mm10_v2_chr9_-_70421533_70421592	5.06256	Pitx2_Otx2	ENSMUST00000034742.6|Ccnb2|ENSMUSG00000032218.6|cyclin B2
mm10_v2_chr17_+_35861318_35861339	4.57615	Pitx2_Otx2	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr4_-_117182623_117182639	4.57335	Pitx2_Otx2	ENSMUST00000065896.2|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr17_+_35861343_35861486	4.53746	Pitx2_Otx2	ENSMUST00000172931.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr11_-_60811228_60811265	4.45029	Pitx2_Otx2	ENSMUST00000018744.8|Shmt1|ENSMUSG00000020534.8|serine hydroxymethyltransferase 1 (soluble)
mm10_v2_chr6_-_88898664_88898780	4.30391	Pitx2_Otx2	ENSMUST00000058011.6|Mcm2|ENSMUSG00000002870.7|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm10_v2_chr4_+_141368116_141368220	3.30304	Pitx2_Otx2	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr18_-_74207771_74207818	3.25376	Pitx2_Otx2	ENSMUST00000040188.8|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1 	ENSMUST00000177604.1|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1
mm10_v2_chr14_-_50795689_50795728	3.11183	Pitx2_Otx2	ENSMUST00000095932.3|Ccnb1ip1|ENSMUSG00000071470.3|cyclin B1 interacting protein 1
mm10_v2_chr1_+_135232045_135232110	2.97241	Pitx2_Otx2	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr14_-_47418407_47418407	2.88439	Pitx2_Otx2	ENSMUST00000043296.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr16_+_31422268_31422280	2.87578	Pitx2_Otx2	ENSMUST00000089759.2|Bdh1|ENSMUSG00000046598.8|3-hydroxybutyrate dehydrogenase, type 1
mm10_v2_chr19_-_41896132_41896155	2.79841	Pitx2_Otx2	ENSMUST00000038677.3|Rrp12|ENSMUSG00000035049.3|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm10_v2_chr14_-_47411666_47411666	2.79564	Pitx2_Otx2	ENSMUST00000111778.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr15_+_76879232_76879259	2.72666	Pitx2_Otx2	ENSMUST00000023179.5|Zfp7|ENSMUSG00000033669.7|zinc finger protein 7
mm10_v2_chr5_+_110330697_110330767	2.70926	Pitx2_Otx2	ENSMUST00000112481.1|Pole|ENSMUSG00000007080.8|polymerase (DNA directed), epsilon
mm10_v2_chr8_+_71406003_71406050	2.66892	Pitx2_Otx2	ENSMUST00000119976.1|Ankle1|ENSMUSG00000046295.7|ankyrin repeat and LEM domain containing 1 	ENSMUST00000120725.1|Ankle1|ENSMUSG00000046295.7|ankyrin repeat and LEM domain containing 1
mm10_v2_chr19_+_34922351_34922404	2.51597	Pitx2_Otx2	ENSMUST00000087341.5|Kif20b|ENSMUSG00000024795.10|kinesin family member 20B
mm10_v2_chr3_-_36571952_36572150	2.4825	Pitx2_Otx2	ENSMUST00000029270.3|Ccna2|ENSMUSG00000027715.3|cyclin A2
mm10_v2_chr6_-_113600645_113600715	2.46256	Pitx2_Otx2	ENSMUST00000035870.4|Fancd2os|ENSMUSG00000033963.10|Fancd2 opposite strand
mm10_v2_chr2_+_150909565_150909642	2.44379	Pitx2_Otx2	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr2_+_181680284_181680332	2.4257	Pitx2_Otx2	ENSMUST00000103042.3|Tcea2|ENSMUSG00000059540.9|transcription elongation factor A (SII), 2
mm10_v2_chr18_+_34736359_34736359	2.39214	Pitx2_Otx2	ENSMUST00000105038.2|Gm3550|ENSMUSG00000078240.2|predicted gene 3550
mm10_v2_chr15_-_82244716_82244755	2.36343	Pitx2_Otx2	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr7_+_19518731_19518731	2.31765	Pitx2_Otx2	ENSMUST00000078908.4|Nkpd1|ENSMUSG00000060621.4|NTPase, KAP family P-loop domain containing 1
mm10_v2_chr18_+_34751803_34751912	2.28245	Pitx2_Otx2	ENSMUST00000181453.1|2010110K18Rik|ENSMUSG00000097755.1|RIKEN cDNA 2010110K18 gene 	ENSMUST00000181641.1|2010110K18Rik|ENSMUSG00000097755.1|RIKEN cDNA 2010110K18 gene
mm10_v2_chr7_-_34812677_34812693	2.27941	Pitx2_Otx2	ENSMUST00000078686.6|Chst8|ENSMUSG00000060402.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm10_v2_chr10_+_7667503_7667558	2.26672	Pitx2_Otx2	ENSMUST00000040135.8|Nup43|ENSMUSG00000040034.9|nucleoporin 43
mm10_v2_chr10_+_128238034_128238069	2.24672	Pitx2_Otx2	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr14_+_65806066_65806232	2.18503	Pitx2_Otx2	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr5_-_135251209_135251242	2.17923	Pitx2_Otx2	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr17_-_25727364_25727426	2.16926	Pitx2_Otx2	ENSMUST00000170070.1|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18 	ENSMUST00000048054.7|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18
mm10_v2_chr9_+_103305156_103305255	2.15984	Pitx2_Otx2	ENSMUST00000035164.3|Topbp1|ENSMUSG00000032555.3|topoisomerase (DNA) II binding protein 1
mm10_v2_chr15_+_80948484_80948549	2.15596	Pitx2_Otx2	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr11_+_51619731_51619813	2.11873	Pitx2_Otx2	ENSMUST00000127405.1|Nhp2|ENSMUSG00000001056.3|NHP2 ribonucleoprotein
mm10_v2_chr19_-_4477447_4477592	2.02836	Pitx2_Otx2	ENSMUST00000059295.3|Syt12|ENSMUSG00000049303.4|synaptotagmin XII
mm10_v2_chr11_-_106998483_106998491	1.99046	Pitx2_Otx2	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr8_-_111992258_111992302	1.97093	Pitx2_Otx2	ENSMUST00000034427.5|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1 	ENSMUST00000139820.1|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1
mm10_v2_chr7_-_118116128_118116167	1.96276	Pitx2_Otx2	ENSMUST00000128482.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A 	ENSMUST00000131840.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A
mm10_v2_chr2_+_129100995_129101066	1.93345	Pitx2_Otx2	ENSMUST00000103205.4|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B 	ENSMUST00000028874.7|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B
mm10_v2_chr12_+_87026286_87026297	1.93073	Pitx2_Otx2	ENSMUST00000146292.1|Tmem63c|ENSMUSG00000034145.8|transmembrane protein 63c
mm10_v2_chr10_+_80292453_80292645	1.92087	Pitx2_Otx2	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr6_+_134929089_134929103	1.92083	Pitx2_Otx2	ENSMUST00000183867.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184991.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000183905.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr3_-_153912966_153912990	1.91122	Pitx2_Otx2	ENSMUST00000089950.4|Rabggtb|ENSMUSG00000038975.8|RAB geranylgeranyl transferase, b subunit
mm10_v2_chr6_+_134929118_134929164	1.84611	Pitx2_Otx2	ENSMUST00000185152.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184504.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr2_+_32587057_32587123	1.81362	Pitx2_Otx2	ENSMUST00000102818.4|St6galnac4|ENSMUSG00000079442.6|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm10_v2_chr10_+_20347788_20347859	1.81102	Pitx2_Otx2	ENSMUST00000169712.1|Mtfr2|ENSMUSG00000019992.7|mitochondrial fission regulator 2
mm10_v2_chr2_-_76215363_76215405	1.79596	Pitx2_Otx2	ENSMUST00000144892.1|Pde11a|ENSMUSG00000075270.5|phosphodiesterase 11A
mm10_v2_chr19_+_37376359_37376422	1.76925	Pitx2_Otx2	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr12_-_28635914_28635953	1.76539	Pitx2_Otx2	ENSMUST00000074267.3|Rps7|ENSMUSG00000061477.3|ribosomal protein S7
mm10_v2_chr5_-_125294107_125294136	1.7292	Pitx2_Otx2	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr11_+_101442298_101442439	1.6931	Pitx2_Otx2	ENSMUST00000077856.6|Rpl27|ENSMUSG00000063316.7|ribosomal protein L27
mm10_v2_chr9_+_15306212_15306219	1.6748	Pitx2_Otx2	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr11_-_73138245_73138310	1.66077	Pitx2_Otx2	ENSMUST00000052140.2|Gsg2|ENSMUSG00000050107.2|germ cell-specific gene 2
mm10_v2_chr8_-_72435043_72435156	1.61462	Pitx2_Otx2	ENSMUST00000109974.1|Calr3|ENSMUSG00000019732.8|calreticulin 3
mm10_v2_chr11_-_102925086_102925130	1.59891	Pitx2_Otx2	ENSMUST00000021311.9|Kif18b|ENSMUSG00000051378.10|kinesin family member 18B
mm10_v2_chr15_-_76639840_76639958	1.58752	Pitx2_Otx2	ENSMUST00000166974.1|Tonsl|ENSMUSG00000059323.7|tonsoku-like, DNA repair protein 	ENSMUST00000168185.1|Tonsl|ENSMUSG00000059323.7|tonsoku-like, DNA repair protein
mm10_v2_chr8_-_70510552_70510584	1.58583	Pitx2_Otx2	ENSMUST00000125184.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1
mm10_v2_chr4_-_139352538_139352586	1.57926	Pitx2_Otx2	ENSMUST00000102503.3|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm10_v2_chr4_-_32923455_32923530	1.5529	Pitx2_Otx2	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr13_-_38658991_38659038	1.52273	Pitx2_Otx2	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr8_-_41215146_41215168	1.51024	Pitx2_Otx2	ENSMUST00000034003.4|Fgl1|ENSMUSG00000031594.9|fibrinogen-like protein 1
mm10_v2_chr5_-_8422582_8422693	1.48922	Pitx2_Otx2	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr10_-_62602261_62602298	1.48355	Pitx2_Otx2	ENSMUST00000045866.7|Ddx21|ENSMUSG00000020075.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
mm10_v2_chr9_+_54950808_54950820	1.44607	Pitx2_Otx2	ENSMUST00000172407.1|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr17_-_46763576_46763644	1.4433	Pitx2_Otx2	ENSMUST00000041012.7|Ptcra|ENSMUSG00000036858.7|pre T cell antigen receptor alpha
mm10_v2_chr5_+_30711849_30711905	1.44171	Pitx2_Otx2	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr4_+_138775735_138775784	1.43693	Pitx2_Otx2	ENSMUST00000030528.2|Pla2g2d|ENSMUSG00000041202.6|phospholipase A2, group IID
mm10_v2_chr18_+_36760214_36760292	1.43611	Pitx2_Otx2	ENSMUST00000049323.7|Wdr55|ENSMUSG00000042660.7|WD repeat domain 55
mm10_v2_chr5_+_30711564_30711586	1.4229	Pitx2_Otx2	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr5_-_8422695_8422727	1.42166	Pitx2_Otx2	ENSMUST00000171808.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr5_+_107900502_107900577	1.41489	Pitx2_Otx2	ENSMUST00000082223.6|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr15_+_81987835_81987848	1.41465	Pitx2_Otx2	ENSMUST00000165777.1|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6
mm10_v2_chr9_-_78489141_78489166	1.40763	Pitx2_Otx2	ENSMUST00000154207.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr2_-_32704123_32704139	1.40571	Pitx2_Otx2	ENSMUST00000127812.1|Fpgs|ENSMUSG00000009566.6|folylpolyglutamyl synthetase
mm10_v2_chr7_-_44257378_44257378	1.39592	Pitx2_Otx2	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr4_-_149137536_149137629	1.38775	Pitx2_Otx2	ENSMUST00000176124.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000177408.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000105695.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000030813.3|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1
mm10_v2_chr10_+_81070035_81070121	1.38478	Pitx2_Otx2	ENSMUST00000005057.6|Thop1|ENSMUSG00000004929.6|thimet oligopeptidase 1
mm10_v2_chr4_+_156109971_156110004	1.38343	Pitx2_Otx2	ENSMUST00000072554.6|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene 	ENSMUST00000169550.1|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene 	ENSMUST00000105576.1|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene
mm10_v2_chr14_-_8309770_8309795	1.37742	Pitx2_Otx2	ENSMUST00000121887.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000036070.8|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000137133.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr19_+_36083696_36083736	1.37315	Pitx2_Otx2	ENSMUST00000025714.7|Rpp30|ENSMUSG00000024800.7|ribonuclease P/MRP 30 subunit
mm10_v2_chr6_-_13224965_13224965	1.34838	Pitx2_Otx2	ENSMUST00000054530.5|Vwde|ENSMUSG00000079679.1|von Willebrand factor D and EGF domains
mm10_v2_chr5_-_24392012_24392143	1.34556	Pitx2_Otx2	ENSMUST00000059401.6|Atg9b|ENSMUSG00000038295.8|autophagy related 9B
mm10_v2_chr5_-_72587544_72587555	1.33611	Pitx2_Otx2	ENSMUST00000031124.4|Gm5868|ENSMUSG00000060204.4|predicted gene 5868
mm10_v2_chr13_-_69611421_69611446	1.33451	Pitx2_Otx2	ENSMUST00000091514.5|Srd5a1|ENSMUSG00000021594.10|steroid 5 alpha-reductase 1
mm10_v2_chr11_+_114668524_114668626	1.32631	Pitx2_Otx2	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr9_+_54950782_54950797	1.31674	Pitx2_Otx2	ENSMUST00000034848.7|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr6_+_40964760_40964781	1.28209	Pitx2_Otx2	ENSMUST00000076638.5|1810009J06Rik|ENSMUSG00000094808.1|RIKEN cDNA 1810009J06 gene
mm10_v2_chr7_-_122101735_122101886	1.28196	Pitx2_Otx2	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr16_+_59471775_59471861	1.27986	Pitx2_Otx2	ENSMUST00000023407.5|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120667.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120674.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen
mm10_v2_chr14_-_63509092_63509092	1.27464	Pitx2_Otx2	ENSMUST00000022522.8|Tdh|ENSMUSG00000021953.8|L-threonine dehydrogenase
mm10_v2_chr10_+_62947011_62947073	1.27336	Pitx2_Otx2	ENSMUST00000131422.1|Dna2|ENSMUSG00000036875.9|DNA replication helicase 2 homolog (yeast)
mm10_v2_chr8_+_70152754_70152781	1.26174	Pitx2_Otx2	ENSMUST00000072500.6|2310045N01Rik|ENSMUSG00000002345.11|RIKEN cDNA 2310045N01 gene 	ENSMUST00000164040.1|2310045N01Rik|ENSMUSG00000002345.11|RIKEN cDNA 2310045N01 gene 	ENSMUST00000110146.2|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110143.1|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110141.2|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110140.1|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B
mm10_v2_chr10_-_80406811_80406830	1.23528	Pitx2_Otx2	ENSMUST00000020372.5|Uqcr11|ENSMUSG00000020163.6|ubiquinol-cytochrome c reductase, complex III subunit XI
mm10_v2_chr6_+_113531675_113531721	1.23101	Pitx2_Otx2	ENSMUST00000036340.5|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2 	ENSMUST00000101051.2|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2
mm10_v2_chr11_-_87108656_87108719	1.21481	Pitx2_Otx2	ENSMUST00000051395.8|Prr11|ENSMUSG00000020493.8|proline rich 11
mm10_v2_chr7_+_45155865_45155943	1.2122	Pitx2_Otx2	ENSMUST00000107811.1|Pih1d1|ENSMUSG00000003423.8|PIH1 domain containing 1
mm10_v2_chr13_+_8202885_8202918	1.21121	Pitx2_Otx2	ENSMUST00000139438.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2 	ENSMUST00000135574.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2
mm10_v2_chr6_-_131293187_131293248	1.1921	Pitx2_Otx2	ENSMUST00000032307.5|Magohb|ENSMUSG00000030188.6|mago-nashi homolog B (Drosophila)
mm10_v2_chr15_-_83122756_83122801	1.19168	Pitx2_Otx2	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chr3_+_134828993_134829015	1.19019	Pitx2_Otx2	ENSMUST00000029822.4|Tacr3|ENSMUSG00000028172.4|tachykinin receptor 3
mm10_v2_chr15_-_102667749_102667749	1.18747	Pitx2_Otx2	ENSMUST00000075630.3|Atp5g2|ENSMUSG00000062683.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
mm10_v2_chr4_-_86612009_86612062	1.18698	Pitx2_Otx2	ENSMUST00000125481.1|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6 	ENSMUST00000070607.7|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6
mm10_v2_chr8_-_105568298_105568298	1.17895	Pitx2_Otx2	ENSMUST00000005849.5|Agrp|ENSMUSG00000005705.5|agouti related protein
mm10_v2_chr13_-_99412816_99412864	1.16425	Pitx2_Otx2	ENSMUST00000180808.1|6430562O15Rik|ENSMUSG00000097828.1|RIKEN cDNA 6430562O15 gene
mm10_v2_chr7_-_38107490_38107534	1.15909	Pitx2_Otx2	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr4_-_139352298_139352313	1.15752	Pitx2_Otx2	ENSMUST00000030513.6|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae) 	ENSMUST00000155257.1|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm10_v2_chr4_+_115000156_115000170	1.15745	Pitx2_Otx2	ENSMUST00000030490.6|Stil|ENSMUSG00000028718.10|Scl/Tal1 interrupting locus
mm10_v2_chr17_+_6430112_6430204	1.14516	Pitx2_Otx2	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr17_-_12851893_12851916	1.14329	Pitx2_Otx2	ENSMUST00000162389.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000162119.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000159223.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene
mm10_v2_chr8_+_70673198_70673267	1.13094	Pitx2_Otx2	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr7_-_118116171_118116198	1.13086	Pitx2_Otx2	ENSMUST00000131374.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A
mm10_v2_chr2_-_30801698_30801742	1.12682	Pitx2_Otx2	ENSMUST00000050003.8|1700001O22Rik|ENSMUSG00000044320.8|RIKEN cDNA 1700001O22 gene
mm10_v2_chr4_-_116627921_116627956	1.12293	Pitx2_Otx2	ENSMUST00000030456.7|Nasp|ENSMUSG00000028693.9|nuclear autoantigenic sperm protein (histone-binding)
mm10_v2_chr17_+_80224441_80224493	1.12125	Pitx2_Otx2	ENSMUST00000069486.6|Gemin6|ENSMUSG00000055760.6|gem (nuclear organelle) associated protein 6
mm10_v2_chr17_-_35673738_35673750	1.11831	Pitx2_Otx2	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr11_+_3963970_3963983	1.10836	Pitx2_Otx2	ENSMUST00000020705.4|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish) 	ENSMUST00000109985.1|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm10_v2_chr7_+_101896817_101896961	1.08538	Pitx2_Otx2	ENSMUST00000143835.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr11_-_116027961_116027978	1.07919	Pitx2_Otx2	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr10_-_92722356_92722420	1.07913	Pitx2_Otx2	ENSMUST00000020163.6|Nedd1|ENSMUSG00000019988.6|neural precursor cell expressed, developmentally down-regulated gene 1
mm10_v2_chr7_-_101903783_101903786	1.0753	Pitx2_Otx2	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr6_-_120357440_120357489	1.06943	Pitx2_Otx2	ENSMUST00000112703.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr7_+_16781341_16781352	1.06743	Pitx2_Otx2	ENSMUST00000108496.2|Slc1a5|ENSMUSG00000001918.11|solute carrier family 1 (neutral amino acid transporter), member 5
mm10_v2_chr3_-_27896360_27896390	1.06047	Pitx2_Otx2	ENSMUST00000058077.3|Tmem212|ENSMUSG00000043164.3|transmembrane protein 212
mm10_v2_chr11_+_69015911_69016135	1.06034	Pitx2_Otx2	ENSMUST00000021278.7|Ctc1|ENSMUSG00000020898.12|CTS telomere maintenance complex component 1 	ENSMUST00000161455.1|Ctc1|ENSMUSG00000020898.12|CTS telomere maintenance complex component 1 	ENSMUST00000116359.2|Ctc1|ENSMUSG00000020898.12|CTS telomere maintenance complex component 1
mm10_v2_chr6_-_124814288_124814296	1.05153	Pitx2_Otx2	ENSMUST00000172132.2|Tpi1|ENSMUSG00000023456.8|triosephosphate isomerase 1
mm10_v2_chr4_+_89137122_89137122	1.05032	Pitx2_Otx2	ENSMUST00000058030.7|Mtap|ENSMUSG00000062937.5|methylthioadenosine phosphorylase
mm10_v2_chr6_-_120357342_120357400	1.04765	Pitx2_Otx2	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr17_-_29264115_29264158	1.04078	Pitx2_Otx2	ENSMUST00000024802.8|Ppil1|ENSMUSG00000024007.8|peptidylprolyl isomerase (cyclophilin)-like 1
mm10_v2_chr8_-_105707933_105707933	1.04035	Pitx2_Otx2	ENSMUST00000013299.9|Enkd1|ENSMUSG00000013155.9|enkurin domain containing 1
mm10_v2_chr13_-_118387224_118387275	1.04006	Pitx2_Otx2	ENSMUST00000022245.8|Mrps30|ENSMUSG00000021731.9|mitochondrial ribosomal protein S30
mm10_v2_chr11_+_97685794_97685845	1.03837	Pitx2_Otx2	ENSMUST00000107584.1|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3 	ENSMUST00000107585.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr9_-_7836980_7837096	1.035	Pitx2_Otx2	ENSMUST00000054878.5|C330006D17Rik|ENSMUSG00000049742.5|RIKEN cDNA C330006D17 gene
mm10_v2_chr16_-_4719078_4719126	1.02533	Pitx2_Otx2	ENSMUST00000120056.1|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1 	ENSMUST00000074970.7|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1
mm10_v2_chr8_+_70131327_70131392	1.02092	Pitx2_Otx2	ENSMUST00000095273.5|Nr2c2ap|ENSMUSG00000071078.5|nuclear receptor 2C2-associated protein
mm10_v2_chr4_+_95579417_95579428	1.0171	Pitx2_Otx2	ENSMUST00000043335.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr17_-_35969724_35969785	1.01492	Pitx2_Otx2	ENSMUST00000043757.8|Abcf1|ENSMUSG00000038762.9|ATP-binding cassette, sub-family F (GCN20), member 1
mm10_v2_chr14_+_63860290_63860361	1.01022	Pitx2_Otx2	ENSMUST00000022528.4|Pinx1|ENSMUSG00000021958.4|PIN2/TERF1 interacting, telomerase inhibitor 1
mm10_v2_chr7_+_66060338_66060338	1.01018	Pitx2_Otx2	ENSMUST00000153609.1|Snrpa1|ENSMUSG00000030512.7|small nuclear ribonucleoprotein polypeptide A'
mm10_v2_chr15_+_76904070_76904092	1.00658	Pitx2_Otx2	ENSMUST00000004072.8|Rpl8|ENSMUSG00000003970.8|ribosomal protein L8
mm10_v2_chr4_-_44066960_44067061	1.00522	Pitx2_Otx2	ENSMUST00000173234.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 	ENSMUST00000173274.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
mm10_v2_chr16_+_55966275_55966334	1.00169	Pitx2_Otx2	ENSMUST00000023269.4|RPL24|ENSMUSG00000098274.1|60S ribosomal protein L24
mm10_v2_chr11_+_76945719_76945821	0.999568	Pitx2_Otx2	ENSMUST00000125145.1|Blmh|ENSMUSG00000020840.4|bleomycin hydrolase
mm10_v2_chr1_+_93685574_93685694	0.989743	Pitx2_Otx2	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr4_+_95579463_95579499	0.981132	Pitx2_Otx2	ENSMUST00000150830.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000134012.2|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chrX_+_134585644_134585698	0.979873	Pitx2_Otx2	ENSMUST00000113211.1|Rpl36a|ENSMUSG00000079435.3|ribosomal protein L36A
mm10_v2_chr2_-_73214323_73214333	0.959961	Pitx2_Otx2	ENSMUST00000100015.4|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr11_-_120796369_120796405	0.955388	Pitx2_Otx2	ENSMUST00000143139.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000129955.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000026151.4|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000167023.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106133.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106135.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae)
mm10_v2_chr6_-_124888192_124888221	0.954286	Pitx2_Otx2	ENSMUST00000024044.6|Cd4|ENSMUSG00000023274.8|CD4 antigen
mm10_v2_chr11_+_97685903_97685966	0.948858	Pitx2_Otx2	ENSMUST00000107583.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr7_-_45128725_45128748	0.947447	Pitx2_Otx2	ENSMUST00000150350.1|Rpl13a|ENSMUSG00000074129.6|ribosomal protein L13A
mm10_v2_chr8_-_70510322_70510422	0.943488	Pitx2_Otx2	ENSMUST00000140679.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1 	ENSMUST00000129909.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1 	ENSMUST00000081940.4|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1
mm10_v2_chr16_-_4719148_4719164	0.943126	Pitx2_Otx2	ENSMUST00000115851.3|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1
mm10_v2_chr12_+_51348265_51348368	0.934092	Pitx2_Otx2	ENSMUST00000119211.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr7_+_45718058_45718111	0.932351	Pitx2_Otx2	ENSMUST00000072503.6|Rpl18|ENSMUSG00000059070.8|ribosomal protein L18
mm10_v2_chr11_-_93965957_93966043	0.931802	Pitx2_Otx2	ENSMUST00000021220.3|Nme1|ENSMUSG00000037601.5|NME/NM23 nucleoside diphosphate kinase 1
mm10_v2_chr11_+_4902212_4902247	0.929088	Pitx2_Otx2	ENSMUST00000142543.1|Thoc5|ENSMUSG00000034274.5|THO complex 5
mm10_v2_chr10_-_127522428_127522454	0.922059	Pitx2_Otx2	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chr15_+_102407144_102407269	0.913623	Pitx2_Otx2	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr1_-_93342734_93342803	0.913497	Pitx2_Otx2	ENSMUST00000027493.3|Pask|ENSMUSG00000026274.5|PAS domain containing serine/threonine kinase
mm10_v2_chr9_-_21149894_21149978	0.912879	Pitx2_Otx2	ENSMUST00000019615.9|Cdc37|ENSMUSG00000019471.9|cell division cycle 37
mm10_v2_chr11_+_116848901_116848901	0.907155	Pitx2_Otx2	ENSMUST00000143184.1|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr7_+_119900099_119900108	0.907111	Pitx2_Otx2	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr8_+_33653238_33653238	0.904128	Pitx2_Otx2	ENSMUST00000033992.8|Gsr|ENSMUSG00000031584.10|glutathione reductase
mm10_v2_chr5_-_139460501_139460549	0.900434	Pitx2_Otx2	ENSMUST00000066052.7|3110082I17Rik|ENSMUSG00000053553.7|RIKEN cDNA 3110082I17 gene
mm10_v2_chr6_+_35177610_35177629	0.90026	Pitx2_Otx2	ENSMUST00000170234.1|Nup205|ENSMUSG00000038759.9|nucleoporin 205
mm10_v2_chr2_-_164638789_164638810	0.896822	Pitx2_Otx2	ENSMUST00000109336.1|Wfdc16|ENSMUSG00000070530.5|WAP four-disulfide core domain 16
mm10_v2_chr6_+_35177386_35177430	0.896324	Pitx2_Otx2	ENSMUST00000043815.9|Nup205|ENSMUSG00000038759.9|nucleoporin 205
mm10_v2_chr17_+_6601671_6601671	0.894635	Pitx2_Otx2	ENSMUST00000092966.4|Dynlt1c|ENSMUSG00000000579.8|dynein light chain Tctex-type 1C
mm10_v2_chr11_+_97029925_97029997	0.894334	Pitx2_Otx2	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr12_+_51348370_51348406	0.889895	Pitx2_Otx2	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr17_+_28313513_28313644	0.884262	Pitx2_Otx2	ENSMUST00000114803.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114801.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114804.3|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000088007.4|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E
mm10_v2_chr4_-_138913915_138913983	0.881874	Pitx2_Otx2	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chrX_-_162964557_162964599	0.881124	Pitx2_Otx2	ENSMUST00000038769.2|S100g|ENSMUSG00000040808.4|S100 calcium binding protein G
mm10_v2_chr13_-_25270076_25270094	0.879616	Pitx2_Otx2	ENSMUST00000057866.6|Nrsn1|ENSMUSG00000048978.7|neurensin 1
mm10_v2_chr5_+_134582690_134582727	0.879439	Pitx2_Otx2	ENSMUST00000023867.6|Rfc2|ENSMUSG00000023104.6|replication factor C (activator 1) 2
mm10_v2_chr1_-_4785671_4785744	0.878638	Pitx2_Otx2	ENSMUST00000130201.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15 	ENSMUST00000156816.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15
mm10_v2_chr12_-_79192248_79192293	0.874534	Pitx2_Otx2	ENSMUST00000161204.1|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr7_-_4445595_4445631	0.872825	Pitx2_Otx2	ENSMUST00000119485.1|Rdh13|ENSMUSG00000008435.9|retinol dehydrogenase 13 (all-trans and 9-cis)
mm10_v2_chr12_+_83950608_83950705	0.871713	Pitx2_Otx2	ENSMUST00000053744.7|2410016O06Rik|ENSMUSG00000046791.7|RIKEN cDNA 2410016O06 gene
mm10_v2_chr11_+_32205411_32205481	0.87005	Pitx2_Otx2	ENSMUST00000039601.3|Snrnp25|ENSMUSG00000040767.4|small nuclear ribonucleoprotein 25 (U11/U12) 	ENSMUST00000149043.1|Snrnp25|ENSMUSG00000040767.4|small nuclear ribonucleoprotein 25 (U11/U12)
mm10_v2_chr15_-_36598019_36598124	0.868419	Pitx2_Otx2	ENSMUST00000155116.1|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chr6_+_136808248_136808261	0.86832	Pitx2_Otx2	ENSMUST00000074556.4|H2afj|ENSMUSG00000060032.4|H2A histone family, member J
mm10_v2_chr10_+_84622365_84622437	0.863313	Pitx2_Otx2	ENSMUST00000077175.5|Polr3b|ENSMUSG00000034453.7|polymerase (RNA) III (DNA directed) polypeptide B
mm10_v2_chr15_+_79670856_79670888	0.86307	Pitx2_Otx2	ENSMUST00000023062.3|Tomm22|ENSMUSG00000022427.3|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm10_v2_chr1_+_118321834_118321882	0.858856	Pitx2_Otx2	ENSMUST00000027626.6|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein 	ENSMUST00000112688.3|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein
mm10_v2_chr8_-_84966008_84966091	0.85388	Pitx2_Otx2	ENSMUST00000109738.3|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit 	ENSMUST00000065049.8|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit 	ENSMUST00000128972.1|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit
mm10_v2_chr2_+_32095518_32095595	0.851888	Pitx2_Otx2	ENSMUST00000057423.5|Ppapdc3|ENSMUSG00000051373.5|phosphatidic acid phosphatase type 2 domain containing 3
mm10_v2_chr4_-_117156144_117156243	0.849336	Pitx2_Otx2	ENSMUST00000102696.4|Rps8|ENSMUSG00000047675.9|ribosomal protein S8
mm10_v2_chr6_+_55037988_55038091	0.847688	Pitx2_Otx2	ENSMUST00000003572.8|Gars|ENSMUSG00000029777.9|glycyl-tRNA synthetase
mm10_v2_chr4_+_108579445_108579470	0.845229	Pitx2_Otx2	ENSMUST00000102744.3|Orc1|ENSMUSG00000028587.12|origin recognition complex, subunit 1
mm10_v2_chr6_-_120357422_120357435	0.844904	Pitx2_Otx2	ENSMUST00000032283.5|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr1_+_9547948_9548101	0.83955	Pitx2_Otx2	ENSMUST00000144177.1|Adhfe1|ENSMUSG00000025911.8|alcohol dehydrogenase, iron containing, 1
mm10_v2_chr5_+_115559505_115559578	0.838973	Pitx2_Otx2	ENSMUST00000156359.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0 	ENSMUST00000152976.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr7_-_30612731_30612744	0.837296	Pitx2_Otx2	ENSMUST00000006476.4|Upk1a|ENSMUSG00000006313.4|uroplakin 1A
mm10_v2_chr12_+_51348019_51348061	0.837092	Pitx2_Otx2	ENSMUST00000054308.6|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr9_-_15357692_15357788	0.836517	Pitx2_Otx2	ENSMUST00000098979.3|5830418K08Rik|ENSMUSG00000046111.10|RIKEN cDNA 5830418K08 gene 	ENSMUST00000161132.1|5830418K08Rik|ENSMUSG00000046111.10|RIKEN cDNA 5830418K08 gene
mm10_v2_chr4_+_155582476_155582495	0.836365	Pitx2_Otx2	ENSMUST00000105612.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr19_-_38819156_38819242	0.835871	Pitx2_Otx2	ENSMUST00000025963.7|Noc3l|ENSMUSG00000024999.7|nucleolar complex associated 3 homolog (S. cerevisiae)
mm10_v2_chr4_+_117019400_117019437	0.835136	Pitx2_Otx2	ENSMUST00000106448.2|Eif2b3|ENSMUSG00000028683.8|eukaryotic translation initiation factor 2B, subunit 3 	ENSMUST00000106447.2|Eif2b3|ENSMUSG00000028683.8|eukaryotic translation initiation factor 2B, subunit 3
mm10_v2_chr2_-_26640230_26640249	0.832315	Pitx2_Otx2	ENSMUST00000181621.1|Snhg7|ENSMUSG00000097052.1|small nucleolar RNA host gene (non-protein coding) 7 	ENSMUST00000180659.1|Snhg7|ENSMUSG00000097052.1|small nucleolar RNA host gene (non-protein coding) 7
mm10_v2_chr11_+_54866374_54866392	0.829875	Pitx2_Otx2	ENSMUST00000020504.5|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr5_+_115559467_115559499	0.829312	Pitx2_Otx2	ENSMUST00000086519.5|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr9_-_107985863_107985893	0.82868	Pitx2_Otx2	ENSMUST00000048568.4|Fam212a|ENSMUSG00000042106.4|family with sequence similarity 212, member A
mm10_v2_chr10_-_43540945_43541024	0.82667	Pitx2_Otx2	ENSMUST00000147196.1|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene 	ENSMUST00000019932.3|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene
mm10_v2_chr4_-_156255327_156255344	0.825934	Pitx2_Otx2	ENSMUST00000179919.1|Samd11|ENSMUSG00000096351.1|sterile alpha motif domain containing 11
mm10_v2_chr2_+_174415804_174415871	0.825795	Pitx2_Otx2	ENSMUST00000109075.1|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l 	ENSMUST00000016397.6|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l
mm10_v2_chr9_+_57521232_57521314	0.825323	Pitx2_Otx2	ENSMUST00000000090.6|Cox5a|ENSMUSG00000000088.6|cytochrome c oxidase subunit Va
mm10_v2_chr1_-_33669745_33669792	0.814441	Pitx2_Otx2	ENSMUST00000027312.9|Prim2|ENSMUSG00000026134.10|DNA primase, p58 subunit
mm10_v2_chr11_-_68973840_68973864	0.807814	Pitx2_Otx2	ENSMUST00000038644.4|Rangrf|ENSMUSG00000032892.8|RAN guanine nucleotide release factor
mm10_v2_chrM_+_7759_7927	0.806884	Pitx2_Otx2	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr2_-_34913976_34914043	0.802009	Pitx2_Otx2	ENSMUST00000028232.3|Phf19|ENSMUSG00000026873.3|PHD finger protein 19
mm10_v2_chr8_+_124023394_124023394	0.800368	Pitx2_Otx2	ENSMUST00000034457.8|Urb2|ENSMUSG00000031976.8|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm10_v2_chr14_+_52110939_52110953	0.799465	Pitx2_Otx2	ENSMUST00000111600.4|Rpgrip1|ENSMUSG00000057132.9|retinitis pigmentosa GTPase regulator interacting protein 1
mm10_v2_chr6_-_29165003_29165008	0.797164	Pitx2_Otx2	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr10_+_18407658_18407715	0.795557	Pitx2_Otx2	ENSMUST00000037341.7|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr14_-_59395381_59395381	0.794835	Pitx2_Otx2	ENSMUST00000166912.2|Phf11c|ENSMUSG00000091144.2|PHD finger protein 11C
mm10_v2_chr9_-_20898592_20898631	0.793764	Pitx2_Otx2	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr3_+_107230608_107230617	0.793628	Pitx2_Otx2	ENSMUST00000179399.1|A630076J17Rik|ENSMUSG00000094613.1|RIKEN cDNA A630076J17 gene
mm10_v2_chr7_+_19291070_19291124	0.793151	Pitx2_Otx2	ENSMUST00000108468.3|Rtn2|ENSMUSG00000030401.9|reticulon 2 (Z-band associated protein)
mm10_v2_chr9_+_110243783_110243783	0.790614	Pitx2_Otx2	ENSMUST00000035058.5|Cspg5|ENSMUSG00000032482.5|chondroitin sulfate proteoglycan 5
mm10_v2_chr7_+_17087934_17087961	0.788678	Pitx2_Otx2	ENSMUST00000152671.1|Psg16|ENSMUSG00000066760.6|pregnancy specific glycoprotein 16
mm10_v2_chr13_-_23430826_23431022	0.786153	Pitx2_Otx2	ENSMUST00000153753.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene 	ENSMUST00000141543.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene
mm10_v2_chr18_+_40256960_40257018	0.777782	Pitx2_Otx2	ENSMUST00000096572.1|2900055J20Rik|ENSMUSG00000071860.1|RIKEN cDNA 2900055J20 gene
mm10_v2_chr7_-_45204892_45204892	0.775073	Pitx2_Otx2	ENSMUST00000121017.2|Ccdc155|ENSMUSG00000038292.12|coiled-coil domain containing 155
mm10_v2_chr6_+_79818031_79818031	0.772184	Pitx2_Otx2	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr16_-_56037728_56037819	0.767482	Pitx2_Otx2	ENSMUST00000059052.8|Trmt10c|ENSMUSG00000044763.8|tRNA methyltransferase 10C
mm10_v2_chr7_-_4445637_4445662	0.763277	Pitx2_Otx2	ENSMUST00000008579.7|Rdh13|ENSMUSG00000008435.9|retinol dehydrogenase 13 (all-trans and 9-cis)
mm10_v2_chr19_-_37330613_37330613	0.762706	Pitx2_Otx2	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr11_+_53720790_53720795	0.759657	Pitx2_Otx2	ENSMUST00000048605.2|Il5|ENSMUSG00000036117.2|interleukin 5
mm10_v2_chr5_-_136198908_136198970	0.751954	Pitx2_Otx2	ENSMUST00000149151.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible) 	ENSMUST00000151786.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible)
mm10_v2_chr8_-_70897407_70897443	0.749869	Pitx2_Otx2	ENSMUST00000054220.8|Rpl18a|ENSMUSG00000045128.8|ribosomal protein L18A
mm10_v2_chr15_+_76701455_76701542	0.747678	Pitx2_Otx2	ENSMUST00000019224.7|Mfsd3|ENSMUSG00000019080.7|major facilitator superfamily domain containing 3
mm10_v2_chr5_+_110544326_110544370	0.747547	Pitx2_Otx2	ENSMUST00000040001.7|Galnt9|ENSMUSG00000033316.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
mm10_v2_chr12_+_70974621_70974686	0.747199	Pitx2_Otx2	ENSMUST00000160027.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3 	ENSMUST00000160864.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3
mm10_v2_chrX_-_157492280_157492340	0.747096	Pitx2_Otx2	ENSMUST00000112529.1|Sms|ENSMUSG00000071708.5|spermine synthase
mm10_v2_chrM_+_8600_8616	0.747054	Pitx2_Otx2	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr8_+_84856982_84857036	0.743277	Pitx2_Otx2	ENSMUST00000003906.6|Farsa|ENSMUSG00000003808.12|phenylalanyl-tRNA synthetase, alpha subunit 	ENSMUST00000109754.1|Farsa|ENSMUSG00000003808.12|phenylalanyl-tRNA synthetase, alpha subunit
mm10_v2_chr1_+_171225054_171225100	0.739349	Pitx2_Otx2	ENSMUST00000111321.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000005824.5|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111320.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111319.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II
mm10_v2_chr18_+_46597698_46597765	0.738705	Pitx2_Otx2	ENSMUST00000078079.3|Eif1a|ENSMUSG00000057561.3|eukaryotic translation initiation factor 1A 	ENSMUST00000168382.1|Eif1a|ENSMUSG00000057561.3|eukaryotic translation initiation factor 1A
mm10_v2_chr1_+_181150926_181150984	0.737122	Pitx2_Otx2	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chrX_-_37104523_37104528	0.734458	Pitx2_Otx2	ENSMUST00000130324.1|Upf3b|ENSMUSG00000036572.10|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm10_v2_chr16_+_17619341_17619389	0.732428	Pitx2_Otx2	ENSMUST00000006053.6|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000171435.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000163476.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000168101.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000165363.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000169662.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000090159.4|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000172182.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4 	ENSMUST00000163592.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4
mm10_v2_chr2_-_5895319_5895432	0.731821	Pitx2_Otx2	ENSMUST00000026926.4|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae) 	ENSMUST00000102981.3|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae)
mm10_v2_chr2_-_130629994_130630038	0.728484	Pitx2_Otx2	ENSMUST00000110262.1|Fastkd5|ENSMUSG00000079043.2|FAST kinase domains 5 	ENSMUST00000028761.4|Ubox5|ENSMUSG00000027300.9|U box domain containing 5
mm10_v2_chr19_+_3282901_3283071	0.728014	Pitx2_Otx2	ENSMUST00000025745.3|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21 	ENSMUST00000025743.6|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21
mm10_v2_chr7_+_45154644_45154734	0.727344	Pitx2_Otx2	ENSMUST00000153973.1|Pih1d1|ENSMUSG00000003423.8|PIH1 domain containing 1
mm10_v2_chr16_-_89818338_89818356	0.727342	Pitx2_Otx2	ENSMUST00000164263.2|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr18_+_80206775_80206881	0.725571	Pitx2_Otx2	ENSMUST00000145963.1|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000125127.1|Gm16286|ENSMUSG00000024571.8|predicted gene 16286 	ENSMUST00000025464.7|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000025463.7|Gm16286|ENSMUSG00000024571.8|predicted gene 16286
mm10_v2_chr12_-_65073927_65073954	0.725068	Pitx2_Otx2	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr17_-_28622479_28622521	0.724351	Pitx2_Otx2	ENSMUST00000130643.1|Srpk1|ENSMUSG00000004865.9|serine/arginine-rich protein specific kinase 1
mm10_v2_chr7_+_45163915_45163926	0.721636	Pitx2_Otx2	ENSMUST00000085374.5|Slc17a7|ENSMUSG00000070570.4|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm10_v2_chr12_-_69159109_69159186	0.721595	Pitx2_Otx2	ENSMUST00000037023.8|Rps29|ENSMUSG00000034892.8|ribosomal protein S29
mm10_v2_chr16_+_38362205_38362230	0.716365	Pitx2_Otx2	ENSMUST00000023494.6|Popdc2|ENSMUSG00000022803.6|popeye domain containing 2
mm10_v2_chr11_-_4095344_4095445	0.716092	Pitx2_Otx2	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr2_+_61711694_61711786	0.714148	Pitx2_Otx2	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chr19_-_47536997_47537119	0.7138	Pitx2_Otx2	ENSMUST00000182808.1|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1 	ENSMUST00000049369.9|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1
mm10_v2_chr3_+_86070915_86070915	0.711535	Pitx2_Otx2	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr6_+_122707489_122707608	0.709717	Pitx2_Otx2	ENSMUST00000112581.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000112580.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000012540.4|Nanog|ENSMUSG00000012396.6|Nanog homeobox
mm10_v2_chr11_+_54866413_54866481	0.709139	Pitx2_Otx2	ENSMUST00000117710.1|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr4_+_115000174_115000189	0.706287	Pitx2_Otx2	ENSMUST00000129957.1|Stil|ENSMUSG00000028718.10|Scl/Tal1 interrupting locus
mm10_v2_chr6_-_90224438_90224438	0.703165	Pitx2_Otx2	ENSMUST00000076086.2|Vmn1r53|ENSMUSG00000057697.2|vomeronasal 1 receptor 53
mm10_v2_chr7_-_45466894_45466901	0.701001	Pitx2_Otx2	ENSMUST00000033093.8|Bax|ENSMUSG00000003873.10|BCL2-associated X protein
mm10_v2_chrX_+_71932433_71932444	0.699214	Pitx2_Otx2	ENSMUST00000101495.2|Gm1141|ENSMUSG00000073130.2|predicted gene 1141
mm10_v2_chr4_+_119637704_119637721	0.694252	Pitx2_Otx2	ENSMUST00000024015.2|Guca2a|ENSMUSG00000023247.2|guanylate cyclase activator 2a (guanylin)
mm10_v2_chr2_+_30807826_30807999	0.691433	Pitx2_Otx2	ENSMUST00000041830.3|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1 	ENSMUST00000152374.1|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm10_v2_chr3_+_90072641_90072657	0.690221	Pitx2_Otx2	ENSMUST00000121503.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119570.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000062193.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chrX_+_159532655_159532668	0.688107	Pitx2_Otx2	ENSMUST00000112464.1|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chr4_+_80910646_80910685	0.687393	Pitx2_Otx2	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chr16_-_22265950_22266005	0.68684	Pitx2_Otx2	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr3_-_146521396_146521430	0.685641	Pitx2_Otx2	ENSMUST00000029838.6|Rpf1|ENSMUSG00000028187.6|ribosome production factor 1 homolog (S. cerevisiae)
mm10_v2_chr19_+_8735808_8735864	0.68561	Pitx2_Otx2	ENSMUST00000049424.9|Wdr74|ENSMUSG00000042729.9|WD repeat domain 74
mm10_v2_chr7_-_46958475_46958527	0.685565	Pitx2_Otx2	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr10_-_71238274_71238288	0.683763	Pitx2_Otx2	ENSMUST00000092430.4|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial 	ENSMUST00000105432.3|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial
mm10_v2_chr16_-_15594472_15594503	0.683562	Pitx2_Otx2	ENSMUST00000118236.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000096234.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr17_+_24669730_24669752	0.683475	Pitx2_Otx2	ENSMUST00000047179.5|Zfp598|ENSMUSG00000041130.9|zinc finger protein 598
mm10_v2_chr17_-_6655939_6655939	0.682273	Pitx2_Otx2	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr13_-_54468805_54468862	0.680957	Pitx2_Otx2	ENSMUST00000026990.5|Thoc3|ENSMUSG00000025872.5|THO complex 3
mm10_v2_chr14_+_20703027_20703077	0.676417	Pitx2_Otx2	ENSMUST00000071215.3|Chchd1|ENSMUSG00000063787.3|coiled-coil-helix-coiled-coil-helix domain containing 1
mm10_v2_chr17_-_23586214_23586269	0.67414	Pitx2_Otx2	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr8_+_46010596_46010635	0.673549	Pitx2_Otx2	ENSMUST00000110381.2|Lrp2bp|ENSMUSG00000031637.7|Lrp2 binding protein
mm10_v2_chr2_-_26380600_26380654	0.67013	Pitx2_Otx2	ENSMUST00000114115.2|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4 	ENSMUST00000035427.4|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4
mm10_v2_chr2_+_92382911_92382924	0.670071	Pitx2_Otx2	ENSMUST00000054316.2|1700029I15Rik|ENSMUSG00000044916.4|RIKEN cDNA 1700029I15 gene 	ENSMUST00000111280.2|1700029I15Rik|ENSMUSG00000044916.4|RIKEN cDNA 1700029I15 gene
mm10_v2_chr3_-_103809278_103809444	0.665377	Pitx2_Otx2	ENSMUST00000063502.6|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106832.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106834.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000029435.8|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm10_v2_chr8_+_60890410_60890483	0.664178	Pitx2_Otx2	ENSMUST00000037190.8|2700029M09Rik|ENSMUSG00000038005.8|RIKEN cDNA 2700029M09 gene
mm10_v2_chr8_-_46124146_46124146	0.66346	Pitx2_Otx2	ENSMUST00000170416.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr10_+_128747850_128747895	0.661951	Pitx2_Otx2	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr5_-_121618865_121618938	0.658609	Pitx2_Otx2	ENSMUST00000041252.6|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12 	ENSMUST00000111776.1|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12
mm10_v2_chrX_+_53724826_53724844	0.658226	Pitx2_Otx2	ENSMUST00000069209.1|4930502E18Rik|ENSMUSG00000055555.1|RIKEN cDNA 4930502E18 gene
mm10_v2_chr16_-_15594507_15594531	0.649186	Pitx2_Otx2	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr8_-_109608623_109608673	0.648309	Pitx2_Otx2	ENSMUST00000123605.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000143900.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000069058.8|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000128350.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase
mm10_v2_chr3_+_116878227_116878227	0.646773	Pitx2_Otx2	ENSMUST00000040260.6|Frrs1|ENSMUSG00000033386.6|ferric-chelate reductase 1
mm10_v2_chrX_+_36112110_36112172	0.641974	Pitx2_Otx2	ENSMUST00000033418.7|Il13ra1|ENSMUSG00000017057.9|interleukin 13 receptor, alpha 1
mm10_v2_chr7_-_118584669_118584741	0.641753	Pitx2_Otx2	ENSMUST00000044195.4|Tmc7|ENSMUSG00000042246.4|transmembrane channel-like gene family 7
mm10_v2_chr5_+_140331860_140331954	0.640042	Pitx2_Otx2	ENSMUST00000071881.3|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000050205.5|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000110827.1|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1
mm10_v2_chr3_+_95111013_95111087	0.639595	Pitx2_Otx2	ENSMUST00000009102.8|Vps72|ENSMUSG00000008958.8|vacuolar protein sorting 72 (yeast)
mm10_v2_chr12_-_111966954_111967017	0.639029	Pitx2_Otx2	ENSMUST00000021719.5|2010107E04Rik|ENSMUSG00000021290.5|RIKEN cDNA 2010107E04 gene
mm10_v2_chr14_+_73173825_73173884	0.637299	Pitx2_Otx2	ENSMUST00000166875.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr7_+_16310412_16310455	0.636248	Pitx2_Otx2	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr11_-_6626030_6626072	0.635197	Pitx2_Otx2	ENSMUST00000000394.7|Tbrg4|ENSMUSG00000000384.9|transforming growth factor beta regulated gene 4 	ENSMUST00000136682.1|Tbrg4|ENSMUSG00000000384.9|transforming growth factor beta regulated gene 4
mm10_v2_chr7_-_15946070_15946108	0.634541	Pitx2_Otx2	ENSMUST00000044158.8|Gltscr2|ENSMUSG00000041560.8|glioma tumor suppressor candidate region gene 2
mm10_v2_chr2_+_28506095_28506095	0.633351	Pitx2_Otx2	ENSMUST00000074761.4|Gm10134|ENSMUSG00000063611.4|predicted gene 10134
mm10_v2_chr15_-_82047579_82047610	0.632396	Pitx2_Otx2	ENSMUST00000166578.1|Nhp2l1|ENSMUSG00000063480.7|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 	ENSMUST00000080622.7|Nhp2l1|ENSMUSG00000063480.7|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
mm10_v2_chr9_+_21029373_21029442	0.630679	Pitx2_Otx2	ENSMUST00000001040.5|Icam4|ENSMUSG00000001014.5|intercellular adhesion molecule 4, Landsteiner-Wiener blood group
mm10_v2_chr17_+_71616215_71616259	0.629135	Pitx2_Otx2	ENSMUST00000047086.9|Wdr43|ENSMUSG00000041057.9|WD repeat domain 43
mm10_v2_chr11_+_53324674_53324704	0.628832	Pitx2_Otx2	ENSMUST00000018383.3|Zcchc10|ENSMUSG00000018239.3|zinc finger, CCHC domain containing 10
mm10_v2_chr5_+_138820080_138820080	0.6279	Pitx2_Otx2	ENSMUST00000179205.1|Gm5294|ENSMUSG00000094504.1|predicted gene 5294
mm10_v2_chr9_-_98601642_98601679	0.627097	Pitx2_Otx2	ENSMUST00000035034.8|Mrps22|ENSMUSG00000032459.8|mitochondrial ribosomal protein S22
mm10_v2_chr7_+_140763739_140763828	0.626715	Pitx2_Otx2	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chr4_-_149099802_149099876	0.624115	Pitx2_Otx2	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr8_+_123062942_123062988	0.623387	Pitx2_Otx2	ENSMUST00000142541.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human) 	ENSMUST00000125975.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human)
mm10_v2_chr19_-_8786408_8786422	0.622923	Pitx2_Otx2	ENSMUST00000176496.1|Taf6l|ENSMUSG00000003680.9|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm10_v2_chr6_-_71823805_71823814	0.621224	Pitx2_Otx2	ENSMUST00000065103.2|Mrpl35|ENSMUSG00000052962.2|mitochondrial ribosomal protein L35
mm10_v2_chr9_+_108936648_108936715	0.61736	Pitx2_Otx2	ENSMUST00000026743.8|Uqcrc1|ENSMUSG00000025651.9|ubiquinol-cytochrome c reductase core protein 1
mm10_v2_chrX_-_136958000_136958028	0.615169	Pitx2_Otx2	ENSMUST00000069803.4|Tmsb15b2|ENSMUSG00000089996.4|thymosin beta 15b2
mm10_v2_chr7_-_34230281_34230308	0.611225	Pitx2_Otx2	ENSMUST00000038027.4|Gpi1|ENSMUSG00000036427.4|glucose phosphate isomerase 1
mm10_v2_chr15_-_76669811_76669948	0.611071	Pitx2_Otx2	ENSMUST00000037824.4|Foxh1|ENSMUSG00000033837.4|forkhead box H1
mm10_v2_chr5_-_110780569_110780659	0.609351	Pitx2_Otx2	ENSMUST00000149208.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000031483.8|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000086643.5|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000170468.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000031481.6|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1
mm10_v2_chr17_-_33824346_33824562	0.608815	Pitx2_Otx2	ENSMUST00000173879.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000166693.2|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000173019.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000087342.6|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000173844.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28
mm10_v2_chr2_+_30281043_30281043	0.60767	Pitx2_Otx2	ENSMUST00000143119.2|RP23-395P6.9|ENSMUSG00000098794.1|RP23-395P6.9
mm10_v2_chr19_+_6184363_6184467	0.606118	Pitx2_Otx2	ENSMUST00000025699.2|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene 	ENSMUST00000113528.1|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene
mm10_v2_chr12_-_54862783_54862921	0.604565	Pitx2_Otx2	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr17_-_74323896_74323954	0.603315	Pitx2_Otx2	ENSMUST00000164832.1|Dpy30|ENSMUSG00000024067.7|dpy-30 homolog (C. elegans)
mm10_v2_chr17_-_35895920_35896001	0.600006	Pitx2_Otx2	ENSMUST00000059740.8|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene
mm10_v2_chr1_+_9545397_9545479	0.595694	Pitx2_Otx2	ENSMUST00000072079.7|Rrs1|ENSMUSG00000061024.7|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm10_v2_chr8_-_126971062_126971079	0.589672	Pitx2_Otx2	ENSMUST00000045994.6|Rbm34|ENSMUSG00000033931.8|RNA binding motif protein 34
mm10_v2_chr11_-_35834492_35834509	0.589393	Pitx2_Otx2	ENSMUST00000018992.3|Rars|ENSMUSG00000018848.4|arginyl-tRNA synthetase
mm10_v2_chr2_-_112259281_112259312	0.587304	Pitx2_Otx2	ENSMUST00000043970.1|Nutm1|ENSMUSG00000041358.1|NUT midline carcinoma, family member 1
mm10_v2_chr13_+_41001002_41001052	0.586595	Pitx2_Otx2	ENSMUST00000046951.9|Pak1ip1|ENSMUSG00000038683.9|PAK1 interacting protein 1
mm10_v2_chr18_+_32837225_32837240	0.586256	Pitx2_Otx2	ENSMUST00000166214.1|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36 	ENSMUST00000053663.9|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36
mm10_v2_chr2_+_181319714_181319785	0.584514	Pitx2_Otx2	ENSMUST00000098971.4|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000054622.8|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000108814.1|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000048608.9|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000108815.1|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1
mm10_v2_chr3_-_63899437_63899477	0.57922	Pitx2_Otx2	ENSMUST00000159188.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000177143.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr11_+_82057823_82057856	0.577812	Pitx2_Otx2	ENSMUST00000000342.2|Ccl11|ENSMUSG00000020676.2|chemokine (C-C motif) ligand 11
mm10_v2_chr4_+_126677630_126677646	0.577723	Pitx2_Otx2	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr8_-_111300222_111300241	0.576273	Pitx2_Otx2	ENSMUST00000038739.4|Rfwd3|ENSMUSG00000033596.4|ring finger and WD repeat domain 3
mm10_v2_chr4_-_150909812_150909926	0.576231	Pitx2_Otx2	ENSMUST00000134751.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000030805.7|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr11_-_55461179_55461239	0.575536	Pitx2_Otx2	ENSMUST00000108857.1|Atox1|ENSMUSG00000018585.9|ATX1 (antioxidant protein 1) homolog 1 (yeast)
mm10_v2_chr4_+_133240778_133240827	0.575292	Pitx2_Otx2	ENSMUST00000030677.6|Map3k6|ENSMUSG00000028862.6|mitogen-activated protein kinase kinase kinase 6
mm10_v2_chr6_+_121245903_121245908	0.574174	Pitx2_Otx2	ENSMUST00000032198.9|Usp18|ENSMUSG00000030107.9|ubiquitin specific peptidase 18
mm10_v2_chr7_-_45154519_45154584	0.571018	Pitx2_Otx2	ENSMUST00000007977.7|Aldh16a1|ENSMUSG00000007833.7|aldehyde dehydrogenase 16 family, member A1 	ENSMUST00000107815.1|Aldh16a1|ENSMUSG00000007833.7|aldehyde dehydrogenase 16 family, member A1
mm10_v2_chr8_+_125734203_125734307	0.568564	Pitx2_Otx2	ENSMUST00000034313.6|Ntpcr|ENSMUSG00000031851.8|nucleoside-triphosphatase, cancer-related 	ENSMUST00000065135.5|Ntpcr|ENSMUSG00000031851.8|nucleoside-triphosphatase, cancer-related
mm10_v2_chr5_+_121204477_121204499	0.56684	Pitx2_Otx2	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr11_+_51967649_51967709	0.564865	Pitx2_Otx2	ENSMUST00000102763.4|Cdkn2aipnl|ENSMUSG00000020392.8|CDKN2A interacting protein N-terminal like
mm10_v2_chr1_-_155232710_155232729	0.564725	Pitx2_Otx2	ENSMUST00000035914.3|BC034090|ENSMUSG00000033722.3|cDNA sequence BC034090
mm10_v2_chr14_+_74735641_74735663	0.56459	Pitx2_Otx2	ENSMUST00000177283.1|Esd|ENSMUSG00000021996.10|esterase D/formylglutathione hydrolase
mm10_v2_chr5_+_74195281_74195294	0.564089	Pitx2_Otx2	ENSMUST00000051937.7|Rasl11b|ENSMUSG00000049907.7|RAS-like, family 11, member B
mm10_v2_chr7_-_46667375_46667378	0.563996	Pitx2_Otx2	ENSMUST00000107669.2|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr1_-_75219245_75219262	0.562298	Pitx2_Otx2	ENSMUST00000079464.6|Tuba4a|ENSMUSG00000026202.7|tubulin, alpha 4A
mm10_v2_chr14_+_54360826_54360851	0.556536	Pitx2_Otx2	ENSMUST00000000985.5|Oxa1l|ENSMUSG00000000959.5|oxidase assembly 1-like
mm10_v2_chr3_-_94436574_94436616	0.556398	Pitx2_Otx2	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chr7_-_128418154_128418192	0.554266	Pitx2_Otx2	ENSMUST00000033133.5|Rgs10|ENSMUSG00000030844.5|regulator of G-protein signalling 10
mm10_v2_chr11_-_86257553_86257575	0.55345	Pitx2_Otx2	ENSMUST00000132024.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000139285.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr5_-_143895025_143895075	0.552928	Pitx2_Otx2	ENSMUST00000079624.5|Ankrd61|ENSMUSG00000029607.8|ankyrin repeat domain 61 	ENSMUST00000110717.2|Ankrd61|ENSMUSG00000029607.8|ankyrin repeat domain 61
mm10_v2_chr3_-_138131356_138131381	0.552774	Pitx2_Otx2	ENSMUST00000029805.8|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr17_+_29090969_29091020	0.552534	Pitx2_Otx2	ENSMUST00000119901.1|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr11_-_6520894_6520969	0.551584	Pitx2_Otx2	ENSMUST00000003459.3|Myo1g|ENSMUSG00000020437.6|myosin IG
mm10_v2_chr5_-_146963742_146963805	0.551511	Pitx2_Otx2	ENSMUST00000125217.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000110564.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000066675.3|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000016654.2|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000110566.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000140526.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3
mm10_v2_chr16_+_32419696_32419753	0.549921	Pitx2_Otx2	ENSMUST00000014220.8|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2 	ENSMUST00000080316.7|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2
mm10_v2_chr7_+_120635176_120635251	0.548198	Pitx2_Otx2	ENSMUST00000033176.5|Uqcrc2|ENSMUSG00000030884.5|ubiquinol cytochrome c reductase core protein 2
mm10_v2_chr1_-_119913162_119913208	0.546712	Pitx2_Otx2	ENSMUST00000037906.5|Tmem177|ENSMUSG00000036975.5|transmembrane protein 177
mm10_v2_chr11_-_53430417_53430434	0.546406	Pitx2_Otx2	ENSMUST00000109019.1|Uqcrq|ENSMUSG00000044894.8|ubiquinol-cytochrome c reductase, complex III subunit VII
mm10_v2_chrM_+_7005_7022	0.542477	Pitx2_Otx2	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr2_-_163472561_163472635	0.539165	Pitx2_Otx2	ENSMUST00000109418.1|Fitm2|ENSMUSG00000048486.6|fat storage-inducing transmembrane protein 2
mm10_v2_chr11_-_3976778_3976778	0.538907	Pitx2_Otx2	ENSMUST00000042344.1|4930556J24Rik|ENSMUSG00000034493.1|RIKEN cDNA 4930556J24 gene
mm10_v2_chr4_-_150909428_150909651	0.537729	Pitx2_Otx2	ENSMUST00000128075.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000105674.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000105673.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr7_-_34168516_34168582	0.536207	Pitx2_Otx2	ENSMUST00000102746.4|Uba2|ENSMUSG00000052997.9|ubiquitin-like modifier activating enzyme 2
mm10_v2_chr1_+_166130238_166130424	0.53366	Pitx2_Otx2	ENSMUST00000060833.7|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane) 	ENSMUST00000166159.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr7_-_16285454_16285536	0.530787	Pitx2_Otx2	ENSMUST00000174270.1|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9
mm10_v2_chr4_+_132308668_132308693	0.526193	Pitx2_Otx2	ENSMUST00000137343.1|Snhg12|ENSMUSG00000086290.2|small nucleolar RNA host gene 12 	ENSMUST00000144705.1|Snhg12|ENSMUSG00000086290.2|small nucleolar RNA host gene 12 	ENSMUST00000153474.2|Snhg12|ENSMUSG00000086290.2|small nucleolar RNA host gene 12 	ENSMUST00000126380.2|Snhg12|ENSMUSG00000086290.2|small nucleolar RNA host gene 12
mm10_v2_chr17_+_35424870_35424885	0.525818	Pitx2_Otx2	ENSMUST00000113879.3|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr9_+_46273064_46273208	0.524608	Pitx2_Otx2	ENSMUST00000156440.1|Zfp259|ENSMUSG00000032078.10|zinc finger protein 259 	ENSMUST00000034583.6|Zfp259|ENSMUSG00000032078.10|zinc finger protein 259 	ENSMUST00000114552.3|Zfp259|ENSMUSG00000032078.10|zinc finger protein 259
mm10_v2_chr3_+_133338936_133339109	0.523677	Pitx2_Otx2	ENSMUST00000150386.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000125858.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chr11_+_46235460_46235531	0.522425	Pitx2_Otx2	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chrX_-_150459128_150459157	0.522366	Pitx2_Otx2	ENSMUST00000173996.1|Tmem29|ENSMUSG00000041353.6|transmembrane protein 29
mm10_v2_chr5_+_124483165_124483202	0.521593	Pitx2_Otx2	ENSMUST00000136567.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr19_+_4154606_4154629	0.52075	Pitx2_Otx2	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr11_-_97782377_97782399	0.519653	Pitx2_Otx2	ENSMUST00000128801.1|Rpl23|ENSMUSG00000071415.6|ribosomal protein L23
mm10_v2_chr4_+_152325831_152325876	0.518584	Pitx2_Otx2	ENSMUST00000103191.4|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22 	ENSMUST00000139685.1|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22
mm10_v2_chr17_-_31519914_31519980	0.515844	Pitx2_Otx2	ENSMUST00000167419.1|Wdr4|ENSMUSG00000024037.6|WD repeat domain 4 	ENSMUST00000171291.1|Wdr4|ENSMUSG00000024037.6|WD repeat domain 4
mm10_v2_chr19_-_5394385_5394402	0.514173	Pitx2_Otx2	ENSMUST00000044527.4|Tsga10ip|ENSMUSG00000039330.4|testis specific 10 interacting protein
mm10_v2_chr3_-_16006332_16006361	0.514056	Pitx2_Otx2	ENSMUST00000108347.2|Gm5150|ENSMUSG00000078780.2|predicted gene 5150
mm10_v2_chr1_-_153487639_153487662	0.513659	Pitx2_Otx2	ENSMUST00000042141.5|Dhx9|ENSMUSG00000042699.5|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm10_v2_chr1_-_10038106_10038169	0.510637	Pitx2_Otx2	ENSMUST00000027050.3|Cops5|ENSMUSG00000025917.3|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm10_v2_chr5_+_34525797_34525869	0.5102	Pitx2_Otx2	ENSMUST00000125817.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2 	ENSMUST00000067638.7|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr5_+_124483458_124483491	0.508492	Pitx2_Otx2	ENSMUST00000111453.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr9_+_20888175_20888239	0.508247	Pitx2_Otx2	ENSMUST00000004203.5|Ppan|ENSMUSG00000004100.5|peter pan homolog (Drosophila)
mm10_v2_chr16_-_91931643_91931687	0.505535	Pitx2_Otx2	ENSMUST00000023677.3|Atp5o|ENSMUSG00000022956.4|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
mm10_v2_chr2_+_91054009_91054038	0.502745	Pitx2_Otx2	ENSMUST00000067663.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr16_+_32186192_32186192	0.50044	Pitx2_Otx2	ENSMUST00000099990.3|Bex6|ENSMUSG00000075269.3|brain expressed gene 6
mm10_v2_chr14_+_73510014_73510055	0.496024	Pitx2_Otx2	ENSMUST00000022705.5|Med4|ENSMUSG00000022109.5|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm10_v2_chr17_-_32420965_32420986	0.495254	Pitx2_Otx2	ENSMUST00000170392.1|Pglyrp2|ENSMUSG00000079563.3|peptidoglycan recognition protein 2
mm10_v2_chr12_-_85288419_85288438	0.490617	Pitx2_Otx2	ENSMUST00000121930.1|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr7_-_141475131_141475168	0.488222	Pitx2_Otx2	ENSMUST00000043870.8|Polr2l|ENSMUSG00000038489.8|polymerase (RNA) II (DNA directed) polypeptide L
mm10_v2_chr2_+_157737401_157737490	0.48807	Pitx2_Otx2	ENSMUST00000029178.6|Ctnnbl1|ENSMUSG00000027649.9|catenin, beta like 1
mm10_v2_chr14_+_30549131_30549188	0.487822	Pitx2_Otx2	ENSMUST00000022529.6|Tkt|ENSMUSG00000021957.6|transketolase
mm10_v2_chr14_-_79390666_79390778	0.486527	Pitx2_Otx2	ENSMUST00000022597.7|Naa16|ENSMUSG00000022020.8|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm10_v2_chr1_+_16665189_16665264	0.486316	Pitx2_Otx2	ENSMUST00000177501.1|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70 	ENSMUST00000065373.5|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70
mm10_v2_chr11_-_102406783_102406955	0.480753	Pitx2_Otx2	ENSMUST00000155104.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000130436.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr7_-_44751050_44751050	0.480369	Pitx2_Otx2	ENSMUST00000126366.2|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473
mm10_v2_chr9_-_100486788_100486788	0.479822	Pitx2_Otx2	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr5_-_25705791_25705829	0.479006	Pitx2_Otx2	ENSMUST00000030773.7|Xrcc2|ENSMUSG00000028933.7|X-ray repair complementing defective repair in Chinese hamster cells 2
mm10_v2_chr15_+_41789495_41789527	0.477703	Pitx2_Otx2	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr11_-_82908360_82908411	0.474883	Pitx2_Otx2	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr5_+_76656512_76656512	0.474846	Pitx2_Otx2	ENSMUST00000086909.4|Gm10430|ENSMUSG00000072855.2|predicted gene 10430
mm10_v2_chr7_-_140116395_140116476	0.473883	Pitx2_Otx2	ENSMUST00000026538.6|Echs1|ENSMUSG00000025465.6|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm10_v2_chr10_-_93889758_93889826	0.473241	Pitx2_Otx2	ENSMUST00000181091.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000181217.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000047910.8|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000180688.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr10_+_43221505_43221600	0.473108	Pitx2_Otx2	ENSMUST00000159139.1|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chr3_-_63899373_63899407	0.472579	Pitx2_Otx2	ENSMUST00000161052.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr17_+_35424842_35424856	0.472179	Pitx2_Otx2	ENSMUST00000174699.1|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr14_+_3395093_3395156	0.471137	Pitx2_Otx2	ENSMUST00000112728.2|Gm10413|ENSMUSG00000095533.1|predicted gene 10413 	ENSMUST00000177913.1|Gm10413|ENSMUSG00000095533.1|predicted gene 10413
mm10_v2_chr14_+_3634512_3634575	0.471137	Pitx2_Otx2	ENSMUST00000112802.2|Gm3012|ENSMUSG00000095368.1|predicted gene 3012 	ENSMUST00000179486.1|Gm3012|ENSMUSG00000095368.1|predicted gene 3012
mm10_v2_chr7_-_81345189_81345254	0.470926	Pitx2_Otx2	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr9_+_64960892_64960937	0.470378	Pitx2_Otx2	ENSMUST00000037504.5|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr13_-_54399246_54399334	0.467803	Pitx2_Otx2	ENSMUST00000124238.1|Gm16248|ENSMUSG00000086137.1|predicted gene 16248
mm10_v2_chr2_+_91054054_91054114	0.467675	Pitx2_Otx2	ENSMUST00000002171.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3 	ENSMUST00000111441.3|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr8_+_72240315_72240346	0.466915	Pitx2_Otx2	ENSMUST00000126885.1|Ap1m1|ENSMUSG00000003033.8|adaptor-related protein complex AP-1, mu subunit 1
mm10_v2_chr8_+_85026833_85026899	0.466884	Pitx2_Otx2	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr13_-_77131276_77131329	0.465679	Pitx2_Otx2	ENSMUST00000159300.1|Ankrd32|ENSMUSG00000021597.10|ankyrin repeat domain 32
mm10_v2_chr11_+_6389061_6389080	0.463389	Pitx2_Otx2	ENSMUST00000109787.1|Zmiz2|ENSMUSG00000041164.9|zinc finger, MIZ-type containing 2
mm10_v2_chr4_-_19922599_19922614	0.462745	Pitx2_Otx2	ENSMUST00000029900.5|Atp6v0d2|ENSMUSG00000028238.6|ATPase, H+ transporting, lysosomal V0 subunit D2
mm10_v2_chr3_-_86142684_86142702	0.462541	Pitx2_Otx2	ENSMUST00000029722.6|Rps3a1|ENSMUSG00000028081.6|ribosomal protein S3A1
mm10_v2_chr3_+_10088173_10088173	0.461237	Pitx2_Otx2	ENSMUST00000061419.7|Gm9833|ENSMUSG00000049230.7|predicted gene 9833
mm10_v2_chr11_+_60454587_60454657	0.461026	Pitx2_Otx2	ENSMUST00000018568.3|Drg2|ENSMUSG00000020537.3|developmentally regulated GTP binding protein 2
mm10_v2_chr6_-_29609811_29609887	0.460399	Pitx2_Otx2	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr1_-_128102412_128102485	0.460088	Pitx2_Otx2	ENSMUST00000112538.1|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3 	ENSMUST00000086614.5|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3
mm10_v2_chr5_+_100798627_100798770	0.459179	Pitx2_Otx2	ENSMUST00000016977.8|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112898.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112901.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C
mm10_v2_chr11_+_98446826_98446869	0.458583	Pitx2_Otx2	ENSMUST00000019456.4|Grb7|ENSMUSG00000019312.4|growth factor receptor bound protein 7
mm10_v2_chr4_-_141790891_141790931	0.458427	Pitx2_Otx2	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr13_-_97137877_97137926	0.457262	Pitx2_Otx2	ENSMUST00000073456.7|Nsa2|ENSMUSG00000060739.7|NSA2 ribosome biogenesis homolog (S. cerevisiae)
mm10_v2_chr9_+_69397897_69397928	0.456833	Pitx2_Otx2	ENSMUST00000034761.8|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000125938.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr3_-_97610156_97610222	0.45671	Pitx2_Otx2	ENSMUST00000029730.4|Chd1l|ENSMUSG00000028089.4|chromodomain helicase DNA binding protein 1-like
mm10_v2_chr10_-_86011833_86011896	0.455086	Pitx2_Otx2	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr10_-_40302186_40302206	0.454568	Pitx2_Otx2	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr5_+_109940426_109940426	0.453573	Pitx2_Otx2	ENSMUST00000170826.1|Gm15446|ENSMUSG00000090015.2|predicted gene 15446
mm10_v2_chr8_-_22398588_22398621	0.453552	Pitx2_Otx2	ENSMUST00000033871.6|Slc25a15|ENSMUSG00000031482.8|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm10_v2_chr14_-_8172986_8173003	0.45354	Pitx2_Otx2	ENSMUST00000022268.8|Pdhb|ENSMUSG00000021748.8|pyruvate dehydrogenase (lipoamide) beta
mm10_v2_chr9_+_99575776_99575829	0.45189	Pitx2_Otx2	ENSMUST00000066650.5|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae) 	ENSMUST00000148987.1|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae)
mm10_v2_chr7_+_141447645_141447850	0.450164	Pitx2_Otx2	ENSMUST00000106004.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2 	ENSMUST00000106003.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2
mm10_v2_chrX_-_53269786_53269858	0.44753	Pitx2_Otx2	ENSMUST00000114841.1|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B 	ENSMUST00000071023.5|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B
mm10_v2_chr16_+_38362234_38362251	0.442079	Pitx2_Otx2	ENSMUST00000114739.1|Popdc2|ENSMUSG00000022803.6|popeye domain containing 2
mm10_v2_chr10_+_82812123_82812209	0.440684	Pitx2_Otx2	ENSMUST00000178540.1|1700028I16Rik|ENSMUSG00000056821.7|RIKEN cDNA 1700028I16 gene 	ENSMUST00000076984.6|1700028I16Rik|ENSMUSG00000056821.7|RIKEN cDNA 1700028I16 gene
mm10_v2_chr17_-_36642661_36642666	0.43883	Pitx2_Otx2	ENSMUST00000087165.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9 	ENSMUST00000087167.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9
mm10_v2_chr5_+_135369942_135369997	0.438506	Pitx2_Otx2	ENSMUST00000000940.8|Nsun5|ENSMUSG00000000916.9|NOL1/NOP2/Sun domain family, member 5
mm10_v2_chr15_+_81663889_81663958	0.438456	Pitx2_Otx2	ENSMUST00000023029.8|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000174229.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000172748.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila)
mm10_v2_chr5_-_17888884_17888959	0.438304	Pitx2_Otx2	ENSMUST00000169095.1|Cd36|ENSMUSG00000002944.9|CD36 antigen
mm10_v2_chr1_-_177796451_177796514	0.43773	Pitx2_Otx2	ENSMUST00000016105.8|Adss|ENSMUSG00000015961.8|adenylosuccinate synthetase, non muscle
mm10_v2_chr2_-_136891131_136891186	0.437641	Pitx2_Otx2	ENSMUST00000144275.1|Mkks|ENSMUSG00000027274.10|McKusick-Kaufman syndrome
mm10_v2_chr11_-_58801944_58801968	0.43736	Pitx2_Otx2	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr11_+_70054334_70054360	0.436773	Pitx2_Otx2	ENSMUST00000018699.6|Asgr1|ENSMUSG00000020884.9|asialoglycoprotein receptor 1 	ENSMUST00000108585.2|Asgr1|ENSMUSG00000020884.9|asialoglycoprotein receptor 1
mm10_v2_chr11_+_73047783_73047902	0.434732	Pitx2_Otx2	ENSMUST00000021135.3|1200014J11Rik|ENSMUSG00000020783.8|RIKEN cDNA 1200014J11 gene
mm10_v2_chr9_+_64960814_64960843	0.434173	Pitx2_Otx2	ENSMUST00000170517.1|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr5_+_25246775_25246802	0.431755	Pitx2_Otx2	ENSMUST00000144971.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr14_-_18894255_18894282	0.430435	Pitx2_Otx2	ENSMUST00000124353.1|Ube2e2|ENSMUSG00000058317.5|ubiquitin-conjugating enzyme E2E 2
mm10_v2_chr12_+_87618869_87618869	0.426473	Pitx2_Otx2	ENSMUST00000164838.2|Gm4027|ENSMUSG00000092019.2|predicted gene 4027
mm10_v2_chr10_-_71285234_71285262	0.426409	Pitx2_Otx2	ENSMUST00000020085.6|Ube2d1|ENSMUSG00000019927.6|ubiquitin-conjugating enzyme E2D 1
mm10_v2_chr16_-_8792302_8792326	0.425873	Pitx2_Otx2	ENSMUST00000160405.1|Usp7|ENSMUSG00000022710.11|ubiquitin specific peptidase 7
mm10_v2_chr7_-_19921139_19921160	0.424881	Pitx2_Otx2	ENSMUST00000043517.7|Pvr|ENSMUSG00000040511.7|poliovirus receptor
mm10_v2_chr9_+_120571498_120571522	0.424596	Pitx2_Otx2	ENSMUST00000165532.1|Rpl14|ENSMUSG00000025794.8|ribosomal protein L14
mm10_v2_chr10_-_87493651_87493666	0.42439	Pitx2_Otx2	ENSMUST00000020243.7|Ascl1|ENSMUSG00000020052.7|achaete-scute complex homolog 1 (Drosophila)
mm10_v2_chr5_+_3343893_3343945	0.423707	Pitx2_Otx2	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr19_-_4191035_4191069	0.423398	Pitx2_Otx2	ENSMUST00000045864.2|Tbc1d10c|ENSMUSG00000040247.5|TBC1 domain family, member 10c
mm10_v2_chr17_+_50698525_50698553	0.423292	Pitx2_Otx2	ENSMUST00000061681.7|Gm7334|ENSMUSG00000044645.7|predicted gene 7334
mm10_v2_chr2_-_103797617_103797662	0.422492	Pitx2_Otx2	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr9_+_66060169_66060273	0.419665	Pitx2_Otx2	ENSMUST00000034947.5|Ppib|ENSMUSG00000032383.6|peptidylprolyl isomerase B
mm10_v2_chr9_+_106499967_106499972	0.419357	Pitx2_Otx2	ENSMUST00000164965.1|Iqcf1|ENSMUSG00000066383.5|IQ motif containing F1 	ENSMUST00000085114.5|Iqcf1|ENSMUSG00000066383.5|IQ motif containing F1
mm10_v2_chr11_-_97782409_97782437	0.418768	Pitx2_Otx2	ENSMUST00000103146.4|Rpl23|ENSMUSG00000071415.6|ribosomal protein L23
mm10_v2_chr7_+_110018301_110018425	0.416679	Pitx2_Otx2	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr8_+_122376676_122376701	0.415309	Pitx2_Otx2	ENSMUST00000176629.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr1_-_162859919_162859973	0.415029	Pitx2_Otx2	ENSMUST00000134098.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1 	ENSMUST00000111518.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr5_-_23844085_23844161	0.414082	Pitx2_Otx2	ENSMUST00000030851.6|Tomm7|ENSMUSG00000028998.6|translocase of outer mitochondrial membrane 7 homolog (yeast)
mm10_v2_chr1_+_178187721_178187847	0.412879	Pitx2_Otx2	ENSMUST00000159284.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr5_+_24985840_24985862	0.410998	Pitx2_Otx2	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr6_+_115544664_115544712	0.409994	Pitx2_Otx2	ENSMUST00000040234.7|Tsen2|ENSMUSG00000042389.7|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm10_v2_chr9_-_70038075_70038093	0.409492	Pitx2_Otx2	ENSMUST00000034751.5|Gcnt3|ENSMUSG00000032226.5|glucosaminyl (N-acetyl) transferase 3, mucin type
mm10_v2_chr12_+_87816577_87816577	0.409218	Pitx2_Otx2	ENSMUST00000110149.1|BB287469|ENSMUSG00000079031.1|expressed sequence BB287469
mm10_v2_chr5_+_115605642_115605696	0.408816	Pitx2_Otx2	ENSMUST00000094427.3|Gcn1l1|ENSMUSG00000041638.12|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
mm10_v2_chr2_+_80638798_80638834	0.404105	Pitx2_Otx2	ENSMUST00000028382.6|Nup35|ENSMUSG00000026999.8|nucleoporin 35 	ENSMUST00000124377.1|Nup35|ENSMUSG00000026999.8|nucleoporin 35
mm10_v2_chr17_-_32388885_32389116	0.402539	Pitx2_Otx2	ENSMUST00000087703.5|Wiz|ENSMUSG00000024050.9|widely-interspaced zinc finger motifs 	ENSMUST00000170603.1|Wiz|ENSMUSG00000024050.9|widely-interspaced zinc finger motifs
mm10_v2_chr10_+_43221466_43221501	0.400328	Pitx2_Otx2	ENSMUST00000095725.4|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chr13_-_100104064_100104082	0.400065	Pitx2_Otx2	ENSMUST00000038104.5|Bdp1|ENSMUSG00000049658.7|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm10_v2_chr1_+_85575676_85575676	0.39929	Pitx2_Otx2	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr5_-_34660068_34660148	0.397311	Pitx2_Otx2	ENSMUST00000041364.9|Nop14|ENSMUSG00000036693.9|NOP14 nucleolar protein
mm10_v2_chr6_+_29917005_29917028	0.397017	Pitx2_Otx2	ENSMUST00000115224.2|Strip2|ENSMUSG00000039629.8|striatin interacting protein 2 	ENSMUST00000046028.6|Strip2|ENSMUSG00000039629.8|striatin interacting protein 2
mm10_v2_chr7_-_118995211_118995219	0.396156	Pitx2_Otx2	ENSMUST00000008878.8|Gprc5b|ENSMUSG00000008734.8|G protein-coupled receptor, family C, group 5, member B
mm10_v2_chr18_+_9958147_9958186	0.392705	Pitx2_Otx2	ENSMUST00000025137.7|Thoc1|ENSMUSG00000024287.7|THO complex 1
mm10_v2_chr4_-_123718181_123718195	0.39237	Pitx2_Otx2	ENSMUST00000137312.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5 	ENSMUST00000106206.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr13_-_90089060_90089092	0.391773	Pitx2_Otx2	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chr14_-_20496780_20496901	0.3916	Pitx2_Otx2	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr14_+_3188255_3188318	0.390489	Pitx2_Otx2	ENSMUST00000100920.3|Gm5795|ENSMUSG00000079409.2|predicted gene 5795 	ENSMUST00000171150.1|Gm5795|ENSMUSG00000079409.2|predicted gene 5795 	ENSMUST00000166275.1|Gm5795|ENSMUSG00000079409.2|predicted gene 5795
mm10_v2_chr11_+_74770822_74770876	0.389832	Pitx2_Otx2	ENSMUST00000141755.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16 	ENSMUST00000010698.6|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr12_+_111678094_111678140	0.389792	Pitx2_Otx2	ENSMUST00000084947.3|Trmt61a|ENSMUSG00000060950.5|tRNA methyltransferase 61A 	ENSMUST00000168338.1|Trmt61a|ENSMUSG00000060950.5|tRNA methyltransferase 61A
mm10_v2_chr12_+_84362029_84362064	0.389335	Pitx2_Otx2	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr10_-_93891141_93891202	0.388445	Pitx2_Otx2	ENSMUST00000180840.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr4_+_125029992_125030070	0.385804	Pitx2_Otx2	ENSMUST00000030684.7|Gnl2|ENSMUSG00000028869.7|guanine nucleotide binding protein-like 2 (nucleolar)
mm10_v2_chr6_+_137735078_137735151	0.383953	Pitx2_Otx2	ENSMUST00000064910.6|Strap|ENSMUSG00000030224.10|serine/threonine kinase receptor associated protein
mm10_v2_chr17_-_45686899_45686923	0.383804	Pitx2_Otx2	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr2_-_6130117_6130211	0.382475	Pitx2_Otx2	ENSMUST00000126551.1|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000054254.5|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000114942.2|Proser2|ENSMUSG00000045319.7|proline and serine rich 2
mm10_v2_chr13_-_100552442_100552498	0.380227	Pitx2_Otx2	ENSMUST00000159515.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000160859.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000069756.4|Ocln|ENSMUSG00000021638.6|occludin
mm10_v2_chrX_-_94212638_94212662	0.378064	Pitx2_Otx2	ENSMUST00000113922.1|Eif2s3x|ENSMUSG00000035150.9|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm10_v2_chr2_+_166793767_166793813	0.377387	Pitx2_Otx2	ENSMUST00000151826.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr19_+_6080029_6080042	0.376397	Pitx2_Otx2	ENSMUST00000149347.1|BC048609|ENSMUSG00000047733.4|cDNA sequence BC048609 	ENSMUST00000143303.1|BC048609|ENSMUSG00000047733.4|cDNA sequence BC048609
mm10_v2_chr5_+_137778849_137778935	0.375882	Pitx2_Otx2	ENSMUST00000126126.1|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35 	ENSMUST00000031739.4|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35
mm10_v2_chr6_+_113046225_113046369	0.375864	Pitx2_Otx2	ENSMUST00000032398.8|Thumpd3|ENSMUSG00000030264.8|THUMP domain containing 3 	ENSMUST00000155378.1|Thumpd3|ENSMUSG00000030264.8|THUMP domain containing 3
mm10_v2_chr2_-_118762607_118762666	0.375544	Pitx2_Otx2	ENSMUST00000059997.8|A430105I19Rik|ENSMUSG00000045838.8|RIKEN cDNA A430105I19 gene
mm10_v2_chr14_+_65605267_65605267	0.375396	Pitx2_Otx2	ENSMUST00000079469.6|Nuggc|ENSMUSG00000061356.7|nuclear GTPase, germinal center associated
mm10_v2_chr18_+_24709436_24709447	0.374224	Pitx2_Otx2	ENSMUST00000037097.7|Fhod3|ENSMUSG00000034295.9|formin homology 2 domain containing 3
mm10_v2_chr7_-_102494773_102494773	0.373907	Pitx2_Otx2	ENSMUST00000058750.3|Olfr545|ENSMUSG00000044824.5|olfactory receptor 545
mm10_v2_chr4_+_41903610_41903610	0.372555	Pitx2_Otx2	ENSMUST00000098128.3|Gm21541|ENSMUSG00000094065.1|predicted gene, 21541
mm10_v2_chr2_-_34755229_34755252	0.372457	Pitx2_Otx2	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr14_-_79868398_79868398	0.371927	Pitx2_Otx2	ENSMUST00000179430.1|Gm10845|ENSMUSG00000095959.1|predicted gene 10845
mm10_v2_chr13_+_58281183_58281196	0.371156	Pitx2_Otx2	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr5_+_123228190_123228301	0.371153	Pitx2_Otx2	ENSMUST00000100729.4|Psmd9|ENSMUSG00000029440.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
mm10_v2_chr13_+_67779754_67779754	0.369176	Pitx2_Otx2	ENSMUST00000164936.2|Zfp493|ENSMUSG00000090659.2|zinc finger protein 493 	ENSMUST00000181319.1|Zfp493|ENSMUSG00000090659.2|zinc finger protein 493
mm10_v2_chr14_-_7332395_7332395	0.36853	Pitx2_Otx2	ENSMUST00000100886.3|Gm5797|ENSMUSG00000072726.3|predicted gene 5797
mm10_v2_chr4_+_155451570_155451570	0.36697	Pitx2_Otx2	ENSMUST00000135407.1|C030017K20Rik|ENSMUSG00000078490.3|RIKEN cDNA C030017K20 gene 	ENSMUST00000105619.1|C030017K20Rik|ENSMUSG00000078490.3|RIKEN cDNA C030017K20 gene
mm10_v2_chr3_+_28805436_28805521	0.36662	Pitx2_Otx2	ENSMUST00000043867.5|Rpl22l1|ENSMUSG00000039221.5|ribosomal protein L22 like 1
mm10_v2_chr5_-_90223923_90224020	0.366248	Pitx2_Otx2	ENSMUST00000118816.1|Cox18|ENSMUSG00000035505.8|cytochrome c oxidase assembly protein 18 	ENSMUST00000048363.7|Cox18|ENSMUSG00000035505.8|cytochrome c oxidase assembly protein 18
mm10_v2_chr11_-_86257518_86257550	0.365311	Pitx2_Otx2	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr2_+_181319806_181319963	0.365056	Pitx2_Otx2	ENSMUST00000153112.1|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1
mm10_v2_chr2_-_93957040_93957054	0.364284	Pitx2_Otx2	ENSMUST00000148314.2|Gm13889|ENSMUSG00000087006.2|predicted gene 13889
mm10_v2_chr11_+_78261717_78261803	0.364116	Pitx2_Otx2	ENSMUST00000010421.6|2610507B11Rik|ENSMUSG00000010277.7|RIKEN cDNA 2610507B11 gene
mm10_v2_chr11_+_121204420_121204441	0.360867	Pitx2_Otx2	ENSMUST00000038831.8|Hexdc|ENSMUSG00000039307.10|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing 	ENSMUST00000106117.1|Hexdc|ENSMUSG00000039307.10|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
mm10_v2_chr10_-_68278713_68278735	0.360708	Pitx2_Otx2	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr9_-_75559604_75559665	0.360537	Pitx2_Otx2	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr7_+_128003911_128004002	0.360259	Pitx2_Otx2	ENSMUST00000106248.1|Trim72|ENSMUSG00000042828.6|tripartite motif-containing 72
mm10_v2_chr6_+_42349826_42349837	0.359734	Pitx2_Otx2	ENSMUST00000070635.6|Zyx|ENSMUSG00000029860.10|zyxin
mm10_v2_chr4_+_156013835_156013849	0.358982	Pitx2_Otx2	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr8_-_93079965_93080017	0.358528	Pitx2_Otx2	ENSMUST00000109582.1|Ces1b|ENSMUSG00000078964.1|carboxylesterase 1B
mm10_v2_chr4_-_123718198_123718209	0.357688	Pitx2_Otx2	ENSMUST00000030401.7|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr14_+_65598546_65598546	0.357402	Pitx2_Otx2	ENSMUST00000150897.1|Nuggc|ENSMUSG00000061356.7|nuclear GTPase, germinal center associated
mm10_v2_chr10_-_62792243_62792368	0.35609	Pitx2_Otx2	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr10_-_77089428_77089477	0.355207	Pitx2_Otx2	ENSMUST00000156009.1|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr11_+_75999912_75999946	0.354672	Pitx2_Otx2	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr2_-_76360447_76360463	0.354239	Pitx2_Otx2	ENSMUST00000028430.5|Cyct|ENSMUSG00000056436.4|cytochrome c, testis
mm10_v2_chr2_+_163995503_163995503	0.354028	Pitx2_Otx2	ENSMUST00000131288.1|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr7_-_43489967_43490075	0.353712	Pitx2_Otx2	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr5_+_124483128_124483158	0.351945	Pitx2_Otx2	ENSMUST00000031349.8|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr11_+_117782076_117782130	0.351516	Pitx2_Otx2	ENSMUST00000127080.1|Tmc8|ENSMUSG00000050106.11|transmembrane channel-like gene family 8
mm10_v2_chr2_-_140170528_140170569	0.351444	Pitx2_Otx2	ENSMUST00000046030.7|Esf1|ENSMUSG00000045624.9|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
mm10_v2_chr9_-_89092835_89092835	0.350792	Pitx2_Otx2	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr9_-_110101010_110101087	0.349636	Pitx2_Otx2	ENSMUST00000062368.6|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr4_+_108328136_108328180	0.348693	Pitx2_Otx2	ENSMUST00000131656.1|Selrc1|ENSMUSG00000048351.8|Sel1 repeat containing 1
mm10_v2_chr13_-_49147931_49148037	0.348571	Pitx2_Otx2	ENSMUST00000162581.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110097.2|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000049265.8|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000035538.6|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110096.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000091623.3|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2
mm10_v2_chr3_+_96629919_96629955	0.345658	Pitx2_Otx2	ENSMUST00000048915.6|Rbm8a|ENSMUSG00000038374.6|RNA binding motif protein 8a
mm10_v2_chr8_+_70718534_70718549	0.345473	Pitx2_Otx2	ENSMUST00000179347.1|Gm3336|ENSMUSG00000095026.1|predicted gene 3336
mm10_v2_chr13_-_41220395_41220412	0.344935	Pitx2_Otx2	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr1_-_172895048_172895063	0.342221	Pitx2_Otx2	ENSMUST00000027824.5|Apcs|ENSMUSG00000026542.5|serum amyloid P-component
mm10_v2_chr11_+_51261719_51261731	0.342142	Pitx2_Otx2	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chrM_+_3906_3926	0.338653	Pitx2_Otx2	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr11_-_116274197_116274217	0.338014	Pitx2_Otx2	ENSMUST00000021133.9|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr5_+_129895723_129895800	0.336854	Pitx2_Otx2	ENSMUST00000041466.7|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene 	ENSMUST00000077320.2|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene
mm10_v2_chr19_+_6226378_6226388	0.336664	Pitx2_Otx2	ENSMUST00000025698.7|Gpha2|ENSMUSG00000024784.7|glycoprotein hormone alpha 2 	ENSMUST00000113526.1|Gpha2|ENSMUSG00000024784.7|glycoprotein hormone alpha 2
mm10_v2_chr11_-_100620165_100620209	0.336271	Pitx2_Otx2	ENSMUST00000014339.8|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr9_-_73039644_73039674	0.336259	Pitx2_Otx2	ENSMUST00000184389.1|Pigb|ENSMUSG00000079469.4|phosphatidylinositol glycan anchor biosynthesis, class B
mm10_v2_chr10_+_51677756_51677789	0.334268	Pitx2_Otx2	ENSMUST00000122922.1|Rfx6|ENSMUSG00000019900.11|regulatory factor X, 6
mm10_v2_chr16_+_18836573_18836583	0.33372	Pitx2_Otx2	ENSMUST00000055413.6|2510002D24Rik|ENSMUSG00000071632.4|RIKEN cDNA 2510002D24 gene
mm10_v2_chr1_+_143739016_143739050	0.333105	Pitx2_Otx2	ENSMUST00000145969.1|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr1_+_9908638_9908670	0.332971	Pitx2_Otx2	ENSMUST00000171802.1|Mcmdc2|ENSMUSG00000046101.10|minichromosome maintenance domain containing 2 	ENSMUST00000052843.5|Mcmdc2|ENSMUSG00000046101.10|minichromosome maintenance domain containing 2 	ENSMUST00000125294.2|Mcmdc2|ENSMUSG00000046101.10|minichromosome maintenance domain containing 2 	ENSMUST00000140948.2|Mcmdc2|ENSMUSG00000046101.10|minichromosome maintenance domain containing 2
mm10_v2_chr1_+_15805639_15805675	0.332173	Pitx2_Otx2	ENSMUST00000027057.6|Terf1|ENSMUSG00000025925.8|telomeric repeat binding factor 1
mm10_v2_chr5_-_139775631_139775681	0.331727	Pitx2_Otx2	ENSMUST00000072607.4|Ints1|ENSMUSG00000029547.6|integrator complex subunit 1
mm10_v2_chr16_-_59553970_59553970	0.331191	Pitx2_Otx2	ENSMUST00000139989.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr7_-_114276107_114276125	0.330015	Pitx2_Otx2	ENSMUST00000033008.9|Psma1|ENSMUSG00000030751.11|proteasome (prosome, macropain) subunit, alpha type 1
mm10_v2_chr2_+_121506748_121506792	0.329192	Pitx2_Otx2	ENSMUST00000099473.3|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76 	ENSMUST00000110602.2|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76
mm10_v2_chr12_+_12262139_12262157	0.328773	Pitx2_Otx2	ENSMUST00000069066.6|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A 	ENSMUST00000069005.8|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A
mm10_v2_chr19_-_8798495_8798565	0.32876	Pitx2_Otx2	ENSMUST00000096261.3|Polr2g|ENSMUSG00000071662.3|polymerase (RNA) II (DNA directed) polypeptide G
mm10_v2_chr2_-_12419456_12419474	0.32768	Pitx2_Otx2	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr9_+_87022014_87022179	0.326354	Pitx2_Otx2	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr6_-_126849109_126849144	0.325743	Pitx2_Otx2	ENSMUST00000088194.4|Ndufa9|ENSMUSG00000000399.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
mm10_v2_chr7_-_99781488_99781488	0.3249	Pitx2_Otx2	ENSMUST00000065741.3|F730035P03Rik|ENSMUSG00000053360.3|RIKEN cDNA F730035P03 gene
mm10_v2_chr3_+_135348029_135348085	0.324784	Pitx2_Otx2	ENSMUST00000159658.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000078568.5|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000160460.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
mm10_v2_chr4_+_141213948_141213998	0.323303	Pitx2_Otx2	ENSMUST00000097813.2|Rsg1|ENSMUSG00000073733.4|REM2 and RAB-like small GTPase 1
mm10_v2_chr7_+_16309577_16309641	0.321193	Pitx2_Otx2	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr9_+_31386187_31386235	0.320985	Pitx2_Otx2	ENSMUST00000086167.5|Nfrkb|ENSMUSG00000042185.7|nuclear factor related to kappa B binding protein
mm10_v2_chr4_+_108834601_108834617	0.320984	Pitx2_Otx2	ENSMUST00000030296.8|Txndc12|ENSMUSG00000028567.8|thioredoxin domain containing 12 (endoplasmic reticulum)
mm10_v2_chr5_+_135725713_135725740	0.320775	Pitx2_Otx2	ENSMUST00000127096.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr8_+_18595131_18595186	0.31921	Pitx2_Otx2	ENSMUST00000039412.8|Mcph1|ENSMUSG00000039842.9|microcephaly, primary autosomal recessive 1
mm10_v2_chr17_-_83631892_83631934	0.318574	Pitx2_Otx2	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr8_+_70083509_70083547	0.318555	Pitx2_Otx2	ENSMUST00000007738.9|Hapln4|ENSMUSG00000007594.9|hyaluronan and proteoglycan link protein 4
mm10_v2_chr1_-_171360798_171360798	0.318435	Pitx2_Otx2	ENSMUST00000061878.4|Klhdc9|ENSMUSG00000045259.4|kelch domain containing 9
mm10_v2_chr9_-_50617428_50617467	0.317585	Pitx2_Otx2	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr16_-_38550173_38550258	0.316505	Pitx2_Otx2	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr3_-_10351313_10351342	0.316374	Pitx2_Otx2	ENSMUST00000108377.1|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1 	ENSMUST00000037839.5|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1
mm10_v2_chr14_-_45388772_45388836	0.315959	Pitx2_Otx2	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr5_-_99978914_99978966	0.313904	Pitx2_Otx2	ENSMUST00000112939.3|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000171786.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000072750.6|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000019128.8|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000172361.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D
mm10_v2_chr10_+_61417972_61417972	0.313201	Pitx2_Otx2	ENSMUST00000049339.6|Nodal|ENSMUSG00000037171.6|nodal
mm10_v2_chr5_+_90759299_90759367	0.313059	Pitx2_Otx2	ENSMUST00000031318.4|Cxcl5|ENSMUSG00000029371.6|chemokine (C-X-C motif) ligand 5
mm10_v2_chr10_+_58497918_58497970	0.312537	Pitx2_Otx2	ENSMUST00000036576.8|Ccdc138|ENSMUSG00000038010.8|coiled-coil domain containing 138
mm10_v2_chr2_-_152332639_152332678	0.312203	Pitx2_Otx2	ENSMUST00000028964.7|Rbck1|ENSMUSG00000027466.9|RanBP-type and C3HC4-type zinc finger containing 1
mm10_v2_chr5_+_99979061_99979061	0.312042	Pitx2_Otx2	ENSMUST00000046721.1|4930524J08Rik|ENSMUSG00000035364.1|RIKEN cDNA 4930524J08 gene
mm10_v2_chr15_+_103503261_103503298	0.311922	Pitx2_Otx2	ENSMUST00000023132.3|Pde1b|ENSMUSG00000022489.5|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm10_v2_chr10_+_80879720_80879720	0.311576	Pitx2_Otx2	ENSMUST00000105333.2|Tmprss9|ENSMUSG00000059406.7|transmembrane protease, serine 9
mm10_v2_chr11_-_121388186_121388267	0.311457	Pitx2_Otx2	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr1_-_120074023_120074074	0.309076	Pitx2_Otx2	ENSMUST00000056089.7|Tmem37|ENSMUSG00000050777.7|transmembrane protein 37
mm10_v2_chr7_-_4789541_4789656	0.308491	Pitx2_Otx2	ENSMUST00000168578.1|Tmem238|ENSMUSG00000030431.7|transmembrane protein 238
mm10_v2_chr15_-_85811090_85811248	0.30817	Pitx2_Otx2	ENSMUST00000125947.1|Cdpf1|ENSMUSG00000064284.6|cysteine rich, DPF motif domain containing 1
mm10_v2_chr19_-_7295394_7295468	0.306671	Pitx2_Otx2	ENSMUST00000025921.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr10_-_78487842_78487842	0.306367	Pitx2_Otx2	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr17_+_47769191_47769238	0.30616	Pitx2_Otx2	ENSMUST00000160373.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB 	ENSMUST00000159641.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr12_-_102423741_102423774	0.30521	Pitx2_Otx2	ENSMUST00000110020.1|Lgmn|ENSMUSG00000021190.8|legumain
mm10_v2_chr10_+_81384457_81384507	0.304357	Pitx2_Otx2	ENSMUST00000142346.1|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr11_-_78751656_78751729	0.303852	Pitx2_Otx2	ENSMUST00000059468.4|Fam58b|ENSMUSG00000049489.4|family with sequence similarity 58, member B
mm10_v2_chr8_-_68121527_68121637	0.303662	Pitx2_Otx2	ENSMUST00000178529.1|Gm21807|ENSMUSG00000095306.1|predicted gene, 21807
mm10_v2_chr4_-_108579330_108579352	0.302313	Pitx2_Otx2	ENSMUST00000079213.5|Prpf38a|ENSMUSG00000063800.5|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm10_v2_chr13_-_97747399_97747414	0.302246	Pitx2_Otx2	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr11_-_116694802_116694882	0.302095	Pitx2_Otx2	ENSMUST00000079545.5|St6galnac2|ENSMUSG00000057286.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
mm10_v2_chr11_+_88204396_88204444	0.297745	Pitx2_Otx2	ENSMUST00000118784.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000139170.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000107915.3|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000144070.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23
mm10_v2_chr11_-_116274102_116274138	0.296884	Pitx2_Otx2	ENSMUST00000106425.3|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr4_-_141598206_141598229	0.296121	Pitx2_Otx2	ENSMUST00000131317.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000006381.4|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000129602.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr4_+_127021311_127021339	0.295912	Pitx2_Otx2	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr4_+_45203921_45203931	0.295907	Pitx2_Otx2	ENSMUST00000107804.1|Frmpd1|ENSMUSG00000035615.6|FERM and PDZ domain containing 1
mm10_v2_chr19_+_10206033_10206033	0.294041	Pitx2_Otx2	ENSMUST00000166412.1|Tmem258|ENSMUSG00000036372.8|transmembrane protein 258
mm10_v2_chr3_-_95855860_95855889	0.29358	Pitx2_Otx2	ENSMUST00000015892.7|Prpf3|ENSMUSG00000015748.7|PRP3 pre-mRNA processing factor 3 homolog (yeast)
mm10_v2_chr1_-_162859684_162859735	0.292934	Pitx2_Otx2	ENSMUST00000131058.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr7_+_27553244_27553302	0.292496	Pitx2_Otx2	ENSMUST00000067386.7|2310022A10Rik|ENSMUSG00000049643.9|RIKEN cDNA 2310022A10 gene
mm10_v2_chr11_-_106999482_106999541	0.291171	Pitx2_Otx2	ENSMUST00000018506.6|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr4_+_155067016_155067064	0.290773	Pitx2_Otx2	ENSMUST00000103180.3|Pex10|ENSMUSG00000029047.7|peroxisomal biogenesis factor 10
mm10_v2_chr12_-_28623282_28623296	0.290351	Pitx2_Otx2	ENSMUST00000036136.7|Colec11|ENSMUSG00000036655.7|collectin sub-family member 11
mm10_v2_chr17_+_56770258_56770305	0.289711	Pitx2_Otx2	ENSMUST00000168666.2|Prr22|ENSMUSG00000090273.2|proline rich 22
mm10_v2_chr7_+_43609907_43609907	0.28958	Pitx2_Otx2	ENSMUST00000116324.2|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819
mm10_v2_chr4_+_133176336_133176371	0.289509	Pitx2_Otx2	ENSMUST00000105912.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr4_+_137453253_137453316	0.289183	Pitx2_Otx2	ENSMUST00000048893.3|1700013G24Rik|ENSMUSG00000041399.3|RIKEN cDNA 1700013G24 gene
mm10_v2_chr11_+_119913423_119913441	0.288938	Pitx2_Otx2	ENSMUST00000132197.1|Chmp6|ENSMUSG00000025371.6|charged multivesicular body protein 6
mm10_v2_chr4_-_132463873_132463929	0.288574	Pitx2_Otx2	ENSMUST00000102567.3|Med18|ENSMUSG00000066042.4|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)
mm10_v2_chr2_+_104590453_104590533	0.287175	Pitx2_Otx2	ENSMUST00000028599.7|Cstf3|ENSMUSG00000027176.8|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm10_v2_chr11_-_78080360_78080387	0.287104	Pitx2_Otx2	ENSMUST00000021183.3|Eral1|ENSMUSG00000020832.8|Era (G-protein)-like 1 (E. coli)
mm10_v2_chr9_-_107710475_107710475	0.286886	Pitx2_Otx2	ENSMUST00000080560.3|Sema3f|ENSMUSG00000034684.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm10_v2_chr7_-_101845300_101845339	0.286833	Pitx2_Otx2	ENSMUST00000094141.5|Folr2|ENSMUSG00000032725.9|folate receptor 2 (fetal)
mm10_v2_chr3_-_88456397_88456441	0.285986	Pitx2_Otx2	ENSMUST00000141471.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000123753.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr9_-_123678782_123678850	0.285942	Pitx2_Otx2	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr19_+_8892987_8893052	0.285087	Pitx2_Otx2	ENSMUST00000096249.5|Ints5|ENSMUSG00000071652.5|integrator complex subunit 5
mm10_v2_chr13_+_67863324_67863328	0.284848	Pitx2_Otx2	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chr1_+_166130467_166130479	0.283938	Pitx2_Otx2	ENSMUST00000166860.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr7_-_126792469_126792478	0.283872	Pitx2_Otx2	ENSMUST00000032936.6|Ppp4c|ENSMUSG00000030697.6|protein phosphatase 4, catalytic subunit
mm10_v2_chr15_+_39112868_39112915	0.283568	Pitx2_Otx2	ENSMUST00000022909.8|Dcaf13|ENSMUSG00000022300.8|DDB1 and CUL4 associated factor 13
mm10_v2_chr2_+_181497165_181497216	0.282059	Pitx2_Otx2	ENSMUST00000149163.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000000844.8|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000184849.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000108800.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000069712.2|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2
mm10_v2_chr18_-_37638719_37638737	0.281907	Pitx2_Otx2	ENSMUST00000058635.2|Slc25a2|ENSMUSG00000050304.2|solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2
mm10_v2_chr12_+_24498570_24498587	0.28064	Pitx2_Otx2	ENSMUST00000075954.7|Taf1b|ENSMUSG00000059669.7|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B
mm10_v2_chr11_-_84513485_84513553	0.279051	Pitx2_Otx2	ENSMUST00000018841.2|Aatf|ENSMUSG00000018697.8|apoptosis antagonizing transcription factor
mm10_v2_chr9_-_27155418_27155425	0.278945	Pitx2_Otx2	ENSMUST00000167074.1|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3 	ENSMUST00000034472.8|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3
mm10_v2_chr9_-_22130598_22130640	0.277696	Pitx2_Otx2	ENSMUST00000115315.2|Acp5|ENSMUSG00000001348.8|acid phosphatase 5, tartrate resistant
mm10_v2_chr6_+_42350000_42350076	0.277467	Pitx2_Otx2	ENSMUST00000164375.1|Zyx|ENSMUSG00000029860.10|zyxin
mm10_v2_chr3_-_96197580_96197634	0.277208	Pitx2_Otx2	ENSMUST00000016087.3|Bola1|ENSMUSG00000015943.5|bolA-like 1 (E. coli)
mm10_v2_chr8_-_117671526_117671555	0.276628	Pitx2_Otx2	ENSMUST00000037955.7|Sdr42e1|ENSMUSG00000034308.7|short chain dehydrogenase/reductase family 42E, member 1
mm10_v2_chr8_-_116993459_116993538	0.276102	Pitx2_Otx2	ENSMUST00000040484.5|Gcsh|ENSMUSG00000034424.5|glycine cleavage system protein H (aminomethyl carrier)
mm10_v2_chr3_-_95855753_95855822	0.275825	Pitx2_Otx2	ENSMUST00000161476.1|Prpf3|ENSMUSG00000015748.7|PRP3 pre-mRNA processing factor 3 homolog (yeast)
mm10_v2_chr3_+_32515295_32515295	0.275445	Pitx2_Otx2	ENSMUST00000029203.7|Zfp639|ENSMUSG00000027667.8|zinc finger protein 639
mm10_v2_chr11_-_33843526_33843629	0.274633	Pitx2_Otx2	ENSMUST00000065970.5|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1 	ENSMUST00000109340.2|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1
mm10_v2_chr10_-_53630439_53630439	0.274432	Pitx2_Otx2	ENSMUST00000075540.5|Mcm9|ENSMUSG00000058298.7|minichromosome maintenance complex component 9
mm10_v2_chr8_+_58912257_58912257	0.273084	Pitx2_Otx2	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr11_-_69895523_69895560	0.272367	Pitx2_Otx2	ENSMUST00000001631.6|Acap1|ENSMUSG00000001588.6|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
mm10_v2_chrX_-_74353575_74353622	0.271452	Pitx2_Otx2	ENSMUST00000114152.1|Lage3|ENSMUSG00000015289.4|L antigen family, member 3 	ENSMUST00000114153.1|Lage3|ENSMUSG00000015289.4|L antigen family, member 3 	ENSMUST00000015433.3|Lage3|ENSMUSG00000015289.4|L antigen family, member 3
mm10_v2_chr11_-_106999369_106999473	0.27133	Pitx2_Otx2	ENSMUST00000106768.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2 	ENSMUST00000144834.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr4_+_135911808_135911826	0.271122	Pitx2_Otx2	ENSMUST00000068830.3|Cnr2|ENSMUSG00000062585.5|cannabinoid receptor 2 (macrophage)
mm10_v2_chr6_+_87009836_87009893	0.267045	Pitx2_Otx2	ENSMUST00000032060.8|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENSMUST00000117583.1|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENSMUST00000144776.1|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
mm10_v2_chr1_-_185329331_185329401	0.265325	Pitx2_Otx2	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr1_-_39651165_39651196	0.262714	Pitx2_Otx2	ENSMUST00000053355.4|Creg2|ENSMUSG00000050967.4|cellular repressor of E1A-stimulated genes 2
mm10_v2_chr9_-_96478596_96478622	0.259072	Pitx2_Otx2	ENSMUST00000071301.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr7_-_134232005_134232054	0.258883	Pitx2_Otx2	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr9_+_32116040_32116136	0.257476	Pitx2_Otx2	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr13_+_112467504_112467593	0.257438	Pitx2_Otx2	ENSMUST00000183868.1|Il6st|ENSMUSG00000021756.6|interleukin 6 signal transducer
mm10_v2_chr15_+_98167806_98167873	0.257408	Pitx2_Otx2	ENSMUST00000031914.4|AI836003|ENSMUSG00000029875.4|expressed sequence AI836003
mm10_v2_chr7_-_100583072_100583124	0.257167	Pitx2_Otx2	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr17_+_56005672_56005712	0.257127	Pitx2_Otx2	ENSMUST00000133998.1|Mpnd|ENSMUSG00000003199.10|MPN domain containing
mm10_v2_chr4_+_109280266_109280315	0.257046	Pitx2_Otx2	ENSMUST00000102729.3|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr1_+_171214013_171214045	0.25668	Pitx2_Otx2	ENSMUST00000111328.1|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3
mm10_v2_chr6_+_125192154_125192170	0.255473	Pitx2_Otx2	ENSMUST00000032485.5|Mrpl51|ENSMUSG00000030335.5|mitochondrial ribosomal protein L51
mm10_v2_chr18_+_32240300_32240342	0.255386	Pitx2_Otx2	ENSMUST00000025241.6|Ercc3|ENSMUSG00000024382.7|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm10_v2_chr2_+_26586607_26586689	0.255264	Pitx2_Otx2	ENSMUST00000174211.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000145575.2|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000173920.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7
mm10_v2_chr2_+_104886318_104886344	0.255	Pitx2_Otx2	ENSMUST00000111114.1|Ccdc73|ENSMUSG00000045106.6|coiled-coil domain containing 73
mm10_v2_chr3_-_142169196_142169261	0.254803	Pitx2_Otx2	ENSMUST00000098568.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chrX_-_94212685_94212709	0.254592	Pitx2_Otx2	ENSMUST00000050328.8|Eif2s3x|ENSMUSG00000035150.9|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm10_v2_chr4_+_146502027_146502027	0.254405	Pitx2_Otx2	ENSMUST00000105735.2|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr6_-_99435345_99435368	0.253633	Pitx2_Otx2	ENSMUST00000113322.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176850.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176632.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr11_-_33843405_33843461	0.252194	Pitx2_Otx2	ENSMUST00000101368.2|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1
mm10_v2_chr15_-_83595111_83595162	0.250239	Pitx2_Otx2	ENSMUST00000016901.3|Ttll12|ENSMUSG00000016757.4|tubulin tyrosine ligase-like family, member 12
mm10_v2_chr5_-_100798468_100798610	0.25006	Pitx2_Otx2	ENSMUST00000133845.1|Helq|ENSMUSG00000035266.10|helicase, POLQ-like 	ENSMUST00000044684.7|Helq|ENSMUSG00000035266.10|helicase, POLQ-like
mm10_v2_chr2_-_93822537_93822581	0.249449	Pitx2_Otx2	ENSMUST00000111248.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000184931.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000145838.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000028623.6|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2
mm10_v2_chr5_-_74065736_74065758	0.248394	Pitx2_Otx2	ENSMUST00000145016.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr11_+_96789149_96789206	0.248262	Pitx2_Otx2	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr16_-_93603803_93603815	0.245746	Pitx2_Otx2	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chr17_-_56609689_56609771	0.245392	Pitx2_Otx2	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr4_+_147868830_147868979	0.24533	Pitx2_Otx2	ENSMUST00000094481.1|Fv1|ENSMUSG00000070583.1|Friend virus susceptibility 1
mm10_v2_chr2_-_155582656_155582668	0.244216	Pitx2_Otx2	ENSMUST00000126322.1|Gss|ENSMUSG00000027610.11|glutathione synthetase
mm10_v2_chr7_-_141655319_141655395	0.243977	Pitx2_Otx2	ENSMUST00000062451.7|Muc6|ENSMUSG00000048191.9|mucin 6, gastric
mm10_v2_chr12_+_87874070_87874075	0.24102	Pitx2_Otx2	ENSMUST00000110147.2|Gm2016|ENSMUSG00000072905.5|predicted gene 2016
mm10_v2_chr14_-_70176787_70176824	0.240944	Pitx2_Otx2	ENSMUST00000153735.1|Pdlim2|ENSMUSG00000022090.4|PDZ and LIM domain 2
mm10_v2_chr1_-_160153571_160153585	0.240901	Pitx2_Otx2	ENSMUST00000039178.5|Tnn|ENSMUSG00000026725.11|tenascin N
mm10_v2_chr8_+_85071737_85071769	0.240755	Pitx2_Otx2	ENSMUST00000078665.6|Dhps|ENSMUSG00000060038.8|deoxyhypusine synthase
mm10_v2_chr2_+_76675265_76675287	0.240188	Pitx2_Otx2	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr18_+_3507945_3507964	0.238474	Pitx2_Otx2	ENSMUST00000025075.1|Bambi|ENSMUSG00000024232.1|BMP and activin membrane-bound inhibitor
mm10_v2_chr10_-_116549101_116549163	0.237676	Pitx2_Otx2	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr16_-_31081363_31081439	0.237322	Pitx2_Otx2	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr9_-_60838200_60838200	0.235842	Pitx2_Otx2	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr3_+_103809520_103809635	0.234936	Pitx2_Otx2	ENSMUST00000076599.1|Ap4b1|ENSMUSG00000032952.5|adaptor-related protein complex AP-4, beta 1 	ENSMUST00000106824.1|Ap4b1|ENSMUSG00000032952.5|adaptor-related protein complex AP-4, beta 1 	ENSMUST00000106823.1|Ap4b1|ENSMUSG00000032952.5|adaptor-related protein complex AP-4, beta 1 	ENSMUST00000047285.2|Ap4b1|ENSMUSG00000032952.5|adaptor-related protein complex AP-4, beta 1
mm10_v2_chr5_-_142608785_142608808	0.233749	Pitx2_Otx2	ENSMUST00000037048.7|Mmd2|ENSMUSG00000039533.7|monocyte to macrophage differentiation-associated 2
mm10_v2_chr3_-_115715031_115715062	0.233429	Pitx2_Otx2	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr17_-_28622419_28622473	0.233151	Pitx2_Otx2	ENSMUST00000114767.1|Srpk1|ENSMUSG00000004865.9|serine/arginine-rich protein specific kinase 1
mm10_v2_chr6_+_128887586_128887598	0.232242	Pitx2_Otx2	ENSMUST00000032519.5|Clec2i|ENSMUSG00000030365.5|C-type lectin domain family 2, member i 	ENSMUST00000159866.1|Clec2i|ENSMUSG00000030365.5|C-type lectin domain family 2, member i 	ENSMUST00000162666.1|Clec2i|ENSMUSG00000030365.5|C-type lectin domain family 2, member i
mm10_v2_chr13_-_21468474_21468508	0.231838	Pitx2_Otx2	ENSMUST00000068235.4|Nkapl|ENSMUSG00000059395.3|NFKB activating protein-like
mm10_v2_chr1_-_128417352_128417416	0.231312	Pitx2_Otx2	ENSMUST00000027602.8|Dars|ENSMUSG00000026356.9|aspartyl-tRNA synthetase 	ENSMUST00000064309.7|Dars|ENSMUSG00000026356.9|aspartyl-tRNA synthetase
mm10_v2_chr8_+_3470841_3470862	0.231183	Pitx2_Otx2	ENSMUST00000047265.6|1700019B03Rik|ENSMUSG00000040340.7|RIKEN cDNA 1700019B03 gene
mm10_v2_chr9_+_121366958_121367042	0.230378	Pitx2_Otx2	ENSMUST00000045903.6|Trak1|ENSMUSG00000032536.9|trafficking protein, kinesin binding 1
mm10_v2_chr17_+_94873986_94873986	0.229921	Pitx2_Otx2	ENSMUST00000108007.4|Gm20939|ENSMUSG00000095193.1|predicted gene, 20939
mm10_v2_chr17_-_57041647_57041662	0.229485	Pitx2_Otx2	ENSMUST00000169012.1|Slc25a41|ENSMUSG00000011486.8|solute carrier family 25, member 41 	ENSMUST00000058661.7|Slc25a41|ENSMUSG00000011486.8|solute carrier family 25, member 41
mm10_v2_chr14_-_54712139_54712174	0.229073	Pitx2_Otx2	ENSMUST00000064290.6|Cebpe|ENSMUSG00000052435.6|CCAAT/enhancer binding protein (C/EBP), epsilon
mm10_v2_chrX_-_111536325_111536342	0.22869	Pitx2_Otx2	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr10_+_58394361_58394380	0.228675	Pitx2_Otx2	ENSMUST00000020077.4|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr6_+_122952515_122952697	0.228493	Pitx2_Otx2	ENSMUST00000117173.1|Clec4a3|ENSMUSG00000043832.7|C-type lectin domain family 4, member a3 	ENSMUST00000088468.4|Clec4a3|ENSMUSG00000043832.7|C-type lectin domain family 4, member a3
mm10_v2_chr10_+_57650990_57651010	0.228444	Pitx2_Otx2	ENSMUST00000175852.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr10_+_81606883_81607025	0.228257	Pitx2_Otx2	ENSMUST00000119753.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000121138.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000099442.3|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920
mm10_v2_chr11_+_74770908_74770920	0.2281	Pitx2_Otx2	ENSMUST00000128504.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr11_+_98626344_98626360	0.228087	Pitx2_Otx2	ENSMUST00000107508.2|Gsdma3|ENSMUSG00000064224.4|gasdermin A3 	ENSMUST00000073295.2|Gsdma3|ENSMUSG00000064224.4|gasdermin A3
mm10_v2_chr8_+_83715239_83715288	0.228013	Pitx2_Otx2	ENSMUST00000172396.1|Ddx39|ENSMUSG00000005481.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm10_v2_chr5_+_3344194_3344312	0.227059	Pitx2_Otx2	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr17_+_23605505_23605515	0.227051	Pitx2_Otx2	ENSMUST00000117606.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000118369.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000138487.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10
mm10_v2_chr19_-_44069526_44069675	0.22528	Pitx2_Otx2	ENSMUST00000170801.1|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1
mm10_v2_chr5_+_112326352_112326492	0.225189	Pitx2_Otx2	ENSMUST00000031288.7|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11 	ENSMUST00000129528.1|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11
mm10_v2_chr12_-_17329348_17329369	0.224306	Pitx2_Otx2	ENSMUST00000153090.1|Atp6v1c2|ENSMUSG00000020566.12|ATPase, H+ transporting, lysosomal V1 subunit C2 	ENSMUST00000143131.1|Atp6v1c2|ENSMUSG00000020566.12|ATPase, H+ transporting, lysosomal V1 subunit C2
mm10_v2_chr17_-_57011271_57011326	0.222571	Pitx2_Otx2	ENSMUST00000002733.6|Gtf2f1|ENSMUSG00000002658.9|general transcription factor IIF, polypeptide 1
mm10_v2_chr2_-_79908428_79908438	0.222149	Pitx2_Otx2	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr15_-_99772596_99772608	0.222049	Pitx2_Otx2	ENSMUST00000023762.6|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr9_-_20815048_20815069	0.221115	Pitx2_Otx2	ENSMUST00000004201.7|Col5a3|ENSMUSG00000004098.7|collagen, type V, alpha 3
mm10_v2_chr7_-_134232125_134232146	0.220896	Pitx2_Otx2	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr9_-_14751987_14752122	0.220662	Pitx2_Otx2	ENSMUST00000061498.5|Fut4|ENSMUSG00000049307.5|fucosyltransferase 4
mm10_v2_chr13_+_41655697_41655697	0.220593	Pitx2_Otx2	ENSMUST00000067176.8|Gm5082|ENSMUSG00000054258.8|predicted gene 5082
mm10_v2_chr3_+_129881149_129881188	0.217145	Pitx2_Otx2	ENSMUST00000061165.7|Pla2g12a|ENSMUSG00000027999.9|phospholipase A2, group XIIA
mm10_v2_chr9_+_69397933_69397972	0.21688	Pitx2_Otx2	ENSMUST00000117610.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000145538.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000117246.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr6_+_108213086_108213123	0.216216	Pitx2_Otx2	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr16_+_27388869_27388980	0.216036	Pitx2_Otx2	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr4_+_107830958_107830985	0.215447	Pitx2_Otx2	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr1_+_132477361_132477412	0.215355	Pitx2_Otx2	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr2_+_155775333_155775392	0.215228	Pitx2_Otx2	ENSMUST00000029141.5|Mmp24|ENSMUSG00000027612.7|matrix metallopeptidase 24
mm10_v2_chr11_+_96789213_96789249	0.215159	Pitx2_Otx2	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr2_+_30364227_30364260	0.21496	Pitx2_Otx2	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr2_+_158502633_158502698	0.213753	Pitx2_Otx2	ENSMUST00000109484.1|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr5_+_143464493_143464536	0.212715	Pitx2_Otx2	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chr11_-_106613370_106613423	0.212233	Pitx2_Otx2	ENSMUST00000128933.1|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chrX_-_43167817_43167838	0.211352	Pitx2_Otx2	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr11_-_84069179_84069261	0.209847	Pitx2_Otx2	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr10_-_88826772_88826837	0.209337	Pitx2_Otx2	ENSMUST00000004470.7|Utp20|ENSMUSG00000004356.7|UTP20, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr7_+_111028951_111028972	0.209321	Pitx2_Otx2	ENSMUST00000005749.5|Ctr9|ENSMUSG00000005609.9|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr5_-_139484420_139484473	0.209292	Pitx2_Otx2	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chrX_-_7605374_7605517	0.208502	Pitx2_Otx2	ENSMUST00000033483.4|Ccdc22|ENSMUSG00000031143.4|coiled-coil domain containing 22
mm10_v2_chr3_-_105932664_105932679	0.207829	Pitx2_Otx2	ENSMUST00000098758.2|I830077J02Rik|ENSMUSG00000074342.2|RIKEN cDNA I830077J02 gene
mm10_v2_chr17_-_32284715_32284738	0.207341	Pitx2_Otx2	ENSMUST00000127893.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4
mm10_v2_chr2_+_29935413_29935499	0.205719	Pitx2_Otx2	ENSMUST00000019859.8|Gle1|ENSMUSG00000019715.8|GLE1 RNA export mediator (yeast)
mm10_v2_chr14_-_68533689_68533757	0.205284	Pitx2_Otx2	ENSMUST00000022640.7|Adam7|ENSMUSG00000022056.8|a disintegrin and metallopeptidase domain 7
mm10_v2_chr6_-_66559708_66559708	0.203988	Pitx2_Otx2	ENSMUST00000079584.1|Vmn1r32|ENSMUSG00000062905.1|vomeronasal 1 receptor 32
mm10_v2_chr2_+_32757234_32757319	0.203956	Pitx2_Otx2	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr2_-_106970391_106970407	0.202735	Pitx2_Otx2	ENSMUST00000093883.3|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr13_+_14613242_14613272	0.202579	Pitx2_Otx2	ENSMUST00000170836.2|Psma2|ENSMUSG00000015671.10|proteasome (prosome, macropain) subunit, alpha type 2
mm10_v2_chr5_-_62766153_62766246	0.202265	Pitx2_Otx2	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr4_+_32623985_32624084	0.20225	Pitx2_Otx2	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr3_-_59101810_59101826	0.200646	Pitx2_Otx2	ENSMUST00000085040.4|Gpr171|ENSMUSG00000050075.8|G protein-coupled receptor 171
mm10_v2_chr11_+_80383279_80383304	0.200602	Pitx2_Otx2	ENSMUST00000165565.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207 	ENSMUST00000017567.7|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr17_-_40880525_40880579	0.19961	Pitx2_Otx2	ENSMUST00000068258.2|9130008F23Rik|ENSMUSG00000054951.2|RIKEN cDNA 9130008F23 gene
mm10_v2_chr10_-_80657071_80657098	0.19936	Pitx2_Otx2	ENSMUST00000003434.7|Btbd2|ENSMUSG00000003344.8|BTB (POZ) domain containing 2
mm10_v2_chr11_-_101302206_101302291	0.198927	Pitx2_Otx2	ENSMUST00000140706.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000170502.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000172233.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000130916.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related
mm10_v2_chr3_-_88455735_88455788	0.198783	Pitx2_Otx2	ENSMUST00000029700.5|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr5_-_92310003_92310024	0.197643	Pitx2_Otx2	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chr9_-_50739365_50739517	0.196886	Pitx2_Otx2	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr1_+_171213969_171214007	0.19613	Pitx2_Otx2	ENSMUST00000005820.4|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000075469.5|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000155126.1|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3
mm10_v2_chr17_+_35439155_35439195	0.19558	Pitx2_Otx2	ENSMUST00000071951.6|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000078205.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000116598.3|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000076256.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7
mm10_v2_chr6_-_134792596_134792682	0.195511	Pitx2_Otx2	ENSMUST00000100857.3|Dusp16|ENSMUSG00000030203.11|dual specificity phosphatase 16
mm10_v2_chr12_+_76072016_76072079	0.195272	Pitx2_Otx2	ENSMUST00000131480.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr10_+_81321103_81321247	0.195221	Pitx2_Otx2	ENSMUST00000050867.6|Cactin|ENSMUSG00000034889.7|cactin, spliceosome C complex subunit
mm10_v2_chr5_+_114786045_114786045	0.195046	Pitx2_Otx2	ENSMUST00000137519.1|Ankrd13a|ENSMUSG00000041870.10|ankyrin repeat domain 13a
mm10_v2_chr10_+_57650977_57650985	0.194471	Pitx2_Otx2	ENSMUST00000066028.6|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr17_+_33432890_33432911	0.194345	Pitx2_Otx2	ENSMUST00000174088.2|Actl9|ENSMUSG00000092519.2|actin-like 9
mm10_v2_chr3_-_8923796_8923918	0.194219	Pitx2_Otx2	ENSMUST00000042148.5|Mrps28|ENSMUSG00000040269.5|mitochondrial ribosomal protein S28
mm10_v2_chr1_-_119648903_119649000	0.193163	Pitx2_Otx2	ENSMUST00000163147.1|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000052404.6|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000027632.7|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5
mm10_v2_chr1_+_178256103_178256103	0.19289	Pitx2_Otx2	ENSMUST00000069568.3|Gm9982|ENSMUSG00000055831.3|predicted gene 9982
mm10_v2_chr15_-_50890041_50890064	0.191633	Pitx2_Otx2	ENSMUST00000077935.5|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr5_+_24393640_24393676	0.191632	Pitx2_Otx2	ENSMUST00000138168.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8 	ENSMUST00000115077.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm10_v2_chr11_-_107189325_107189381	0.191507	Pitx2_Otx2	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr5_-_62765618_62765656	0.188631	Pitx2_Otx2	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr15_-_83464570_83464591	0.186991	Pitx2_Otx2	ENSMUST00000056177.6|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chrX_+_109095359_109095391	0.186904	Pitx2_Otx2	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chr6_+_86438714_86438727	0.186188	Pitx2_Otx2	ENSMUST00000113698.1|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr5_+_149184678_149184740	0.185353	Pitx2_Otx2	ENSMUST00000139474.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1 	ENSMUST00000117878.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1
mm10_v2_chr8_+_71611024_71611157	0.184415	Pitx2_Otx2	ENSMUST00000047903.8|Colgalt1|ENSMUSG00000034807.8|collagen beta(1-O)galactosyltransferase 1
mm10_v2_chr5_+_138116903_138117041	0.183145	Pitx2_Otx2	ENSMUST00000062350.8|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110961.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000080732.3|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110960.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000142185.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000136425.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110959.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21
mm10_v2_chr10_-_63927434_63927434	0.182724	Pitx2_Otx2	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chr10_+_128254131_128254176	0.181308	Pitx2_Otx2	ENSMUST00000060782.3|Apon|ENSMUSG00000051716.5|apolipoprotein N
mm10_v2_chr2_-_25983056_25983154	0.180615	Pitx2_Otx2	ENSMUST00000127823.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000134882.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr10_+_81384418_81384452	0.180141	Pitx2_Otx2	ENSMUST00000072751.6|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr8_+_109565892_109566031	0.180058	Pitx2_Otx2	ENSMUST00000034159.1|Txnl4b|ENSMUSG00000031723.2|thioredoxin-like 4B
mm10_v2_chr10_-_53379816_53379858	0.179441	Pitx2_Otx2	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr4_+_9844349_9844372	0.179266	Pitx2_Otx2	ENSMUST00000057613.2|Gdf6|ENSMUSG00000051279.2|growth differentiation factor 6
mm10_v2_chr1_-_74305607_74305622	0.179077	Pitx2_Otx2	ENSMUST00000130763.1|Tmbim1|ENSMUSG00000006301.11|transmembrane BAX inhibitor motif containing 1
mm10_v2_chr10_+_58394381_58394395	0.178567	Pitx2_Otx2	ENSMUST00000105468.1|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr2_-_119208767_119208802	0.176859	Pitx2_Otx2	ENSMUST00000038439.3|Dnajc17|ENSMUSG00000034278.3|DnaJ (Hsp40) homolog, subfamily C, member 17
mm10_v2_chr11_-_84828953_84828966	0.175896	Pitx2_Otx2	ENSMUST00000047560.7|Dhrs11|ENSMUSG00000034449.7|dehydrogenase/reductase (SDR family) member 11
mm10_v2_chr9_+_120092106_120092133	0.175717	Pitx2_Otx2	ENSMUST00000048777.2|Ccr8|ENSMUSG00000042262.4|chemokine (C-C motif) receptor 8
mm10_v2_chr17_-_33713372_33713390	0.175341	Pitx2_Otx2	ENSMUST00000173392.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr2_-_167661496_167661591	0.175258	Pitx2_Otx2	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr7_+_127904079_127904125	0.173359	Pitx2_Otx2	ENSMUST00000071056.7|Bckdk|ENSMUSG00000030802.8|branched chain ketoacid dehydrogenase kinase
mm10_v2_chr7_-_16387791_16387840	0.173104	Pitx2_Otx2	ENSMUST00000094815.3|Sae1|ENSMUSG00000052833.8|SUMO1 activating enzyme subunit 1
mm10_v2_chr5_-_88676135_88676186	0.172603	Pitx2_Otx2	ENSMUST00000078945.5|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr11_+_70017085_70017146	0.172526	Pitx2_Otx2	ENSMUST00000108589.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr8_-_11635745_11635765	0.172085	Pitx2_Otx2	ENSMUST00000033905.5|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10 	ENSMUST00000169782.1|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10
mm10_v2_chr2_-_145935014_145935014	0.172	Pitx2_Otx2	ENSMUST00000001818.4|Crnkl1|ENSMUSG00000001767.5|Crn, crooked neck-like 1 (Drosophila)
mm10_v2_chr13_-_52929640_52929681	0.171928	Pitx2_Otx2	ENSMUST00000120535.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000119311.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000021913.9|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000110031.3|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr7_-_64374071_64374109	0.170579	Pitx2_Otx2	ENSMUST00000163289.1|Fan1|ENSMUSG00000033458.11|FANCD2/FANCI-associated nuclease 1
mm10_v2_chr11_-_69579320_69579352	0.170392	Pitx2_Otx2	ENSMUST00000048139.5|Wrap53|ENSMUSG00000041346.5|WD repeat containing, antisense to Trp53
mm10_v2_chr15_-_81871883_81871916	0.170187	Pitx2_Otx2	ENSMUST00000023117.8|Phf5a|ENSMUSG00000061360.7|PHD finger protein 5A
mm10_v2_chr2_+_113441064_113441079	0.170105	Pitx2_Otx2	ENSMUST00000081349.6|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr14_+_14820765_14820815	0.169896	Pitx2_Otx2	ENSMUST00000112631.2|Nek10|ENSMUSG00000042567.13|NIMA (never in mitosis gene a)- related kinase 10 	ENSMUST00000178538.1|Nek10|ENSMUSG00000042567.13|NIMA (never in mitosis gene a)- related kinase 10 	ENSMUST00000112630.2|Nek10|ENSMUSG00000042567.13|NIMA (never in mitosis gene a)- related kinase 10
mm10_v2_chr9_+_21337828_21337859	0.169366	Pitx2_Otx2	ENSMUST00000034697.7|Slc44a2|ENSMUSG00000057193.7|solute carrier family 44, member 2
mm10_v2_chr6_-_86684510_86684529	0.169317	Pitx2_Otx2	ENSMUST00000001186.4|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5) 	ENSMUST00000113683.1|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5)
mm10_v2_chr2_-_157571270_157571289	0.169075	Pitx2_Otx2	ENSMUST00000173378.1|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr12_-_85097080_85097091	0.169005	Pitx2_Otx2	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr1_-_95667555_95667597	0.168693	Pitx2_Otx2	ENSMUST00000043336.4|St8sia4|ENSMUSG00000040710.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm10_v2_chr4_+_49632046_49632110	0.168093	Pitx2_Otx2	ENSMUST00000156314.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000167496.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000029989.4|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000146547.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr2_-_166581969_166582071	0.167998	Pitx2_Otx2	ENSMUST00000109246.1|Prex1|ENSMUSG00000039621.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
mm10_v2_chr4_-_43483696_43483734	0.16709	Pitx2_Otx2	ENSMUST00000030180.6|Sit1|ENSMUSG00000028460.6|suppression inducing transmembrane adaptor 1
mm10_v2_chr15_+_103018936_103018973	0.166584	Pitx2_Otx2	ENSMUST00000165375.1|Hoxc4|ENSMUSG00000075394.3|homeobox C4
mm10_v2_chr6_+_86438360_86438405	0.166414	Pitx2_Otx2	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr7_-_133122615_133122762	0.166268	Pitx2_Otx2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr2_+_127208358_127208444	0.164794	Pitx2_Otx2	ENSMUST00000103220.3|Snrnp200|ENSMUSG00000003660.10|small nuclear ribonucleoprotein 200 (U5)
mm10_v2_chr19_-_43752924_43753001	0.163818	Pitx2_Otx2	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr11_-_100472725_100472759	0.16374	Pitx2_Otx2	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr2_+_62046580_62046593	0.163509	Pitx2_Otx2	ENSMUST00000054484.8|Slc4a10|ENSMUSG00000026904.11|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm10_v2_chr11_+_87405049_87405113	0.163071	Pitx2_Otx2	ENSMUST00000060835.5|Tex14|ENSMUSG00000010342.10|testis expressed gene 14
mm10_v2_chr2_+_127080252_127080277	0.163019	Pitx2_Otx2	ENSMUST00000142737.1|Blvra|ENSMUSG00000001999.9|biliverdin reductase A
mm10_v2_chr18_-_34651703_34651741	0.162592	Pitx2_Otx2	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr13_+_108046411_108046424	0.162331	Pitx2_Otx2	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr6_+_83349446_83349496	0.161268	Pitx2_Otx2	ENSMUST00000136501.1|Bola3|ENSMUSG00000045160.8|bolA-like 3 (E. coli)
mm10_v2_chr5_-_92253159_92253159	0.16097	Pitx2_Otx2	ENSMUST00000031359.8|Ppef2|ENSMUSG00000029410.8|protein phosphatase, EF hand calcium-binding domain 2
mm10_v2_chr6_-_86733268_86733394	0.160703	Pitx2_Otx2	ENSMUST00000001185.7|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chr4_-_116994374_116994413	0.159781	Pitx2_Otx2	ENSMUST00000030446.8|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr9_-_67043832_67043843	0.159712	Pitx2_Otx2	ENSMUST00000113686.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr11_+_3330781_3330812	0.159322	Pitx2_Otx2	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr12_-_85280306_85280347	0.158531	Pitx2_Otx2	ENSMUST00000117138.2|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr10_+_40349265_40349387	0.158268	Pitx2_Otx2	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr16_-_30587537_30587597	0.158224	Pitx2_Otx2	ENSMUST00000117363.2|Lsg1|ENSMUSG00000022538.13|large subunit GTPase 1 homolog (S. cerevisiae)
mm10_v2_chrX_-_140956675_140956728	0.157648	Pitx2_Otx2	ENSMUST00000033805.8|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENSMUST00000112978.1|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
mm10_v2_chr10_+_75948292_75948333	0.156615	Pitx2_Otx2	ENSMUST00000000926.2|Vpreb3|ENSMUSG00000000903.3|pre-B lymphocyte gene 3
mm10_v2_chr2_+_125505089_125505089	0.156577	Pitx2_Otx2	ENSMUST00000066157.1|Gm9913|ENSMUSG00000053615.1|predicted gene 9913
mm10_v2_chr7_-_67645195_67645273	0.155758	Pitx2_Otx2	ENSMUST00000032775.5|Lrrc28|ENSMUSG00000030556.6|leucine rich repeat containing 28 	ENSMUST00000053950.2|Lrrc28|ENSMUSG00000030556.6|leucine rich repeat containing 28
mm10_v2_chr5_+_64230285_64230312	0.155686	Pitx2_Otx2	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr6_-_97459279_97459303	0.155541	Pitx2_Otx2	ENSMUST00000113359.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr11_+_96789118_96789146	0.155026	Pitx2_Otx2	ENSMUST00000018810.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr6_-_118757974_118757974	0.154825	Pitx2_Otx2	ENSMUST00000112825.2|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm10_v2_chr7_+_141131268_141131333	0.154452	Pitx2_Otx2	ENSMUST00000026568.8|Ptdss2|ENSMUSG00000025495.8|phosphatidylserine synthase 2
mm10_v2_chr7_-_12998172_12998210	0.153913	Pitx2_Otx2	ENSMUST00000120903.1|Slc27a5|ENSMUSG00000030382.8|solute carrier family 27 (fatty acid transporter), member 5
mm10_v2_chr12_+_118846329_118846329	0.153728	Pitx2_Otx2	ENSMUST00000063918.2|Sp8|ENSMUSG00000048562.6|trans-acting transcription factor 8
mm10_v2_chr7_-_29180699_29180710	0.153517	Pitx2_Otx2	ENSMUST00000059642.10|Psmd8|ENSMUSG00000030591.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm10_v2_chr8_+_83566671_83566815	0.152899	Pitx2_Otx2	ENSMUST00000036996.5|Ndufb7|ENSMUSG00000033938.5|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7
mm10_v2_chr11_+_115403734_115403777	0.152815	Pitx2_Otx2	ENSMUST00000153983.1|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1 	ENSMUST00000106539.3|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1 	ENSMUST00000103036.4|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1
mm10_v2_chr6_-_43309554_43309554	0.152364	Pitx2_Otx2	ENSMUST00000031749.9|Nobox|ENSMUSG00000029736.9|NOBOX oogenesis homeobox
mm10_v2_chr11_+_58307055_58307104	0.152163	Pitx2_Otx2	ENSMUST00000153510.2|Zfp692|ENSMUSG00000037243.11|zinc finger protein 692
mm10_v2_chr11_-_69681903_69682084	0.151277	Pitx2_Otx2	ENSMUST00000066760.1|Senp3|ENSMUSG00000005204.6|SUMO/sentrin specific peptidase 3
mm10_v2_chr5_+_105558858_105558891	0.15096	Pitx2_Otx2	ENSMUST00000153754.1|Lrrc8c|ENSMUSG00000054720.6|leucine rich repeat containing 8 family, member C
mm10_v2_chr3_-_121171678_121171717	0.150603	Pitx2_Otx2	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr14_-_77036081_77036081	0.149473	Pitx2_Otx2	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr16_+_93832121_93832308	0.149214	Pitx2_Otx2	ENSMUST00000044068.6|Morc3|ENSMUSG00000039456.6|microrchidia 3
mm10_v2_chr12_-_85280361_85280435	0.148813	Pitx2_Otx2	ENSMUST00000065913.7|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type 	ENSMUST00000008966.6|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr16_-_46010212_46010223	0.148797	Pitx2_Otx2	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr11_+_116966731_116966796	0.148525	Pitx2_Otx2	ENSMUST00000136584.1|Mgat5b|ENSMUSG00000043857.10|mannoside acetylglucosaminyltransferase 5, isoenzyme B
mm10_v2_chr15_-_50889691_50889714	0.147662	Pitx2_Otx2	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr8_+_126422478_126422514	0.147646	Pitx2_Otx2	ENSMUST00000059093.5|Coa6|ENSMUSG00000051671.6|cytochrome c oxidase assembly factor 6
mm10_v2_chr8_+_60993189_60993247	0.147244	Pitx2_Otx2	ENSMUST00000034065.7|Nek1|ENSMUSG00000031644.12|NIMA (never in mitosis gene a)-related expressed kinase 1 	ENSMUST00000120689.1|Nek1|ENSMUSG00000031644.12|NIMA (never in mitosis gene a)-related expressed kinase 1
mm10_v2_chr4_-_135987182_135987269	0.146928	Pitx2_Otx2	ENSMUST00000105851.2|Pithd1|ENSMUSG00000028669.9|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
mm10_v2_chr2_-_151744142_151744205	0.146218	Pitx2_Otx2	ENSMUST00000109869.1|Psmf1|ENSMUSG00000032869.9|proteasome (prosome, macropain) inhibitor subunit 1
mm10_v2_chr8_+_122376609_122376652	0.146071	Pitx2_Otx2	ENSMUST00000017622.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000093073.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000176699.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr7_+_43672003_43672040	0.145827	Pitx2_Otx2	ENSMUST00000038332.8|Ctu1|ENSMUSG00000038888.8|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm10_v2_chr9_+_13765970_13766043	0.144844	Pitx2_Otx2	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr2_-_155514796_155514860	0.144059	Pitx2_Otx2	ENSMUST00000029131.4|Ggt7|ENSMUSG00000027603.9|gamma-glutamyltransferase 7
mm10_v2_chr14_-_96519067_96519102	0.143511	Pitx2_Otx2	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chr8_-_121907678_121907694	0.141632	Pitx2_Otx2	ENSMUST00000045557.9|Slc7a5|ENSMUSG00000040010.10|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm10_v2_chr7_+_41284327_41284327	0.140521	Pitx2_Otx2	ENSMUST00000097044.2|Gm5592|ENSMUSG00000072259.2|predicted gene 5592
mm10_v2_chr3_+_108940076_108940107	0.14042	Pitx2_Otx2	ENSMUST00000059946.4|Henmt1|ENSMUSG00000045662.10|HEN1 methyltransferase homolog 1 (Arabidopsis)
mm10_v2_chr19_-_29648355_29648425	0.140073	Pitx2_Otx2	ENSMUST00000159692.1|Ermp1|ENSMUSG00000046324.6|endoplasmic reticulum metallopeptidase 1
mm10_v2_chr2_-_180954620_180954670	0.139824	Pitx2_Otx2	ENSMUST00000139929.1|Nkain4|ENSMUSG00000027574.9|Na+/K+ transporting ATPase interacting 4
mm10_v2_chr9_-_45955170_45955186	0.139016	Pitx2_Otx2	ENSMUST00000162072.1|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr10_-_81167896_81167923	0.138953	Pitx2_Otx2	ENSMUST00000005064.7|Pias4|ENSMUSG00000004934.7|protein inhibitor of activated STAT 4
mm10_v2_chr4_-_117682233_117682279	0.138681	Pitx2_Otx2	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr15_-_55072139_55072161	0.135748	Pitx2_Otx2	ENSMUST00000041733.7|Taf2|ENSMUSG00000037343.7|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr4_-_141398204_141398241	0.135529	Pitx2_Otx2	ENSMUST00000105790.1|Clcnka|ENSMUSG00000033770.7|chloride channel Ka
mm10_v2_chr2_+_157087042_157087055	0.135312	Pitx2_Otx2	ENSMUST00000166140.1|Tldc2|ENSMUSG00000074628.3|TBC/LysM associated domain containing 2
mm10_v2_chr8_-_54724317_54724388	0.135115	Pitx2_Otx2	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr7_+_3617357_3617389	0.134768	Pitx2_Otx2	ENSMUST00000076657.4|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 	ENSMUST00000108644.1|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm10_v2_chr8_-_111522073_111522112	0.134405	Pitx2_Otx2	ENSMUST00000034437.6|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59 	ENSMUST00000038193.7|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59
mm10_v2_chr14_+_69190638_69190691	0.133375	Pitx2_Otx2	ENSMUST00000022646.8|Nkx3-1|ENSMUSG00000022061.8|NK-3 transcription factor, locus 1 (Drosophila)
mm10_v2_chr6_-_83527452_83527500	0.132818	Pitx2_Otx2	ENSMUST00000141904.1|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr10_-_69212996_69213098	0.132593	Pitx2_Otx2	ENSMUST00000170048.1|A930033H14Rik|ENSMUSG00000090622.1|RIKEN cDNA A930033H14 gene
mm10_v2_chr4_-_117765550_117765648	0.132561	Pitx2_Otx2	ENSMUST00000062747.5|Klf17|ENSMUSG00000048626.5|Kruppel-like factor 17
mm10_v2_chr15_+_99295087_99295279	0.132231	Pitx2_Otx2	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr19_+_40831248_40831292	0.130747	Pitx2_Otx2	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr18_+_73863672_73863713	0.130106	Pitx2_Otx2	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr7_-_46667303_46667343	0.130013	Pitx2_Otx2	ENSMUST00000168335.1|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr11_+_96316684_96316684	0.129614	Pitx2_Otx2	ENSMUST00000049241.7|Hoxb4|ENSMUSG00000038692.7|homeobox B4
mm10_v2_chr1_+_131688670_131688738	0.129383	Pitx2_Otx2	ENSMUST00000064679.2|5430435G22Rik|ENSMUSG00000052688.6|RIKEN cDNA 5430435G22 gene 	ENSMUST00000064664.3|5430435G22Rik|ENSMUSG00000052688.6|RIKEN cDNA 5430435G22 gene 	ENSMUST00000136247.1|5430435G22Rik|ENSMUSG00000052688.6|RIKEN cDNA 5430435G22 gene
mm10_v2_chr15_+_99702278_99702312	0.128916	Pitx2_Otx2	ENSMUST00000023759.4|Smarcd1|ENSMUSG00000023018.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm10_v2_chr12_+_4843303_4843419	0.127172	Pitx2_Otx2	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr10_-_78298162_78298198	0.126791	Pitx2_Otx2	ENSMUST00000105389.1|Agpat3|ENSMUSG00000001211.8|1-acylglycerol-3-phosphate O-acyltransferase 3
mm10_v2_chr11_-_83286722_83286729	0.124869	Pitx2_Otx2	ENSMUST00000163961.2|Slfn14|ENSMUSG00000082101.3|schlafen family member 14
mm10_v2_chr10_+_79704499_79704570	0.123066	Pitx2_Otx2	ENSMUST00000067036.5|Bsg|ENSMUSG00000023175.9|basigin 	ENSMUST00000178383.1|Bsg|ENSMUSG00000023175.9|basigin
mm10_v2_chr11_+_4160348_4160404	0.122635	Pitx2_Otx2	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chrX_+_74424632_74424671	0.122534	Pitx2_Otx2	ENSMUST00000114129.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000132749.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr15_-_93336800_93336852	0.12236	Pitx2_Otx2	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr11_+_101253707_101253757	0.121261	Pitx2_Otx2	ENSMUST00000007533.8|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000042477.6|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000100414.5|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000107280.4|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000121331.1|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast)
mm10_v2_chr11_-_103621140_103621140	0.12091	Pitx2_Otx2	ENSMUST00000059279.6|Gm884|ENSMUSG00000034239.8|predicted gene 884
mm10_v2_chr13_-_113100971_113100988	0.120636	Pitx2_Otx2	ENSMUST00000023897.5|Gzma|ENSMUSG00000023132.7|granzyme A
mm10_v2_chr16_+_57353093_57353117	0.120117	Pitx2_Otx2	ENSMUST00000159816.1|Filip1l|ENSMUSG00000043336.8|filamin A interacting protein 1-like
mm10_v2_chr15_+_43477213_43477270	0.120044	Pitx2_Otx2	ENSMUST00000022962.6|Emc2|ENSMUSG00000022337.6|ER membrane protein complex subunit 2
mm10_v2_chr1_+_66364623_66364663	0.119394	Pitx2_Otx2	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr6_-_83527773_83527810	0.11926	Pitx2_Otx2	ENSMUST00000152029.1|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr7_+_43018798_43018798	0.119081	Pitx2_Otx2	ENSMUST00000173815.1|Gm9268|ENSMUSG00000091528.2|predicted gene 9268 	ENSMUST00000166914.1|Gm9268|ENSMUSG00000091528.2|predicted gene 9268
mm10_v2_chr3_-_88455692_88455707	0.118423	Pitx2_Otx2	ENSMUST00000107531.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr11_+_100622870_100622881	0.11647	Pitx2_Otx2	ENSMUST00000017981.3|Nkiras2|ENSMUSG00000017837.6|NFKB inhibitor interacting Ras-like protein 2
mm10_v2_chrX_-_61185558_61185558	0.116025	Pitx2_Otx2	ENSMUST00000166381.1|Cdr1|ENSMUSG00000090546.1|cerebellar degeneration related antigen 1
mm10_v2_chr5_+_31094984_31094984	0.115879	Pitx2_Otx2	ENSMUST00000066505.1|Gm9924|ENSMUSG00000053839.1|predicted gene 9924
mm10_v2_chr17_-_65642188_65642206	0.115743	Pitx2_Otx2	ENSMUST00000050236.5|Txndc2|ENSMUSG00000050612.5|thioredoxin domain containing 2 (spermatozoa)
mm10_v2_chr17_+_24426676_24426701	0.114921	Pitx2_Otx2	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr3_+_37063527_37063639	0.11478	Pitx2_Otx2	ENSMUST00000144629.1|Adad1|ENSMUSG00000027719.9|adenosine deaminase domain containing 1 (testis specific) 	ENSMUST00000029274.7|Adad1|ENSMUSG00000027719.9|adenosine deaminase domain containing 1 (testis specific)
mm10_v2_chr15_+_4375462_4375511	0.114721	Pitx2_Otx2	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr6_-_128300738_128300823	0.114709	Pitx2_Otx2	ENSMUST00000143004.1|Tead4|ENSMUSG00000030353.9|TEA domain family member 4 	ENSMUST00000006311.6|Tead4|ENSMUSG00000030353.9|TEA domain family member 4 	ENSMUST00000112157.2|Tead4|ENSMUSG00000030353.9|TEA domain family member 4 	ENSMUST00000133118.1|Tead4|ENSMUSG00000030353.9|TEA domain family member 4
mm10_v2_chr7_-_34196608_34196675	0.113788	Pitx2_Otx2	ENSMUST00000148381.1|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like 	ENSMUST00000002710.3|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like
mm10_v2_chr9_+_19641224_19641224	0.113056	Pitx2_Otx2	ENSMUST00000079042.6|Zfp317|ENSMUSG00000057551.8|zinc finger protein 317
mm10_v2_chr9_+_77941274_77941303	0.112774	Pitx2_Otx2	ENSMUST00000134072.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr5_+_25516061_25516102	0.111956	Pitx2_Otx2	ENSMUST00000045016.7|Cct8l1|ENSMUSG00000038044.7|chaperonin containing TCP1, subunit 8 (theta)-like 1
mm10_v2_chr7_-_127020321_127020336	0.110022	Pitx2_Otx2	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr14_+_79397772_79397772	0.109559	Pitx2_Otx2	ENSMUST00000022600.2|Mtrf1|ENSMUSG00000022022.2|mitochondrial translational release factor 1
mm10_v2_chrX_+_134187492_134187503	0.109498	Pitx2_Otx2	ENSMUST00000064476.4|Arl13a|ENSMUSG00000052549.4|ADP-ribosylation factor-like 13A
mm10_v2_chr4_-_116994354_116994372	0.109447	Pitx2_Otx2	ENSMUST00000130273.1|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr19_-_3282958_3283048	0.108571	Pitx2_Otx2	ENSMUST00000119292.1|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2 	ENSMUST00000025751.3|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2
mm10_v2_chr18_-_24530203_24530245	0.107507	Pitx2_Otx2	ENSMUST00000046206.3|Rprd1a|ENSMUSG00000040446.3|regulation of nuclear pre-mRNA domain containing 1A
mm10_v2_chr5_-_137533170_137533204	0.107485	Pitx2_Otx2	ENSMUST00000168746.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2 	ENSMUST00000170293.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr11_+_106751255_106751280	0.107271	Pitx2_Otx2	ENSMUST00000183111.1|Milr1|ENSMUSG00000040528.9|mast cell immunoglobulin like receptor 1 	ENSMUST00000106794.2|Milr1|ENSMUSG00000040528.9|mast cell immunoglobulin like receptor 1
mm10_v2_chr15_-_98918131_98918231	0.10676	Pitx2_Otx2	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr9_-_45955226_45955250	0.106693	Pitx2_Otx2	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr2_+_58470116_58470116	0.106254	Pitx2_Otx2	ENSMUST00000167423.1|Gm17409|ENSMUSG00000091922.1|predicted gene, 17409
mm10_v2_chr5_-_134176720_134176784	0.105797	Pitx2_Otx2	ENSMUST00000076228.2|Wbscr16|ENSMUSG00000061979.2|Williams-Beuren syndrome chromosome region 16 homolog (human)
mm10_v2_chr7_+_41032719_41032719	0.105708	Pitx2_Otx2	ENSMUST00000164422.1|Gm4884|ENSMUSG00000048312.7|predicted gene 4884
mm10_v2_chr19_+_34008247_34008269	0.105342	Pitx2_Otx2	ENSMUST00000054260.6|Lipk|ENSMUSG00000024771.6|lipase, family member K
mm10_v2_chr2_+_151542483_151542646	0.105047	Pitx2_Otx2	ENSMUST00000044011.5|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr11_+_54314896_54314957	0.103925	Pitx2_Otx2	ENSMUST00000072178.4|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6 	ENSMUST00000101211.2|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6 	ENSMUST00000101213.2|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6
mm10_v2_chr2_-_120731503_120731534	0.103904	Pitx2_Otx2	ENSMUST00000110701.1|Cdan1|ENSMUSG00000027284.10|congenital dyserythropoietic anemia, type I (human) 	ENSMUST00000110700.1|Cdan1|ENSMUSG00000027284.10|congenital dyserythropoietic anemia, type I (human)
mm10_v2_chr13_+_77708683_77708740	0.1038	Pitx2_Otx2	ENSMUST00000163257.1|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000091459.4|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000099358.3|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A
mm10_v2_chr4_+_148558422_148558469	0.103783	Pitx2_Otx2	ENSMUST00000017408.7|Exosc10|ENSMUSG00000017264.10|exosome component 10 	ENSMUST00000076022.6|Exosc10|ENSMUSG00000017264.10|exosome component 10
mm10_v2_chr11_+_6292120_6292203	0.10326	Pitx2_Otx2	ENSMUST00000135124.1|Ogdh|ENSMUSG00000020456.11|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
mm10_v2_chr7_+_45513701_45513710	0.10323	Pitx2_Otx2	ENSMUST00000107762.1|Tulp2|ENSMUSG00000023467.10|tubby-like protein 2
mm10_v2_chr1_+_60908993_60909033	0.10298	Pitx2_Otx2	ENSMUST00000027164.2|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr3_-_36053512_36053547	0.102883	Pitx2_Otx2	ENSMUST00000166644.2|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B 	ENSMUST00000062056.8|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B
mm10_v2_chr10_+_51480632_51480640	0.102334	Pitx2_Otx2	ENSMUST00000102894.3|Gp49a|ENSMUSG00000089672.4|glycoprotein 49 A 	ENSMUST00000105482.1|Lilrb4|ENSMUSG00000062593.9|leukocyte immunoglobulin-like receptor, subfamily B, member 4 	ENSMUST00000105481.1|Lilrb4|ENSMUSG00000062593.9|leukocyte immunoglobulin-like receptor, subfamily B, member 4
mm10_v2_chr13_-_74208661_74208719	0.101835	Pitx2_Otx2	ENSMUST00000035934.5|Exoc3|ENSMUSG00000034152.5|exocyst complex component 3
mm10_v2_chr13_+_97137937_97138040	0.101536	Pitx2_Otx2	ENSMUST00000042084.6|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000160139.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161639.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161913.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161825.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000161929.1|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2 	ENSMUST00000022170.7|Gfm2|ENSMUSG00000021666.10|G elongation factor, mitochondrial 2
mm10_v2_chr11_-_32200222_32200286	0.101247	Pitx2_Otx2	ENSMUST00000145401.1|Il9r|ENSMUSG00000020279.4|interleukin 9 receptor 	ENSMUST00000142396.1|Il9r|ENSMUSG00000020279.4|interleukin 9 receptor 	ENSMUST00000128311.1|Il9r|ENSMUSG00000020279.4|interleukin 9 receptor
mm10_v2_chr5_+_38260372_38260386	0.100876	Pitx2_Otx2	ENSMUST00000119047.1|Tmem128|ENSMUSG00000067365.4|transmembrane protein 128
mm10_v2_chr7_+_126976338_126976400	0.100401	Pitx2_Otx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr8_+_58911755_58911755	0.100263	Pitx2_Otx2	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr3_-_108889706_108889808	0.0994359	Pitx2_Otx2	ENSMUST00000180063.1|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr15_+_36179530_36179701	0.0992303	Pitx2_Otx2	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr5_-_114773488_114773517	0.0989523	Pitx2_Otx2	ENSMUST00000178440.1|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000043283.7|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000112185.2|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2
mm10_v2_chrX_+_9885622_9885622	0.0986408	Pitx2_Otx2	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr1_-_36709904_36710008	0.098225	Pitx2_Otx2	ENSMUST00000043951.3|Actr1b|ENSMUSG00000037351.3|ARP1 actin-related protein 1B, centractin beta
mm10_v2_chr1_+_169928648_169928648	0.0980441	Pitx2_Otx2	ENSMUST00000094348.3|1700084C01Rik|ENSMUSG00000070532.4|RIKEN cDNA 1700084C01 gene
mm10_v2_chr5_+_92376954_92376975	0.097937	Pitx2_Otx2	ENSMUST00000120781.1|Art3|ENSMUSG00000034842.10|ADP-ribosyltransferase 3
mm10_v2_chr10_+_19621992_19622004	0.0973835	Pitx2_Otx2	ENSMUST00000036564.7|Il22ra2|ENSMUSG00000039760.8|interleukin 22 receptor, alpha 2
mm10_v2_chr2_-_30048827_30048891	0.0972061	Pitx2_Otx2	ENSMUST00000113711.2|Wdr34|ENSMUSG00000039715.8|WD repeat domain 34
mm10_v2_chr4_-_141606011_141606058	0.0966659	Pitx2_Otx2	ENSMUST00000123150.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000133874.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000136831.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000130181.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000105785.2|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr12_-_87775755_87775755	0.0964545	Pitx2_Otx2	ENSMUST00000164517.2|Gm21319|ENSMUSG00000095724.1|predicted gene, 21319
mm10_v2_chr2_-_164071124_164071169	0.0958632	Pitx2_Otx2	ENSMUST00000109384.3|Tomm34|ENSMUSG00000018322.4|translocase of outer mitochondrial membrane 34
mm10_v2_chr7_+_19368498_19368553	0.0955039	Pitx2_Otx2	ENSMUST00000132655.1|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr12_-_52028063_52028063	0.0953488	Pitx2_Otx2	ENSMUST00000040161.4|Gpr33|ENSMUSG00000035148.4|G protein-coupled receptor 33
mm10_v2_chr11_-_116306652_116306691	0.0941662	Pitx2_Otx2	ENSMUST00000126731.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr9_+_90054529_90054545	0.0937772	Pitx2_Otx2	ENSMUST00000143172.1|Ctsh|ENSMUSG00000032359.8|cathepsin H
mm10_v2_chr11_-_115627948_115628122	0.093161	Pitx2_Otx2	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr3_-_10440054_10440127	0.0922902	Pitx2_Otx2	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr2_+_68117713_68117713	0.092252	Pitx2_Otx2	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr10_-_86541334_86541334	0.0922207	Pitx2_Otx2	ENSMUST00000165173.1|Gm6729|ENSMUSG00000090816.1|predicted gene 6729
mm10_v2_chr11_-_98193260_98193298	0.0913507	Pitx2_Otx2	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr17_+_34238896_34238911	0.09065	Pitx2_Otx2	ENSMUST00000095342.3|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr7_+_45513718_45513747	0.0899941	Pitx2_Otx2	ENSMUST00000024233.6|Tulp2|ENSMUSG00000023467.10|tubby-like protein 2
mm10_v2_chr5_-_150518164_150518164	0.089409	Pitx2_Otx2	ENSMUST00000118769.1|Zar1l|ENSMUSG00000056586.8|zygote arrest 1-like
mm10_v2_chr10_+_128908907_128908925	0.089383	Pitx2_Otx2	ENSMUST00000105229.1|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr7_-_126922887_126922926	0.0890922	Pitx2_Otx2	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr3_+_83055516_83055565	0.0889523	Pitx2_Otx2	ENSMUST00000150268.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 	ENSMUST00000122128.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm10_v2_chr11_+_102836296_102836458	0.0888186	Pitx2_Otx2	ENSMUST00000021302.8|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B 	ENSMUST00000107072.1|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B
mm10_v2_chr10_-_81266906_81266934	0.088412	Pitx2_Otx2	ENSMUST00000046114.4|Mrpl54|ENSMUSG00000034932.4|mitochondrial ribosomal protein L54
mm10_v2_chr1_-_54926311_54926402	0.0881367	Pitx2_Otx2	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr2_-_26910569_26910677	0.0874455	Pitx2_Otx2	ENSMUST00000015920.5|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000139815.1|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000102899.3|Med22|ENSMUSG00000015776.6|mediator complex subunit 22
mm10_v2_chr8_+_23139064_23139105	0.0872715	Pitx2_Otx2	ENSMUST00000033947.8|Ank1|ENSMUSG00000031543.12|ankyrin 1, erythroid
mm10_v2_chr10_-_79614012_79614055	0.0869903	Pitx2_Otx2	ENSMUST00000059699.7|C2cd4c|ENSMUSG00000045912.8|C2 calcium-dependent domain containing 4C 	ENSMUST00000178228.1|C2cd4c|ENSMUSG00000045912.8|C2 calcium-dependent domain containing 4C
mm10_v2_chr8_+_70527724_70527766	0.0863932	Pitx2_Otx2	ENSMUST00000119353.2|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8 	ENSMUST00000075491.7|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8
mm10_v2_chr9_+_107542209_107542258	0.0856247	Pitx2_Otx2	ENSMUST00000010201.3|Nprl2|ENSMUSG00000010057.3|nitrogen permease regulator-like 2
mm10_v2_chr10_+_79704478_79704496	0.0854478	Pitx2_Otx2	ENSMUST00000179781.1|Bsg|ENSMUSG00000023175.9|basigin
mm10_v2_chr2_+_6471991_6472004	0.084912	Pitx2_Otx2	ENSMUST00000147685.1|Gm13391|ENSMUSG00000086109.1|predicted gene 13391
mm10_v2_chr9_-_96478660_96478675	0.0848408	Pitx2_Otx2	ENSMUST00000057500.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr1_+_191025350_191025350	0.0837453	Pitx2_Otx2	ENSMUST00000181050.1|A230020J21Rik|ENSMUSG00000097845.1|RIKEN cDNA A230020J21 gene
mm10_v2_chr3_-_73708399_73708423	0.0837429	Pitx2_Otx2	ENSMUST00000029367.5|Bche|ENSMUSG00000027792.5|butyrylcholinesterase
mm10_v2_chr4_-_108780503_108780760	0.0828789	Pitx2_Otx2	ENSMUST00000106658.1|Zfyve9|ENSMUSG00000034557.8|zinc finger, FYVE domain containing 9
mm10_v2_chr1_+_92973113_92973127	0.0823993	Pitx2_Otx2	ENSMUST00000027489.7|Gpr35|ENSMUSG00000026271.9|G protein-coupled receptor 35
mm10_v2_chr4_-_35845204_35845204	0.0815023	Pitx2_Otx2	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr10_-_82285278_82285278	0.0814412	Pitx2_Otx2	ENSMUST00000171401.1|4932415D10Rik|ENSMUSG00000044581.7|RIKEN cDNA 4932415D10 gene
mm10_v2_chr8_+_84872105_84872112	0.0811864	Pitx2_Otx2	ENSMUST00000136026.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2 	ENSMUST00000170296.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2
mm10_v2_chr11_+_44617310_44617336	0.080531	Pitx2_Otx2	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr5_-_86172747_86172803	0.0795879	Pitx2_Otx2	ENSMUST00000039373.7|Uba6|ENSMUSG00000035898.7|ubiquitin-like modifier activating enzyme 6
mm10_v2_chr11_+_73240046_73240046	0.0788581	Pitx2_Otx2	ENSMUST00000108470.1|Trpv1|ENSMUSG00000005952.9|transient receptor potential cation channel, subfamily V, member 1
mm10_v2_chr1_-_181183739_181183739	0.0786864	Pitx2_Otx2	ENSMUST00000159290.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr2_-_102400257_102400396	0.0781404	Pitx2_Otx2	ENSMUST00000152929.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr17_+_34972687_34972705	0.0780832	Pitx2_Otx2	ENSMUST00000007248.3|Hspa1l|ENSMUSG00000007033.3|heat shock protein 1-like
mm10_v2_chr17_+_34238914_34238964	0.0779141	Pitx2_Otx2	ENSMUST00000167280.1|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr15_+_10981747_10981765	0.0769335	Pitx2_Otx2	ENSMUST00000070877.5|Amacr|ENSMUSG00000022244.6|alpha-methylacyl-CoA racemase
mm10_v2_chr1_-_153808163_153808168	0.0768213	Pitx2_Otx2	ENSMUST00000141249.1|Rgsl1|ENSMUSG00000042641.12|regulator of G-protein signaling like 1
mm10_v2_chr17_+_24896488_24896530	0.0766798	Pitx2_Otx2	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr14_-_63177793_63177889	0.0763389	Pitx2_Otx2	ENSMUST00000054963.9|Fdft1|ENSMUSG00000021273.9|farnesyl diphosphate farnesyl transferase 1
mm10_v2_chr1_+_171331414_171331426	0.0758759	Pitx2_Otx2	ENSMUST00000097467.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr8_-_104443001_104443047	0.0756541	Pitx2_Otx2	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr19_+_43752996_43753137	0.0755082	Pitx2_Otx2	ENSMUST00000026199.7|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000112047.3|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000153295.1|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli)
mm10_v2_chr10_+_94514825_94514922	0.0746826	Pitx2_Otx2	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr7_-_126377401_126377450	0.0732417	Pitx2_Otx2	ENSMUST00000119846.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000119754.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000032994.8|Spns1|ENSMUSG00000030741.9|spinster homolog 1
mm10_v2_chr17_-_79715034_79715047	0.0731124	Pitx2_Otx2	ENSMUST00000024894.1|Cyp1b1|ENSMUSG00000024087.3|cytochrome P450, family 1, subfamily b, polypeptide 1
mm10_v2_chr15_-_83464595_83464614	0.0730862	Pitx2_Otx2	ENSMUST00000171436.1|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chr1_-_133025330_133025391	0.0729987	Pitx2_Otx2	ENSMUST00000067429.3|Mdm4|ENSMUSG00000054387.7|transformed mouse 3T3 cell double minute 4 	ENSMUST00000067398.6|Mdm4|ENSMUSG00000054387.7|transformed mouse 3T3 cell double minute 4
mm10_v2_chr6_-_126921804_126921839	0.0725827	Pitx2_Otx2	ENSMUST00000078521.5|Dyrk4|ENSMUSG00000030345.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
mm10_v2_chr2_-_165368723_165368729	0.0724192	Pitx2_Otx2	ENSMUST00000141140.1|Zfp663|ENSMUSG00000056824.9|zinc finger protein 663 	ENSMUST00000103085.1|Zfp663|ENSMUSG00000056824.9|zinc finger protein 663
mm10_v2_chr10_+_43901782_43901845	0.0721175	Pitx2_Otx2	ENSMUST00000054418.5|Rtn4ip1|ENSMUSG00000019864.7|reticulon 4 interacting protein 1
mm10_v2_chr2_-_33428222_33428222	0.0706676	Pitx2_Otx2	ENSMUST00000091037.2|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr11_-_82829024_82829043	0.070174	Pitx2_Otx2	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr19_+_6335093_6335113	0.0700793	Pitx2_Otx2	ENSMUST00000078137.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr6_+_65042575_65042667	0.069875	Pitx2_Otx2	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chr11_-_48826655_48826655	0.0694291	Pitx2_Otx2	ENSMUST00000104959.1|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr11_+_96302595_96302595	0.0694215	Pitx2_Otx2	ENSMUST00000049272.3|Hoxb5|ENSMUSG00000038700.3|homeobox B5
mm10_v2_chr7_-_98199481_98199521	0.0664535	Pitx2_Otx2	ENSMUST00000098278.2|B3gnt6|ENSMUSG00000074004.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
mm10_v2_chr17_-_35085609_35085615	0.0664489	Pitx2_Otx2	ENSMUST00000038507.6|Ly6g6f|ENSMUSG00000034923.9|lymphocyte antigen 6 complex, locus G6F
mm10_v2_chr2_-_120563795_120563878	0.0663678	Pitx2_Otx2	ENSMUST00000055241.6|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106 	ENSMUST00000135625.1|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106
mm10_v2_chr2_-_85519018_85519033	0.0662813	Pitx2_Otx2	ENSMUST00000099923.1|4833423E24Rik|ENSMUSG00000075217.1|RIKEN cDNA 4833423E24 gene
mm10_v2_chr2_+_144594054_144594083	0.0662676	Pitx2_Otx2	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr4_-_45489794_45489794	0.0652745	Pitx2_Otx2	ENSMUST00000146236.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr4_+_49631999_49632010	0.0645715	Pitx2_Otx2	ENSMUST00000140341.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr3_+_90104128_90104143	0.0645451	Pitx2_Otx2	ENSMUST00000029548.4|Nup210l|ENSMUSG00000027939.7|nucleoporin 210-like
mm10_v2_chr18_+_24603952_24603972	0.0645295	Pitx2_Otx2	ENSMUST00000025120.6|Elp2|ENSMUSG00000024271.7|elongator acetyltransferase complex subunit 2
mm10_v2_chr5_+_140735526_140735567	0.0641302	Pitx2_Otx2	ENSMUST00000120630.2|Amz1|ENSMUSG00000050022.10|archaelysin family metallopeptidase 1
mm10_v2_chr9_+_108986163_108986163	0.0639736	Pitx2_Otx2	ENSMUST00000052724.3|Ucn2|ENSMUSG00000049699.3|urocortin 2
mm10_v2_chr17_+_47688992_47689030	0.0636731	Pitx2_Otx2	ENSMUST00000156118.1|Frs3|ENSMUSG00000023266.5|fibroblast growth factor receptor substrate 3
mm10_v2_chr11_-_116581446_116581472	0.0636615	Pitx2_Otx2	ENSMUST00000082152.4|Ube2o|ENSMUSG00000020802.8|ubiquitin-conjugating enzyme E2O
mm10_v2_chr3_+_19894855_19894894	0.0628335	Pitx2_Otx2	ENSMUST00000059704.4|4632415L05Rik|ENSMUSG00000048106.4|RIKEN cDNA 4632415L05 gene
mm10_v2_chr2_-_37422869_37422958	0.0624243	Pitx2_Otx2	ENSMUST00000112936.1|Rc3h2|ENSMUSG00000075376.4|ring finger and CCCH-type zinc finger domains 2 	ENSMUST00000112934.1|Rc3h2|ENSMUSG00000075376.4|ring finger and CCCH-type zinc finger domains 2
mm10_v2_chr7_-_99353104_99353230	0.0623527	Pitx2_Otx2	ENSMUST00000169437.1|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1 	ENSMUST00000094154.4|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm10_v2_chr5_-_137149320_137149320	0.0618207	Pitx2_Otx2	ENSMUST00000041226.8|Muc3|ENSMUSG00000037390.9|mucin 3, intestinal
mm10_v2_chr1_-_23383149_23383225	0.0612815	Pitx2_Otx2	ENSMUST00000027343.5|Ogfrl1|ENSMUSG00000026158.5|opioid growth factor receptor-like 1
mm10_v2_chr16_+_4684070_4684137	0.060432	Pitx2_Otx2	ENSMUST00000060067.5|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3 	ENSMUST00000115854.3|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3
mm10_v2_chr18_-_36766198_36766237	0.0599393	Pitx2_Otx2	ENSMUST00000061522.7|Dnd1|ENSMUSG00000044595.10|dead end homolog 1 (zebrafish)
mm10_v2_chr8_+_81856324_81856376	0.0595366	Pitx2_Otx2	ENSMUST00000109851.2|Inpp4b|ENSMUSG00000037940.9|inositol polyphosphate-4-phosphatase, type II
mm10_v2_chr7_+_15882617_15882653	0.0589843	Pitx2_Otx2	ENSMUST00000125993.1|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1 	ENSMUST00000130566.1|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1
mm10_v2_chr2_-_164071089_164071118	0.0583692	Pitx2_Otx2	ENSMUST00000018466.3|Tomm34|ENSMUSG00000018322.4|translocase of outer mitochondrial membrane 34
mm10_v2_chr1_+_153891646_153891740	0.0581383	Pitx2_Otx2	ENSMUST00000050660.4|Teddm1|ENSMUSG00000047053.4|transmembrane epididymal protein 1
mm10_v2_chr8_+_13785615_13785661	0.0580155	Pitx2_Otx2	ENSMUST00000043767.7|Upf3a|ENSMUSG00000038398.7|UPF3 regulator of nonsense transcripts homolog A (yeast)
mm10_v2_chr5_-_145167031_145167108	0.0573797	Pitx2_Otx2	ENSMUST00000031628.9|Ptcd1|ENSMUSG00000029624.10|pentatricopeptide repeat domain 1
mm10_v2_chr16_+_32271468_32271523	0.0572567	Pitx2_Otx2	ENSMUST00000093183.3|Smco1|ENSMUSG00000046345.4|single-pass membrane protein with coiled-coil domains 1
mm10_v2_chr5_-_93206489_93206498	0.0570178	Pitx2_Otx2	ENSMUST00000058550.8|Ccni|ENSMUSG00000063015.6|cyclin I
mm10_v2_chr5_-_138155694_138155744	0.0564911	Pitx2_Otx2	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr9_+_64121501_64121606	0.0546077	Pitx2_Otx2	ENSMUST00000118215.1|Lctl|ENSMUSG00000032401.9|lactase-like
mm10_v2_chr3_-_88739692_88739692	0.0544786	Pitx2_Otx2	ENSMUST00000090946.2|Gm10253|ENSMUSG00000068924.2|predicted gene 10253
mm10_v2_chr7_-_133782721_133782762	0.0538311	Pitx2_Otx2	ENSMUST00000063669.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr11_+_96034885_96034965	0.0526358	Pitx2_Otx2	ENSMUST00000006217.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) 	ENSMUST00000107700.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm10_v2_chr19_+_5447692_5447711	0.0515792	Pitx2_Otx2	ENSMUST00000025850.5|Fosl1|ENSMUSG00000024912.5|fos-like antigen 1
mm10_v2_chrX_+_106143229_106143302	0.0514267	Pitx2_Otx2	ENSMUST00000040065.3|Tlr13|ENSMUSG00000033777.3|toll-like receptor 13
mm10_v2_chr5_+_139253489_139253519	0.051294	Pitx2_Otx2	ENSMUST00000138508.1|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae) 	ENSMUST00000110878.1|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm10_v2_chr4_-_15945359_15945507	0.0512603	Pitx2_Otx2	ENSMUST00000029877.8|Decr1|ENSMUSG00000028223.8|2,4-dienoyl CoA reductase 1, mitochondrial
mm10_v2_chr19_+_6047081_6047104	0.0510221	Pitx2_Otx2	ENSMUST00000025723.8|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chrX_-_166479633_166479707	0.0506119	Pitx2_Otx2	ENSMUST00000049435.8|Rab9|ENSMUSG00000079316.4|RAB9, member RAS oncogene family
mm10_v2_chr5_-_134456227_134456263	0.0498098	Pitx2_Otx2	ENSMUST00000111244.1|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
mm10_v2_chr11_-_77787747_77787747	0.0497958	Pitx2_Otx2	ENSMUST00000092883.2|Gm10277|ENSMUSG00000069804.2|predicted gene 10277
mm10_v2_chr8_+_23139157_23139277	0.0497864	Pitx2_Otx2	ENSMUST00000174435.1|Ank1|ENSMUSG00000031543.12|ankyrin 1, erythroid
mm10_v2_chr5_-_93206428_93206470	0.0497015	Pitx2_Otx2	ENSMUST00000144514.1|Ccni|ENSMUSG00000063015.6|cyclin I
mm10_v2_chr2_+_155236529_155236599	0.048369	Pitx2_Otx2	ENSMUST00000109682.2|Dynlrb1|ENSMUSG00000047459.8|dynein light chain roadblock-type 1
mm10_v2_chr8_+_71951038_71951130	0.0481914	Pitx2_Otx2	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr7_-_30419802_30419872	0.0471405	Pitx2_Otx2	ENSMUST00000075062.3|Hcst|ENSMUSG00000064109.7|hematopoietic cell signal transducer
mm10_v2_chr9_+_38773088_38773088	0.046707	Pitx2_Otx2	ENSMUST00000062124.3|Olfr921|ENSMUSG00000049926.3|olfactory receptor 921
mm10_v2_chr4_-_132796361_132796389	0.0455823	Pitx2_Otx2	ENSMUST00000045154.5|Themis2|ENSMUSG00000037731.5|thymocyte selection associated family member 2
mm10_v2_chr4_+_108719649_108719649	0.0452565	Pitx2_Otx2	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr6_+_100833606_100833663	0.0450403	Pitx2_Otx2	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr3_+_79884576_79884597	0.0448276	Pitx2_Otx2	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr4_-_120924950_120925032	0.0447691	Pitx2_Otx2	ENSMUST00000030375.2|Exo5|ENSMUSG00000028629.3|exonuclease 5 	ENSMUST00000177880.1|Exo5|ENSMUSG00000028629.3|exonuclease 5 	ENSMUST00000156836.1|Exo5|ENSMUSG00000028629.3|exonuclease 5
mm10_v2_chr7_+_45617575_45617611	0.0447124	Pitx2_Otx2	ENSMUST00000008605.5|Fut1|ENSMUSG00000008461.5|fucosyltransferase 1
mm10_v2_chr2_+_181381235_181381365	0.044169	Pitx2_Otx2	ENSMUST00000048077.5|Lime1|ENSMUSG00000090077.3|Lck interacting transmembrane adaptor 1 	ENSMUST00000126611.1|Lime1|ENSMUSG00000090077.3|Lck interacting transmembrane adaptor 1
mm10_v2_chr2_-_119541513_119541513	0.0440256	Pitx2_Otx2	ENSMUST00000171024.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr11_+_80383309_80383336	0.0436331	Pitx2_Otx2	ENSMUST00000108216.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr10_+_80172934_80172961	0.0432593	Pitx2_Otx2	ENSMUST00000041882.6|1600002K03Rik|ENSMUSG00000035595.6|RIKEN cDNA 1600002K03 gene
mm10_v2_chr2_-_102400863_102400970	0.0423665	Pitx2_Otx2	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr9_-_41004599_41004632	0.0422344	Pitx2_Otx2	ENSMUST00000180384.1|Crtam|ENSMUSG00000032021.7|cytotoxic and regulatory T cell molecule
mm10_v2_chr16_+_11406618_11406675	0.0416656	Pitx2_Otx2	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_118597295_118597342	0.0411424	Pitx2_Otx2	ENSMUST00000121715.1|Tmc5|ENSMUSG00000030650.11|transmembrane channel-like gene family 5 	ENSMUST00000098088.4|Tmc5|ENSMUSG00000030650.11|transmembrane channel-like gene family 5
mm10_v2_chr2_-_121380940_121380947	0.0408344	Pitx2_Otx2	ENSMUST00000038389.8|Strc|ENSMUSG00000033498.8|stereocilin
mm10_v2_chr6_+_86438666_86438713	0.0399877	Pitx2_Otx2	ENSMUST00000113700.1|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr15_+_25984359_25984373	0.0389839	Pitx2_Otx2	ENSMUST00000061875.6|Zfp622|ENSMUSG00000052253.5|zinc finger protein 622
mm10_v2_chr13_-_120215213_120215213	0.0388796	Pitx2_Otx2	ENSMUST00000177561.1|Gm21762|ENSMUSG00000094027.1|predicted gene, 21762
mm10_v2_chr11_+_4267095_4267095	0.0366084	Pitx2_Otx2	ENSMUST00000040750.3|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chr17_+_25823626_25823637	0.036014	Pitx2_Otx2	ENSMUST00000026833.5|Wdr24|ENSMUSG00000025737.5|WD repeat domain 24
mm10_v2_chr2_-_126500631_126500675	0.0358388	Pitx2_Otx2	ENSMUST00000129187.1|Atp8b4|ENSMUSG00000060131.5|ATPase, class I, type 8B, member 4
mm10_v2_chr3_-_152340350_152340416	0.0351095	Pitx2_Otx2	ENSMUST00000073089.6|Fam73a|ENSMUSG00000054942.7|family with sequence similarity 73, member A 	ENSMUST00000068243.6|Fam73a|ENSMUSG00000054942.7|family with sequence similarity 73, member A
mm10_v2_chr16_+_96145391_96145448	0.0349519	Pitx2_Otx2	ENSMUST00000023913.8|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein 	ENSMUST00000135448.1|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein
mm10_v2_chr1_-_173741717_173741755	0.0342953	Pitx2_Otx2	ENSMUST00000127730.1|AI607873|ENSMUSG00000073490.4|expressed sequence AI607873
mm10_v2_chr8_-_67818218_67818269	0.0341514	Pitx2_Otx2	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr4_+_11123950_11123980	0.0340837	Pitx2_Otx2	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr11_-_109473220_109473294	0.0332084	Pitx2_Otx2	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr1_-_36683115_36683183	0.0328542	Pitx2_Otx2	ENSMUST00000170295.1|Fam178b|ENSMUSG00000046337.11|family with sequence similarity 178, member B 	ENSMUST00000114981.1|Fam178b|ENSMUSG00000046337.11|family with sequence similarity 178, member B
mm10_v2_chr11_+_23665615_23665697	0.0327858	Pitx2_Otx2	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chrX_+_56963325_56963325	0.0317542	Pitx2_Otx2	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr16_+_43247278_43247309	0.0304571	Pitx2_Otx2	ENSMUST00000114691.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000079441.6|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr9_-_14718381_14718473	0.030335	Pitx2_Otx2	ENSMUST00000115643.1|Piwil4|ENSMUSG00000036912.11|piwi-like RNA-mediated gene silencing 4
mm10_v2_chr4_+_118961578_118961612	0.0300125	Pitx2_Otx2	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr3_+_41555723_41555745	0.0298189	Pitx2_Otx2	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr1_-_173741795_173741817	0.0294082	Pitx2_Otx2	ENSMUST00000042610.7|AI607873|ENSMUSG00000073490.4|expressed sequence AI607873
mm10_v2_chr4_+_47386216_47386265	0.0285117	Pitx2_Otx2	ENSMUST00000107725.2|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr2_+_155236602_155236617	0.028089	Pitx2_Otx2	ENSMUST00000150602.1|Dynlrb1|ENSMUSG00000047459.8|dynein light chain roadblock-type 1
mm10_v2_chrX_+_36874351_36874368	0.0280272	Pitx2_Otx2	ENSMUST00000016452.7|Ube2a|ENSMUSG00000016308.9|ubiquitin-conjugating enzyme E2A
mm10_v2_chr11_+_105178765_105178807	0.0276796	Pitx2_Otx2	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr2_-_155930190_155930310	0.0275919	Pitx2_Otx2	ENSMUST00000109636.4|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109631.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr4_-_141606096_141606112	0.0274718	Pitx2_Otx2	ENSMUST00000153189.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr3_+_108571699_108571699	0.0272382	Pitx2_Otx2	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr9_-_110375430_110375430	0.0267081	Pitx2_Otx2	ENSMUST00000168137.1|5830462I19Rik|ENSMUSG00000091102.1|RIKEN cDNA 5830462I19 gene
mm10_v2_chr7_+_127296369_127296410	0.0264291	Pitx2_Otx2	ENSMUST00000170971.1|Itgal|ENSMUSG00000030830.12|integrin alpha L
mm10_v2_chr9_-_108190352_108190420	0.0261527	Pitx2_Otx2	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr17_+_13760502_13760674	0.0258115	Pitx2_Otx2	ENSMUST00000139347.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000156591.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000170827.2|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000139666.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137784.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137708.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000150848.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
mm10_v2_chr17_-_36890034_36890050	0.0242647	Pitx2_Otx2	ENSMUST00000087158.4|Trim40|ENSMUSG00000073399.3|tripartite motif-containing 40
mm10_v2_chr8_-_84197667_84197680	0.0239676	Pitx2_Otx2	ENSMUST00000181282.1|Gm26887|ENSMUSG00000097120.1|predicted gene, 26887
mm10_v2_chr14_+_32165784_32165798	0.0239321	Pitx2_Otx2	ENSMUST00000111994.3|Ncoa4|ENSMUSG00000056234.8|nuclear receptor coactivator 4 	ENSMUST00000168114.1|Ncoa4|ENSMUSG00000056234.8|nuclear receptor coactivator 4 	ENSMUST00000168034.1|Ncoa4|ENSMUSG00000056234.8|nuclear receptor coactivator 4
mm10_v2_chr10_-_14718191_14718228	0.023611	Pitx2_Otx2	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr2_-_4652086_4652140	0.0235679	Pitx2_Otx2	ENSMUST00000035721.7|Prpf18|ENSMUSG00000039449.8|PRP18 pre-mRNA processing factor 18 homolog (yeast) 	ENSMUST00000152362.1|Prpf18|ENSMUSG00000039449.8|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm10_v2_chr9_+_63602650_63602703	0.0220432	Pitx2_Otx2	ENSMUST00000041551.7|Aagab|ENSMUSG00000037257.7|alpha- and gamma-adaptin binding protein
mm10_v2_chr5_+_139211934_139212027	0.0220299	Pitx2_Otx2	ENSMUST00000148772.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1 	ENSMUST00000110882.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1
mm10_v2_chr19_+_6334979_6335070	0.0218415	Pitx2_Otx2	ENSMUST00000113504.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113502.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000079327.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000056391.8|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113501.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113500.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000166909.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr7_+_102223021_102223076	0.0213308	Pitx2_Otx2	ENSMUST00000156529.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000138479.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000126914.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000033292.7|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000146559.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr7_+_25619404_25619493	0.0208363	Pitx2_Otx2	ENSMUST00000077338.5|Atp5sl|ENSMUSG00000057229.5|ATP5S-like 	ENSMUST00000085953.3|Atp5sl|ENSMUSG00000057229.5|ATP5S-like
mm10_v2_chr16_-_38713235_38713304	0.0207759	Pitx2_Otx2	ENSMUST00000023487.4|Arhgap31|ENSMUSG00000022799.4|Rho GTPase activating protein 31
mm10_v2_chr10_-_130280218_130280242	0.0201723	Pitx2_Otx2	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr13_+_8952863_8952863	0.0192512	Pitx2_Otx2	ENSMUST00000038598.1|Idi2|ENSMUSG00000033520.1|isopentenyl-diphosphate delta isomerase 2
mm10_v2_chr11_-_32527551_32527579	0.0188008	Pitx2_Otx2	ENSMUST00000054327.2|Efcab9|ENSMUSG00000044056.3|EF-hand calcium binding domain 9
mm10_v2_chr13_-_60897439_60897455	0.0183628	Pitx2_Otx2	ENSMUST00000171347.1|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta 	ENSMUST00000021884.8|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta
mm10_v2_chr8_-_106573461_106573462	0.01801	Pitx2_Otx2	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr8_+_77549393_77549444	0.0179034	Pitx2_Otx2	ENSMUST00000056237.8|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative) 	ENSMUST00000118622.1|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative)
mm10_v2_chr7_-_45526146_45526268	0.0172178	Pitx2_Otx2	ENSMUST00000167273.1|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A 	ENSMUST00000042105.8|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm10_v2_chr11_+_11487671_11487671	0.0165662	Pitx2_Otx2	ENSMUST00000020410.4|4930415F15Rik|ENSMUSG00000020191.5|RIKEN cDNA 4930415F15 gene
mm10_v2_chr18_-_35627223_35627249	0.0164477	Pitx2_Otx2	ENSMUST00000025212.5|Slc23a1|ENSMUSG00000024354.5|solute carrier family 23 (nucleobase transporters), member 1
mm10_v2_chr6_+_121346618_121346671	0.0163249	Pitx2_Otx2	ENSMUST00000032200.9|Slc6a12|ENSMUSG00000030109.9|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
mm10_v2_chr8_-_54724474_54724504	0.0158828	Pitx2_Otx2	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr12_+_98628126_98628202	0.0158775	Pitx2_Otx2	ENSMUST00000048402.5|Spata7|ENSMUSG00000021007.7|spermatogenesis associated 7 	ENSMUST00000101144.3|Spata7|ENSMUSG00000021007.7|spermatogenesis associated 7 	ENSMUST00000101146.3|Spata7|ENSMUSG00000021007.7|spermatogenesis associated 7
mm10_v2_chr1_-_126738167_126738230	0.0156589	Pitx2_Otx2	ENSMUST00000160693.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr2_-_66256576_66256645	0.0153348	Pitx2_Otx2	ENSMUST00000125446.2|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B 	ENSMUST00000102718.3|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B
mm10_v2_chr14_+_51893610_51893677	0.0151361	Pitx2_Otx2	ENSMUST00000047726.5|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2 	ENSMUST00000161888.1|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2
mm10_v2_chr12_+_72085847_72085864	0.0150457	Pitx2_Otx2	ENSMUST00000117449.1|Jkamp|ENSMUSG00000005078.10|JNK1/MAPK8-associated membrane protein 	ENSMUST00000057257.8|Jkamp|ENSMUSG00000005078.10|JNK1/MAPK8-associated membrane protein
mm10_v2_chr17_-_6079693_6079760	0.0150115	Pitx2_Otx2	ENSMUST00000024570.5|Serac1|ENSMUSG00000015659.6|serine active site containing 1 	ENSMUST00000097432.3|Serac1|ENSMUSG00000015659.6|serine active site containing 1
mm10_v2_chr10_-_24092320_24092320	0.014392	Pitx2_Otx2	ENSMUST00000092654.2|Taar8b|ENSMUSG00000092113.1|trace amine-associated receptor 8B
mm10_v2_chr11_-_116131073_116131126	0.0139157	Pitx2_Otx2	ENSMUST00000106440.2|Trim65|ENSMUSG00000054517.3|tripartite motif-containing 65 	ENSMUST00000067632.3|Trim65|ENSMUSG00000054517.3|tripartite motif-containing 65
mm10_v2_chr14_+_24293214_24293463	0.0138028	Pitx2_Otx2	ENSMUST00000162224.1|E330034G19Rik|ENSMUSG00000038925.6|RIKEN cDNA E330034G19 gene 	ENSMUST00000163055.1|E330034G19Rik|ENSMUSG00000038925.6|RIKEN cDNA E330034G19 gene 	ENSMUST00000161740.1|E330034G19Rik|ENSMUSG00000038925.6|RIKEN cDNA E330034G19 gene 	ENSMUST00000160710.1|E330034G19Rik|ENSMUSG00000038925.6|RIKEN cDNA E330034G19 gene 	ENSMUST00000041413.5|E330034G19Rik|ENSMUSG00000038925.6|RIKEN cDNA E330034G19 gene
mm10_v2_chr9_-_44344159_44344228	0.0136377	Pitx2_Otx2	ENSMUST00000077353.7|Hmbs|ENSMUSG00000032126.9|hydroxymethylbilane synthase
mm10_v2_chr7_-_126566364_126566416	0.0135529	Pitx2_Otx2	ENSMUST00000032992.5|Eif3c|ENSMUSG00000030738.10|eukaryotic translation initiation factor 3, subunit C
mm10_v2_chr4_+_41135743_41135898	0.0130566	Pitx2_Otx2	ENSMUST00000040008.3|Ube2r2|ENSMUSG00000036241.3|ubiquitin-conjugating enzyme E2R 2
mm10_v2_chr2_+_172472512_172472535	0.0127505	Pitx2_Otx2	ENSMUST00000029007.2|Fam209|ENSMUSG00000027505.2|family with sequence similarity 209
mm10_v2_chr2_+_30952955_30953016	0.012611	Pitx2_Otx2	ENSMUST00000028199.5|Tor1b|ENSMUSG00000026848.8|torsin family 1, member B
mm10_v2_chr15_+_80287234_80287252	0.0123821	Pitx2_Otx2	ENSMUST00000160424.1|Cacna1i|ENSMUSG00000022416.9|calcium channel, voltage-dependent, alpha 1I subunit
mm10_v2_chr17_+_25727726_25727797	0.0119386	Pitx2_Otx2	ENSMUST00000047273.1|Rpusd1|ENSMUSG00000041199.2|RNA pseudouridylate synthase domain containing 1
mm10_v2_chr16_-_36131156_36131241	0.0119218	Pitx2_Otx2	ENSMUST00000161638.1|Csta|ENSMUSG00000034362.7|cystatin A 	ENSMUST00000096090.2|Csta|ENSMUSG00000034362.7|cystatin A
mm10_v2_chr10_-_127620922_127620943	0.0118623	Pitx2_Otx2	ENSMUST00000118455.1|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chr12_-_8539545_8539614	0.0110714	Pitx2_Otx2	ENSMUST00000095863.3|Slc7a15|ENSMUSG00000020600.7|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 	ENSMUST00000165657.1|Slc7a15|ENSMUSG00000020600.7|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
mm10_v2_chr5_-_65428354_65428374	0.0109463	Pitx2_Otx2	ENSMUST00000131263.1|Ugdh|ENSMUSG00000029201.8|UDP-glucose dehydrogenase
mm10_v2_chr7_-_12998140_12998171	0.0109263	Pitx2_Otx2	ENSMUST00000032539.7|Slc27a5|ENSMUSG00000030382.8|solute carrier family 27 (fatty acid transporter), member 5
mm10_v2_chr11_-_99351086_99351113	0.0100317	Pitx2_Otx2	ENSMUST00000017732.2|Krt27|ENSMUSG00000017588.2|keratin 27
mm10_v2_chr1_+_133610397_133610417	0.00969933	Pitx2_Otx2	ENSMUST00000180718.1|Gm26706|ENSMUSG00000097014.1|predicted gene, 26706
mm10_v2_chr14_+_52279132_52279188	0.00961433	Pitx2_Otx2	ENSMUST00000022766.6|Tox4|ENSMUSG00000016831.11|TOX high mobility group box family member 4
mm10_v2_chr7_-_79386943_79387027	0.0082417	Pitx2_Otx2	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr7_-_7689513_7689513	0.00812688	Pitx2_Otx2	ENSMUST00000173459.1|Vmn2r34|ENSMUSG00000070841.4|vomeronasal 2, receptor 34
mm10_v2_chr7_+_24636566_24636589	0.00790128	Pitx2_Otx2	ENSMUST00000080718.4|Lypd3|ENSMUSG00000057454.4|Ly6/Plaur domain containing 3
mm10_v2_chr11_+_17257558_17257688	0.00769194	Pitx2_Otx2	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr14_+_27000362_27000507	0.00764715	Pitx2_Otx2	ENSMUST00000035433.8|Hesx1|ENSMUSG00000040726.8|homeobox gene expressed in ES cells
mm10_v2_chr9_-_104102550_104102568	0.00755876	Pitx2_Otx2	ENSMUST00000050139.4|Ackr4|ENSMUSG00000041748.5|atypical chemokine receptor 4
mm10_v2_chr6_+_47877204_47877204	0.00686528	Pitx2_Otx2	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr9_+_100597686_100597798	0.00657947	Pitx2_Otx2	ENSMUST00000124487.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr1_+_134111233_134111248	0.00653677	Pitx2_Otx2	ENSMUST00000159963.1|Chit1|ENSMUSG00000026450.8|chitinase 1 (chitotriosidase) 	ENSMUST00000160060.1|Chit1|ENSMUSG00000026450.8|chitinase 1 (chitotriosidase)
mm10_v2_chr11_-_109828036_109828065	0.00637605	Pitx2_Otx2	ENSMUST00000106674.1|1700012B07Rik|ENSMUSG00000020617.7|RIKEN cDNA 1700012B07 gene
mm10_v2_chr7_-_16244152_16244196	0.00610305	Pitx2_Otx2	ENSMUST00000171425.1|C5ar2|ENSMUSG00000074361.3|complement component 5a receptor 2
mm10_v2_chr6_+_129408854_129408876	0.00582953	Pitx2_Otx2	ENSMUST00000058352.8|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a 	ENSMUST00000164513.2|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a 	ENSMUST00000088075.5|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a
mm10_v2_chr3_+_79884496_79884571	0.00580265	Pitx2_Otx2	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr7_+_17203469_17203485	0.00461528	Pitx2_Otx2	ENSMUST00000075934.5|Psg29|ENSMUSG00000023159.7|pregnancy-specific glycoprotein 29
mm10_v2_chr6_+_114643106_114643169	0.00400934	Pitx2_Otx2	ENSMUST00000169310.3|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182169.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000183165.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182098.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182793.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182902.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182428.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182035.1|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr8_-_70506710_70506766	0.00331977	Pitx2_Otx2	ENSMUST00000136913.1|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene 	ENSMUST00000075175.5|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene
mm10_v2_chr8_-_79399513_79399532	0.00291113	Pitx2_Otx2	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr14_-_20181773_20181790	0.00269008	Pitx2_Otx2	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr4_+_155831272_155831351	0.00236627	Pitx2_Otx2	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr10_-_80900749_80900969	0.00169326	Pitx2_Otx2	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr14_-_20546440_20546481	0.00165577	Pitx2_Otx2	ENSMUST00000161989.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr4_-_148444744_148444783	0.000436466	Pitx2_Otx2	ENSMUST00000051633.2|Ubiad1|ENSMUSG00000047719.2|UbiA prenyltransferase domain containing 1
mm10_v2_chr5_-_135394499_135394558	0.000262999	Pitx2_Otx2	ENSMUST00000065638.4|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121 	ENSMUST00000111171.2|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121
mm10_v2_chr12_-_112860886_112860967	4.04709e-05	Pitx2_Otx2	ENSMUST00000021729.7|Gpr132|ENSMUSG00000021298.7|G protein-coupled receptor 132
