mm10_v2_chr17_+_24488773_24488799	0.11885	AGCUUAU	ENSMUST00000024958.7|Caskin1|ENSMUSG00000033597.8|CASK interacting protein 1
mm10_v2_chr9_-_8004585_8004623	0.0998151	AGCUUAU	ENSMUST00000086580.5|Yap1|ENSMUSG00000053110.7|yes-associated protein 1 	ENSMUST00000065353.6|Yap1|ENSMUSG00000053110.7|yes-associated protein 1
mm10_v2_chr2_+_113327711_113327753	0.098541	AGCUUAU	ENSMUST00000099576.2|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr4_+_43875524_43875558	0.0907279	AGCUUAU	ENSMUST00000030198.6|Reck|ENSMUSG00000028476.7|reversion-inducing-cysteine-rich protein with kazal motifs
mm10_v2_chr8_-_111876661_111876725	0.0878353	AGCUUAU	ENSMUST00000034431.1|Tmem170|ENSMUSG00000031953.1|transmembrane protein 170
mm10_v2_chr11_-_119086221_119086250	0.0754817	AGCUUAU	ENSMUST00000026665.7|Cbx4|ENSMUSG00000039989.7|chromobox 4
mm10_v2_chrX_+_135839034_135839075	0.0735922	AGCUUAU	ENSMUST00000173804.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2 	ENSMUST00000113136.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2
mm10_v2_chr4_-_3938354_3938401	0.0704868	AGCUUAU	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr6_-_129507107_129507171	0.0703938	AGCUUAU	ENSMUST00000183258.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000182784.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000032265.6|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000162815.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1
mm10_v2_chr17_+_25188380_25188418	0.0699814	AGCUUAU	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr9_-_117252450_117252489	0.0593999	AGCUUAU	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr5_+_102481374_102481391	0.055118	AGCUUAU	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr6_-_126166726_126166761	0.0505353	AGCUUAU	ENSMUST00000112244.2|Ntf3|ENSMUSG00000049107.7|neurotrophin 3 	ENSMUST00000050484.7|Ntf3|ENSMUSG00000049107.7|neurotrophin 3
mm10_v2_chr18_+_75367529_75367561	0.0499898	AGCUUAU	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr9_-_70657121_70657188	0.0493174	AGCUUAU	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr14_-_105896819_105896819	0.0444513	AGCUUAU	ENSMUST00000022709.4|Spry2|ENSMUSG00000022114.4|sprouty homolog 2 (Drosophila)
mm10_v2_chr3_-_131344892_131344940	0.0433965	AGCUUAU	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr3_+_138065052_138065078	0.0432342	AGCUUAU	ENSMUST00000163080.2|1110002E22Rik|ENSMUSG00000090066.2|RIKEN cDNA 1110002E22 gene
mm10_v2_chr2_-_148408146_148408188	0.0421774	AGCUUAU	ENSMUST00000099270.3|Thbd|ENSMUSG00000074743.3|thrombomodulin
mm10_v2_chr16_-_67620880_67620922	0.0405949	AGCUUAU	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr17_-_63499983_63500075	0.0401593	AGCUUAU	ENSMUST00000024761.6|Fbxl17|ENSMUSG00000023965.7|F-box and leucine-rich repeat protein 17
mm10_v2_chr5_-_103100054_103100088	0.0400089	AGCUUAU	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr15_+_85735754_85735808	0.0399024	AGCUUAU	ENSMUST00000109422.1|Ppara|ENSMUSG00000022383.7|peroxisome proliferator activated receptor alpha
mm10_v2_chr1_+_185454803_185454848	0.0397146	AGCUUAU	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr11_+_85832551_85832551	0.0393983	AGCUUAU	ENSMUST00000000095.6|Tbx2|ENSMUSG00000000093.6|T-box 2
mm10_v2_chr2_+_79635352_79635410	0.0375396	AGCUUAU	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr9_-_123632545_123632565	0.0365493	AGCUUAU	ENSMUST00000026273.8|Slc6a20b|ENSMUSG00000025243.8|solute carrier family 6 (neurotransmitter transporter), member 20B
mm10_v2_chr3_+_103914560_103914605	0.0348945	AGCUUAU	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr9_-_43105718_43105793	0.0347866	AGCUUAU	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr5_+_52363925_52363955	0.0345723	AGCUUAU	ENSMUST00000101208.4|Sod3|ENSMUSG00000072941.4|superoxide dismutase 3, extracellular
mm10_v2_chr8_-_34965631_34965714	0.0344186	AGCUUAU	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chrX_+_103356464_103356488	0.034259	AGCUUAU	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr5_+_64803513_64803530	0.0340894	AGCUUAU	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr4_-_19708922_19709004	0.0338981	AGCUUAU	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr17_+_26715644_26715724	0.033118	AGCUUAU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr14_+_79426454_79426511	0.0321614	AGCUUAU	ENSMUST00000061222.7|Kbtbd7|ENSMUSG00000043881.8|kelch repeat and BTB (POZ) domain containing 7
mm10_v2_chr6_-_39206782_39206831	0.0321572	AGCUUAU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr11_-_30025915_30026033	0.0317853	AGCUUAU	ENSMUST00000058902.5|Eml6|ENSMUSG00000044072.8|echinoderm microtubule associated protein like 6
mm10_v2_chr16_+_11322876_11322911	0.0316811	AGCUUAU	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr5_-_112577186_112577204	0.0316638	AGCUUAU	ENSMUST00000079491.7|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like 	ENSMUST00000075387.6|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like
mm10_v2_chrX_+_42149288_42149412	0.0315559	AGCUUAU	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr17_-_51832666_51832678	0.0307982	AGCUUAU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_-_12301914_12301922	0.0298635	AGCUUAU	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr13_-_107890059_107890073	0.028403	AGCUUAU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr2_+_24367565_24367620	0.0279039	AGCUUAU	ENSMUST00000102942.1|Psd4|ENSMUSG00000026979.10|pleckstrin and Sec7 domain containing 4
mm10_v2_chr12_+_9574437_9574448	0.0278588	AGCUUAU	ENSMUST00000057021.7|Osr1|ENSMUSG00000048387.7|odd-skipped related 1 (Drosophila)
mm10_v2_chr13_+_34875488_34875515	0.0271285	AGCUUAU	ENSMUST00000077853.3|Prpf4b|ENSMUSG00000021413.8|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm10_v2_chr5_-_37824580_37824584	0.0269666	AGCUUAU	ENSMUST00000063116.9|Msx1|ENSMUSG00000048450.10|msh homeobox 1
mm10_v2_chr5_+_3803160_3803193	0.0248361	AGCUUAU	ENSMUST00000171023.1|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing 	ENSMUST00000080085.4|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing
mm10_v2_chr1_+_130717320_130717333	0.0239745	AGCUUAU	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr6_-_126645784_126645801	0.023776	AGCUUAU	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr1_-_91459254_91459336	0.022872	AGCUUAU	ENSMUST00000069620.8|Per2|ENSMUSG00000055866.8|period circadian clock 2
mm10_v2_chr15_+_80711292_80711340	0.0224366	AGCUUAU	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr9_-_96631487_96631617	0.0221655	AGCUUAU	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr3_+_137867675_137867797	0.0220564	AGCUUAU	ENSMUST00000090178.5|Dnajb14|ENSMUSG00000074212.3|DnaJ (Hsp40) homolog, subfamily B, member 14
mm10_v2_chr9_-_116175318_116175363	0.0218054	AGCUUAU	ENSMUST00000061101.4|Tgfbr2|ENSMUSG00000032440.6|transforming growth factor, beta receptor II 	ENSMUST00000035014.6|Tgfbr2|ENSMUSG00000032440.6|transforming growth factor, beta receptor II
mm10_v2_chr13_-_101768154_101768217	0.0215475	AGCUUAU	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr14_-_39472825_39473088	0.0195547	AGCUUAU	ENSMUST00000168810.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000173780.1|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000166968.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3
mm10_v2_chr1_-_74124420_74124466	0.0195303	AGCUUAU	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr6_+_134830145_134830179	0.019086	AGCUUAU	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr11_-_100939357_100939456	0.0187705	AGCUUAU	ENSMUST00000092671.5|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3 	ENSMUST00000103114.1|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3
mm10_v2_chr4_-_70534904_70534987	0.0185094	AGCUUAU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr19_+_41482632_41482688	0.018397	AGCUUAU	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr13_+_81711407_81711457	0.0182504	AGCUUAU	ENSMUST00000057598.5|Mblac2|ENSMUSG00000051098.5|metallo-beta-lactamase domain containing 2
mm10_v2_chr1_+_65186727_65186750	0.0180592	AGCUUAU	ENSMUST00000097707.4|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing 	ENSMUST00000081154.7|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing
mm10_v2_chr18_+_56432116_56432163	0.0180533	AGCUUAU	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr12_+_52516077_52516077	0.0175487	AGCUUAU	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr17_-_64331817_64331957	0.0171841	AGCUUAU	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr15_-_43170809_43170834	0.0169024	AGCUUAU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr6_+_66896397_66896479	0.016726	AGCUUAU	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr10_+_42761483_42761496	0.0153183	AGCUUAU	ENSMUST00000019937.4|Sec63|ENSMUSG00000019802.7|SEC63-like (S. cerevisiae)
mm10_v2_chr7_-_119895697_119895752	0.0146405	AGCUUAU	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr14_+_63943666_63943687	0.0146362	AGCUUAU	ENSMUST00000079652.5|Sox7|ENSMUSG00000063060.5|SRY-box containing gene 7
mm10_v2_chr4_-_155222535_155222592	0.0144227	AGCUUAU	ENSMUST00000084103.3|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian) 	ENSMUST00000030917.5|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian)
mm10_v2_chr1_-_77515048_77515102	0.0143381	AGCUUAU	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr6_-_71440623_71440645	0.01424	AGCUUAU	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr14_+_49066495_49066587	0.0135481	AGCUUAU	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr14_+_17660956_17660963	0.0134349	AGCUUAU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr14_-_21052420_21052450	0.0129668	AGCUUAU	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr15_-_12592556_12592556	0.0122912	AGCUUAU	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr6_-_83831736_83831750	0.0119389	AGCUUAU	ENSMUST00000058383.8|Paip2b|ENSMUSG00000045896.8|poly(A) binding protein interacting protein 2B
mm10_v2_chr3_-_41082992_41083046	0.011856	AGCUUAU	ENSMUST00000058578.7|Pgrmc2|ENSMUSG00000049940.7|progesterone receptor membrane component 2
mm10_v2_chr7_+_130865756_130865812	0.0117853	AGCUUAU	ENSMUST00000120441.1|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr6_+_71493850_71493918	0.0114372	AGCUUAU	ENSMUST00000064637.4|Rnf103|ENSMUSG00000052656.6|ring finger protein 103 	ENSMUST00000114178.1|Rnf103|ENSMUSG00000052656.6|ring finger protein 103
mm10_v2_chr2_+_173659760_173659816	0.0113566	AGCUUAU	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr3_+_34649987_34650005	0.0110014	AGCUUAU	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr2_+_109917639_109917656	0.0107867	AGCUUAU	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr5_+_16553488_16553550	0.0107628	AGCUUAU	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr9_-_52679429_52679429	0.0102881	AGCUUAU	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr2_+_48814109_48814173	0.00996532	AGCUUAU	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr1_-_58586191_58586323	0.00954591	AGCUUAU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr3_-_56183678_56183701	0.0090351	AGCUUAU	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr11_+_59662471_59662543	0.00855035	AGCUUAU	ENSMUST00000072031.6|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000116371.1|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000108751.1|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000066330.8|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein
mm10_v2_chr18_+_36281069_36281151	0.00805126	AGCUUAU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr13_+_56609516_56609606	0.00695517	AGCUUAU	ENSMUST00000045173.8|Tgfbi|ENSMUSG00000035493.9|transforming growth factor, beta induced
mm10_v2_chr4_+_126103940_126104020	0.00669671	AGCUUAU	ENSMUST00000116286.2|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000094761.4|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000139524.1|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40
mm10_v2_chr13_+_64432479_64432557	0.00642824	AGCUUAU	ENSMUST00000021939.6|Cdk20|ENSMUSG00000021483.7|cyclin-dependent kinase 20
mm10_v2_chr10_-_19015347_19015410	0.00638713	AGCUUAU	ENSMUST00000019997.4|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr2_+_69897220_69897247	0.00573291	AGCUUAU	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr2_+_118901428_118901488	0.00559535	AGCUUAU	ENSMUST00000036578.6|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr2_+_59612034_59612109	0.00548481	AGCUUAU	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chr16_-_46496955_46496986	0.00537946	AGCUUAU	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr8_+_107293463_107293483	0.00505623	AGCUUAU	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr8_+_106935720_106935776	0.00499443	AGCUUAU	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr4_+_100095791_100095867	0.00497629	AGCUUAU	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr5_-_128953303_128953362	0.00490864	AGCUUAU	ENSMUST00000111346.1|Rimbp2|ENSMUSG00000029420.8|RIMS binding protein 2
mm10_v2_chr19_-_29805989_29806009	0.00449995	AGCUUAU	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr11_-_100650693_100650749	0.0044956	AGCUUAU	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr14_+_31019125_31019157	0.00436371	AGCUUAU	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr2_-_104494400_104494463	0.00398982	AGCUUAU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr5_+_123142187_123142229	0.00369208	AGCUUAU	ENSMUST00000174836.1|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B 	ENSMUST00000163030.2|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B
mm10_v2_chr2_-_137116624_137116644	0.00326626	AGCUUAU	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr17_+_78200240_78200258	0.00315344	AGCUUAU	ENSMUST00000112498.2|Crim1|ENSMUSG00000024074.7|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm10_v2_chr1_-_161788489_161788496	0.00262619	AGCUUAU	ENSMUST00000000834.2|Fasl|ENSMUSG00000000817.9|Fas ligand (TNF superfamily, member 6)
mm10_v2_chr15_+_98092569_98092603	0.00210835	AGCUUAU	ENSMUST00000163507.1|Pfkm|ENSMUSG00000033065.7|phosphofructokinase, muscle
mm10_v2_chr1_+_59764264_59764286	0.00198803	AGCUUAU	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr10_-_62880014_62880014	0.00164963	AGCUUAU	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr3_+_129199919_129199943	0.00152524	AGCUUAU	ENSMUST00000029657.9|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2 	ENSMUST00000106382.4|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr17_-_88065291_88065291	0.00151944	AGCUUAU	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr13_-_115101909_115101984	0.00149357	AGCUUAU	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr10_-_120979327_120979373	0.00141832	AGCUUAU	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr13_-_85288999_85289058	0.00138913	AGCUUAU	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr2_-_131352857_131352889	0.00133755	AGCUUAU	ENSMUST00000059372.4|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr4_-_14826582_14826589	0.00102413	AGCUUAU	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr15_+_102470632_102470716	0.000601782	AGCUUAU	ENSMUST00000077037.5|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2 	ENSMUST00000078404.7|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2 	ENSMUST00000108838.3|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2
mm10_v2_chr11_-_6475992_6476102	0.000394578	AGCUUAU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr18_+_35562158_35562174	0.000370455	AGCUUAU	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
