mm10_v2_chr17_-_17624458_17624496	0.634658	UGCAUAG	ENSMUST00000041047.2|Lnpep|ENSMUSG00000023845.6|leucyl/cystinyl aminopeptidase
mm10_v2_chr5_+_110879788_110879842	0.60346	UGCAUAG	ENSMUST00000156290.2|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28 	ENSMUST00000040111.9|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28
mm10_v2_chr2_+_21367532_21367542	0.535538	UGCAUAG	ENSMUST00000055946.7|Gpr158|ENSMUSG00000045967.11|G protein-coupled receptor 158
mm10_v2_chr13_+_12565868_12565883	0.501135	UGCAUAG	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr11_-_47379405_47379522	0.467681	UGCAUAG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr7_+_117380937_117380992	0.446944	UGCAUAG	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr5_-_8997324_8997324	0.446483	UGCAUAG	ENSMUST00000003720.4|Crot|ENSMUSG00000003623.4|carnitine O-octanoyltransferase
mm10_v2_chr4_+_11156411_11156453	0.44323	UGCAUAG	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr8_+_60632856_60632905	0.433333	UGCAUAG	ENSMUST00000160719.1|Mfap3l|ENSMUSG00000031647.4|microfibrillar-associated protein 3-like
mm10_v2_chr15_-_75747922_75747922	0.417064	UGCAUAG	ENSMUST00000062002.4|Mafa|ENSMUSG00000047591.4|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)
mm10_v2_chr2_-_110950923_110950923	0.409422	UGCAUAG	ENSMUST00000099623.3|Ano3|ENSMUSG00000074968.5|anoctamin 3
mm10_v2_chr2_+_155381808_155381884	0.383919	UGCAUAG	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr10_-_30842765_30842801	0.37041	UGCAUAG	ENSMUST00000019924.8|Hey2|ENSMUSG00000019789.8|hairy/enhancer-of-split related with YRPW motif 2
mm10_v2_chr1_+_164062070_164062098	0.366721	UGCAUAG	ENSMUST00000097491.3|Sell|ENSMUSG00000026581.8|selectin, lymphocyte 	ENSMUST00000027871.7|Sell|ENSMUSG00000026581.8|selectin, lymphocyte
mm10_v2_chr19_+_44989073_44989101	0.365249	UGCAUAG	ENSMUST00000026225.8|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr15_-_71727815_71727848	0.340636	UGCAUAG	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr6_-_39206782_39206831	0.32174	UGCAUAG	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr12_+_52699297_52699411	0.320719	UGCAUAG	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr4_+_54947976_54948054	0.319046	UGCAUAG	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr16_-_74411292_74411430	0.318577	UGCAUAG	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr3_+_107101551_107101567	0.316362	UGCAUAG	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr10_-_125328957_125328968	0.300806	UGCAUAG	ENSMUST00000063318.2|Slc16a7|ENSMUSG00000020102.8|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm10_v2_chr10_-_12861735_12861735	0.291181	UGCAUAG	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr12_+_4917376_4917438	0.285047	UGCAUAG	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr6_+_38433913_38433965	0.281075	UGCAUAG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr13_+_13590402_13590456	0.279637	UGCAUAG	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr12_+_64917901_64917944	0.271219	UGCAUAG	ENSMUST00000058135.4|Gm527|ENSMUSG00000047227.4|predicted gene 527
mm10_v2_chr19_+_41482632_41482688	0.271124	UGCAUAG	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chrX_+_7822289_7822289	0.269018	UGCAUAG	ENSMUST00000009875.4|Kcnd1|ENSMUSG00000009731.4|potassium voltage-gated channel, Shal-related family, member 1
mm10_v2_chr7_+_113513829_113513846	0.267128	UGCAUAG	ENSMUST00000033018.8|Far1|ENSMUSG00000030759.10|fatty acyl CoA reductase 1
mm10_v2_chr6_+_97807014_97807067	0.252341	UGCAUAG	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr19_+_40894692_40894736	0.251956	UGCAUAG	ENSMUST00000050092.6|Zfp518a|ENSMUSG00000049164.6|zinc finger protein 518A
mm10_v2_chr5_+_26904682_26904710	0.248715	UGCAUAG	ENSMUST00000120555.1|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr5_-_65492984_65493051	0.248237	UGCAUAG	ENSMUST00000139122.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr8_+_76899772_76899828	0.248027	UGCAUAG	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr18_+_67933257_67933257	0.246594	UGCAUAG	ENSMUST00000063775.3|Ldlrad4|ENSMUSG00000024544.8|low density lipoprotein receptor class A domain containing 4
mm10_v2_chr5_+_88886809_88886825	0.246494	UGCAUAG	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr1_-_156036473_156036480	0.239047	UGCAUAG	ENSMUST00000097527.3|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000027738.7|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr19_+_23723279_23723279	0.235055	UGCAUAG	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr5_+_30588078_30588171	0.23276	UGCAUAG	ENSMUST00000066295.2|Kcnk3|ENSMUSG00000049265.6|potassium channel, subfamily K, member 3
mm10_v2_chr7_-_47008397_47008421	0.228866	UGCAUAG	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr1_+_59764264_59764286	0.228179	UGCAUAG	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr17_+_14943184_14943281	0.227666	UGCAUAG	ENSMUST00000052691.8|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000164837.2|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000174004.1|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene
mm10_v2_chr4_+_100095791_100095867	0.227255	UGCAUAG	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr1_-_190978954_190978998	0.225961	UGCAUAG	ENSMUST00000047409.6|Vash2|ENSMUSG00000037568.6|vasohibin 2
mm10_v2_chr8_-_80880479_80880499	0.223184	UGCAUAG	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr3_-_131344892_131344940	0.221221	UGCAUAG	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr7_+_67952817_67952859	0.217745	UGCAUAG	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr3_-_89387132_89387189	0.215987	UGCAUAG	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr3_+_96104498_96104571	0.21204	UGCAUAG	ENSMUST00000132980.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000138206.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000090785.2|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000035519.5|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B
mm10_v2_chr9_+_59578192_59578337	0.210675	UGCAUAG	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr9_+_74861888_74861921	0.209437	UGCAUAG	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr17_-_51832666_51832678	0.205554	UGCAUAG	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr1_-_13372434_13372457	0.20188	UGCAUAG	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr15_+_80711292_80711340	0.201194	UGCAUAG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr6_+_54816906_54816920	0.198564	UGCAUAG	ENSMUST00000079869.6|Znrf2|ENSMUSG00000058446.8|zinc and ring finger 2
mm10_v2_chr9_-_54501496_54501644	0.197723	UGCAUAG	ENSMUST00000118600.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2 	ENSMUST00000118163.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2
mm10_v2_chr9_-_52168111_52168111	0.196205	UGCAUAG	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr2_-_167062981_167063048	0.194954	UGCAUAG	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr4_+_32657107_32657166	0.191279	UGCAUAG	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chr16_-_4213404_4213404	0.19119	UGCAUAG	ENSMUST00000023165.6|Crebbp|ENSMUSG00000022521.8|CREB binding protein
mm10_v2_chr10_-_123076367_123076505	0.189497	UGCAUAG	ENSMUST00000073792.3|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast) 	ENSMUST00000170935.1|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast) 	ENSMUST00000037557.7|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast)
mm10_v2_chr14_+_30479565_30479685	0.184438	UGCAUAG	ENSMUST00000022535.7|Dcp1a|ENSMUSG00000021962.8|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm10_v2_chr8_-_34965631_34965714	0.183445	UGCAUAG	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr18_+_57354733_57354797	0.182145	UGCAUAG	ENSMUST00000025490.8|Prrc1|ENSMUSG00000024594.8|proline-rich coiled-coil 1
mm10_v2_chr9_-_106789130_106789213	0.180965	UGCAUAG	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr2_-_24763047_24763153	0.179077	UGCAUAG	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr12_-_118301429_118301458	0.177698	UGCAUAG	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr2_-_120970706_120970761	0.176979	UGCAUAG	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr5_-_91963068_91963105	0.175982	UGCAUAG	ENSMUST00000031345.8|Rchy1|ENSMUSG00000029397.9|ring finger and CHY zinc finger domain containing 1
mm10_v2_chr12_+_4592992_4593087	0.174379	UGCAUAG	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr4_-_110287479_110287534	0.174009	UGCAUAG	ENSMUST00000106598.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000102723.4|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000153906.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr4_-_143212691_143212728	0.17382	UGCAUAG	ENSMUST00000105778.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain 	ENSMUST00000134791.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain
mm10_v2_chr1_-_3671498_3671498	0.171318	UGCAUAG	ENSMUST00000070533.4|Xkr4|ENSMUSG00000051951.5|X Kell blood group precursor related family member 4
mm10_v2_chr7_-_127824469_127824580	0.17114	UGCAUAG	ENSMUST00000106267.3|Stx1b|ENSMUSG00000030806.5|syntaxin 1B
mm10_v2_chr14_-_36968769_36968793	0.167908	UGCAUAG	ENSMUST00000090024.4|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr8_-_11008458_11008458	0.164362	UGCAUAG	ENSMUST00000040514.6|Irs2|ENSMUSG00000038894.6|insulin receptor substrate 2
mm10_v2_chr17_+_25188380_25188418	0.163193	UGCAUAG	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chrY_-_1245685_1245752	0.161909	UGCAUAG	ENSMUST00000143286.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000137048.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000069309.7|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000139365.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr14_+_49066495_49066587	0.161735	UGCAUAG	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr1_-_166002591_166002609	0.160443	UGCAUAG	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr18_+_37725706_37725754	0.159759	UGCAUAG	ENSMUST00000066149.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr2_+_172345565_172345590	0.15971	UGCAUAG	ENSMUST00000028995.4|Fam210b|ENSMUSG00000027495.4|family with sequence similarity 210, member B
mm10_v2_chr4_-_135433744_135433869	0.158674	UGCAUAG	ENSMUST00000156635.1|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3 	ENSMUST00000030606.7|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3
mm10_v2_chr11_+_75193783_75193864	0.15845	UGCAUAG	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr11_+_79339792_79339913	0.15813	UGCAUAG	ENSMUST00000108251.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1 	ENSMUST00000071325.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1
mm10_v2_chr9_+_74953053_74953091	0.156853	UGCAUAG	ENSMUST00000170846.1|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr7_+_122067164_122067216	0.153947	UGCAUAG	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr13_+_16014457_16014475	0.153927	UGCAUAG	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr3_+_103914560_103914605	0.152611	UGCAUAG	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr12_+_71831064_71831178	0.152352	UGCAUAG	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr2_-_45113255_45113279	0.150984	UGCAUAG	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr5_+_57718021_57718104	0.148404	UGCAUAG	ENSMUST00000094783.3|Pcdh7|ENSMUSG00000029108.8|protocadherin 7 	ENSMUST00000068110.7|Pcdh7|ENSMUSG00000029108.8|protocadherin 7
mm10_v2_chr8_+_40511769_40511787	0.146554	UGCAUAG	ENSMUST00000098817.2|Vps37a|ENSMUSG00000031600.10|vacuolar protein sorting 37A (yeast)
mm10_v2_chr2_-_73892530_73892555	0.145936	UGCAUAG	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr5_-_106696819_106696839	0.145527	UGCAUAG	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr14_+_25459206_25459225	0.144273	UGCAUAG	ENSMUST00000162645.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr5_-_51553896_51553921	0.144028	UGCAUAG	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr15_+_6708372_6708396	0.142662	UGCAUAG	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr14_+_99298652_99298715	0.14249	UGCAUAG	ENSMUST00000005279.6|Klf5|ENSMUSG00000005148.7|Kruppel-like factor 5
mm10_v2_chr10_-_109010955_109010983	0.141394	UGCAUAG	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr11_+_72796164_72796246	0.14085	UGCAUAG	ENSMUST00000172220.1|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr3_+_28263205_28263215	0.1405	UGCAUAG	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr11_+_110399115_110399155	0.139967	UGCAUAG	ENSMUST00000020949.5|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6 	ENSMUST00000100260.1|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6
mm10_v2_chr4_-_129227883_129227923	0.139897	UGCAUAG	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr13_+_18948344_18948417	0.139351	UGCAUAG	ENSMUST00000003345.7|Amph|ENSMUSG00000021314.7|amphiphysin
mm10_v2_chr9_-_123632545_123632565	0.139038	UGCAUAG	ENSMUST00000026273.8|Slc6a20b|ENSMUSG00000025243.8|solute carrier family 6 (neurotransmitter transporter), member 20B
mm10_v2_chr7_-_67372846_67372858	0.137874	UGCAUAG	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr7_-_66689589_66689603	0.137309	UGCAUAG	ENSMUST00000124899.1|Asb7|ENSMUSG00000030509.10|ankyrin repeat and SOCS box-containing 7
mm10_v2_chrX_+_136707976_136708040	0.132054	UGCAUAG	ENSMUST00000055104.5|Tceal1|ENSMUSG00000049536.5|transcription elongation factor A (SII)-like 1
mm10_v2_chr1_-_190170671_190170744	0.131919	UGCAUAG	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr18_+_51117754_51117898	0.131768	UGCAUAG	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr2_-_62412219_62412234	0.131749	UGCAUAG	ENSMUST00000047812.7|Dpp4|ENSMUSG00000035000.8|dipeptidylpeptidase 4
mm10_v2_chr12_-_100725028_100725081	0.129898	UGCAUAG	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr9_-_105495037_105495117	0.128934	UGCAUAG	ENSMUST00000176190.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000163879.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000112558.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000176390.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr12_-_102878406_102878449	0.123641	UGCAUAG	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr1_-_77515048_77515102	0.123385	UGCAUAG	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr12_+_52516077_52516077	0.122899	UGCAUAG	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr1_+_127868773_127868807	0.122878	UGCAUAG	ENSMUST00000037649.5|Rab3gap1|ENSMUSG00000036104.5|RAB3 GTPase activating protein subunit 1
mm10_v2_chr18_+_36281069_36281151	0.122374	UGCAUAG	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr11_-_104442232_104442291	0.120761	UGCAUAG	ENSMUST00000106977.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1 	ENSMUST00000106972.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1
mm10_v2_chr14_-_105176860_105176918	0.120545	UGCAUAG	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chrX_+_159627265_159627298	0.118628	UGCAUAG	ENSMUST00000112456.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr18_+_34220978_34221020	0.117677	UGCAUAG	ENSMUST00000079362.5|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli 	ENSMUST00000115781.3|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli
mm10_v2_chr12_+_81859964_81860036	0.117568	UGCAUAG	ENSMUST00000021567.5|Pcnx|ENSMUSG00000021140.8|pecanex homolog (Drosophila)
mm10_v2_chrX_+_161162744_161162775	0.115736	UGCAUAG	ENSMUST00000074802.5|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000019101.4|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000112345.1|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila)
mm10_v2_chr7_+_91090697_91090727	0.115067	UGCAUAG	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr11_+_117654798_117654824	0.114852	UGCAUAG	ENSMUST00000106344.1|Tnrc6c|ENSMUSG00000025571.7|trinucleotide repeat containing 6C
mm10_v2_chr5_+_53809613_53809629	0.113119	UGCAUAG	ENSMUST00000037337.6|Tbc1d19|ENSMUSG00000039178.6|TBC1 domain family, member 19
mm10_v2_chr4_-_19708922_19709004	0.110943	UGCAUAG	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr14_-_79301623_79301645	0.110543	UGCAUAG	ENSMUST00000022595.7|Rgcc|ENSMUSG00000022018.7|regulator of cell cycle
mm10_v2_chr11_+_69088490_69088553	0.110513	UGCAUAG	ENSMUST00000021273.6|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2 	ENSMUST00000117780.1|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2
mm10_v2_chr18_-_84086379_84086404	0.109455	UGCAUAG	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr7_+_123123870_123123901	0.108638	UGCAUAG	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr7_-_121707253_121707460	0.108452	UGCAUAG	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr1_-_16519284_16519336	0.10819	UGCAUAG	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr7_-_30588717_30588749	0.105743	UGCAUAG	ENSMUST00000006470.7|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B 	ENSMUST00000108154.2|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B
mm10_v2_chr1_-_151428440_151428474	0.105318	UGCAUAG	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr5_-_122779278_122779434	0.104927	UGCAUAG	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr3_-_85746266_85746266	0.103067	UGCAUAG	ENSMUST00000118408.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr6_+_36388055_36388084	0.10288	UGCAUAG	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr3_+_52268337_52268388	0.101851	UGCAUAG	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr10_+_79854618_79854640	0.101825	UGCAUAG	ENSMUST00000165704.1|Ptbp1|ENSMUSG00000006498.10|polypyrimidine tract binding protein 1
mm10_v2_chr5_-_131616599_131616611	0.0996335	UGCAUAG	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr11_+_102284931_102285033	0.0994211	UGCAUAG	ENSMUST00000036376.6|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2 	ENSMUST00000100387.4|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr2_+_37452231_37452286	0.096989	UGCAUAG	ENSMUST00000148470.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000066055.3|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000112920.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr13_-_17805093_17805189	0.0968462	UGCAUAG	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr8_-_70439557_70439612	0.09442	UGCAUAG	ENSMUST00000076615.5|Crtc1|ENSMUSG00000003575.7|CREB regulated transcription coactivator 1
mm10_v2_chr3_-_133544390_133544412	0.0940458	UGCAUAG	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr9_-_44881274_44881323	0.0926192	UGCAUAG	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr7_+_49246812_49246844	0.0907835	UGCAUAG	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr8_+_9977707_9977725	0.0906883	UGCAUAG	ENSMUST00000139793.1|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13 	ENSMUST00000048216.5|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13
mm10_v2_chr11_+_98863610_98863646	0.0894906	UGCAUAG	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr11_-_5261558_5261637	0.0889279	UGCAUAG	ENSMUST00000020662.8|Kremen1|ENSMUSG00000020393.10|kringle containing transmembrane protein 1
mm10_v2_chr14_-_65262391_65262490	0.0880069	UGCAUAG	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr9_-_42124276_42124333	0.0864991	UGCAUAG	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr15_-_58214882_58214926	0.0863176	UGCAUAG	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr8_+_14095849_14095915	0.0856343	UGCAUAG	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chrX_+_18162575_18162657	0.085564	UGCAUAG	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr10_-_85127977_85128035	0.085417	UGCAUAG	ENSMUST00000050813.2|Mterfd3|ENSMUSG00000049038.2|MTERF domain containing 3
mm10_v2_chr14_-_103099499_103099554	0.0844249	UGCAUAG	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr9_-_42944479_42944510	0.0843823	UGCAUAG	ENSMUST00000114865.1|Grik4|ENSMUSG00000032017.8|glutamate receptor, ionotropic, kainate 4
mm10_v2_chr11_+_31872100_31872226	0.0835902	UGCAUAG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr3_+_97658212_97658339	0.0831305	UGCAUAG	ENSMUST00000045743.6|Prkab2|ENSMUSG00000038205.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
mm10_v2_chr13_-_101768154_101768217	0.0830508	UGCAUAG	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr12_+_71015966_71016063	0.0815389	UGCAUAG	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr1_+_105990384_105990498	0.0812845	UGCAUAG	ENSMUST00000119166.1|Zcchc2|ENSMUSG00000038866.9|zinc finger, CCHC domain containing 2
mm10_v2_chr13_-_103334429_103334500	0.080251	UGCAUAG	ENSMUST00000167058.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000164111.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr10_-_5922385_5922407	0.0800474	UGCAUAG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr4_-_128962420_128962449	0.0794554	UGCAUAG	ENSMUST00000119354.1|Adc|ENSMUSG00000028789.10|arginine decarboxylase 	ENSMUST00000106068.1|Adc|ENSMUSG00000028789.10|arginine decarboxylase 	ENSMUST00000030581.3|Adc|ENSMUSG00000028789.10|arginine decarboxylase
mm10_v2_chr11_-_30268169_30268191	0.0781234	UGCAUAG	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr8_-_60983215_60983319	0.0778413	UGCAUAG	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr11_+_102041509_102041531	0.0776995	UGCAUAG	ENSMUST00000123895.1|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000017453.5|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107163.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107164.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G
mm10_v2_chr16_-_67620880_67620922	0.0770769	UGCAUAG	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr10_-_86498836_86498858	0.0761039	UGCAUAG	ENSMUST00000120638.1|Syn3|ENSMUSG00000059602.8|synapsin III
mm10_v2_chr16_-_97962581_97962636	0.0759058	UGCAUAG	ENSMUST00000113734.2|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000052089.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000063605.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21
mm10_v2_chr8_-_109737714_109737786	0.0756157	UGCAUAG	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr5_+_119670825_119670862	0.0755446	UGCAUAG	ENSMUST00000121021.1|Tbx3|ENSMUSG00000018604.12|T-box 3
mm10_v2_chr3_-_108146080_108146150	0.07523	UGCAUAG	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr1_-_133753681_133753857	0.0751815	UGCAUAG	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr12_-_85339346_85339391	0.0750056	UGCAUAG	ENSMUST00000040992.7|Nek9|ENSMUSG00000034290.9|NIMA (never in mitosis gene a)-related expressed kinase 9
mm10_v2_chr8_-_25785154_25785215	0.074845	UGCAUAG	ENSMUST00000038498.8|Bag4|ENSMUSG00000037316.8|BCL2-associated athanogene 4
mm10_v2_chr4_-_151996113_151996258	0.0748223	UGCAUAG	ENSMUST00000055688.9|Phf13|ENSMUSG00000047777.9|PHD finger protein 13
mm10_v2_chr5_+_77265454_77265549	0.0729365	UGCAUAG	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr6_-_127151044_127151055	0.0727239	UGCAUAG	ENSMUST00000000188.8|Ccnd2|ENSMUSG00000000184.9|cyclin D2
mm10_v2_chr18_+_44380479_44380554	0.0705807	UGCAUAG	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr2_+_153345809_153345889	0.0702455	UGCAUAG	ENSMUST00000109790.1|Asxl1|ENSMUSG00000042548.7|additional sex combs like 1
mm10_v2_chr9_-_21592805_21592846	0.0700622	UGCAUAG	ENSMUST00000034700.7|Yipf2|ENSMUSG00000032182.8|Yip1 domain family, member 2 	ENSMUST00000180365.1|Yipf2|ENSMUSG00000032182.8|Yip1 domain family, member 2 	ENSMUST00000078572.7|Yipf2|ENSMUSG00000032182.8|Yip1 domain family, member 2
mm10_v2_chr5_+_64803513_64803530	0.0697353	UGCAUAG	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr11_+_97415527_97415538	0.0697161	UGCAUAG	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr8_-_8660773_8660773	0.0675831	UGCAUAG	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr12_+_16894894_16894978	0.0675563	UGCAUAG	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr1_-_173367638_173367695	0.0672154	UGCAUAG	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr5_-_143180721_143180795	0.0663149	UGCAUAG	ENSMUST00000164068.1|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor 	ENSMUST00000049861.4|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor 	ENSMUST00000165318.1|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor
mm10_v2_chr9_-_54560138_54560225	0.06625	UGCAUAG	ENSMUST00000041901.6|Cib2|ENSMUSG00000037493.6|calcium and integrin binding family member 2
mm10_v2_chr1_-_64121456_64121491	0.0652754	UGCAUAG	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr3_-_56183678_56183701	0.0651373	UGCAUAG	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr10_-_119240006_119240092	0.0649457	UGCAUAG	ENSMUST00000020315.6|Cand1|ENSMUSG00000020114.6|cullin associated and neddylation disassociated 1
mm10_v2_chr3_+_141465564_141465574	0.0648054	UGCAUAG	ENSMUST00000106236.2|Unc5c|ENSMUSG00000059921.9|unc-5 homolog C (C. elegans) 	ENSMUST00000075282.3|Unc5c|ENSMUSG00000059921.9|unc-5 homolog C (C. elegans)
mm10_v2_chr9_-_82975475_82975493	0.0643558	UGCAUAG	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr4_-_120747248_120747404	0.06421	UGCAUAG	ENSMUST00000030376.7|Kcnq4|ENSMUSG00000028631.7|potassium voltage-gated channel, subfamily Q, member 4
mm10_v2_chr16_+_42907563_42907684	0.0635818	UGCAUAG	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr10_+_62980233_62980262	0.0631143	UGCAUAG	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr1_-_93478785_93478823	0.0623361	UGCAUAG	ENSMUST00000170883.1|Hdlbp|ENSMUSG00000034088.9|high density lipoprotein (HDL) binding protein
mm10_v2_chr11_-_46312220_46312358	0.0618278	UGCAUAG	ENSMUST00000129474.1|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000093166.4|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000165599.2|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2
mm10_v2_chr3_+_8509477_8509550	0.0617136	UGCAUAG	ENSMUST00000029002.7|Stmn2|ENSMUSG00000027500.9|stathmin-like 2
mm10_v2_chr9_-_31211805_31211824	0.0616726	UGCAUAG	ENSMUST00000072634.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2 	ENSMUST00000079758.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2
mm10_v2_chr10_+_58446845_58446928	0.0598242	UGCAUAG	ENSMUST00000003310.5|Ranbp2|ENSMUSG00000003226.6|RAN binding protein 2
mm10_v2_chr17_-_87797994_87798049	0.0586656	UGCAUAG	ENSMUST00000055221.7|Kcnk12|ENSMUSG00000050138.7|potassium channel, subfamily K, member 12
mm10_v2_chr6_-_126645784_126645801	0.0581329	UGCAUAG	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr5_-_143269958_143270022	0.0568072	UGCAUAG	ENSMUST00000161448.1|Zfp316|ENSMUSG00000046658.10|zinc finger protein 316
mm10_v2_chr2_-_37443096_37443178	0.0563298	UGCAUAG	ENSMUST00000102789.2|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000067043.4|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000112932.1|Zbtb6|ENSMUSG00000066798.3|zinc finger and BTB domain containing 6
mm10_v2_chr11_+_29692937_29692997	0.0560882	UGCAUAG	ENSMUST00000102843.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000102842.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000078830.4|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000170731.1|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr2_+_136713444_136713492	0.0555841	UGCAUAG	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr1_-_43827751_43827800	0.0552938	UGCAUAG	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr8_+_79639618_79639730	0.054468	UGCAUAG	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr14_-_105896819_105896819	0.0540706	UGCAUAG	ENSMUST00000022709.4|Spry2|ENSMUSG00000022114.4|sprouty homolog 2 (Drosophila)
mm10_v2_chr10_-_115384388_115384435	0.0538965	UGCAUAG	ENSMUST00000020346.4|Thap2|ENSMUSG00000020137.4|THAP domain containing, apoptosis associated protein 2
mm10_v2_chr11_-_86757483_86757572	0.0533384	UGCAUAG	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr3_+_31902666_31902703	0.0530993	UGCAUAG	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr6_+_108213086_108213123	0.051558	UGCAUAG	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr8_+_35587780_35587825	0.0510759	UGCAUAG	ENSMUST00000037666.5|Mfhas1|ENSMUSG00000070056.5|malignant fibrous histiocytoma amplified sequence 1
mm10_v2_chr2_+_106693185_106693278	0.0504704	UGCAUAG	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr1_+_63445842_63445943	0.050377	UGCAUAG	ENSMUST00000087374.3|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000114107.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000182642.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23
mm10_v2_chr11_+_85311232_85311286	0.0484488	UGCAUAG	ENSMUST00000020835.9|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr7_+_80993658_80993698	0.0479528	UGCAUAG	ENSMUST00000107353.2|Zfp592|ENSMUSG00000005621.11|zinc finger protein 592
mm10_v2_chr10_+_44268328_44268379	0.0478957	UGCAUAG	ENSMUST00000039286.4|Atg5|ENSMUSG00000038160.6|autophagy related 5
mm10_v2_chr9_-_32541589_32541602	0.0471865	UGCAUAG	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr16_+_27388869_27388980	0.0470803	UGCAUAG	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr2_-_153529941_153529985	0.0467813	UGCAUAG	ENSMUST00000035346.7|8430427H17Rik|ENSMUSG00000061411.6|RIKEN cDNA 8430427H17 gene
mm10_v2_chr5_-_110448486_110448519	0.0463126	UGCAUAG	ENSMUST00000069483.5|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr13_-_85288999_85289058	0.0463078	UGCAUAG	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr6_+_95117740_95117880	0.0460388	UGCAUAG	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chrX_-_13846508_13846591	0.0453572	UGCAUAG	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr18_+_61555258_61555290	0.0452771	UGCAUAG	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr13_+_41606216_41606216	0.0444319	UGCAUAG	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr1_-_134955908_134955955	0.0441905	UGCAUAG	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr12_-_75177325_75177359	0.0436003	UGCAUAG	ENSMUST00000042299.2|Kcnh5|ENSMUSG00000034402.2|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm10_v2_chr1_-_135585314_135585364	0.0432312	UGCAUAG	ENSMUST00000040599.8|Nav1|ENSMUSG00000009418.9|neuron navigator 1 	ENSMUST00000067414.6|Nav1|ENSMUSG00000009418.9|neuron navigator 1
mm10_v2_chr8_+_106059562_106059623	0.0427242	UGCAUAG	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr1_+_23761926_23761999	0.0409558	UGCAUAG	ENSMUST00000063663.5|B3gat2|ENSMUSG00000026156.8|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm10_v2_chr16_+_20589471_20589582	0.0395672	UGCAUAG	ENSMUST00000100074.3|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2 	ENSMUST00000096197.4|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2
mm10_v2_chrX_-_141725181_141725263	0.0392219	UGCAUAG	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr6_+_145211134_145211222	0.0391382	UGCAUAG	ENSMUST00000111725.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111726.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000039729.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111723.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111724.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111721.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111719.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5
mm10_v2_chr15_-_53346118_53346169	0.03784	UGCAUAG	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr10_+_108162358_108162408	0.0377672	UGCAUAG	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr15_-_103239812_103239888	0.0370988	UGCAUAG	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr1_-_170867761_170867784	0.0367957	UGCAUAG	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr5_-_67427794_67427813	0.0362659	UGCAUAG	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr11_-_88718223_88718294	0.0361913	UGCAUAG	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr5_+_34573664_34573737	0.0355594	UGCAUAG	ENSMUST00000114338.2|Add1|ENSMUSG00000029106.8|adducin 1 (alpha)
mm10_v2_chr5_-_144965793_144965877	0.0343782	UGCAUAG	ENSMUST00000110677.1|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000085684.4|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000100461.2|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1
mm10_v2_chr6_+_115134899_115134982	0.0338525	UGCAUAG	ENSMUST00000009538.5|Syn2|ENSMUSG00000009394.7|synapsin II 	ENSMUST00000169345.1|Syn2|ENSMUSG00000009394.7|synapsin II
mm10_v2_chr14_-_121797670_121797753	0.0325482	UGCAUAG	ENSMUST00000100299.3|Dock9|ENSMUSG00000025558.9|dedicator of cytokinesis 9
mm10_v2_chr5_-_69592311_69592337	0.0323839	UGCAUAG	ENSMUST00000031117.6|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr2_-_65567465_65567495	0.0321038	UGCAUAG	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr15_+_101174096_101174148	0.032026	UGCAUAG	ENSMUST00000000544.9|Acvr1b|ENSMUSG00000000532.9|activin A receptor, type 1B
mm10_v2_chr9_-_108190352_108190420	0.0319454	UGCAUAG	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr19_-_59943647_59943678	0.0314053	UGCAUAG	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr11_-_50325599_50325673	0.0305109	UGCAUAG	ENSMUST00000179865.1|Canx|ENSMUSG00000020368.9|calnexin 	ENSMUST00000020637.8|Canx|ENSMUSG00000020368.9|calnexin
mm10_v2_chr3_+_41555723_41555745	0.0303515	UGCAUAG	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr10_+_84917616_84917656	0.0295725	UGCAUAG	ENSMUST00000038523.7|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) 	ENSMUST00000095385.3|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
mm10_v2_chr10_-_80102653_80102728	0.0284123	UGCAUAG	ENSMUST00000042771.7|Sbno2|ENSMUSG00000035673.9|strawberry notch homolog 2 (Drosophila)
mm10_v2_chr15_-_50889691_50889714	0.0276282	UGCAUAG	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr1_+_132477361_132477412	0.0268002	UGCAUAG	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr4_+_31964081_31964263	0.026484	UGCAUAG	ENSMUST00000037607.4|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000080933.6|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108183.1|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108184.2|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7
mm10_v2_chr13_-_105054895_105054930	0.0262386	UGCAUAG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr18_-_21300129_21300168	0.0259786	UGCAUAG	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr11_+_51763682_51763749	0.0259177	UGCAUAG	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr1_+_89070406_89070421	0.0258234	UGCAUAG	ENSMUST00000066279.4|Sh3bp4|ENSMUSG00000036206.6|SH3-domain binding protein 4
mm10_v2_chr16_+_37539883_37539918	0.0256486	UGCAUAG	ENSMUST00000023524.6|Rabl3|ENSMUSG00000022827.8|RAB, member of RAS oncogene family-like 3
mm10_v2_chr7_-_138397704_138397786	0.0255439	UGCAUAG	ENSMUST00000160436.1|Tcerg1l|ENSMUSG00000091002.2|transcription elongation regulator 1-like
mm10_v2_chr4_-_155222535_155222592	0.0248404	UGCAUAG	ENSMUST00000084103.3|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian) 	ENSMUST00000030917.5|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian)
mm10_v2_chr19_+_3767397_3767523	0.0248297	UGCAUAG	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr16_+_56075399_56075492	0.0242172	UGCAUAG	ENSMUST00000089362.2|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000089360.3|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000049128.6|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7
mm10_v2_chr9_+_70678950_70679010	0.0237683	UGCAUAG	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr10_-_117148474_117148510	0.0227853	UGCAUAG	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr6_-_13608011_13608100	0.0226076	UGCAUAG	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr2_+_3284202_3284220	0.0224565	UGCAUAG	ENSMUST00000081932.6|Nmt2|ENSMUSG00000026643.10|N-myristoyltransferase 2
mm10_v2_chr11_+_95712673_95712673	0.0211337	UGCAUAG	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr3_+_61364507_61364633	0.0210665	UGCAUAG	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr4_+_53440516_53440684	0.0201398	UGCAUAG	ENSMUST00000107651.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107647.1|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr5_-_41844168_41844329	0.0198703	UGCAUAG	ENSMUST00000050556.7|Bod1l|ENSMUSG00000061755.7|biorientation of chromosomes in cell division 1-like
mm10_v2_chr16_-_21694570_21694665	0.0197947	UGCAUAG	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr3_-_142881942_142882017	0.0196349	UGCAUAG	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr16_-_50432340_50432409	0.0190137	UGCAUAG	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr2_-_63184253_63184292	0.0188034	UGCAUAG	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr10_+_7681197_7681225	0.0175474	UGCAUAG	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr2_+_32535315_32535359	0.017249	UGCAUAG	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr8_+_117257019_117257107	0.0166884	UGCAUAG	ENSMUST00000166750.1|Cmip|ENSMUSG00000034390.9|c-Maf inducing protein
mm10_v2_chr16_-_11134624_11134659	0.0166592	UGCAUAG	ENSMUST00000038424.7|Txndc11|ENSMUSG00000022498.10|thioredoxin domain containing 11
mm10_v2_chr13_-_24280716_24280795	0.0160753	UGCAUAG	ENSMUST00000110398.2|Lrrc16a|ENSMUSG00000021338.11|leucine rich repeat containing 16A 	ENSMUST00000072889.5|Lrrc16a|ENSMUSG00000021338.11|leucine rich repeat containing 16A
mm10_v2_chr17_+_43801823_43801863	0.0159467	UGCAUAG	ENSMUST00000044895.5|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr12_-_59219725_59219776	0.0152627	UGCAUAG	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr11_-_59228162_59228270	0.0150274	UGCAUAG	ENSMUST00000163300.1|Arf1|ENSMUSG00000048076.8|ADP-ribosylation factor 1 	ENSMUST00000061242.7|Arf1|ENSMUSG00000048076.8|ADP-ribosylation factor 1
mm10_v2_chr8_+_13159135_13159168	0.0145597	UGCAUAG	ENSMUST00000033824.6|Lamp1|ENSMUSG00000031447.6|lysosomal-associated membrane protein 1
mm10_v2_chr18_-_10181792_10181792	0.013906	UGCAUAG	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr10_-_42276744_42276763	0.0131024	UGCAUAG	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr2_-_52676571_52676588	0.0125745	UGCAUAG	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr18_-_31447383_31447415	0.0123161	UGCAUAG	ENSMUST00000025110.3|Syt4|ENSMUSG00000024261.5|synaptotagmin IV
mm10_v2_chr2_-_120609283_120609317	0.0121481	UGCAUAG	ENSMUST00000102496.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr2_-_73312701_73312724	0.0103669	UGCAUAG	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr11_-_107131922_107131954	0.00900385	UGCAUAG	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr9_-_57467985_57468074	0.00851488	UGCAUAG	ENSMUST00000046587.6|Scamp5|ENSMUSG00000040722.6|secretory carrier membrane protein 5
mm10_v2_chr16_+_93832121_93832308	0.00832877	UGCAUAG	ENSMUST00000044068.6|Morc3|ENSMUSG00000039456.6|microrchidia 3
mm10_v2_chr18_-_46525940_46525999	0.00809074	UGCAUAG	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr17_-_12318660_12318684	0.00771362	UGCAUAG	ENSMUST00000089058.5|Map3k4|ENSMUSG00000014426.8|mitogen-activated protein kinase kinase kinase 4
mm10_v2_chr7_+_110018301_110018425	0.00745347	UGCAUAG	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr6_-_32588192_32588213	0.00734875	UGCAUAG	ENSMUST00000115096.2|Plxna4|ENSMUSG00000029765.10|plexin A4
mm10_v2_chr16_+_33380765_33380787	0.00725656	UGCAUAG	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr13_+_13954614_13954691	0.00703134	UGCAUAG	ENSMUST00000099747.3|B3galnt2|ENSMUSG00000039242.9|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm10_v2_chr8_-_105484350_105484350	0.00658275	UGCAUAG	ENSMUST00000044286.5|Zdhhc1|ENSMUSG00000039199.5|zinc finger, DHHC domain containing 1
mm10_v2_chr6_+_100704709_100704742	0.00643541	UGCAUAG	ENSMUST00000032157.7|Gxylt2|ENSMUSG00000030074.8|glucoside xylosyltransferase 2
mm10_v2_chr8_+_56551090_56551143	0.00496157	UGCAUAG	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr14_-_26971232_26971232	0.00494121	UGCAUAG	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr11_+_94327984_94328029	0.00493331	UGCAUAG	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr15_-_38519227_38519271	0.00451886	UGCAUAG	ENSMUST00000110328.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000110329.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000065308.5|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1
mm10_v2_chr5_+_107497718_107497759	0.00436979	UGCAUAG	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr3_-_104818224_104818242	0.00316373	UGCAUAG	ENSMUST00000002297.5|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10
mm10_v2_chr12_-_80436571_80436603	0.00270037	UGCAUAG	ENSMUST00000054145.6|Dcaf5|ENSMUSG00000049106.6|DDB1 and CUL4 associated factor 5
mm10_v2_chr1_-_54194048_54194048	0.00235175	UGCAUAG	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr12_+_78226627_78226655	0.00143011	UGCAUAG	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr2_-_33468493_33468572	0.000890404	UGCAUAG	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr18_-_33463615_33463634	0.000563386	UGCAUAG	ENSMUST00000051087.8|Nrep|ENSMUSG00000042834.8|neuronal regeneration related protein
mm10_v2_chr7_-_28962265_28962340	0.000510444	UGCAUAG	ENSMUST00000068045.7|Actn4|ENSMUSG00000054808.7|actinin alpha 4
