mm10_v2_chr2_+_70563435_70563461	4.21238	Smad4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr2_+_70562854_70562899	3.80307	Smad4	ENSMUST00000130998.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr5_+_137288273_137288292	2.83619	Smad4	ENSMUST00000024099.4|Ache|ENSMUSG00000023328.8|acetylcholinesterase 	ENSMUST00000085934.3|Ache|ENSMUSG00000023328.8|acetylcholinesterase
mm10_v2_chr4_-_148500449_148500466	2.06558	Smad4	ENSMUST00000030840.3|Angptl7|ENSMUSG00000028989.3|angiopoietin-like 7
mm10_v2_chr8_+_54954728_54954820	1.45093	Smad4	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr11_-_99986593_99986608	1.41198	Smad4	ENSMUST00000105050.2|Krtap16-1|ENSMUSG00000078253.2|keratin associated protein 16-1
mm10_v2_chr11_-_3931960_3932159	1.37944	Smad4	ENSMUST00000109990.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000020710.4|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109989.3|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109991.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109993.2|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chr11_-_3931789_3931816	1.31041	Smad4	ENSMUST00000109992.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109988.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chr3_+_89436699_89436734	1.24979	Smad4	ENSMUST00000038942.3|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000130858.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr15_+_102102926_102102988	1.2122	Smad4	ENSMUST00000169627.1|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase 	ENSMUST00000046144.9|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase
mm10_v2_chr3_+_89436736_89436761	1.17102	Smad4	ENSMUST00000146630.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000145753.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr11_-_95514570_95514707	1.12096	Smad4	ENSMUST00000058866.7|Nxph3|ENSMUSG00000046719.7|neurexophilin 3
mm10_v2_chr5_+_30913398_30913403	1.05764	Smad4	ENSMUST00000031055.5|Emilin1|ENSMUSG00000029163.7|elastin microfibril interfacer 1
mm10_v2_chr2_-_173276144_173276189	1.0078	Smad4	ENSMUST00000139306.1|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr11_-_4160286_4160305	0.994833	Smad4	ENSMUST00000093381.4|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157 	ENSMUST00000101626.2|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157
mm10_v2_chr12_-_12941827_12941914	0.992125	Smad4	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr3_-_96220880_96220899	0.952885	Smad4	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chr17_-_28486082_28486149	0.883483	Smad4	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr11_-_106160101_106160168	0.82504	Smad4	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr9_+_59589288_59589353	0.808532	Smad4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chrX_+_136707976_136708040	0.799562	Smad4	ENSMUST00000055104.5|Tceal1|ENSMUSG00000049536.5|transcription elongation factor A (SII)-like 1
mm10_v2_chr5_+_19907502_19907551	0.788232	Smad4	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr1_-_173367638_173367695	0.781101	Smad4	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr11_-_106159902_106159927	0.774807	Smad4	ENSMUST00000064545.4|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr11_-_69122589_69122589	0.771091	Smad4	ENSMUST00000180487.1|9130213A22Rik|ENSMUSG00000097386.1|RIKEN cDNA 9130213A22 gene
mm10_v2_chr2_+_125136692_125136769	0.741071	Smad4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr9_-_14381242_14381242	0.740368	Smad4	ENSMUST00000167549.1|Endod1|ENSMUSG00000037419.8|endonuclease domain containing 1
mm10_v2_chr7_-_27181149_27181162	0.720132	Smad4	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr13_+_21735055_21735070	0.7131	Smad4	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr11_-_3504766_3504833	0.706738	Smad4	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
mm10_v2_chr11_-_106160708_106160860	0.67461	Smad4	ENSMUST00000106875.1|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr11_-_103208542_103208558	0.636618	Smad4	ENSMUST00000021323.4|1700023F06Rik|ENSMUSG00000020940.7|RIKEN cDNA 1700023F06 gene 	ENSMUST00000107026.2|1700023F06Rik|ENSMUSG00000020940.7|RIKEN cDNA 1700023F06 gene
mm10_v2_chr3_+_96221111_96221134	0.630479	Smad4	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr2_+_127247908_127247997	0.630439	Smad4	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr1_+_176814660_176814660	0.62975	Smad4	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr7_-_70360593_70360746	0.626735	Smad4	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr14_-_25903100_25903100	0.597222	Smad4	ENSMUST00000052286.8|Plac9a|ENSMUSG00000095304.2|placenta specific 9a
mm10_v2_chr17_+_72918298_72918316	0.595614	Smad4	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chrX_+_41401476_41401565	0.590778	Smad4	ENSMUST00000165288.1|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr17_-_90088343_90088373	0.588257	Smad4	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr19_+_4097392_4097415	0.586228	Smad4	ENSMUST00000174514.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2 	ENSMUST00000174149.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2
mm10_v2_chr7_+_128203598_128203612	0.573185	Smad4	ENSMUST00000177383.1|Itgad|ENSMUSG00000070369.7|integrin, alpha D
mm10_v2_chrX_+_99136119_99136138	0.568348	Smad4	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr7_+_144175513_144175529	0.566514	Smad4	ENSMUST00000105900.1|Shank2|ENSMUSG00000037541.13|SH3/ankyrin domain gene 2
mm10_v2_chr9_+_61373482_61373535	0.56541	Smad4	ENSMUST00000160541.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161207.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159630.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr9_+_61373219_61373438	0.553778	Smad4	ENSMUST00000162583.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161993.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160882.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160724.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000162973.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159050.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr19_+_4082473_4082517	0.549702	Smad4	ENSMUST00000159148.1|Cabp2|ENSMUSG00000024857.10|calcium binding protein 2
mm10_v2_chr3_+_107101551_107101567	0.535213	Smad4	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr2_+_126034967_126034980	0.525757	Smad4	ENSMUST00000110442.1|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chr2_-_128967725_128967725	0.518076	Smad4	ENSMUST00000099385.2|Gm10762|ENSMUSG00000074807.2|predicted gene 10762
mm10_v2_chr2_+_126034647_126034665	0.506623	Smad4	ENSMUST00000064794.7|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chr13_+_22043189_22043214	0.505597	Smad4	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr7_+_45215753_45215852	0.496986	Smad4	ENSMUST00000033060.6|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000155313.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000107801.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chrX_-_72274747_72274803	0.496554	Smad4	ENSMUST00000064780.3|Gabre|ENSMUSG00000031340.8|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm10_v2_chr11_+_105975204_105975215	0.495333	Smad4	ENSMUST00000001964.7|Ace|ENSMUSG00000020681.8|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm10_v2_chr9_+_61373608_61373672	0.489971	Smad4	ENSMUST00000161689.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr6_-_138422898_138422999	0.482919	Smad4	ENSMUST00000161450.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000163024.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000162185.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr1_+_162477680_162477680	0.478064	Smad4	ENSMUST00000159707.1|Gm10176|ENSMUSG00000066752.4|predicted gene 10176
mm10_v2_chr10_+_91082940_91083028	0.476793	Smad4	ENSMUST00000020150.3|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr9_+_108953578_108953593	0.476222	Smad4	ENSMUST00000112070.1|Col7a1|ENSMUSG00000025650.6|collagen, type VII, alpha 1
mm10_v2_chr1_-_153186447_153186447	0.471648	Smad4	ENSMUST00000027753.6|Lamc2|ENSMUSG00000026479.7|laminin, gamma 2
mm10_v2_chr11_-_5261558_5261637	0.454427	Smad4	ENSMUST00000020662.8|Kremen1|ENSMUSG00000020393.10|kringle containing transmembrane protein 1
mm10_v2_chr18_-_38918642_38918771	0.453966	Smad4	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr3_-_116968969_116969004	0.450628	Smad4	ENSMUST00000143611.1|Palmd|ENSMUSG00000033377.8|palmdelphin 	ENSMUST00000040097.7|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr10_+_75589363_75589390	0.443587	Smad4	ENSMUST00000072217.2|Ggt5|ENSMUSG00000006344.10|gamma-glutamyltransferase 5
mm10_v2_chr17_+_34597852_34597894	0.441379	Smad4	ENSMUST00000174496.2|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000015596.3|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000173992.1|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor
mm10_v2_chr11_-_26591729_26591729	0.434341	Smad4	ENSMUST00000109504.1|Vrk2|ENSMUSG00000064090.8|vaccinia related kinase 2
mm10_v2_chr1_+_152399824_152399881	0.429572	Smad4	ENSMUST00000044311.8|Colgalt2|ENSMUSG00000032649.8|collagen beta(1-O)galactosyltransferase 2
mm10_v2_chr9_+_57940104_57940120	0.418807	Smad4	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr6_-_30693676_30693749	0.412857	Smad4	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr6_+_113472276_113472291	0.411746	Smad4	ENSMUST00000147316.1|Il17rc|ENSMUSG00000030281.10|interleukin 17 receptor C
mm10_v2_chr5_+_111417263_111417442	0.409439	Smad4	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr12_+_36157124_36157238	0.407054	Smad4	ENSMUST00000041640.3|Ankmy2|ENSMUSG00000036188.3|ankyrin repeat and MYND domain containing 2
mm10_v2_chr2_+_29869484_29869544	0.405929	Smad4	ENSMUST00000047521.6|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule 	ENSMUST00000134152.1|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule
mm10_v2_chr17_+_24352037_24352149	0.401823	Smad4	ENSMUST00000079594.5|Abca3|ENSMUSG00000024130.9|ATP-binding cassette, sub-family A (ABC1), member 3
mm10_v2_chr9_+_108953597_108953745	0.401758	Smad4	ENSMUST00000026740.5|Col7a1|ENSMUSG00000025650.6|collagen, type VII, alpha 1
mm10_v2_chr3_-_116968827_116968858	0.398614	Smad4	ENSMUST00000119557.1|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr2_+_152736244_152736261	0.39628	Smad4	ENSMUST00000038368.8|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1 	ENSMUST00000109824.1|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1
mm10_v2_chrX_+_101383726_101383741	0.389987	Smad4	ENSMUST00000119190.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr12_+_13269111_13269154	0.378285	Smad4	ENSMUST00000042953.8|Nbas|ENSMUSG00000020576.9|neuroblastoma amplified sequence
mm10_v2_chr17_+_75178911_75178961	0.376854	Smad4	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr5_+_117841839_117841857	0.372492	Smad4	ENSMUST00000142742.2|Nos1|ENSMUSG00000029361.12|nitric oxide synthase 1, neuronal
mm10_v2_chr19_-_23448322_23448350	0.370657	Smad4	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr12_+_76404168_76404264	0.360645	Smad4	ENSMUST00000080449.5|Hspa2|ENSMUSG00000059970.6|heat shock protein 2
mm10_v2_chr11_-_49113757_49113757	0.357605	Smad4	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr17_+_75178797_75178824	0.357505	Smad4	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr2_+_120476911_120476976	0.35335	Smad4	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr11_-_89302545_89302567	0.347966	Smad4	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr4_+_138967112_138967127	0.341105	Smad4	ENSMUST00000116094.2|Rnf186|ENSMUSG00000070661.5|ring finger protein 186
mm10_v2_chr16_-_45158183_45158286	0.333157	Smad4	ENSMUST00000114600.1|Slc35a5|ENSMUSG00000022664.5|solute carrier family 35, member A5
mm10_v2_chr5_+_75574916_75575001	0.331249	Smad4	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr11_+_35121126_35121224	0.331219	Smad4	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr11_+_115420059_115420128	0.330539	Smad4	ENSMUST00000103035.3|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr18_-_35498856_35498925	0.325826	Smad4	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr6_+_116650674_116650690	0.325378	Smad4	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chrX_+_159708593_159708612	0.313897	Smad4	ENSMUST00000080394.6|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr5_+_19907774_19907861	0.31371	Smad4	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr13_-_23934156_23934225	0.308682	Smad4	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr10_+_91083036_91083075	0.305241	Smad4	ENSMUST00000020149.5|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr5_-_24601961_24602012	0.30275	Smad4	ENSMUST00000030791.7|Smarcd3|ENSMUSG00000028949.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
mm10_v2_chr5_-_92278155_92278171	0.295939	Smad4	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr14_-_64949838_64949886	0.292527	Smad4	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr9_+_21424984_21425244	0.291255	Smad4	ENSMUST00000172482.1|Dnm2|ENSMUSG00000033335.11|dynamin 2 	ENSMUST00000174050.1|Dnm2|ENSMUSG00000033335.11|dynamin 2
mm10_v2_chr3_+_63295815_63295872	0.290568	Smad4	ENSMUST00000029400.1|Mme|ENSMUSG00000027820.7|membrane metallo endopeptidase
mm10_v2_chr15_+_81936753_81936839	0.290299	Smad4	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chrX_+_151803313_151803376	0.289004	Smad4	ENSMUST00000026292.8|Huwe1|ENSMUSG00000025261.11|HECT, UBA and WWE domain containing 1
mm10_v2_chr13_-_22042949_22042978	0.288783	Smad4	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr7_-_30362772_30362772	0.287026	Smad4	ENSMUST00000046351.5|Lrfn3|ENSMUSG00000036957.7|leucine rich repeat and fibronectin type III domain containing 3
mm10_v2_chr4_+_133011506_133011546	0.276037	Smad4	ENSMUST00000105915.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1 	ENSMUST00000105916.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1
mm10_v2_chr17_-_25081138_25081201	0.275621	Smad4	ENSMUST00000024984.6|Tmem204|ENSMUSG00000024168.7|transmembrane protein 204
mm10_v2_chr2_+_27079371_27079385	0.274034	Smad4	ENSMUST00000091233.6|Adamtsl2|ENSMUSG00000036040.8|ADAMTS-like 2
mm10_v2_chr6_+_113471427_113471475	0.265328	Smad4	ENSMUST00000058300.7|Il17rc|ENSMUSG00000030281.10|interleukin 17 receptor C
mm10_v2_chr7_-_100855403_100855440	0.262795	Smad4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr15_-_38300693_38300715	0.262535	Smad4	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr9_-_49798729_49798855	0.261643	Smad4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr11_+_69846610_69846659	0.260974	Smad4	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr9_-_21852603_21852644	0.256744	Smad4	ENSMUST00000034728.7|Dock6|ENSMUSG00000032198.8|dedicator of cytokinesis 6
mm10_v2_chr1_-_45503282_45503282	0.255877	Smad4	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chrX_-_7898864_7898912	0.246764	Smad4	ENSMUST00000154552.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr19_+_4231899_4231928	0.24639	Smad4	ENSMUST00000025773.3|Pold4|ENSMUSG00000024854.3|polymerase (DNA-directed), delta 4
mm10_v2_chr7_-_119895697_119895752	0.241154	Smad4	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr1_+_162639148_162639158	0.23773	Smad4	ENSMUST00000028020.9|Myoc|ENSMUSG00000026697.9|myocilin
mm10_v2_chr6_-_83775767_83775826	0.233212	Smad4	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr7_+_117380937_117380992	0.227768	Smad4	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr10_-_127534540_127534566	0.219242	Smad4	ENSMUST00000095266.2|Nxph4|ENSMUSG00000040258.6|neurexophilin 4
mm10_v2_chr11_-_116110211_116110259	0.219131	Smad4	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr10_+_80150448_80150482	0.217883	Smad4	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr6_-_112388013_112388037	0.211031	Smad4	ENSMUST00000060847.5|Ssu2|ENSMUSG00000034387.6|ssu-2 homolog (C. elegans)
mm10_v2_chr11_+_115420138_115420182	0.210421	Smad4	ENSMUST00000106533.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2 	ENSMUST00000123345.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr5_+_121795034_121795034	0.209397	Smad4	ENSMUST00000162327.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr5_+_64803513_64803530	0.204049	Smad4	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr4_+_42950369_42950445	0.202799	Smad4	ENSMUST00000084662.5|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5
mm10_v2_chr11_-_100762928_100762936	0.202497	Smad4	ENSMUST00000107360.2|Hcrt|ENSMUSG00000045471.4|hypocretin 	ENSMUST00000055083.3|Hcrt|ENSMUSG00000045471.4|hypocretin
mm10_v2_chr7_+_123377982_123378086	0.199204	Smad4	ENSMUST00000033025.5|Lcmt1|ENSMUSG00000030763.6|leucine carboxyl methyltransferase 1
mm10_v2_chr6_+_108660772_108660874	0.19808	Smad4	ENSMUST00000163617.1|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr13_-_102958084_102958173	0.192669	Smad4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr1_-_75232093_75232093	0.187473	Smad4	ENSMUST00000180101.1|A630095N17Rik|ENSMUSG00000096094.1|RIKEN cDNA A630095N17 gene
mm10_v2_chr14_+_50944499_50944514	0.186592	Smad4	ENSMUST00000178092.1|Pnp|ENSMUSG00000021871.11|purine-nucleoside phosphorylase
mm10_v2_chr18_-_84086379_84086404	0.186547	Smad4	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr5_-_24445166_24445220	0.185407	Smad4	ENSMUST00000115043.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase 	ENSMUST00000115041.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr7_+_101421691_101421726	0.175684	Smad4	ENSMUST00000163751.2|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000084894.7|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000166652.1|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated
mm10_v2_chrX_+_150588223_150588260	0.174856	Smad4	ENSMUST00000153221.1|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr1_+_72583245_72583282	0.169231	Smad4	ENSMUST00000145868.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000133123.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000047615.8|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
mm10_v2_chr15_-_103366763_103366798	0.16923	Smad4	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr4_-_115781012_115781023	0.163218	Smad4	ENSMUST00000106521.1|Tex38|ENSMUSG00000044556.3|testis expressed 38
mm10_v2_chr2_+_128967383_128967443	0.161686	Smad4	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr10_-_109764840_109764840	0.154744	Smad4	ENSMUST00000163071.1|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr4_-_119190005_119190016	0.150019	Smad4	ENSMUST00000138395.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein 	ENSMUST00000156746.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein
mm10_v2_chr6_-_72958097_72958302	0.148968	Smad4	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr4_-_129742275_129742312	0.146566	Smad4	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr14_-_54577578_54577661	0.144276	Smad4	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr1_+_153652943_153653025	0.143102	Smad4	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr2_+_96318014_96318216	0.139363	Smad4	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr17_+_32403006_32403006	0.137088	Smad4	ENSMUST00000065921.5|A530088E08Rik|ENSMUSG00000053467.5|RIKEN cDNA A530088E08 gene
mm10_v2_chr9_-_45936049_45936106	0.136104	Smad4	ENSMUST00000034590.2|Tagln|ENSMUSG00000032085.4|transgelin
mm10_v2_chrX_-_150812932_150813154	0.13571	Smad4	ENSMUST00000131241.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000147152.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000143843.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr10_+_90576872_90576992	0.133754	Smad4	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr9_+_122888471_122888471	0.13266	Smad4	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr10_+_127739516_127739592	0.132218	Smad4	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr11_-_48816936_48816961	0.1313	Smad4	ENSMUST00000140800.1|Trim41|ENSMUSG00000040365.8|tripartite motif-containing 41
mm10_v2_chrX_-_7898950_7899000	0.123935	Smad4	ENSMUST00000115655.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1 	ENSMUST00000156741.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr15_+_58510037_58510053	0.11994	Smad4	ENSMUST00000161028.1|Fer1l6|ENSMUSG00000037106.8|fer-1-like 6 (C. elegans)
mm10_v2_chr17_+_34263209_34263256	0.116269	Smad4	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr5_-_24445254_24445287	0.110166	Smad4	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr6_+_38433913_38433965	0.109882	Smad4	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr6_-_72958465_72958496	0.0985214	Smad4	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr18_-_52529847_52529890	0.0984171	Smad4	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr8_-_34146974_34147033	0.0962099	Smad4	ENSMUST00000033910.8|Leprotl1|ENSMUSG00000031513.8|leptin receptor overlapping transcript-like 1
mm10_v2_chr11_+_53433299_53433357	0.0953178	Smad4	ENSMUST00000018382.6|Gdf9|ENSMUSG00000018238.6|growth differentiation factor 9
mm10_v2_chr15_+_89532816_89532890	0.092313	Smad4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chrX_+_18162575_18162657	0.0858962	Smad4	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr7_-_126897424_126897483	0.0843484	Smad4	ENSMUST00000120007.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr1_-_54194048_54194048	0.0809709	Smad4	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr7_+_127485221_127485221	0.0770113	Smad4	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr8_-_92356103_92356120	0.0704802	Smad4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr18_+_57133065_57133090	0.0619825	Smad4	ENSMUST00000075770.6|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr6_-_129451906_129452000	0.0589123	Smad4	ENSMUST00000037481.7|Clec1a|ENSMUSG00000033082.8|C-type lectin domain family 1, member a
mm10_v2_chr6_+_48929891_48929897	0.0582352	Smad4	ENSMUST00000031837.7|1600015I10Rik|ENSMUSG00000029813.8|RIKEN cDNA 1600015I10 gene
mm10_v2_chr15_-_89429093_89429223	0.0562986	Smad4	ENSMUST00000170460.1|Chkb|ENSMUSG00000022617.8|choline kinase beta
mm10_v2_chr9_-_105521147_105521265	0.0527279	Smad4	ENSMUST00000176770.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000085133.6|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr11_+_73240310_73240310	0.0512037	Smad4	ENSMUST00000138853.1|Trpv1|ENSMUSG00000005952.9|transient receptor potential cation channel, subfamily V, member 1
mm10_v2_chr10_+_90576708_90576766	0.0472999	Smad4	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr9_+_13621646_13621646	0.0450993	Smad4	ENSMUST00000034401.8|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr10_+_90576777_90576815	0.0450371	Smad4	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr19_+_46328179_46328205	0.0437977	Smad4	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr11_-_103208523_103208534	0.0434992	Smad4	ENSMUST00000174567.1|1700023F06Rik|ENSMUSG00000020940.7|RIKEN cDNA 1700023F06 gene
mm10_v2_chr9_-_49798905_49798931	0.038573	Smad4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr1_-_133801031_133801041	0.0381477	Smad4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr7_-_45870928_45870986	0.0378676	Smad4	ENSMUST00000146672.1|Grin2d|ENSMUSG00000002771.10|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm10_v2_chr10_-_92164666_92164754	0.0366486	Smad4	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr15_-_93336800_93336852	0.0363644	Smad4	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr1_+_153891646_153891740	0.0339088	Smad4	ENSMUST00000050660.4|Teddm1|ENSMUSG00000047053.4|transmembrane epididymal protein 1
mm10_v2_chr6_+_15720654_15720747	0.0305559	Smad4	ENSMUST00000101663.3|Mdfic|ENSMUSG00000041390.12|MyoD family inhibitor domain containing
mm10_v2_chr14_+_64950037_64950056	0.0295296	Smad4	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr1_+_177445660_177445821	0.0190125	Smad4	ENSMUST00000077225.6|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr5_-_137741102_137741185	0.016699	Smad4	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr7_+_141216626_141216700	0.0126853	Smad4	ENSMUST00000141804.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 	ENSMUST00000148975.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm10_v2_chr11_+_97663366_97663414	0.0120333	Smad4	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr7_+_45216671_45216695	0.0107002	Smad4	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr3_+_88607742_88607791	0.0101112	Smad4	ENSMUST00000175903.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr14_-_104467984_104468041	0.00897667	Smad4	ENSMUST00000053016.8|Pou4f1|ENSMUSG00000048349.8|POU domain, class 4, transcription factor 1
mm10_v2_chr19_-_5295397_5295455	0.0081322	Smad4	ENSMUST00000025774.9|Sf3b2|ENSMUSG00000024853.9|splicing factor 3b, subunit 2
mm10_v2_chr3_+_127633134_127633140	0.000210216	Smad4	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
