mm10_v2_chr12_-_119238794_119238863	2.48832	AAAGUGC	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr8_+_35375719_35375766	2.44392	AAAGUGC	ENSMUST00000070481.6|Ppp1r3b|ENSMUSG00000046794.8|protein phosphatase 1, regulatory (inhibitor) subunit 3B
mm10_v2_chr5_+_113735782_113735782	2.3307	AAAGUGC	ENSMUST00000065698.5|Ficd|ENSMUSG00000053334.5|FIC domain containing
mm10_v2_chr12_-_44210061_44210077	2.31011	AAAGUGC	ENSMUST00000015049.3|Dnajb9|ENSMUSG00000014905.3|DnaJ (Hsp40) homolog, subfamily B, member 9
mm10_v2_chr4_-_139092958_139092993	2.20586	AAAGUGC	ENSMUST00000042844.6|Nbl1|ENSMUSG00000041120.6|neuroblastoma, suppression of tumorigenicity 1
mm10_v2_chr8_-_89044162_89044195	2.13145	AAAGUGC	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr6_+_96113146_96113170	2.03953	AAAGUGC	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr12_+_24651346_24651409	1.99759	AAAGUGC	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr13_-_92131494_92131680	1.91869	AAAGUGC	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr4_-_53159885_53159900	1.74537	AAAGUGC	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr15_-_100584075_100584075	1.60411	AAAGUGC	ENSMUST00000184908.1|POU6F1|ENSMUSG00000098598.1|POU domain, class 6, transcription factor 1 (Pou6f1), mRNA
mm10_v2_chr1_-_51478390_51478406	1.58808	AAAGUGC	ENSMUST00000027279.5|Nabp1|ENSMUSG00000026107.5|nucleic acid binding protein 1
mm10_v2_chr17_+_44078813_44078910	1.52171	AAAGUGC	ENSMUST00000154166.1|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5 	ENSMUST00000024756.4|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm10_v2_chr9_-_96889381_96889474	1.49942	AAAGUGC	ENSMUST00000112951.2|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000126411.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000078478.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000119141.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000120101.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2
mm10_v2_chr10_+_34483400_34483445	1.4618	AAAGUGC	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr5_-_8997324_8997324	1.43844	AAAGUGC	ENSMUST00000003720.4|Crot|ENSMUSG00000003623.4|carnitine O-octanoyltransferase
mm10_v2_chr8_+_82863351_82863397	1.43413	AAAGUGC	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr13_-_34345174_34345273	1.35282	AAAGUGC	ENSMUST00000040336.5|Slc22a23|ENSMUSG00000038267.8|solute carrier family 22, member 23
mm10_v2_chr9_-_123851855_123851912	1.34841	AAAGUGC	ENSMUST00000184082.1|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1 	ENSMUST00000167595.2|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1
mm10_v2_chr5_-_65492984_65493051	1.27028	AAAGUGC	ENSMUST00000139122.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr14_+_30715599_30715641	1.26431	AAAGUGC	ENSMUST00000054230.4|Sfmbt1|ENSMUSG00000006527.8|Scm-like with four mbt domains 1
mm10_v2_chr19_+_16956110_16956124	1.24698	AAAGUGC	ENSMUST00000087689.4|Prune2|ENSMUSG00000039126.9|prune homolog 2 (Drosophila)
mm10_v2_chr9_+_121760000_121760061	1.23164	AAAGUGC	ENSMUST00000093772.3|Zfp651|ENSMUSG00000013419.6|zinc finger protein 651
mm10_v2_chr5_+_104459450_104459580	1.22349	AAAGUGC	ENSMUST00000086831.3|Pkd2|ENSMUSG00000034462.9|polycystic kidney disease 2
mm10_v2_chr14_+_45219993_45219993	1.20858	AAAGUGC	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr8_+_14911663_14911742	1.20244	AAAGUGC	ENSMUST00000084207.5|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000161162.1|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000110800.2|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10
mm10_v2_chr15_+_57694651_57694686	1.19292	AAAGUGC	ENSMUST00000096430.4|Zhx2|ENSMUSG00000071757.4|zinc fingers and homeoboxes 2
mm10_v2_chr1_-_190978954_190978998	1.17269	AAAGUGC	ENSMUST00000047409.6|Vash2|ENSMUSG00000037568.6|vasohibin 2
mm10_v2_chr19_+_38836561_38836612	1.14485	AAAGUGC	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr6_-_72617000_72617000	1.13148	AAAGUGC	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr17_+_25188380_25188418	1.09084	AAAGUGC	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr8_+_60632856_60632905	1.08181	AAAGUGC	ENSMUST00000160719.1|Mfap3l|ENSMUSG00000031647.4|microfibrillar-associated protein 3-like
mm10_v2_chr18_+_51117754_51117898	1.06881	AAAGUGC	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr15_-_67113909_67113992	1.05581	AAAGUGC	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr10_-_93311073_93311161	1.04984	AAAGUGC	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr6_-_84593810_84593922	1.03685	AAAGUGC	ENSMUST00000077705.3|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1 	ENSMUST00000168003.2|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1
mm10_v2_chr4_+_138454305_138454327	1.03279	AAAGUGC	ENSMUST00000050918.3|Camk2n1|ENSMUSG00000046447.3|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm10_v2_chr9_-_62537036_62537061	1.03196	AAAGUGC	ENSMUST00000048043.5|Coro2b|ENSMUSG00000041729.9|coronin, actin binding protein, 2B
mm10_v2_chr2_-_167062981_167063048	1.01577	AAAGUGC	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr19_-_34747289_34747313	1.00548	AAAGUGC	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr7_+_75455534_75455629	0.993825	AAAGUGC	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr17_+_43016536_43016591	0.987083	AAAGUGC	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chrX_+_103356464_103356488	0.980715	AAAGUGC	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr18_+_74442500_74442537	0.979102	AAAGUGC	ENSMUST00000074157.6|Myo5b|ENSMUSG00000025885.12|myosin VB
mm10_v2_chr2_+_127247908_127247997	0.977618	AAAGUGC	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr8_-_26119125_26119233	0.965138	AAAGUGC	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr17_+_26933070_26933158	0.962126	AAAGUGC	ENSMUST00000073724.5|Phf1|ENSMUSG00000024193.7|PHD finger protein 1
mm10_v2_chr2_+_84734050_84734107	0.956216	AAAGUGC	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr18_+_38993126_38993186	0.947874	AAAGUGC	ENSMUST00000097593.2|Arhgap26|ENSMUSG00000036452.11|Rho GTPase activating protein 26
mm10_v2_chr11_+_69765899_69765925	0.934513	AAAGUGC	ENSMUST00000108640.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4 	ENSMUST00000108639.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4
mm10_v2_chr8_-_80880479_80880499	0.913087	AAAGUGC	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr15_+_95790831_95790859	0.906325	AAAGUGC	ENSMUST00000071874.6|Ano6|ENSMUSG00000064210.6|anoctamin 6
mm10_v2_chr14_-_72709986_72710027	0.901654	AAAGUGC	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr4_+_134923589_134923593	0.897762	AAAGUGC	ENSMUST00000078084.6|D4Wsu53e|ENSMUSG00000037266.12|DNA segment, Chr 4, Wayne State University 53, expressed
mm10_v2_chr5_-_113993873_113993902	0.887357	AAAGUGC	ENSMUST00000159592.1|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr13_+_12565868_12565883	0.879183	AAAGUGC	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr11_-_106788486_106788532	0.869488	AAAGUGC	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr11_-_40755201_40755311	0.860737	AAAGUGC	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr6_-_41636389_41636409	0.846145	AAAGUGC	ENSMUST00000031902.5|Trpv6|ENSMUSG00000029868.8|transient receptor potential cation channel, subfamily V, member 6
mm10_v2_chr2_+_155381808_155381884	0.844358	AAAGUGC	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr18_+_37655891_37655915	0.835866	AAAGUGC	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr11_-_119040905_119040969	0.818164	AAAGUGC	ENSMUST00000026663.7|Cbx8|ENSMUSG00000025578.9|chromobox 8
mm10_v2_chr5_-_36988922_36988982	0.807913	AAAGUGC	ENSMUST00000166339.1|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human) 	ENSMUST00000043964.6|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human)
mm10_v2_chr10_-_71159676_71159708	0.798484	AAAGUGC	ENSMUST00000014473.5|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila) 	ENSMUST00000143791.1|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila)
mm10_v2_chr18_+_12333953_12334024	0.776488	AAAGUGC	ENSMUST00000092070.6|Lama3|ENSMUSG00000024421.10|laminin, alpha 3
mm10_v2_chr10_-_122047293_122047322	0.768196	AAAGUGC	ENSMUST00000020322.5|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1 	ENSMUST00000081688.6|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1
mm10_v2_chr10_+_19934472_19934526	0.765706	AAAGUGC	ENSMUST00000095806.3|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5 	ENSMUST00000120259.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr4_+_152338619_152338709	0.760218	AAAGUGC	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr3_+_96557950_96557968	0.746806	AAAGUGC	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr8_-_27174623_27174651	0.739856	AAAGUGC	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr8_-_84147858_84147942	0.732278	AAAGUGC	ENSMUST00000117424.2|Cc2d1a|ENSMUSG00000036686.10|coiled-coil and C2 domain containing 1A 	ENSMUST00000040383.8|Cc2d1a|ENSMUSG00000036686.10|coiled-coil and C2 domain containing 1A
mm10_v2_chr17_-_15826521_15826590	0.725538	AAAGUGC	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr11_+_116030304_116030385	0.725103	AAAGUGC	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr11_-_86993682_86993707	0.724576	AAAGUGC	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr19_+_7494033_7494068	0.722698	AAAGUGC	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr11_-_100939357_100939456	0.719325	AAAGUGC	ENSMUST00000092671.5|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3 	ENSMUST00000103114.1|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3
mm10_v2_chr12_+_80790532_80790574	0.713556	AAAGUGC	ENSMUST00000068519.5|4933426M11Rik|ENSMUSG00000021133.8|RIKEN cDNA 4933426M11 gene
mm10_v2_chr6_+_54326955_54327012	0.711533	AAAGUGC	ENSMUST00000059138.4|Prr15|ENSMUSG00000045725.4|proline rich 15
mm10_v2_chr1_-_88702121_88702221	0.710639	AAAGUGC	ENSMUST00000159814.1|Arl4c|ENSMUSG00000049866.6|ADP-ribosylation factor-like 4C
mm10_v2_chr12_-_110978981_110979040	0.709039	AAAGUGC	ENSMUST00000135131.1|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9 	ENSMUST00000043459.6|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9 	ENSMUST00000128353.1|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9
mm10_v2_chr11_-_98587193_98587368	0.706518	AAAGUGC	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr1_-_45925570_45925594	0.70447	AAAGUGC	ENSMUST00000027137.4|Slc40a1|ENSMUSG00000025993.4|solute carrier family 40 (iron-regulated transporter), member 1
mm10_v2_chr10_+_42678890_42678948	0.702439	AAAGUGC	ENSMUST00000040718.5|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr3_-_57847478_57847610	0.690628	AAAGUGC	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr2_-_92434027_92434053	0.68825	AAAGUGC	ENSMUST00000111278.1|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like) 	ENSMUST00000090559.5|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like)
mm10_v2_chr4_-_135433744_135433869	0.68665	AAAGUGC	ENSMUST00000156635.1|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3 	ENSMUST00000030606.7|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3
mm10_v2_chr16_+_8830093_8830104	0.682358	AAAGUGC	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr9_-_64022043_64022066	0.668921	AAAGUGC	ENSMUST00000041029.5|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr5_-_67427794_67427813	0.666416	AAAGUGC	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr2_+_173659760_173659816	0.656493	AAAGUGC	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr16_-_3872378_3872411	0.645063	AAAGUGC	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr11_-_40692666_40692774	0.640122	AAAGUGC	ENSMUST00000040167.4|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr4_-_87230435_87230477	0.638596	AAAGUGC	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr19_-_3575708_3575756	0.633117	AAAGUGC	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr3_-_59344256_59344367	0.624606	AAAGUGC	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr12_-_101913116_101913267	0.619326	AAAGUGC	ENSMUST00000177536.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000176728.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000021605.7|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11
mm10_v2_chr6_+_36388055_36388084	0.618934	AAAGUGC	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr6_+_118066356_118066410	0.612651	AAAGUGC	ENSMUST00000164960.1|Rasgef1a|ENSMUSG00000030134.9|RasGEF domain family, member 1A
mm10_v2_chr11_-_71019233_71019303	0.607493	AAAGUGC	ENSMUST00000108523.3|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2 	ENSMUST00000143850.1|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2
mm10_v2_chr4_-_129227883_129227923	0.605184	AAAGUGC	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr1_-_126830632_126830778	0.602898	AAAGUGC	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr11_+_98836775_98836831	0.586792	AAAGUGC	ENSMUST00000107479.2|Rapgefl1|ENSMUSG00000038020.5|Rap guanine nucleotide exchange factor (GEF)-like 1
mm10_v2_chr9_+_107563246_107563285	0.584966	AAAGUGC	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chr6_+_92091378_92091390	0.584756	AAAGUGC	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr5_-_36484112_36484302	0.581374	AAAGUGC	ENSMUST00000119916.1|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B 	ENSMUST00000031097.7|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B
mm10_v2_chr12_-_12941827_12941914	0.577107	AAAGUGC	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr9_+_57560934_57560989	0.568652	AAAGUGC	ENSMUST00000045791.9|Scamp2|ENSMUSG00000040188.9|secretory carrier membrane protein 2
mm10_v2_chr11_+_117654798_117654824	0.565458	AAAGUGC	ENSMUST00000106344.1|Tnrc6c|ENSMUSG00000025571.7|trinucleotide repeat containing 6C
mm10_v2_chr12_+_81631369_81631394	0.56437	AAAGUGC	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr9_-_96631487_96631617	0.562673	AAAGUGC	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr4_-_3938354_3938401	0.559716	AAAGUGC	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr2_+_152293828_152293861	0.558771	AAAGUGC	ENSMUST00000028963.7|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20 	ENSMUST00000144252.1|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20
mm10_v2_chr8_+_91070052_91070123	0.556065	AAAGUGC	ENSMUST00000034091.7|Rbl2|ENSMUSG00000031666.8|retinoblastoma-like 2
mm10_v2_chr9_-_116175318_116175363	0.553315	AAAGUGC	ENSMUST00000061101.4|Tgfbr2|ENSMUSG00000032440.6|transforming growth factor, beta receptor II 	ENSMUST00000035014.6|Tgfbr2|ENSMUSG00000032440.6|transforming growth factor, beta receptor II
mm10_v2_chr15_+_89059712_89059760	0.550558	AAAGUGC	ENSMUST00000161372.1|Panx2|ENSMUSG00000058441.7|pannexin 2 	ENSMUST00000162424.1|Panx2|ENSMUSG00000058441.7|pannexin 2
mm10_v2_chr8_-_85840877_85840957	0.548481	AAAGUGC	ENSMUST00000034140.7|Itfg1|ENSMUSG00000031703.7|integrin alpha FG-GAP repeat containing 1
mm10_v2_chr7_-_130519465_130519558	0.542652	AAAGUGC	ENSMUST00000035458.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1 	ENSMUST00000033139.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1
mm10_v2_chr8_+_106935720_106935776	0.534379	AAAGUGC	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr2_+_23068168_23068241	0.533961	AAAGUGC	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr10_-_8886033_8886076	0.53163	AAAGUGC	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr17_+_24549950_24550062	0.53022	AAAGUGC	ENSMUST00000035565.3|Pkd1|ENSMUSG00000032855.5|polycystic kidney disease 1 homolog
mm10_v2_chr10_+_70245083_70245140	0.529117	AAAGUGC	ENSMUST00000046807.6|Slc16a9|ENSMUSG00000037762.6|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm10_v2_chr11_-_101119814_101119849	0.527817	AAAGUGC	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
mm10_v2_chr5_-_137684665_137684729	0.526044	AAAGUGC	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chr11_-_50292302_50292363	0.523092	AAAGUGC	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr12_+_84114321_84114391	0.521117	AAAGUGC	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr8_-_25016743_25016877	0.514802	AAAGUGC	ENSMUST00000084032.5|Adam9|ENSMUSG00000031555.7|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm10_v2_chr1_+_191906743_191906767	0.512951	AAAGUGC	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr9_+_59750876_59750918	0.512007	AAAGUGC	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr1_+_59912972_59913027	0.510941	AAAGUGC	ENSMUST00000036540.5|Fam117b|ENSMUSG00000041040.6|family with sequence similarity 117, member B
mm10_v2_chr8_+_3393018_3393073	0.509957	AAAGUGC	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr6_+_91978851_91978913	0.505241	AAAGUGC	ENSMUST00000089334.2|Fgd5|ENSMUSG00000034037.8|FYVE, RhoGEF and PH domain containing 5
mm10_v2_chr17_+_26715644_26715724	0.503516	AAAGUGC	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr19_-_47464406_47464450	0.501642	AAAGUGC	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chrX_-_78583882_78583901	0.498681	AAAGUGC	ENSMUST00000114025.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000134602.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000114024.2|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1
mm10_v2_chr11_+_4236411_4236433	0.490254	AAAGUGC	ENSMUST00000075221.2|Osm|ENSMUSG00000058755.3|oncostatin M
mm10_v2_chr18_+_32163073_32163115	0.487773	AAAGUGC	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr2_+_59612034_59612109	0.487076	AAAGUGC	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chr2_+_79635352_79635410	0.486342	AAAGUGC	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr1_-_58586191_58586323	0.484956	AAAGUGC	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr14_-_66868572_66868688	0.477759	AAAGUGC	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr14_+_27039001_27039050	0.474832	AAAGUGC	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr3_+_87617541_87617613	0.473915	AAAGUGC	ENSMUST00000039476.8|Arhgef11|ENSMUSG00000041977.11|Rho guanine nucleotide exchange factor (GEF) 11 	ENSMUST00000129113.1|Arhgef11|ENSMUSG00000041977.11|Rho guanine nucleotide exchange factor (GEF) 11
mm10_v2_chr9_+_57940104_57940120	0.47272	AAAGUGC	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr2_+_180042496_180042562	0.46862	AAAGUGC	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr14_+_14703025_14703073	0.463932	AAAGUGC	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr5_+_119670825_119670862	0.460315	AAAGUGC	ENSMUST00000121021.1|Tbx3|ENSMUSG00000018604.12|T-box 3
mm10_v2_chr5_+_8422831_8422906	0.454383	AAAGUGC	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr5_+_17574268_17574293	0.454078	AAAGUGC	ENSMUST00000030568.7|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr9_-_63146980_63147011	0.4539	AAAGUGC	ENSMUST00000055281.7|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1 	ENSMUST00000119146.1|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1
mm10_v2_chr6_-_13677930_13677974	0.449668	AAAGUGC	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr1_+_178319130_178319171	0.448868	AAAGUGC	ENSMUST00000027781.6|Cox20|ENSMUSG00000026500.6|COX20 Cox2 chaperone
mm10_v2_chr10_-_128696257_128696273	0.44371	AAAGUGC	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr3_+_28781305_28781344	0.443639	AAAGUGC	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr3_+_57736056_57736128	0.442334	AAAGUGC	ENSMUST00000041826.9|Rnf13|ENSMUSG00000036503.9|ring finger protein 13
mm10_v2_chr7_-_105633525_105633601	0.436149	AAAGUGC	ENSMUST00000153371.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000106789.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000057525.7|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3
mm10_v2_chr1_+_172148015_172148048	0.435714	AAAGUGC	ENSMUST00000074144.5|Dcaf8|ENSMUSG00000026554.10|DDB1 and CUL4 associated factor 8
mm10_v2_chr18_+_61555258_61555290	0.435143	AAAGUGC	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr15_-_31367527_31367759	0.434667	AAAGUGC	ENSMUST00000076942.4|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000123325.1|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000110410.2|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B
mm10_v2_chr2_-_170131156_170131220	0.430703	AAAGUGC	ENSMUST00000063710.6|Zfp217|ENSMUSG00000052056.8|zinc finger protein 217
mm10_v2_chr2_+_165992625_165992667	0.430261	AAAGUGC	ENSMUST00000109252.1|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3 	ENSMUST00000088095.5|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3
mm10_v2_chr1_-_161876656_161876682	0.427917	AAAGUGC	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr3_+_103914560_103914605	0.426459	AAAGUGC	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr6_+_122308684_122308720	0.41988	AAAGUGC	ENSMUST00000007602.8|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent 	ENSMUST00000112610.1|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent
mm10_v2_chr16_-_91597636_91597800	0.417352	AAAGUGC	ENSMUST00000023686.8|Tmem50b|ENSMUSG00000022964.8|transmembrane protein 50B
mm10_v2_chr11_-_59964936_59964951	0.413638	AAAGUGC	ENSMUST00000062405.7|Rasd1|ENSMUSG00000049892.7|RAS, dexamethasone-induced 1
mm10_v2_chr5_-_110810080_110810113	0.410672	AAAGUGC	ENSMUST00000031490.6|Ulk1|ENSMUSG00000029512.7|unc-51 like kinase 1
mm10_v2_chr2_+_71981184_71981287	0.409895	AAAGUGC	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr7_-_113369326_113369395	0.409272	AAAGUGC	ENSMUST00000047091.7|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10 	ENSMUST00000119278.1|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10
mm10_v2_chr2_+_79255500_79255552	0.405772	AAAGUGC	ENSMUST00000099972.4|Itga4|ENSMUSG00000027009.12|integrin alpha 4
mm10_v2_chr6_+_116338013_116338083	0.403282	AAAGUGC	ENSMUST00000079012.6|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8 	ENSMUST00000101032.3|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8
mm10_v2_chr19_+_46152505_46152514	0.4028	AAAGUGC	ENSMUST00000026254.7|Gbf1|ENSMUSG00000025224.8|golgi-specific brefeldin A-resistance factor 1
mm10_v2_chr12_+_8921598_8921671	0.402282	AAAGUGC	ENSMUST00000020909.3|Laptm4a|ENSMUSG00000020585.4|lysosomal-associated protein transmembrane 4A
mm10_v2_chr2_+_19658055_19658072	0.401175	AAAGUGC	ENSMUST00000052168.4|Otud1|ENSMUSG00000043415.4|OTU domain containing 1
mm10_v2_chr18_+_75367529_75367561	0.401136	AAAGUGC	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr6_-_90810118_90810160	0.400901	AAAGUGC	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr5_+_77265454_77265549	0.400214	AAAGUGC	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr14_-_65262391_65262490	0.399451	AAAGUGC	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr9_-_42124276_42124333	0.393744	AAAGUGC	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr19_+_6241668_6241694	0.3937	AAAGUGC	ENSMUST00000045351.6|Atg2a|ENSMUSG00000024773.8|autophagy related 2A
mm10_v2_chr10_+_80148263_80148279	0.392973	AAAGUGC	ENSMUST00000099492.3|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000042057.5|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr2_+_118901428_118901488	0.390612	AAAGUGC	ENSMUST00000036578.6|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr11_+_69098937_69098985	0.389718	AAAGUGC	ENSMUST00000021271.7|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chrX_+_77511002_77511100	0.388981	AAAGUGC	ENSMUST00000088217.5|Tbl1x|ENSMUSG00000025246.7|transducin (beta)-like 1 X-linked
mm10_v2_chr1_-_119837613_119837673	0.387778	AAAGUGC	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr4_-_46991842_46991916	0.387739	AAAGUGC	ENSMUST00000107749.2|Gabbr2|ENSMUSG00000039809.9|gamma-aminobutyric acid (GABA) B receptor, 2
mm10_v2_chr12_+_9574437_9574448	0.387131	AAAGUGC	ENSMUST00000057021.7|Osr1|ENSMUSG00000048387.7|odd-skipped related 1 (Drosophila)
mm10_v2_chr6_-_112947246_112947277	0.379503	AAAGUGC	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr18_-_23041641_23041671	0.37847	AAAGUGC	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr17_+_57249450_57249522	0.376595	AAAGUGC	ENSMUST00000019631.9|Trip10|ENSMUSG00000019487.10|thyroid hormone receptor interactor 10
mm10_v2_chr3_-_58525867_58525873	0.37373	AAAGUGC	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr7_-_119895697_119895752	0.372818	AAAGUGC	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr11_-_118355496_118355506	0.37053	AAAGUGC	ENSMUST00000017610.3|Timp2|ENSMUSG00000017466.3|tissue inhibitor of metalloproteinase 2
mm10_v2_chr2_+_32288244_32288256	0.369519	AAAGUGC	ENSMUST00000113377.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000100194.2|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2
mm10_v2_chr7_-_65156416_65156570	0.365539	AAAGUGC	ENSMUST00000148459.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1 	ENSMUST00000119118.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1
mm10_v2_chr7_-_16614937_16615021	0.365188	AAAGUGC	ENSMUST00000171937.1|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1 	ENSMUST00000075845.4|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1
mm10_v2_chr16_-_32868325_32868368	0.36436	AAAGUGC	ENSMUST00000089684.3|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene 	ENSMUST00000040986.8|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene 	ENSMUST00000115105.2|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr7_+_123123870_123123901	0.362402	AAAGUGC	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr6_+_143167210_143167267	0.354731	AAAGUGC	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr14_+_18271122_18271186	0.354034	AAAGUGC	ENSMUST00000132374.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1 	ENSMUST00000133460.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1
mm10_v2_chr1_-_77515048_77515102	0.351999	AAAGUGC	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr9_-_66919646_66919710	0.349756	AAAGUGC	ENSMUST00000041139.7|Rab8b|ENSMUSG00000036943.8|RAB8B, member RAS oncogene family
mm10_v2_chr2_-_23572038_23572112	0.349387	AAAGUGC	ENSMUST00000132484.1|Spopl|ENSMUSG00000026771.8|speckle-type POZ protein-like
mm10_v2_chrX_+_99136119_99136138	0.347344	AAAGUGC	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr14_-_78725089_78725089	0.345043	AAAGUGC	ENSMUST00000074729.5|Dgkh|ENSMUSG00000034731.9|diacylglycerol kinase, eta
mm10_v2_chr16_-_67620880_67620922	0.341335	AAAGUGC	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr11_+_95712673_95712673	0.339707	AAAGUGC	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr9_-_52168111_52168111	0.33939	AAAGUGC	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr4_+_152096719_152096782	0.339164	AAAGUGC	ENSMUST00000105661.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5 	ENSMUST00000084115.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm10_v2_chr3_-_153725062_153725179	0.336946	AAAGUGC	ENSMUST00000064460.5|St6galnac3|ENSMUSG00000052544.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm10_v2_chr1_+_6214627_6214683	0.336589	AAAGUGC	ENSMUST00000027040.6|Rb1cc1|ENSMUSG00000025907.8|RB1-inducible coiled-coil 1
mm10_v2_chr11_-_80779989_80780033	0.335389	AAAGUGC	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr1_-_74124420_74124466	0.334338	AAAGUGC	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr6_+_114643094_114643105	0.333686	AAAGUGC	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr4_-_155222535_155222592	0.333645	AAAGUGC	ENSMUST00000084103.3|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian) 	ENSMUST00000030917.5|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian)
mm10_v2_chrX_-_164980310_164980375	0.333487	AAAGUGC	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr1_+_75142775_75142797	0.33006	AAAGUGC	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr12_-_85339346_85339391	0.327646	AAAGUGC	ENSMUST00000040992.7|Nek9|ENSMUSG00000034290.9|NIMA (never in mitosis gene a)-related expressed kinase 9
mm10_v2_chr10_-_7780866_7780923	0.326184	AAAGUGC	ENSMUST00000124838.1|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1 	ENSMUST00000039763.7|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1
mm10_v2_chr15_-_99370427_99370489	0.325659	AAAGUGC	ENSMUST00000081224.7|Fmnl3|ENSMUSG00000023008.12|formin-like 3 	ENSMUST00000120633.1|Fmnl3|ENSMUSG00000023008.12|formin-like 3 	ENSMUST00000088233.6|Fmnl3|ENSMUSG00000023008.12|formin-like 3
mm10_v2_chr7_-_30588717_30588749	0.321178	AAAGUGC	ENSMUST00000006470.7|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B 	ENSMUST00000108154.2|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B
mm10_v2_chr6_+_72414301_72414319	0.320579	AAAGUGC	ENSMUST00000065906.7|Ggcx|ENSMUSG00000053460.7|gamma-glutamyl carboxylase
mm10_v2_chr10_-_80742211_80742280	0.320357	AAAGUGC	ENSMUST00000020420.7|Ap3d1|ENSMUSG00000020198.7|adaptor-related protein complex 3, delta 1 subunit
mm10_v2_chr1_+_155158703_155158776	0.319926	AAAGUGC	ENSMUST00000027743.7|Stx6|ENSMUSG00000026470.9|syntaxin 6
mm10_v2_chrX_-_48454152_48454193	0.314985	AAAGUGC	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr6_-_92214897_92214925	0.312433	AAAGUGC	ENSMUST00000014694.8|Zfyve20|ENSMUSG00000014550.8|zinc finger, FYVE domain containing 20
mm10_v2_chr19_+_22448242_22448283	0.309428	AAAGUGC	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr8_+_14095849_14095915	0.308844	AAAGUGC	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr6_+_86849488_86849628	0.308422	AAAGUGC	ENSMUST00000089519.6|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1 	ENSMUST00000113668.1|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1
mm10_v2_chr12_-_87200200_87200284	0.306836	AAAGUGC	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr3_+_59006978_59006978	0.305746	AAAGUGC	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr6_-_127151044_127151055	0.303667	AAAGUGC	ENSMUST00000000188.8|Ccnd2|ENSMUSG00000000184.9|cyclin D2
mm10_v2_chr10_+_79854618_79854640	0.300042	AAAGUGC	ENSMUST00000165704.1|Ptbp1|ENSMUSG00000006498.10|polypyrimidine tract binding protein 1
mm10_v2_chr9_+_122351555_122351608	0.292884	AAAGUGC	ENSMUST00000156520.1|Abhd5|ENSMUSG00000032540.9|abhydrolase domain containing 5
mm10_v2_chr6_+_122819888_122819938	0.290953	AAAGUGC	ENSMUST00000003238.7|Foxj2|ENSMUSG00000003154.9|forkhead box J2
mm10_v2_chr6_-_100287441_100287465	0.290411	AAAGUGC	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr10_-_26373956_26374088	0.289513	AAAGUGC	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr4_-_128806045_128806167	0.289011	AAAGUGC	ENSMUST00000106072.2|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362 	ENSMUST00000170934.1|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362
mm10_v2_chr5_+_139380581_139380707	0.288965	AAAGUGC	ENSMUST00000051293.7|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr5_+_64803513_64803530	0.287817	AAAGUGC	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr10_-_5922385_5922407	0.286611	AAAGUGC	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr7_-_47008397_47008421	0.284893	AAAGUGC	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr7_+_114415272_114415297	0.284677	AAAGUGC	ENSMUST00000032909.8|Pde3b|ENSMUSG00000030671.8|phosphodiesterase 3B, cGMP-inhibited
mm10_v2_chr11_-_4594750_4594820	0.284597	AAAGUGC	ENSMUST00000109943.3|Mtmr3|ENSMUSG00000034354.11|myotubularin related protein 3
mm10_v2_chrX_-_162888426_162888473	0.28233	AAAGUGC	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr5_+_96997676_96997766	0.282294	AAAGUGC	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr4_-_129641060_129641080	0.281529	AAAGUGC	ENSMUST00000046425.9|Txlna|ENSMUSG00000053841.9|taxilin alpha 	ENSMUST00000133803.1|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr5_+_88886809_88886825	0.281214	AAAGUGC	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr9_+_53537021_53537074	0.280996	AAAGUGC	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr12_-_64965496_64965538	0.279251	AAAGUGC	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr2_-_26092149_26092177	0.278569	AAAGUGC	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr3_+_137867675_137867797	0.277799	AAAGUGC	ENSMUST00000090178.5|Dnajb14|ENSMUSG00000074212.3|DnaJ (Hsp40) homolog, subfamily B, member 14
mm10_v2_chr4_+_62965560_62965617	0.277544	AAAGUGC	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr5_-_25498702_25498745	0.276694	AAAGUGC	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr12_-_3309912_3309975	0.27651	AAAGUGC	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr1_-_91931172_91931176	0.275753	AAAGUGC	ENSMUST00000097644.2|Hdac4|ENSMUSG00000073617.2|histone deacetylase 4
mm10_v2_chr15_+_80711292_80711340	0.275327	AAAGUGC	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr16_-_55934845_55934868	0.275158	AAAGUGC	ENSMUST00000121129.1|Cep97|ENSMUSG00000022604.12|centrosomal protein 97 	ENSMUST00000023270.7|Cep97|ENSMUSG00000022604.12|centrosomal protein 97
mm10_v2_chr12_+_64917901_64917944	0.274799	AAAGUGC	ENSMUST00000058135.4|Gm527|ENSMUSG00000047227.4|predicted gene 527
mm10_v2_chr17_+_26973161_26973219	0.272313	AAAGUGC	ENSMUST00000120016.1|Zbtb9|ENSMUSG00000079605.4|zinc finger and BTB domain containing 9 	ENSMUST00000133257.1|Ggnbp1|ENSMUSG00000048731.8|gametogenetin binding protein 1
mm10_v2_chr7_-_74013676_74013699	0.270029	AAAGUGC	ENSMUST00000026896.4|St8sia2|ENSMUSG00000025789.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm10_v2_chr2_+_4400958_4400975	0.268906	AAAGUGC	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr4_+_86874396_86874438	0.267755	AAAGUGC	ENSMUST00000045224.7|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2 	ENSMUST00000084433.4|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2
mm10_v2_chr16_-_21694570_21694665	0.267391	AAAGUGC	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr6_-_128143525_128143594	0.266039	AAAGUGC	ENSMUST00000032503.5|Tspan9|ENSMUSG00000030352.8|tetraspanin 9 	ENSMUST00000112173.1|Tspan9|ENSMUSG00000030352.8|tetraspanin 9
mm10_v2_chr18_+_7869159_7869209	0.263606	AAAGUGC	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
mm10_v2_chr13_-_13393592_13393624	0.262408	AAAGUGC	ENSMUST00000021738.8|Gpr137b|ENSMUSG00000021306.10|G protein-coupled receptor 137B
mm10_v2_chr6_+_47835650_47835725	0.261981	AAAGUGC	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr10_-_42478488_42478565	0.261502	AAAGUGC	ENSMUST00000041024.8|Lace1|ENSMUSG00000038302.8|lactation elevated 1
mm10_v2_chr9_+_14276301_14276347	0.258326	AAAGUGC	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr5_-_125389915_125390055	0.253642	AAAGUGC	ENSMUST00000136312.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr7_-_29505447_29505473	0.252748	AAAGUGC	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr6_+_83794974_83794985	0.252727	AAAGUGC	ENSMUST00000037376.7|Nagk|ENSMUSG00000034744.7|N-acetylglucosamine kinase
mm10_v2_chr2_+_113327711_113327753	0.252171	AAAGUGC	ENSMUST00000099576.2|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr11_+_60537978_60538074	0.250098	AAAGUGC	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr12_+_32378692_32378789	0.249888	AAAGUGC	ENSMUST00000172332.2|Ccdc71l|ENSMUSG00000090946.2|coiled-coil domain containing 71 like
mm10_v2_chr15_-_38300693_38300715	0.249776	AAAGUGC	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr14_-_36968769_36968793	0.248021	AAAGUGC	ENSMUST00000090024.4|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr17_+_88530113_88530142	0.247399	AAAGUGC	ENSMUST00000038551.6|Ppp1r21|ENSMUSG00000034709.7|protein phosphatase 1, regulatory subunit 21
mm10_v2_chr2_+_168081004_168081035	0.247027	AAAGUGC	ENSMUST00000052125.6|Pard6b|ENSMUSG00000044641.7|par-6 (partitioning defective 6) homolog beta (C. elegans)
mm10_v2_chr5_-_23616528_23616597	0.246246	AAAGUGC	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr15_-_31530999_31531069	0.245327	AAAGUGC	ENSMUST00000090227.4|March6|ENSMUSG00000039100.9|membrane-associated ring finger (C3HC4) 6
mm10_v2_chr19_+_44989073_44989101	0.245048	AAAGUGC	ENSMUST00000026225.8|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr19_+_60811574_60811619	0.243631	AAAGUGC	ENSMUST00000128357.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000119633.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000025957.8|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A
mm10_v2_chr1_-_172297989_172298064	0.243039	AAAGUGC	ENSMUST00000085913.4|Atp1a2|ENSMUSG00000007097.8|ATPase, Na+/K+ transporting, alpha 2 polypeptide 	ENSMUST00000097464.2|Atp1a2|ENSMUSG00000007097.8|ATPase, Na+/K+ transporting, alpha 2 polypeptide 	ENSMUST00000137679.1|Atp1a2|ENSMUSG00000007097.8|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm10_v2_chr7_-_98656530_98656600	0.240623	AAAGUGC	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr14_-_70599832_70599887	0.236505	AAAGUGC	ENSMUST00000022690.9|Fam160b2|ENSMUSG00000022095.9|family with sequence similarity 160, member B2
mm10_v2_chr11_+_51763682_51763749	0.234617	AAAGUGC	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr1_+_130717320_130717333	0.233098	AAAGUGC	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr17_-_51832666_51832678	0.232554	AAAGUGC	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr4_-_134767940_134768024	0.232492	AAAGUGC	ENSMUST00000037828.6|Ldlrap1|ENSMUSG00000037295.6|low density lipoprotein receptor adaptor protein 1
mm10_v2_chr8_-_105484350_105484350	0.232367	AAAGUGC	ENSMUST00000044286.5|Zdhhc1|ENSMUSG00000039199.5|zinc finger, DHHC domain containing 1
mm10_v2_chr1_+_132007606_132007634	0.231834	AAAGUGC	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr5_-_76304474_76304548	0.231062	AAAGUGC	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr8_+_90828820_90828842	0.230632	AAAGUGC	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr9_+_75311395_75311395	0.228897	AAAGUGC	ENSMUST00000076889.6|Gnb5|ENSMUSG00000032192.8|guanine nucleotide binding protein (G protein), beta 5
mm10_v2_chr12_-_100725028_100725081	0.226896	AAAGUGC	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr1_+_66468364_66468435	0.226262	AAAGUGC	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr10_+_62133082_62133098	0.225226	AAAGUGC	ENSMUST00000050103.1|Neurog3|ENSMUSG00000044312.3|neurogenin 3
mm10_v2_chr10_-_62880014_62880014	0.22388	AAAGUGC	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr17_-_43667015_43667163	0.222777	AAAGUGC	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr3_-_122619663_122619680	0.221592	AAAGUGC	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr13_-_46929718_46929800	0.22114	AAAGUGC	ENSMUST00000056978.7|Kif13a|ENSMUSG00000021375.9|kinesin family member 13A
mm10_v2_chr3_+_38886940_38886940	0.218771	AAAGUGC	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr11_-_50210765_50210827	0.218712	AAAGUGC	ENSMUST00000143379.1|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000015981.5|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000102774.4|Sqstm1|ENSMUSG00000015837.9|sequestosome 1
mm10_v2_chr8_-_109737714_109737786	0.218643	AAAGUGC	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr5_+_137350371_137350513	0.217247	AAAGUGC	ENSMUST00000166239.1|Ephb4|ENSMUSG00000029710.9|Eph receptor B4 	ENSMUST00000111054.1|Ephb4|ENSMUSG00000029710.9|Eph receptor B4
mm10_v2_chr4_-_101265236_101265282	0.217238	AAAGUGC	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr9_+_108002501_108002680	0.216781	AAAGUGC	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr4_+_3678108_3678134	0.216767	AAAGUGC	ENSMUST00000041377.6|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog 	ENSMUST00000103010.3|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
mm10_v2_chr1_-_40790642_40790686	0.216262	AAAGUGC	ENSMUST00000039672.5|Mfsd9|ENSMUSG00000041945.6|major facilitator superfamily domain containing 9
mm10_v2_chrX_+_139610612_139610632	0.215729	AAAGUGC	ENSMUST00000113026.1|Rnf128|ENSMUSG00000031438.5|ring finger protein 128
mm10_v2_chr2_+_153291404_153291459	0.214096	AAAGUGC	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr4_-_126429501_126429556	0.213508	AAAGUGC	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr16_-_20621255_20621304	0.211215	AAAGUGC	ENSMUST00000052939.2|Camk2n2|ENSMUSG00000051146.2|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm10_v2_chr19_+_8989277_8989295	0.21092	AAAGUGC	ENSMUST00000092955.3|Ahnak|ENSMUSG00000069833.6|AHNAK nucleoprotein (desmoyokin) 	ENSMUST00000092956.2|Ahnak|ENSMUSG00000069833.6|AHNAK nucleoprotein (desmoyokin)
mm10_v2_chr11_+_106084577_106084623	0.210697	AAAGUGC	ENSMUST00000002044.9|Map3k3|ENSMUSG00000020700.11|mitogen-activated protein kinase kinase kinase 3
mm10_v2_chr2_+_155133501_155133559	0.209513	AAAGUGC	ENSMUST00000029126.8|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase 	ENSMUST00000109685.1|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase
mm10_v2_chr10_-_127211528_127211626	0.207862	AAAGUGC	ENSMUST00000013970.7|Pip4k2c|ENSMUSG00000025417.7|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm10_v2_chr9_-_97111117_97111159	0.207735	AAAGUGC	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr8_+_45507768_45507818	0.205062	AAAGUGC	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr11_-_120624973_120625014	0.204814	AAAGUGC	ENSMUST00000106183.2|Sirt7|ENSMUSG00000025138.8|sirtuin 7 	ENSMUST00000080202.5|Sirt7|ENSMUSG00000025138.8|sirtuin 7
mm10_v2_chr11_+_4257557_4257557	0.204295	AAAGUGC	ENSMUST00000066283.5|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chr6_-_85374606_85374664	0.201974	AAAGUGC	ENSMUST00000060837.7|Rab11fip5|ENSMUSG00000051343.9|RAB11 family interacting protein 5 (class I)
mm10_v2_chr6_-_116193426_116193501	0.201595	AAAGUGC	ENSMUST00000088896.3|Tmcc1|ENSMUSG00000030126.11|transmembrane and coiled coil domains 1
mm10_v2_chr2_-_34372004_34372044	0.201523	AAAGUGC	ENSMUST00000113132.2|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3 	ENSMUST00000040638.8|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3
mm10_v2_chr13_+_56702983_56703112	0.199953	AAAGUGC	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr4_+_109978004_109978053	0.199199	AAAGUGC	ENSMUST00000061187.3|Dmrta2|ENSMUSG00000047143.3|doublesex and mab-3 related transcription factor like family A2
mm10_v2_chr19_+_23141183_23141263	0.197267	AAAGUGC	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr11_+_105589970_105590028	0.195934	AAAGUGC	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr2_+_164832862_164832878	0.195112	AAAGUGC	ENSMUST00000103093.3|Ctsa|ENSMUSG00000017760.9|cathepsin A 	ENSMUST00000017904.2|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr19_+_29367447_29367468	0.193253	AAAGUGC	ENSMUST00000016640.7|Cd274|ENSMUSG00000016496.7|CD274 antigen
mm10_v2_chr5_+_122707546_122707654	0.192461	AAAGUGC	ENSMUST00000081554.6|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000031429.7|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000139631.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000142664.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4
mm10_v2_chr11_+_35769462_35769484	0.190895	AAAGUGC	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr11_+_102284931_102285033	0.190381	AAAGUGC	ENSMUST00000036376.6|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2 	ENSMUST00000100387.4|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr15_+_85735754_85735808	0.188458	AAAGUGC	ENSMUST00000109422.1|Ppara|ENSMUSG00000022383.7|peroxisome proliferator activated receptor alpha
mm10_v2_chr11_-_103267405_103267472	0.188442	AAAGUGC	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr12_+_105784694_105784872	0.186338	AAAGUGC	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr6_-_120916813_120916867	0.185425	AAAGUGC	ENSMUST00000004560.5|Bid|ENSMUSG00000004446.6|BH3 interacting domain death agonist
mm10_v2_chr17_-_29007925_29007962	0.185012	AAAGUGC	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr16_-_23988852_23988852	0.184396	AAAGUGC	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr3_-_56183678_56183701	0.183261	AAAGUGC	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr1_+_87755870_87756115	0.182251	AAAGUGC	ENSMUST00000144047.1|Atg16l1|ENSMUSG00000026289.9|autophagy related 16-like 1 (S. cerevisiae) 	ENSMUST00000027512.6|Atg16l1|ENSMUSG00000026289.9|autophagy related 16-like 1 (S. cerevisiae) 	ENSMUST00000113186.1|Atg16l1|ENSMUSG00000026289.9|autophagy related 16-like 1 (S. cerevisiae) 	ENSMUST00000113190.2|Atg16l1|ENSMUSG00000026289.9|autophagy related 16-like 1 (S. cerevisiae)
mm10_v2_chr15_+_89253035_89253035	0.181691	AAAGUGC	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chr2_+_128126030_128126056	0.180214	AAAGUGC	ENSMUST00000089634.5|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000019281.7|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000110341.2|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103211.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103210.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator)
mm10_v2_chr12_+_55836365_55836408	0.179073	AAAGUGC	ENSMUST00000059250.6|Brms1l|ENSMUSG00000012076.7|breast cancer metastasis-suppressor 1-like
mm10_v2_chr2_-_64097994_64098023	0.17858	AAAGUGC	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr4_-_147904680_147904710	0.176166	AAAGUGC	ENSMUST00000105716.2|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105715.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105714.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000030884.3|Mfn2|ENSMUSG00000029020.7|mitofusin 2
mm10_v2_chr18_-_53744509_53744629	0.176116	AAAGUGC	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr17_+_53566971_53567023	0.175492	AAAGUGC	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr13_+_81657732_81657846	0.175476	AAAGUGC	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr18_-_46525940_46525999	0.173885	AAAGUGC	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr18_-_82692734_82692933	0.171365	AAAGUGC	ENSMUST00000182122.1|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236 	ENSMUST00000171071.2|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236
mm10_v2_chr19_+_27217357_27217424	0.169169	AAAGUGC	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr8_-_126593972_126593997	0.167297	AAAGUGC	ENSMUST00000054960.7|Irf2bp2|ENSMUSG00000051495.7|interferon regulatory factor 2 binding protein 2
mm10_v2_chr19_-_6840590_6840644	0.166687	AAAGUGC	ENSMUST00000170516.2|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4 	ENSMUST00000025903.5|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4
mm10_v2_chr5_+_117976761_117976803	0.166441	AAAGUGC	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr16_-_31275277_31275290	0.166378	AAAGUGC	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chrX_-_162159717_162159732	0.165953	AAAGUGC	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chr5_-_146221426_146221555	0.165195	AAAGUGC	ENSMUST00000161859.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr4_+_119539652_119539698	0.165139	AAAGUGC	ENSMUST00000044564.8|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000162267.1|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000106310.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000138845.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3
mm10_v2_chr3_+_102995709_102995795	0.163588	AAAGUGC	ENSMUST00000029447.5|Sike1|ENSMUSG00000027854.6|suppressor of IKBKE 1 	ENSMUST00000119450.1|Sike1|ENSMUSG00000027854.6|suppressor of IKBKE 1
mm10_v2_chr5_+_23434435_23434471	0.16248	AAAGUGC	ENSMUST00000094962.2|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E 	ENSMUST00000115128.1|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E
mm10_v2_chr5_-_102069905_102069940	0.162107	AAAGUGC	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr13_+_14063776_14063822	0.160577	AAAGUGC	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr12_+_71015966_71016063	0.159472	AAAGUGC	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr10_-_76345254_76345371	0.159392	AAAGUGC	ENSMUST00000036033.7|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000160048.1|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000105417.3|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm10_v2_chr5_+_31240864_31240941	0.159373	AAAGUGC	ENSMUST00000078312.5|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000031034.5|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000155934.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000152534.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000139602.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1
mm10_v2_chr2_+_32535315_32535359	0.159122	AAAGUGC	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr14_-_100149764_100149764	0.159027	AAAGUGC	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr11_+_53770014_53770057	0.157499	AAAGUGC	ENSMUST00000108920.2|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000140866.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000108922.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr6_-_149101674_149101686	0.15635	AAAGUGC	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr12_-_87299705_87299705	0.1558	AAAGUGC	ENSMUST00000125733.1|Ism2|ENSMUSG00000050671.6|isthmin 2 homolog (zebrafish)
mm10_v2_chr6_+_38433913_38433965	0.153843	AAAGUGC	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr1_-_43098622_43098686	0.152103	AAAGUGC	ENSMUST00000095014.1|Tgfbrap1|ENSMUSG00000070939.3|transforming growth factor, beta receptor associated protein 1
mm10_v2_chr1_+_59764264_59764286	0.151561	AAAGUGC	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr3_+_30602056_30602096	0.151478	AAAGUGC	ENSMUST00000047502.7|Mynn|ENSMUSG00000037730.8|myoneurin
mm10_v2_chr2_+_68861433_68861510	0.149846	AAAGUGC	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr18_+_64254359_64254387	0.149392	AAAGUGC	ENSMUST00000025477.7|St8sia3|ENSMUSG00000056812.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm10_v2_chr17_+_86753900_86753914	0.149254	AAAGUGC	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr5_+_137518880_137518880	0.147487	AAAGUGC	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chrX_-_74085586_74085652	0.146862	AAAGUGC	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr1_+_127774164_127774238	0.145905	AAAGUGC	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr9_-_101251810_101251839	0.143687	AAAGUGC	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr16_-_85173692_85173718	0.143301	AAAGUGC	ENSMUST00000005406.10|App|ENSMUSG00000022892.10|amyloid beta (A4) precursor protein
mm10_v2_chr4_-_136021722_136021763	0.14113	AAAGUGC	ENSMUST00000030427.5|Tceb3|ENSMUSG00000028668.5|transcription elongation factor B (SIII), polypeptide 3
mm10_v2_chr19_+_3767397_3767523	0.140325	AAAGUGC	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr7_-_143740316_143740368	0.139776	AAAGUGC	ENSMUST00000119499.1|Osbpl5|ENSMUSG00000037606.11|oxysterol binding protein-like 5
mm10_v2_chr3_-_30969399_30969425	0.133877	AAAGUGC	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chr11_+_53350783_53350833	0.133152	AAAGUGC	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr11_-_68853119_68853140	0.131614	AAAGUGC	ENSMUST00000018880.7|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chrX_-_103981242_103981287	0.131427	AAAGUGC	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr10_-_43174521_43174569	0.130586	AAAGUGC	ENSMUST00000040275.7|Sobp|ENSMUSG00000038248.7|sine oculis-binding protein homolog (Drosophila)
mm10_v2_chr7_+_80186835_80186904	0.13034	AAAGUGC	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr17_+_24470393_24470481	0.12995	AAAGUGC	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr5_-_43782086_43782149	0.129348	AAAGUGC	ENSMUST00000119523.1|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000087465.4|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000121736.1|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000047857.9|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5
mm10_v2_chr12_-_75177325_75177359	0.128129	AAAGUGC	ENSMUST00000042299.2|Kcnh5|ENSMUSG00000034402.2|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm10_v2_chr12_-_81781121_81781176	0.128009	AAAGUGC	ENSMUST00000035987.7|Map3k9|ENSMUSG00000042724.7|mitogen-activated protein kinase kinase kinase 9
mm10_v2_chr2_+_85050439_85050500	0.127748	AAAGUGC	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr10_-_128645965_128645991	0.127008	AAAGUGC	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr1_-_43827751_43827800	0.126517	AAAGUGC	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr9_+_7764041_7764177	0.126491	AAAGUGC	ENSMUST00000052865.9|Tmem123|ENSMUSG00000050912.9|transmembrane protein 123
mm10_v2_chr1_+_132417409_132417464	0.124921	AAAGUGC	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chrX_+_47912387_47912442	0.123871	AAAGUGC	ENSMUST00000001202.8|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe 	ENSMUST00000115020.1|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe
mm10_v2_chrX_-_162643629_162643665	0.12166	AAAGUGC	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr18_-_4352944_4352962	0.120991	AAAGUGC	ENSMUST00000025078.2|Map3k8|ENSMUSG00000024235.4|mitogen-activated protein kinase kinase kinase 8
mm10_v2_chr2_+_121955964_121956001	0.120391	AAAGUGC	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chrX_+_98149666_98149721	0.119067	AAAGUGC	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr1_-_63114516_63114667	0.119008	AAAGUGC	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr9_+_68653761_68653786	0.116289	AAAGUGC	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr8_-_68735058_68735147	0.112489	AAAGUGC	ENSMUST00000136060.1|Csgalnact1|ENSMUSG00000036356.8|chondroitin sulfate N-acetylgalactosaminyltransferase 1 	ENSMUST00000130214.1|Csgalnact1|ENSMUSG00000036356.8|chondroitin sulfate N-acetylgalactosaminyltransferase 1 	ENSMUST00000078350.6|Csgalnact1|ENSMUSG00000036356.8|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm10_v2_chr18_-_38601268_38601355	0.112264	AAAGUGC	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr13_-_8871696_8871749	0.111364	AAAGUGC	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr8_+_84701430_84701497	0.108106	AAAGUGC	ENSMUST00000037165.4|Lyl1|ENSMUSG00000034041.4|lymphoblastomic leukemia 1
mm10_v2_chr16_-_35769356_35769384	0.107942	AAAGUGC	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr13_+_9276477_9276620	0.106897	AAAGUGC	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr13_-_111808938_111809018	0.106216	AAAGUGC	ENSMUST00000109267.2|Map3k1|ENSMUSG00000021754.11|mitogen-activated protein kinase kinase kinase 1
mm10_v2_chr9_-_44881274_44881323	0.105943	AAAGUGC	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr11_-_103412668_103412711	0.105874	AAAGUGC	ENSMUST00000041272.9|Plekhm1|ENSMUSG00000034247.9|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm10_v2_chr3_-_108200807_108200858	0.105594	AAAGUGC	ENSMUST00000106655.1|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1 	ENSMUST00000065664.6|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1
mm10_v2_chr11_-_21370452_21370485	0.103685	AAAGUGC	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chrX_+_152144240_152144272	0.103319	AAAGUGC	ENSMUST00000168786.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2 	ENSMUST00000112605.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2 	ENSMUST00000112604.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2
mm10_v2_chr2_-_39226343_39226451	0.103052	AAAGUGC	ENSMUST00000028087.3|Ppp6c|ENSMUSG00000026753.3|protein phosphatase 6, catalytic subunit
mm10_v2_chr7_-_121707253_121707460	0.0985388	AAAGUGC	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr4_-_142239356_142239418	0.0979978	AAAGUGC	ENSMUST00000036476.3|Kazn|ENSMUSG00000040606.7|kazrin, periplakin interacting protein
mm10_v2_chr6_-_22356068_22356175	0.0968635	AAAGUGC	ENSMUST00000163963.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C 	ENSMUST00000165576.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C
mm10_v2_chr12_+_80644212_80644265	0.0967897	AAAGUGC	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr3_-_58692391_58692412	0.0963258	AAAGUGC	ENSMUST00000070368.7|Siah2|ENSMUSG00000036432.8|seven in absentia 2
mm10_v2_chr9_-_42472198_42472265	0.0960646	AAAGUGC	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr8_-_70792392_70792451	0.0957053	AAAGUGC	ENSMUST00000166004.1|Mast3|ENSMUSG00000031833.9|microtubule associated serine/threonine kinase 3
mm10_v2_chr16_+_78301458_78301496	0.0953151	AAAGUGC	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr16_-_97922582_97922633	0.0948858	AAAGUGC	ENSMUST00000170757.1|C2cd2|ENSMUSG00000045975.7|C2 calcium-dependent domain containing 2
mm10_v2_chr16_-_18235074_18235184	0.0945985	AAAGUGC	ENSMUST00000076957.5|Zdhhc8|ENSMUSG00000060166.5|zinc finger, DHHC domain containing 8
mm10_v2_chr2_-_110362985_110363001	0.094033	AAAGUGC	ENSMUST00000099626.3|Fibin|ENSMUSG00000074971.3|fin bud initiation factor homolog (zebrafish)
mm10_v2_chr8_-_25754214_25754280	0.0923501	AAAGUGC	ENSMUST00000033975.6|Ddhd2|ENSMUSG00000061313.7|DDHD domain containing 2
mm10_v2_chr11_+_98863610_98863646	0.0908359	AAAGUGC	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr17_+_78200240_78200258	0.0899433	AAAGUGC	ENSMUST00000112498.2|Crim1|ENSMUSG00000024074.7|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm10_v2_chr2_-_23040177_23040241	0.0884108	AAAGUGC	ENSMUST00000114544.3|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000139038.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000126112.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000178908.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000078977.7|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000140164.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000149719.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr9_+_21723576_21723615	0.0877541	AAAGUGC	ENSMUST00000034713.7|Ldlr|ENSMUSG00000032193.8|low density lipoprotein receptor
mm10_v2_chr1_+_133246092_133246099	0.0867347	AAAGUGC	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr2_+_117121374_117121374	0.0848943	AAAGUGC	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr5_+_30814571_30814641	0.0844958	AAAGUGC	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr11_-_85139939_85140038	0.0838352	AAAGUGC	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr14_-_16575456_16575501	0.0824925	AAAGUGC	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr11_-_76763550_76763582	0.0816345	AAAGUGC	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chr5_-_147725988_147726023	0.0811232	AAAGUGC	ENSMUST00000110529.1|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031652.3|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031653.5|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1
mm10_v2_chr6_-_39419757_39419817	0.0807191	AAAGUGC	ENSMUST00000146785.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1 	ENSMUST00000114823.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1
mm10_v2_chr4_+_24973419_24973419	0.0799871	AAAGUGC	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr7_+_19119853_19119913	0.0795538	AAAGUGC	ENSMUST00000053109.3|Fbxo46|ENSMUSG00000050428.6|F-box protein 46
mm10_v2_chr9_+_69989466_69989539	0.0773204	AAAGUGC	ENSMUST00000034754.5|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000085393.6|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000117450.1|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2
mm10_v2_chr5_-_138263942_138263994	0.0770803	AAAGUGC	ENSMUST00000048421.7|BC037034|ENSMUSG00000036948.11|cDNA sequence BC037034 	ENSMUST00000164203.1|BC037034|ENSMUSG00000091964.1|cDNA sequence BC037034
mm10_v2_chr3_+_157947414_157947510	0.0756239	AAAGUGC	ENSMUST00000164582.1|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c 	ENSMUST00000040787.8|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c
mm10_v2_chr15_-_99820072_99820154	0.0753285	AAAGUGC	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr8_+_79639618_79639730	0.0751506	AAAGUGC	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr14_-_103099499_103099554	0.0748002	AAAGUGC	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr14_-_47568427_47568436	0.0741772	AAAGUGC	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr4_-_132510493_132510509	0.0740033	AAAGUGC	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr13_-_101768154_101768217	0.071784	AAAGUGC	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr7_-_67759735_67759759	0.069771	AAAGUGC	ENSMUST00000074233.4|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein 	ENSMUST00000051389.8|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein
mm10_v2_chr1_+_82586942_82586988	0.0677876	AAAGUGC	ENSMUST00000113457.2|Col4a3|ENSMUSG00000079465.2|collagen, type IV, alpha 3
mm10_v2_chr12_+_84451485_84451518	0.0668475	AAAGUGC	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr10_+_62980233_62980262	0.0667171	AAAGUGC	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr14_-_105176860_105176918	0.0658024	AAAGUGC	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr6_-_28261907_28261943	0.0654518	AAAGUGC	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr17_-_53539411_53539459	0.0628427	AAAGUGC	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr5_-_123749371_123749391	0.0625617	AAAGUGC	ENSMUST00000182955.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182489.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000050827.7|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr6_-_120038647_120038699	0.0623545	AAAGUGC	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr11_-_120437656_120437731	0.0622491	AAAGUGC	ENSMUST00000044271.8|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae) 	ENSMUST00000103017.3|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae)
mm10_v2_chr16_+_42907563_42907684	0.0619543	AAAGUGC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr7_-_19271797_19271823	0.0616314	AAAGUGC	ENSMUST00000032561.8|Vasp|ENSMUSG00000030403.8|vasodilator-stimulated phosphoprotein
mm10_v2_chr2_+_22622183_22622205	0.0609764	AAAGUGC	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr13_+_49341549_49341623	0.0571736	AAAGUGC	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr5_+_139252314_139252329	0.0554201	AAAGUGC	ENSMUST00000026976.5|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm10_v2_chr9_-_57467985_57468074	0.0548106	AAAGUGC	ENSMUST00000046587.6|Scamp5|ENSMUSG00000040722.6|secretory carrier membrane protein 5
mm10_v2_chr13_-_85288999_85289058	0.0538775	AAAGUGC	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr19_+_18749983_18749983	0.0528424	AAAGUGC	ENSMUST00000040489.7|Trpm6|ENSMUSG00000024727.8|transient receptor potential cation channel, subfamily M, member 6
mm10_v2_chr14_-_74947865_74947883	0.0520935	AAAGUGC	ENSMUST00000088970.5|Lrch1|ENSMUSG00000068015.6|leucine-rich repeats and calponin homology (CH) domain containing 1
mm10_v2_chr3_+_58415689_58415689	0.0517606	AAAGUGC	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr2_+_133552159_133552237	0.0478674	AAAGUGC	ENSMUST00000028836.6|Bmp2|ENSMUSG00000027358.6|bone morphogenetic protein 2
mm10_v2_chr7_-_118491912_118491975	0.0478311	AAAGUGC	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr19_+_36834215_36834297	0.0478109	AAAGUGC	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr10_-_117148474_117148510	0.0471416	AAAGUGC	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr5_-_72504433_72504520	0.0465912	AAAGUGC	ENSMUST00000175766.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000177290.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000176974.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000167460.2|Corin|ENSMUSG00000005220.4|corin
mm10_v2_chr15_+_101174096_101174148	0.0444518	AAAGUGC	ENSMUST00000000544.9|Acvr1b|ENSMUSG00000000532.9|activin A receptor, type 1B
mm10_v2_chr11_-_70687917_70687981	0.0444199	AAAGUGC	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr9_+_57537518_57537577	0.0433488	AAAGUGC	ENSMUST00000114200.2|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B 	ENSMUST00000093833.4|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B
mm10_v2_chr2_+_152081529_152081624	0.0433263	AAAGUGC	ENSMUST00000064061.3|Scrt2|ENSMUSG00000060257.2|scratch homolog 2, zinc finger protein (Drosophila)
mm10_v2_chr14_+_54883377_54883507	0.041928	AAAGUGC	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr8_+_110721462_110721486	0.041777	AAAGUGC	ENSMUST00000052457.8|Mtss1l|ENSMUSG00000033763.8|metastasis suppressor 1-like
mm10_v2_chr4_-_151861762_151861876	0.0404232	AAAGUGC	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr10_+_96616998_96617015	0.0389415	AAAGUGC	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr9_-_31211805_31211824	0.0371147	AAAGUGC	ENSMUST00000072634.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2 	ENSMUST00000079758.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2
mm10_v2_chr18_+_36281069_36281151	0.0338165	AAAGUGC	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr9_-_99568849_99568911	0.0337597	AAAGUGC	ENSMUST00000035043.5|Armc8|ENSMUSG00000032468.5|armadillo repeat containing 8
mm10_v2_chr1_+_93478964_93479108	0.0335413	AAAGUGC	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chrX_+_42067836_42067872	0.0313759	AAAGUGC	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr13_-_68999518_68999565	0.0299604	AAAGUGC	ENSMUST00000022013.7|Adcy2|ENSMUSG00000021536.7|adenylate cyclase 2
mm10_v2_chr17_-_46031813_46031863	0.0296605	AAAGUGC	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr15_+_37233036_37233073	0.0296403	AAAGUGC	ENSMUST00000161405.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000022895.8|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000161532.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila)
mm10_v2_chr10_-_128960965_128960988	0.0288644	AAAGUGC	ENSMUST00000026398.3|Mettl7b|ENSMUSG00000025347.3|methyltransferase like 7B
mm10_v2_chr16_+_33380765_33380787	0.0284515	AAAGUGC	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr4_-_81442756_81442836	0.027783	AAAGUGC	ENSMUST00000107262.1|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein 	ENSMUST00000102830.3|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein
mm10_v2_chr5_+_29569208_29569267	0.0260442	AAAGUGC	ENSMUST00000049453.4|Ube3c|ENSMUSG00000039000.4|ubiquitin protein ligase E3C
mm10_v2_chr2_+_30952955_30953016	0.0250099	AAAGUGC	ENSMUST00000028199.5|Tor1b|ENSMUSG00000026848.8|torsin family 1, member B
mm10_v2_chr19_-_46395722_46395756	0.0243912	AAAGUGC	ENSMUST00000040270.4|Actr1a|ENSMUSG00000025228.4|ARP1 actin-related protein 1A, centractin alpha
mm10_v2_chr5_-_137786651_137786668	0.0239356	AAAGUGC	ENSMUST00000031740.9|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr12_+_4082574_4082594	0.0238969	AAAGUGC	ENSMUST00000020986.7|Dnajc27|ENSMUSG00000020657.9|DnaJ (Hsp40) homolog, subfamily C, member 27
mm10_v2_chr11_+_49846732_49846758	0.0228882	AAAGUGC	ENSMUST00000178543.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000164643.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000109179.2|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000020634.7|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9
mm10_v2_chr19_+_55316313_55316367	0.0224973	AAAGUGC	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr6_-_89362581_89362637	0.0220141	AAAGUGC	ENSMUST00000163139.1|Plxna1|ENSMUSG00000030084.5|plexin A1
mm10_v2_chrX_+_162760388_162760421	0.0218484	AAAGUGC	ENSMUST00000033720.5|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7 	ENSMUST00000112327.1|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7
mm10_v2_chr6_-_94700137_94700176	0.0213831	AAAGUGC	ENSMUST00000101126.2|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1 	ENSMUST00000032105.4|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1
mm10_v2_chr8_+_46163651_46163729	0.0195339	AAAGUGC	ENSMUST00000034048.6|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene 	ENSMUST00000145229.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr13_+_45389734_45389750	0.0184374	AAAGUGC	ENSMUST00000038275.9|Mylip|ENSMUSG00000038175.9|myosin regulatory light chain interacting protein
mm10_v2_chr7_-_19458494_19458494	0.0181972	AAAGUGC	ENSMUST00000085715.5|Mark4|ENSMUSG00000030397.9|MAP/microtubule affinity-regulating kinase 4
mm10_v2_chr10_+_20148920_20149014	0.0176387	AAAGUGC	ENSMUST00000116259.3|Map7|ENSMUSG00000019996.10|microtubule-associated protein 7
mm10_v2_chr9_+_25252439_25252516	0.0174728	AAAGUGC	ENSMUST00000115272.2|Sept7|ENSMUSG00000001833.10|septin 7 	ENSMUST00000165594.2|Sept7|ENSMUSG00000001833.10|septin 7
mm10_v2_chr1_-_80340480_80340512	0.0172161	AAAGUGC	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr8_+_105225145_105225193	0.0166872	AAAGUGC	ENSMUST00000034361.3|D230025D16Rik|ENSMUSG00000031889.3|RIKEN cDNA D230025D16 gene
mm10_v2_chr14_-_73325773_73325836	0.0132288	AAAGUGC	ENSMUST00000022701.6|Rb1|ENSMUSG00000022105.6|retinoblastoma 1
mm10_v2_chr9_-_82975475_82975493	0.0129959	AAAGUGC	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr9_+_65908967_65909020	0.0129096	AAAGUGC	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr12_+_85288591_85288712	0.0111362	AAAGUGC	ENSMUST00000059341.4|Zc2hc1c|ENSMUSG00000045064.4|zinc finger, C2HC-type containing 1C
mm10_v2_chr11_+_70844745_70844975	0.0108131	AAAGUGC	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr5_-_66173051_66173117	0.010086	AAAGUGC	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr6_+_137252297_137252326	0.00772814	AAAGUGC	ENSMUST00000077115.6|Ptpro|ENSMUSG00000030223.8|protein tyrosine phosphatase, receptor type, O 	ENSMUST00000167679.1|Ptpro|ENSMUSG00000030223.8|protein tyrosine phosphatase, receptor type, O
mm10_v2_chr16_-_16560201_16560223	0.00508023	AAAGUGC	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr18_-_88894322_88894371	0.00358153	AAAGUGC	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr9_+_110532501_110532600	0.00252737	AAAGUGC	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
mm10_v2_chr7_+_100706702_100706731	0.00198768	AAAGUGC	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr12_-_21417356_21417436	0.00141082	AAAGUGC	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr1_+_185454803_185454848	0.000356386	AAAGUGC	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
