mm10_v2_chr4_-_141825997_141826160	0.08894	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102481.3|Cela2a|ENSMUSG00000058579.5|chymotrypsin-like elastase family, member 2A
mm10_v2_chr2_+_74721978_74722074	0.0886393	Hoxd11_Cdx1_Hoxc11	ENSMUST00000047904.3|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chrX_+_36195968_36195993	0.0877978	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115256.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr10_+_5639210_5639225	0.0864824	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019906.4|Vip|ENSMUSG00000019772.4|vasoactive intestinal polypeptide
mm10_v2_chr17_+_71019548_71019568	0.086158	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073211.5|Myom1|ENSMUSG00000024049.8|myomesin 1 	ENSMUST00000179759.1|Myom1|ENSMUSG00000024049.8|myomesin 1
mm10_v2_chr19_-_50678642_50678702	0.08601	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr9_-_123678873_123678885	0.0859066	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chrX_+_36195904_36195932	0.0853752	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115258.2|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr13_-_101692624_101692647	0.084688	Hoxd11_Cdx1_Hoxc11	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr11_-_109298090_109298118	0.0842753	Hoxd11_Cdx1_Hoxc11	ENSMUST00000106704.2|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chrX_+_36195950_36195959	0.0823322	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115257.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr17_-_15826521_15826590	0.0815158	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr2_-_26122769_26122838	0.0812903	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140993.1|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing 	ENSMUST00000028300.5|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr3_+_66985680_66985692	0.0812434	Hoxd11_Cdx1_Hoxc11	ENSMUST00000065047.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr17_-_90455872_90456026	0.0789689	Hoxd11_Cdx1_Hoxc11	ENSMUST00000174337.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000172466.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr9_-_21989427_21989456	0.0770541	Hoxd11_Cdx1_Hoxc11	ENSMUST00000045726.6|Rgl3|ENSMUSG00000040146.8|ral guanine nucleotide dissociation stimulator-like 3
mm10_v2_chr17_-_51826562_51826601	0.0768183	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr17_-_43502773_43502812	0.0765518	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024707.8|Mep1a|ENSMUSG00000023914.10|meprin 1 alpha 	ENSMUST00000117137.1|Mep1a|ENSMUSG00000023914.10|meprin 1 alpha
mm10_v2_chr9_-_39604124_39604403	0.0736386	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042485.4|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984 	ENSMUST00000141370.1|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984
mm10_v2_chr15_-_42676967_42676978	0.0735964	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chr2_+_58567360_58567408	0.0734607	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071543.5|Upp2|ENSMUSG00000026839.10|uridine phosphorylase 2
mm10_v2_chr14_+_20674311_20674371	0.0733727	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048657.8|Sec24c|ENSMUSG00000039367.9|Sec24 related gene family, member C (S. cerevisiae)
mm10_v2_chr10_+_119992916_119992958	0.0726824	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr14_-_47189406_47189419	0.072262	Hoxd11_Cdx1_Hoxc11	ENSMUST00000089959.6|Gch1|ENSMUSG00000037580.9|GTP cyclohydrolase 1
mm10_v2_chrX_+_164140447_164140495	0.0713558	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073973.4|Ace2|ENSMUSG00000015405.9|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm10_v2_chr3_+_103575275_103575286	0.0711784	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090697.4|Syt6|ENSMUSG00000027849.12|synaptotagmin VI
mm10_v2_chr4_+_31964081_31964263	0.0711363	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037607.4|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000080933.6|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108183.1|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108184.2|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7
mm10_v2_chr2_+_145785980_145786152	0.070459	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr4_+_20008357_20008451	0.0657987	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117632.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein 	ENSMUST00000098244.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein
mm10_v2_chr2_+_20737306_20737321	0.0654405	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr7_+_45062429_45062505	0.0654049	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107830.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000003513.3|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000107829.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000150609.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein
mm10_v2_chr18_-_37020679_37020679	0.0648949	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097612.2|Gm10545|ENSMUSG00000073594.2|predicted gene 10545
mm10_v2_chr11_+_97798995_97799021	0.061807	Hoxd11_Cdx1_Hoxc11	ENSMUST00000143571.1|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr18_-_6490808_6490869	0.0605745	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028100.6|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila) 	ENSMUST00000050542.5|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr6_-_12749193_12749253	0.0603541	Hoxd11_Cdx1_Hoxc11	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chr18_-_3281752_3281778	0.0601721	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140332.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000147138.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr11_-_5542177_5542219	0.059635	Hoxd11_Cdx1_Hoxc11	ENSMUST00000020776.4|Ccdc117|ENSMUSG00000020482.4|coiled-coil domain containing 117
mm10_v2_chr6_+_8259288_8259312	0.0595983	Hoxd11_Cdx1_Hoxc11	ENSMUST00000159335.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr17_-_35910032_35910076	0.0584351	Hoxd11_Cdx1_Hoxc11	ENSMUST00000141662.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000056034.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000077494.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000149277.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000061052.5|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr11_-_109472611_109472688	0.0581773	Hoxd11_Cdx1_Hoxc11	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr11_-_99244058_99244136	0.0581418	Hoxd11_Cdx1_Hoxc11	ENSMUST00000103132.3|Krt222|ENSMUSG00000035849.8|keratin 222 	ENSMUST00000038214.6|Krt222|ENSMUSG00000035849.8|keratin 222
mm10_v2_chr13_-_98890974_98891035	0.0573114	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179301.1|Tnpo1|ENSMUSG00000009470.10|transportin 1 	ENSMUST00000179271.1|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chrX_-_105928547_105928583	0.0569043	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101305.2|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr9_-_123678782_123678850	0.0566612	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr6_+_95117740_95117880	0.0557529	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr7_-_119895446_119895543	0.0540413	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098080.2|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr14_-_66868572_66868688	0.0526834	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr9_+_21835506_21835516	0.0519988	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058777.6|Gm6484|ENSMUSG00000047822.7|predicted gene 6484
mm10_v2_chr10_-_116896879_116896956	0.0513708	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048229.7|Myrfl|ENSMUSG00000034057.7|myelin regulatory factor-like
mm10_v2_chr2_-_116067391_116067444	0.0512961	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr7_-_45062393_45062436	0.0509381	Hoxd11_Cdx1_Hoxc11	ENSMUST00000129101.1|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm10_v2_chr16_-_32877723_32877766	0.0509243	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119810.1|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr17_+_71019503_71019523	0.0503604	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024847.7|Myom1|ENSMUSG00000024049.8|myomesin 1
mm10_v2_chr5_+_90367204_90367204	0.0501431	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr11_-_97700327_97700497	0.0495779	Hoxd11_Cdx1_Hoxc11	ENSMUST00000018681.7|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chr6_-_99044414_99044459	0.049189	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr5_+_145204523_145204668	0.0484152	Hoxd11_Cdx1_Hoxc11	ENSMUST00000085671.3|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5 	ENSMUST00000031601.7|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5
mm10_v2_chr2_+_65930117_65930190	0.0479161	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr7_-_45061706_45061740	0.0474015	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107832.1|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm10_v2_chr1_-_175688353_175688353	0.0470563	Hoxd11_Cdx1_Hoxc11	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr8_+_109990430_109990506	0.0469148	Hoxd11_Cdx1_Hoxc11	ENSMUST00000001720.7|Tat|ENSMUSG00000001670.7|tyrosine aminotransferase 	ENSMUST00000143741.1|Tat|ENSMUSG00000001670.7|tyrosine aminotransferase
mm10_v2_chr1_-_157256682_157256701	0.0468195	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr2_+_116900152_116900216	0.0467125	Hoxd11_Cdx1_Hoxc11	ENSMUST00000126467.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000128305.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000155323.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene
mm10_v2_chr8_-_70527645_70527783	0.0455671	Hoxd11_Cdx1_Hoxc11	ENSMUST00000132867.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr9_+_121950988_121951044	0.0439927	Hoxd11_Cdx1_Hoxc11	ENSMUST00000043011.7|Fam198a|ENSMUSG00000038233.8|family with sequence similarity 198, member A
mm10_v2_chr1_+_166130238_166130424	0.0439141	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060833.7|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane) 	ENSMUST00000166159.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr10_+_45577811_45577914	0.0426247	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037044.6|Hace1|ENSMUSG00000038822.9|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm10_v2_chr11_+_76904513_76904569	0.0419972	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072633.3|Tmigd1|ENSMUSG00000020839.10|transmembrane and immunoglobulin domain containing 1
mm10_v2_chr5_+_107497762_107497802	0.0414165	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152474.1|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene 	ENSMUST00000060553.7|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr11_-_19018714_19018828	0.0408725	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177417.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr3_+_5218546_5218561	0.0402592	Hoxd11_Cdx1_Hoxc11	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr2_-_79908428_79908438	0.0394444	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr9_-_101198999_101199080	0.0383668	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr4_+_144892813_144892835	0.0381862	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr6_-_112947246_112947277	0.0376285	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr15_-_79062866_79062941	0.0368143	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr11_+_29463735_29463888	0.0366685	Hoxd11_Cdx1_Hoxc11	ENSMUST00000155854.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr3_-_96220880_96220899	0.0364309	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chr15_+_100761741_100761797	0.0358971	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr1_-_36244245_36244320	0.0357605	Hoxd11_Cdx1_Hoxc11	ENSMUST00000046875.7|Uggt1|ENSMUSG00000037470.8|UDP-glucose glycoprotein glucosyltransferase 1
mm10_v2_chr2_-_114013619_114013638	0.0349805	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090275.4|Gjd2|ENSMUSG00000068615.4|gap junction protein, delta 2
mm10_v2_chr9_-_58102272_58102305	0.0343306	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042205.6|Ccdc33|ENSMUSG00000037716.8|coiled-coil domain containing 33
mm10_v2_chr2_+_71786923_71786978	0.0343234	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr3_+_5218516_5218544	0.0340853	Hoxd11_Cdx1_Hoxc11	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr11_-_77607812_77607860	0.0330072	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058496.7|Taok1|ENSMUSG00000017291.7|TAO kinase 1
mm10_v2_chr1_-_152625212_152625220	0.0326261	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr3_+_62419668_62419668	0.0326228	Hoxd11_Cdx1_Hoxc11	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr3_+_134236483_134236500	0.0313986	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr16_+_45224315_45224346	0.0309884	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr7_-_31051431_31051488	0.0306235	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr9_-_42124276_42124333	0.0303733	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr18_+_36939178_36939318	0.0302009	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115662.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr1_-_56969864_56969875	0.029955	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177424.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr5_-_101665195_101665226	0.0299475	Hoxd11_Cdx1_Hoxc11	ENSMUST00000044125.8|Nkx6-1|ENSMUSG00000035187.8|NK6 homeobox 1
mm10_v2_chr6_+_80018877_80018945	0.0296537	Hoxd11_Cdx1_Hoxc11	ENSMUST00000147663.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000128718.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000126005.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000133918.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4
mm10_v2_chr2_+_36230426_36230491	0.0289386	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr18_-_3281712_3281747	0.0286441	Hoxd11_Cdx1_Hoxc11	ENSMUST00000182204.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154705.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000182833.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000151084.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr10_-_105574435_105574451	0.0274805	Hoxd11_Cdx1_Hoxc11	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr10_-_13324160_13324242	0.0274351	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr7_+_90380646_90380646	0.0268162	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098310.2|Sytl2|ENSMUSG00000030616.8|synaptotagmin-like 2
mm10_v2_chr1_+_6734827_6734874	0.0267051	Hoxd11_Cdx1_Hoxc11	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chrX_+_20364481_20364616	0.0260103	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033372.6|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115391.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115387.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human)
mm10_v2_chr2_-_79908389_79908403	0.0253785	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr9_-_58102225_58102269	0.0246751	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119665.1|Ccdc33|ENSMUSG00000037716.8|coiled-coil domain containing 33
mm10_v2_chr2_+_110721587_110721619	0.024533	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111017.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr2_+_22622183_22622205	0.0238765	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr6_-_122340525_122340561	0.0237808	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr3_+_5218589_5218614	0.0237183	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr2_-_29787622_29787680	0.0233597	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177467.1|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli) 	ENSMUST00000113807.3|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm10_v2_chr17_+_84956718_84956745	0.0230284	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr2_-_116064721_116064749	0.0229735	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110906.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr1_+_159737510_159737510	0.0228991	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111669.3|Tnr|ENSMUSG00000015829.8|tenascin R
mm10_v2_chr14_-_20496780_20496901	0.0221296	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr13_-_22035589_22035643	0.0218843	Hoxd11_Cdx1_Hoxc11	ENSMUST00000091742.4|Hist1h2ah|ENSMUSG00000069302.4|histone cluster 1, H2ah
mm10_v2_chr3_+_108591279_108591414	0.0212222	Hoxd11_Cdx1_Hoxc11	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr3_+_84666192_84666288	0.0207342	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107682.1|Tmem154|ENSMUSG00000056498.7|transmembrane protein 154
mm10_v2_chr13_+_22035821_22035848	0.0202491	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110455.2|Hist1h2bk|ENSMUSG00000062727.3|histone cluster 1, H2bk
mm10_v2_chrX_-_75578188_75578247	0.0197275	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr2_-_18048347_18048449	0.0196439	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr4_+_136284708_136284775	0.0195238	Hoxd11_Cdx1_Hoxc11	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr12_-_31950535_31950560	0.0191974	Hoxd11_Cdx1_Hoxc11	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr6_+_15196949_15197102	0.0191131	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr6_-_124965207_124965243	0.0189336	Hoxd11_Cdx1_Hoxc11	ENSMUST00000148485.1|Cops7a|ENSMUSG00000030127.9|COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
mm10_v2_chr5_-_148552783_148552843	0.0188633	Hoxd11_Cdx1_Hoxc11	ENSMUST00000079324.7|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3 	ENSMUST00000164904.1|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3
mm10_v2_chr7_-_45459839_45459884	0.0187868	Hoxd11_Cdx1_Hoxc11	ENSMUST00000094434.4|Ftl1|ENSMUSG00000050708.8|ferritin light chain 1
mm10_v2_chr7_-_127208423_127208504	0.0186117	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120705.1|Tbc1d10b|ENSMUSG00000042492.6|TBC1 domain family, member 10b
mm10_v2_chrX_+_139563316_139563339	0.0183413	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113027.1|Rnf128|ENSMUSG00000031438.5|ring finger protein 128
mm10_v2_chr19_-_6067785_6067865	0.0176584	Hoxd11_Cdx1_Hoxc11	ENSMUST00000162575.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000159084.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161718.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000162810.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000025713.5|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000113543.2|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161528.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2
mm10_v2_chr2_-_66410064_66410134	0.0169877	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr11_-_21370452_21370485	0.0167537	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chrX_+_82948861_82948915	0.0153502	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr1_-_175491130_175491130	0.0149212	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027812.5|Rgs7|ENSMUSG00000026527.8|regulator of G protein signaling 7
mm10_v2_chr2_-_120072523_120072523	0.0148097	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110756.1|Sptbn5|ENSMUSG00000074899.4|spectrin beta, non-erythrocytic 5
mm10_v2_chr12_+_108792946_108792988	0.0142475	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr4_+_62286441_62286516	0.0134042	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084530.2|Slc31a2|ENSMUSG00000066152.5|solute carrier family 31, member 2
mm10_v2_chr1_+_89454769_89454885	0.012859	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr9_-_8134294_8134364	0.0126225	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037397.6|AK129341|ENSMUSG00000040729.6|cDNA sequence AK129341
mm10_v2_chr1_+_166130467_166130479	0.0118961	Hoxd11_Cdx1_Hoxc11	ENSMUST00000166860.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr2_-_140671400_140671427	0.0118807	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056760.3|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr3_+_88965812_88965812	0.0115093	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090933.4|Ash1l|ENSMUSG00000028053.7|ash1 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr1_-_120270253_120270423	0.0114414	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112639.1|Steap3|ENSMUSG00000026389.10|STEAP family member 3
mm10_v2_chr10_+_101681487_101681662	0.0112562	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179929.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000127504.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr11_-_103267405_103267472	0.0111524	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr5_+_137641334_137641437	0.0111047	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr5_+_32611171_32611245	0.0110082	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr4_+_136284658_136284686	0.010317	Hoxd11_Cdx1_Hoxc11	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr2_+_84988194_84988215	0.0102923	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028466.5|Prg3|ENSMUSG00000027072.7|proteoglycan 3
mm10_v2_chr4_+_35152056_35152056	0.00966965	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058595.6|Ifnk|ENSMUSG00000042993.6|interferon kappa
mm10_v2_chr8_+_40307458_40307458	0.00964963	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr19_-_38125258_38125321	0.00932606	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025951.6|Rbp4|ENSMUSG00000024990.6|retinol binding protein 4, plasma
mm10_v2_chr10_-_42583628_42583639	0.00928031	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr9_-_44799179_44799307	0.00908712	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114705.1|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25 	ENSMUST00000002100.7|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25
mm10_v2_chr11_-_120624973_120625014	0.00885254	Hoxd11_Cdx1_Hoxc11	ENSMUST00000106183.2|Sirt7|ENSMUSG00000025138.8|sirtuin 7 	ENSMUST00000080202.5|Sirt7|ENSMUSG00000025138.8|sirtuin 7
mm10_v2_chr3_+_96221111_96221134	0.00861933	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr1_+_160978576_160978606	0.00848383	Hoxd11_Cdx1_Hoxc11	ENSMUST00000064725.5|Serpinc1|ENSMUSG00000026715.7|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm10_v2_chr4_-_49408042_49408151	0.00828626	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081541.2|Acnat2|ENSMUSG00000060317.3|acyl-coenzyme A amino acid N-acyltransferase 2
mm10_v2_chr5_+_107497718_107497759	0.00803596	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr11_-_109473220_109473294	0.00791193	Hoxd11_Cdx1_Hoxc11	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr19_+_29945782_29945799	0.00739922	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025724.8|Il33|ENSMUSG00000024810.10|interleukin 33
mm10_v2_chr1_+_180109192_180109265	0.00730629	Hoxd11_Cdx1_Hoxc11	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr15_+_59315088_59315128	0.0072202	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100640.4|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr16_-_91728701_91728802	0.0071763	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr5_+_31054821_31054955	0.00708336	Hoxd11_Cdx1_Hoxc11	ENSMUST00000174367.1|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENSMUST00000170329.1|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENSMUST00000031049.6|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm10_v2_chr16_-_4880284_4880315	0.00701557	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr1_-_89933290_89933290	0.0069222	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr4_-_14826582_14826589	0.00610772	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr15_-_81104999_81105083	0.0060314	Hoxd11_Cdx1_Hoxc11	ENSMUST00000109579.2|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr10_-_25200110_25200178	0.00570017	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr18_-_35498856_35498925	0.00544565	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr2_+_57997884_57997884	0.00453272	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112616.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 	ENSMUST00000166729.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
mm10_v2_chr1_-_176213934_176213943	0.00424788	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111167.1|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5
mm10_v2_chr2_+_29965560_29965717	0.00423418	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113717.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113719.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000100225.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113741.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000095083.4|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000046257.7|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1
mm10_v2_chr16_-_55838827_55838899	0.00406692	Hoxd11_Cdx1_Hoxc11	ENSMUST00000096026.2|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000036273.6|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000114457.1|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
mm10_v2_chr5_+_33018816_33018865	0.00392737	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr3_+_83007850_83007868	0.00372378	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048486.7|Fgg|ENSMUSG00000033860.8|fibrinogen gamma chain
mm10_v2_chr11_-_101894355_101894374	0.00369465	Hoxd11_Cdx1_Hoxc11	ENSMUST00000057054.7|Meox1|ENSMUSG00000001493.9|mesenchyme homeobox 1
mm10_v2_chrX_+_160768179_160768183	0.00321943	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112368.2|Rs1|ENSMUSG00000031293.7|retinoschisis (X-linked, juvenile) 1 (human)
mm10_v2_chr13_-_56895737_56895793	0.00317275	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr3_-_89349939_89349959	0.00303099	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107446.1|Adam15|ENSMUSG00000028041.11|a disintegrin and metallopeptidase domain 15 (metargidin)
mm10_v2_chr7_+_30565410_30565432	0.00284254	Hoxd11_Cdx1_Hoxc11	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chr12_+_55836365_55836408	0.00265106	Hoxd11_Cdx1_Hoxc11	ENSMUST00000059250.6|Brms1l|ENSMUSG00000012076.7|breast cancer metastasis-suppressor 1-like
mm10_v2_chr1_-_72536930_72536999	0.00226527	Hoxd11_Cdx1_Hoxc11	ENSMUST00000047786.5|March4|ENSMUSG00000039372.5|membrane-associated ring finger (C3HC4) 4
mm10_v2_chr4_+_99030946_99030961	0.00222044	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030280.6|Angptl3|ENSMUSG00000028553.6|angiopoietin-like 3
mm10_v2_chr2_-_140671462_140671476	0.00154381	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr4_-_154636831_154636873	0.00146496	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr6_-_139501907_139501918	0.00134489	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170650.1|Rergl|ENSMUSG00000092164.1|RERG/RAS-like
mm10_v2_chr1_-_172027269_172027313	0.00120852	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr10_-_30655859_30655868	0.00111933	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr11_-_17211504_17211573	0.00110066	Hoxd11_Cdx1_Hoxc11	ENSMUST00000020317.7|Pno1|ENSMUSG00000020116.7|partner of NOB1 homolog (S. cerevisiae)
mm10_v2_chrX_-_162565514_162565617	0.000683648	Hoxd11_Cdx1_Hoxc11	ENSMUST00000154424.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr6_-_144209558_144209647	0.000110191	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
