Project
2D miR_HR1_12
Navigation
Downloads
Results for Klf6_Patz1
Z-value: 1.83
Motif logo
Transcription factors associated with Klf6_Patz1
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Klf6 | mm10_v2_chr13_+_5861489_5861501 | -0.70 | 1.1e-02 | Click! |
| Patz1 | mm10_v2_chr11_+_3289880_3289993 | -0.69 | 1.2e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr11_-_102296618 Show fit | 6.63 |
ENSMUST00000107132.2
ENSMUST00000073234.2 |
ataxin 7-like 3 |
|
| chr9_+_59578192 Show fit | 3.81 |
ENSMUST00000118549.1
ENSMUST00000034840.3 |
CUGBP, Elav-like family member 6 |
|
| chr7_-_128237984 Show fit | 3.37 |
ENSMUST00000078816.3
|
RIKEN cDNA 9130023H24 gene |
|
| chr13_-_71963713 Show fit | 3.29 |
ENSMUST00000077337.8
|
Iroquois related homeobox 1 (Drosophila) |
|
| chr15_-_32244632 Show fit | 3.11 |
ENSMUST00000181536.1
|
RIKEN cDNA 0610007N19 |
|
| chr15_-_76521902 Show fit | 3.02 |
ENSMUST00000164703.1
ENSMUST00000096365.3 |
scratch homolog 1, zinc finger protein (Drosophila) |
|
| chr4_-_43046196 Show fit | 2.97 |
ENSMUST00000036462.5
|
family with sequence similarity 214, member B |
|
| chr17_+_72836678 Show fit | 2.91 |
ENSMUST00000045174.5
|
yippee-like 5 (Drosophila) |
|
| chr4_+_120854786 Show fit | 2.73 |
ENSMUST00000071093.2
|
regulating synaptic membrane exocytosis 3 |
|
| chr11_-_69122589 Show fit | 2.49 |
ENSMUST00000180487.1
|
RIKEN cDNA 9130213A22 gene |
Network of associatons between targets according to the STRING database.
First level regulatory network of Klf6_Patz1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 5.3 | GO:0042078 | germ-line stem cell division(GO:0042078) male germ-line stem cell asymmetric division(GO:0048133) germline stem cell asymmetric division(GO:0098728) |
| 0.6 | 5.0 | GO:0048625 | myoblast fate commitment(GO:0048625) |
| 1.1 | 4.3 | GO:0072272 | proximal/distal pattern formation involved in metanephric nephron development(GO:0072272) |
| 0.9 | 3.6 | GO:2000820 | negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820) |
| 0.3 | 3.6 | GO:0033689 | negative regulation of osteoblast proliferation(GO:0033689) |
| 0.1 | 3.5 | GO:0009247 | glycolipid biosynthetic process(GO:0009247) |
| 0.2 | 3.3 | GO:0033234 | negative regulation of protein sumoylation(GO:0033234) |
| 0.0 | 3.2 | GO:0090630 | activation of GTPase activity(GO:0090630) |
| 0.1 | 3.1 | GO:0006687 | glycosphingolipid metabolic process(GO:0006687) |
| 0.5 | 3.0 | GO:0070417 | cellular response to cold(GO:0070417) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 15.6 | GO:0005768 | endosome(GO:0005768) |
| 0.4 | 6.1 | GO:0000124 | SAGA complex(GO:0000124) |
| 0.0 | 5.5 | GO:0031225 | anchored component of membrane(GO:0031225) |
| 0.5 | 4.8 | GO:0070369 | beta-catenin-TCF7L2 complex(GO:0070369) |
| 0.1 | 4.5 | GO:0045335 | phagocytic vesicle(GO:0045335) |
| 0.0 | 4.5 | GO:0031227 | intrinsic component of endoplasmic reticulum membrane(GO:0031227) |
| 0.2 | 4.4 | GO:0035102 | PRC1 complex(GO:0035102) |
| 0.4 | 4.2 | GO:0016600 | flotillin complex(GO:0016600) |
| 0.2 | 3.9 | GO:0034706 | sodium channel complex(GO:0034706) |
| 0.1 | 3.9 | GO:0030673 | axolemma(GO:0030673) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 5.6 | GO:0045295 | gamma-catenin binding(GO:0045295) |
| 0.0 | 5.4 | GO:0017124 | SH3 domain binding(GO:0017124) |
| 0.0 | 4.9 | GO:0002020 | protease binding(GO:0002020) |
| 0.1 | 4.6 | GO:0019003 | GDP binding(GO:0019003) |
| 0.0 | 4.4 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
| 0.8 | 4.2 | GO:0008427 | calcium-dependent protein kinase inhibitor activity(GO:0008427) |
| 0.3 | 3.7 | GO:0019855 | calcium channel inhibitor activity(GO:0019855) |
| 0.4 | 3.5 | GO:0030550 | acetylcholine receptor inhibitor activity(GO:0030550) |
| 0.1 | 3.5 | GO:0031489 | myosin V binding(GO:0031489) |
| 1.1 | 3.2 | GO:0035939 | microsatellite binding(GO:0035939) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.9 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
| 0.0 | 5.1 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
| 0.0 | 4.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
| 0.1 | 4.5 | PID TNF PATHWAY | TNF receptor signaling pathway |
| 0.1 | 4.4 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
| 0.1 | 4.3 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
| 0.1 | 4.1 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
| 0.1 | 4.0 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
| 0.1 | 3.8 | PID BMP PATHWAY | BMP receptor signaling |
| 0.1 | 3.5 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.4 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
| 0.1 | 5.0 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
| 0.1 | 4.7 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
| 0.3 | 3.7 | REACTOME ACETYLCHOLINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Acetylcholine Neurotransmitter Release Cycle |
| 0.0 | 3.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
| 0.0 | 3.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
| 0.1 | 3.2 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
| 0.1 | 3.1 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
| 0.1 | 3.1 | REACTOME REGULATION OF BETA CELL DEVELOPMENT | Genes involved in Regulation of beta-cell development |
| 0.1 | 3.0 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |