mm10_v2_chr11_-_40755201_40755311	0.0843365	GGAGUGU	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr1_-_21961581_21961581	0.0530519	GGAGUGU	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr3_+_103102604_103102711	0.0451817	GGAGUGU	ENSMUST00000173206.1|Dennd2c|ENSMUSG00000007379.9|DENN/MADD domain containing 2C
mm10_v2_chr17_-_17624458_17624496	0.0354137	GGAGUGU	ENSMUST00000041047.2|Lnpep|ENSMUSG00000023845.6|leucyl/cystinyl aminopeptidase
mm10_v2_chr6_+_14901344_14901364	0.0324655	GGAGUGU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr13_-_100552442_100552498	0.032262	GGAGUGU	ENSMUST00000159515.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000160859.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000069756.4|Ocln|ENSMUSG00000021638.6|occludin
mm10_v2_chr8_+_111094630_111094641	0.0317978	GGAGUGU	ENSMUST00000135302.1|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit 	ENSMUST00000039333.3|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit
mm10_v2_chrX_-_101734125_101734269	0.0314845	GGAGUGU	ENSMUST00000056614.6|Cxcr3|ENSMUSG00000050232.6|chemokine (C-X-C motif) receptor 3
mm10_v2_chr5_-_148399901_148399912	0.0302048	GGAGUGU	ENSMUST00000048116.8|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr16_+_10488175_10488204	0.0297189	GGAGUGU	ENSMUST00000023147.6|Ciita|ENSMUSG00000022504.9|class II transactivator
mm10_v2_chr5_-_74068361_74068438	0.0280771	GGAGUGU	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr1_+_55237177_55237255	0.0268719	GGAGUGU	ENSMUST00000061334.8|Mars2|ENSMUSG00000046994.8|methionine-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr8_-_73353477_73353551	0.0263812	GGAGUGU	ENSMUST00000119826.1|Large|ENSMUSG00000004383.11|like-glycosyltransferase
mm10_v2_chr7_+_16781341_16781352	0.0222671	GGAGUGU	ENSMUST00000108496.2|Slc1a5|ENSMUSG00000001918.11|solute carrier family 1 (neutral amino acid transporter), member 5
mm10_v2_chr9_-_50659780_50659801	0.0217155	GGAGUGU	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr13_+_16014457_16014475	0.0206569	GGAGUGU	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr17_+_42315947_42315947	0.0204363	GGAGUGU	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr1_-_178337774_178337797	0.0203354	GGAGUGU	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr11_-_87359011_87359081	0.0196102	GGAGUGU	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr17_-_56935388_56935504	0.0182363	GGAGUGU	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr4_+_136286061_136286114	0.0162933	GGAGUGU	ENSMUST00000069195.4|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46 	ENSMUST00000130658.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr7_-_17062384_17062427	0.0162337	GGAGUGU	ENSMUST00000153833.1|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit 	ENSMUST00000108492.2|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit
mm10_v2_chr3_+_90341654_90341654	0.0161486	GGAGUGU	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr1_-_177796451_177796514	0.0155147	GGAGUGU	ENSMUST00000016105.8|Adss|ENSMUSG00000015961.8|adenylosuccinate synthetase, non muscle
mm10_v2_chr13_-_107022027_107022138	0.0153488	GGAGUGU	ENSMUST00000117539.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000122233.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000022204.9|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000159772.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A
mm10_v2_chr19_+_11516473_11516512	0.0146096	GGAGUGU	ENSMUST00000163078.1|Ms4a6b|ENSMUSG00000024677.7|membrane-spanning 4-domains, subfamily A, member 6B
mm10_v2_chr5_+_71699918_71699949	0.0142732	GGAGUGU	ENSMUST00000031122.7|Gabrb1|ENSMUSG00000029212.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm10_v2_chr9_+_59656368_59656368	0.0141688	GGAGUGU	ENSMUST00000034834.9|Pkm|ENSMUSG00000032294.10|pyruvate kinase, muscle 	ENSMUST00000163694.2|Pkm|ENSMUSG00000032294.10|pyruvate kinase, muscle
mm10_v2_chr5_+_143464493_143464536	0.0141156	GGAGUGU	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chrX_-_101263986_101264002	0.013743	GGAGUGU	ENSMUST00000101358.2|Gm614|ENSMUSG00000090141.1|predicted gene 614
mm10_v2_chrX_-_101269023_101269023	0.013371	GGAGUGU	ENSMUST00000117736.1|Gm20489|ENSMUSG00000092463.1|predicted gene 20489
mm10_v2_chrX_+_99821021_99821021	0.0133014	GGAGUGU	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr10_+_128337761_128337832	0.01275	GGAGUGU	ENSMUST00000005826.7|Cs|ENSMUSG00000005683.7|citrate synthase
mm10_v2_chr2_-_146511992_146512015	0.0116497	GGAGUGU	ENSMUST00000109986.2|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr9_+_54586450_54586512	0.0113106	GGAGUGU	ENSMUST00000167866.1|Idh3a|ENSMUSG00000032279.10|isocitrate dehydrogenase 3 (NAD+) alpha
mm10_v2_chr13_+_92354783_92354783	0.0112849	GGAGUGU	ENSMUST00000022218.4|Dhfr|ENSMUSG00000021707.4|dihydrofolate reductase
mm10_v2_chr19_+_11469353_11469381	0.0111146	GGAGUGU	ENSMUST00000165310.1|Ms4a6c|ENSMUSG00000079419.3|membrane-spanning 4-domains, subfamily A, member 6C
mm10_v2_chr4_+_129984833_129984876	0.0100901	GGAGUGU	ENSMUST00000120204.1|Bai2|ENSMUSG00000028782.8|brain-specific angiogenesis inhibitor 2
mm10_v2_chr8_+_107293463_107293483	0.00988257	GGAGUGU	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr1_+_139422196_139422383	0.00983182	GGAGUGU	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr7_-_80803253_80803331	0.00973472	GGAGUGU	ENSMUST00000167377.1|Iqgap1|ENSMUSG00000030536.9|IQ motif containing GTPase activating protein 1
mm10_v2_chr12_+_57230406_57230460	0.00954099	GGAGUGU	ENSMUST00000139049.1|Prps1l3|ENSMUSG00000079104.4|phosphoribosyl pyrophosphate synthetase 1-like 3 	ENSMUST00000145003.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human) 	ENSMUST00000123498.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human)
mm10_v2_chrX_-_56598069_56598107	0.008987	GGAGUGU	ENSMUST00000059899.2|Mmgt1|ENSMUSG00000061273.3|membrane magnesium transporter 1
mm10_v2_chr7_+_45434833_45434871	0.0089819	GGAGUGU	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr4_+_100095791_100095867	0.00864072	GGAGUGU	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr8_-_84687839_84687884	0.00855532	GGAGUGU	ENSMUST00000001975.4|Nacc1|ENSMUSG00000001910.4|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm10_v2_chr9_+_96196246_96196280	0.00814016	GGAGUGU	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr10_-_42276744_42276763	0.00741097	GGAGUGU	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr16_+_32914094_32914142	0.00738895	GGAGUGU	ENSMUST00000023491.6|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170899.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000171118.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170201.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000165616.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000135193.2|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3
mm10_v2_chr16_+_44173239_44173270	0.00709593	GGAGUGU	ENSMUST00000119746.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr11_+_50602072_50602094	0.00635106	GGAGUGU	ENSMUST00000040523.8|Adamts2|ENSMUSG00000036545.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
mm10_v2_chr4_-_126468580_126468653	0.00540985	GGAGUGU	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr19_+_10389068_10389090	0.00539669	GGAGUGU	ENSMUST00000169121.1|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000076968.3|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000073899.4|Syt7|ENSMUSG00000024743.8|synaptotagmin VII
mm10_v2_chr7_+_43463145_43463185	0.00528783	GGAGUGU	ENSMUST00000107977.1|Vsig10l|ENSMUSG00000070604.3|ZV-set and immunoglobulin domain containing 10 like
mm10_v2_chrX_+_75382384_75382399	0.0049567	GGAGUGU	ENSMUST00000033541.4|Fundc2|ENSMUSG00000031198.4|FUN14 domain containing 2
mm10_v2_chr19_-_47536997_47537119	0.00483439	GGAGUGU	ENSMUST00000182808.1|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1 	ENSMUST00000049369.9|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1
mm10_v2_chr14_-_121505247_121505264	0.00390539	GGAGUGU	ENSMUST00000088386.6|Slc15a1|ENSMUSG00000025557.9|solute carrier family 15 (oligopeptide transporter), member 1
mm10_v2_chr4_+_123201503_123201529	0.00386924	GGAGUGU	ENSMUST00000068262.5|Nt5c1a|ENSMUSG00000054958.6|5'-nucleotidase, cytosolic IA
mm10_v2_chr15_-_51991679_51991760	0.00371074	GGAGUGU	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chr6_-_39725448_39725478	0.00357474	GGAGUGU	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr12_-_55821157_55821195	0.00342113	GGAGUGU	ENSMUST00000110687.1|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1 	ENSMUST00000085385.5|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1
mm10_v2_chr11_+_70017085_70017146	0.00312641	GGAGUGU	ENSMUST00000108589.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr12_+_53248677_53248677	0.00302758	GGAGUGU	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr3_+_88142328_88142483	0.00273488	GGAGUGU	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr19_-_40588338_40588371	0.00266417	GGAGUGU	ENSMUST00000176939.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1
mm10_v2_chr2_-_120404058_120404092	0.00250729	GGAGUGU	ENSMUST00000090042.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000110729.1|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000090046.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A
mm10_v2_chr8_+_40307458_40307458	0.002278	GGAGUGU	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chrX_+_166238901_166238914	0.00212207	GGAGUGU	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr11_+_77493408_77493571	0.00190102	GGAGUGU	ENSMUST00000037285.3|Git1|ENSMUSG00000011877.7|G protein-coupled receptor kinase-interactor 1 	ENSMUST00000100812.3|Git1|ENSMUSG00000011877.7|G protein-coupled receptor kinase-interactor 1
mm10_v2_chr11_-_61930246_61930257	0.00172665	GGAGUGU	ENSMUST00000102650.3|Akap10|ENSMUSG00000047804.9|A kinase (PRKA) anchor protein 10
mm10_v2_chr1_+_131827977_131828019	0.000976615	GGAGUGU	ENSMUST00000086559.6|Slc41a1|ENSMUSG00000013275.9|solute carrier family 41, member 1
mm10_v2_chr18_+_76944384_76944444	0.000935704	GGAGUGU	ENSMUST00000156454.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000150990.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000026485.7|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000148955.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2
mm10_v2_chr3_+_156561792_156561869	0.000462426	GGAGUGU	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr7_-_16924114_16924137	0.000187945	GGAGUGU	ENSMUST00000019514.9|Calm3|ENSMUSG00000019370.10|calmodulin 3
mm10_v2_chr12_-_27342696_27342726	0.000139803	GGAGUGU	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr12_-_104751900_104751952	0.000113027	GGAGUGU	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
