ISMARA results: Irx4

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2D miR_HR1_12

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Results for Irx4

Z-value: 0.19

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Transcription factors associated with Irx4

Gene Symbol	Gene ID	Gene Info
Irx4 Ensembl NCBI MGI UniProt	ENSMUSG00000021604.9	Iroquois homeobox 4

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Irx4	mm10_v2_chr13_+_73260473_73260497	0.25	4.3e-01	Click!

Activity profile of Irx4 motif

Sorted Z-values of Irx4 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr16_+_17146937 Show fit	0.28	ENSMUST00000115706.1 ENSMUST00000069064.4	Ydjc Ensembl NCBI MGI UniProt Show fit	YdjC homolog (bacterial)
chr11_-_11970540 Show fit	0.14	ENSMUST00000109653.1	Grb10 Ensembl NCBI MGI UniProt Show fit	growth factor receptor bound protein 10
chr6_-_83317589 Show fit	0.12	ENSMUST00000005810.6	Mthfd2 Ensembl NCBI MGI UniProt Show fit	methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
chr4_+_48663502 Show fit	0.10	ENSMUST00000030033.4	Murc Ensembl NCBI MGI UniProt Show fit	muscle-related coiled-coil protein
chr15_-_35938009 Show fit	0.09	ENSMUST00000156915.1	Cox6c Ensembl NCBI MGI UniProt Show fit	cytochrome c oxidase subunit VIc
chr2_-_79908428 Show fit	0.09	ENSMUST00000102652.3 ENSMUST00000102651.3	Pde1a Ensembl NCBI MGI UniProt Show fit	phosphodiesterase 1A, calmodulin-dependent
chr8_+_84872105 Show fit	0.08	ENSMUST00000136026.1 ENSMUST00000170296.1	Syce2 Ensembl NCBI MGI UniProt Show fit	synaptonemal complex central element protein 2
chr2_-_79908389 Show fit	0.06	ENSMUST00000090756.4	Pde1a Ensembl NCBI MGI UniProt Show fit	phosphodiesterase 1A, calmodulin-dependent
chr6_-_3494587 Show fit	0.05	ENSMUST00000049985.8	Hepacam2 Ensembl NCBI MGI UniProt Show fit	HEPACAM family member 2
chr1_+_45311538 Show fit	0.05	ENSMUST00000087883.6	Col3a1 Ensembl NCBI MGI UniProt Show fit	collagen, type III, alpha 1

Showing 1 to 10 of 16 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of Irx4

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0045719	negative regulation of glycogen biosynthetic process(GO:0045719)
0.0	0.1	GO:0060414	aorta smooth muscle tissue morphogenesis(GO:0060414)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004487	methylenetetrahydrofolate dehydrogenase (NAD+) activity(GO:0004487)
0.0	0.1	GO:0048101	calmodulin-dependent cyclic-nucleotide phosphodiesterase activity(GO:0004117) calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)

Showing 1 to 2 of 2 entries