mm10_v2_chr5_-_100159261_100159314	1.91205	Gli2	ENSMUST00000139520.1|Tmem150c|ENSMUSG00000050640.10|transmembrane protein 150C
mm10_v2_chrX_-_7574120_7574312	1.70807	Gli2	ENSMUST00000045924.7|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000115742.2|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000150787.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr5_-_117319242_117319242	1.47918	Gli2	ENSMUST00000100834.1|Gm10399|ENSMUSG00000072688.1|predicted gene 10399
mm10_v2_chr6_-_72789240_72789262	1.29922	Gli2	ENSMUST00000069536.5|Tcf7l1|ENSMUSG00000055799.7|transcription factor 7 like 1 (T cell specific, HMG box)
mm10_v2_chr8_+_127064107_127064347	1.29557	Gli2	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr11_-_107794557_107794729	1.2521	Gli2	ENSMUST00000021066.3|Cacng4|ENSMUSG00000020723.3|calcium channel, voltage-dependent, gamma subunit 4
mm10_v2_chr1_-_90967667_90967667	1.19017	Gli2	ENSMUST00000131428.1|Rab17|ENSMUSG00000026304.7|RAB17, member RAS oncogene family
mm10_v2_chr5_+_117319292_117319326	1.14213	Gli2	ENSMUST00000086464.4|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr6_-_72788952_72789061	1.11019	Gli2	ENSMUST00000114053.2|Tcf7l1|ENSMUSG00000055799.7|transcription factor 7 like 1 (T cell specific, HMG box)
mm10_v2_chr5_+_117319258_117319284	1.10267	Gli2	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr8_+_127063893_127063916	1.07808	Gli2	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr4_-_140648736_140648781	1.05047	Gli2	ENSMUST00000039204.3|Arhgef10l|ENSMUSG00000040964.10|Rho guanine nucleotide exchange factor (GEF) 10-like 	ENSMUST00000105799.1|Arhgef10l|ENSMUSG00000040964.10|Rho guanine nucleotide exchange factor (GEF) 10-like 	ENSMUST00000097820.2|Arhgef10l|ENSMUSG00000040964.10|Rho guanine nucleotide exchange factor (GEF) 10-like
mm10_v2_chr9_+_114978507_114978569	1.02487	Gli2	ENSMUST00000183104.1|Osbpl10|ENSMUSG00000040875.6|oxysterol binding protein-like 10
mm10_v2_chr7_+_28540863_28540886	1.01049	Gli2	ENSMUST00000119180.2|Sycn|ENSMUSG00000084174.2|syncollin
mm10_v2_chr18_-_35215008_35215033	0.974795	Gli2	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr12_-_70227622_70227683	0.962148	Gli2	ENSMUST00000071250.6|Pygl|ENSMUSG00000021069.10|liver glycogen phosphorylase
mm10_v2_chr9_+_100643605_100643626	0.960907	Gli2	ENSMUST00000041418.6|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr3_+_97628804_97628864	0.949917	Gli2	ENSMUST00000107050.1|Fmo5|ENSMUSG00000028088.8|flavin containing monooxygenase 5 	ENSMUST00000029729.8|Fmo5|ENSMUSG00000028088.8|flavin containing monooxygenase 5 	ENSMUST00000107049.1|Fmo5|ENSMUSG00000028088.8|flavin containing monooxygenase 5
mm10_v2_chr12_+_58211772_58211804	0.909716	Gli2	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr11_+_96929260_96929324	0.884963	Gli2	ENSMUST00000054311.5|Prr15l|ENSMUSG00000047040.9|proline rich 15-like 	ENSMUST00000107636.3|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chr11_+_101176041_101176041	0.865584	Gli2	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chr8_+_76902277_76902476	0.844155	Gli2	ENSMUST00000109912.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000128862.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2 	ENSMUST00000109911.1|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr16_-_31314804_31314808	0.83376	Gli2	ENSMUST00000115230.1|Apod|ENSMUSG00000022548.8|apolipoprotein D 	ENSMUST00000130560.1|Apod|ENSMUSG00000022548.8|apolipoprotein D
mm10_v2_chr9_+_100643448_100643542	0.828506	Gli2	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr8_+_127064022_127064086	0.827116	Gli2	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr11_+_96929367_96929394	0.780482	Gli2	ENSMUST00000062172.5|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chr11_+_62847111_62847132	0.770084	Gli2	ENSMUST00000150989.1|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10 	ENSMUST00000176577.1|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10
mm10_v2_chr4_+_63215402_63215435	0.743685	Gli2	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr6_-_124464772_124464794	0.726694	Gli2	ENSMUST00000008297.4|Clstn3|ENSMUSG00000008153.5|calsyntenin 3
mm10_v2_chr19_-_43674844_43674909	0.705281	Gli2	ENSMUST00000046038.7|Slc25a28|ENSMUSG00000040414.7|solute carrier family 25, member 28
mm10_v2_chr4_-_46536134_46536143	0.68406	Gli2	ENSMUST00000046897.6|Trim14|ENSMUSG00000039853.12|tripartite motif-containing 14
mm10_v2_chr4_+_32800246_32800289	0.672887	Gli2	ENSMUST00000062802.4|Lyrm2|ENSMUSG00000045854.4|LYR motif containing 2
mm10_v2_chr15_+_95790831_95790859	0.658653	Gli2	ENSMUST00000071874.6|Ano6|ENSMUSG00000064210.6|anoctamin 6
mm10_v2_chr8_+_85060055_85060135	0.658308	Gli2	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr2_-_104712122_104712180	0.6067	Gli2	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr11_+_116030304_116030385	0.597835	Gli2	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr9_+_107576915_107576990	0.591189	Gli2	ENSMUST00000112387.2|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000123005.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000010195.7|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000144392.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1
mm10_v2_chr4_+_40472180_40472180	0.587038	Gli2	ENSMUST00000049655.2|Tmem215|ENSMUSG00000046593.3|transmembrane protein 215
mm10_v2_chr7_-_137314394_137314445	0.584068	Gli2	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr6_-_137649211_137649294	0.583231	Gli2	ENSMUST00000134630.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000058210.6|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000111878.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr17_-_24632608_24632632	0.574352	Gli2	ENSMUST00000097373.1|Tsc2|ENSMUSG00000002496.9|tuberous sclerosis 2
mm10_v2_chr11_+_62847062_62847087	0.569095	Gli2	ENSMUST00000036085.4|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10
mm10_v2_chr4_-_46536096_46536130	0.568303	Gli2	ENSMUST00000102924.2|Trim14|ENSMUSG00000039853.12|tripartite motif-containing 14
mm10_v2_chr5_-_122900267_122900377	0.555836	Gli2	ENSMUST00000031435.7|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr7_-_81454751_81454764	0.546054	Gli2	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr5_-_148928619_148928659	0.525944	Gli2	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr5_-_139819906_139819932	0.518838	Gli2	ENSMUST00000147328.1|Tmem184a|ENSMUSG00000036687.7|transmembrane protein 184a
mm10_v2_chr7_-_121035096_121035096	0.518483	Gli2	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr5_+_147269959_147270102	0.514866	Gli2	ENSMUST00000085591.5|Pdx1|ENSMUSG00000029644.6|pancreatic and duodenal homeobox 1
mm10_v2_chr14_-_70443442_70443476	0.507237	Gli2	ENSMUST00000000793.5|Polr3d|ENSMUSG00000000776.6|polymerase (RNA) III (DNA directed) polypeptide D
mm10_v2_chr1_+_167349976_167350065	0.502565	Gli2	ENSMUST00000028004.9|Aldh9a1|ENSMUSG00000026687.9|aldehyde dehydrogenase 9, subfamily A1
mm10_v2_chr9_+_13662460_13662460	0.498873	Gli2	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr9_-_107770945_107771007	0.482315	Gli2	ENSMUST00000183248.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182022.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000035199.6|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182659.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5
mm10_v2_chrX_-_74023908_74023918	0.477952	Gli2	ENSMUST00000033769.8|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114352.1|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000068286.5|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114360.3|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114354.3|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1
mm10_v2_chr4_-_126968124_126968154	0.477796	Gli2	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr7_+_30650385_30650439	0.455806	Gli2	ENSMUST00000181529.1|Gm26610|ENSMUSG00000097674.1|predicted gene, 26610
mm10_v2_chr9_+_109095427_109095453	0.455184	Gli2	ENSMUST00000072093.6|Plxnb1|ENSMUSG00000053646.7|plexin B1
mm10_v2_chr9_-_108578657_108578675	0.442022	Gli2	ENSMUST00000068700.5|Wdr6|ENSMUSG00000066357.5|WD repeat domain 6
mm10_v2_chr12_-_31950535_31950560	0.440968	Gli2	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr18_+_61555308_61555345	0.436734	Gli2	ENSMUST00000165721.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000115246.2|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000166990.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000163205.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000170862.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr17_-_34214459_34214486	0.428738	Gli2	ENSMUST00000121995.1|Gm15821|ENSMUSG00000081512.1|predicted gene 15821
mm10_v2_chr1_+_167001417_167001431	0.425868	Gli2	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr7_+_12881165_12881204	0.422527	Gli2	ENSMUST00000144578.1|Zfp128|ENSMUSG00000060397.6|zinc finger protein 128
mm10_v2_chr17_-_24209377_24209416	0.422518	Gli2	ENSMUST00000024931.4|Ntn3|ENSMUSG00000079662.1|netrin 3
mm10_v2_chr9_-_58158498_58158554	0.415632	Gli2	ENSMUST00000168864.2|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr6_+_43265582_43265681	0.414373	Gli2	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr18_+_61555258_61555290	0.405271	Gli2	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr2_-_157566319_157566361	0.398404	Gli2	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr3_+_28781305_28781344	0.384997	Gli2	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr6_-_52158292_52158324	0.381736	Gli2	ENSMUST00000000964.5|Hoxa1|ENSMUSG00000029844.9|homeobox A1 	ENSMUST00000120363.1|Hoxa1|ENSMUSG00000029844.9|homeobox A1
mm10_v2_chrX_-_141725181_141725263	0.371552	Gli2	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr11_-_103344651_103344719	0.359662	Gli2	ENSMUST00000041385.7|Arhgap27|ENSMUSG00000034255.11|Rho GTPase activating protein 27
mm10_v2_chr11_-_94704499_94704499	0.355333	Gli2	ENSMUST00000069852.1|Gm11541|ENSMUSG00000056008.1|predicted gene 11541
mm10_v2_chr11_+_73329727_73329748	0.352593	Gli2	ENSMUST00000092926.4|Spata22|ENSMUSG00000069825.5|spermatogenesis associated 22 	ENSMUST00000117445.1|Spata22|ENSMUSG00000069825.5|spermatogenesis associated 22
mm10_v2_chr19_+_27217357_27217424	0.348686	Gli2	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chrX_+_161717498_161717627	0.347706	Gli2	ENSMUST00000061514.7|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr8_-_27174623_27174651	0.341218	Gli2	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr3_+_107036156_107036181	0.340906	Gli2	ENSMUST00000052718.3|Kcna3|ENSMUSG00000047959.3|potassium voltage-gated channel, shaker-related subfamily, member 3
mm10_v2_chr14_-_64949838_64949886	0.334482	Gli2	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr12_-_31950210_31950246	0.321341	Gli2	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr13_-_54611274_54611297	0.319159	Gli2	ENSMUST00000049575.7|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr18_-_38250157_38250212	0.291305	Gli2	ENSMUST00000181871.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr10_+_42502030_42502041	0.287194	Gli2	ENSMUST00000105500.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3 	ENSMUST00000019939.5|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr18_+_61555689_61555751	0.286209	Gli2	ENSMUST00000167187.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr13_-_54611332_54611387	0.284876	Gli2	ENSMUST00000091609.4|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr1_+_40681659_40681712	0.283311	Gli2	ENSMUST00000027231.7|Slc9a2|ENSMUSG00000026062.7|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm10_v2_chr3_+_105452326_105452365	0.283084	Gli2	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr17_+_68837062_68837136	0.282017	Gli2	ENSMUST00000178545.1|Tmem200c|ENSMUSG00000095407.1|transmembrane protein 200C
mm10_v2_chr7_-_144738520_144738597	0.27955	Gli2	ENSMUST00000118556.2|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel 	ENSMUST00000033393.8|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr7_+_81571246_81571318	0.276716	Gli2	ENSMUST00000165460.1|Whamm|ENSMUSG00000045795.9|WAS protein homolog associated with actin, golgi membranes and microtubules
mm10_v2_chr7_-_144738478_144738508	0.274385	Gli2	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr8_+_10006656_10006843	0.274183	Gli2	ENSMUST00000033892.7|Tnfsf13b|ENSMUSG00000031497.8|tumor necrosis factor (ligand) superfamily, member 13b
mm10_v2_chr6_+_134920401_134920434	0.268521	Gli2	ENSMUST00000067327.4|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B 	ENSMUST00000003115.6|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B
mm10_v2_chr11_+_95712673_95712673	0.265816	Gli2	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr2_+_121956411_121956480	0.261912	Gli2	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr5_+_144190284_144190334	0.259156	Gli2	ENSMUST00000060747.7|Bhlha15|ENSMUSG00000052271.7|basic helix-loop-helix family, member a15
mm10_v2_chr2_+_71211706_71211794	0.258709	Gli2	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chrX_+_161717055_161717073	0.255365	Gli2	ENSMUST00000112338.1|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr11_+_117308135_117308158	0.252502	Gli2	ENSMUST00000153668.1|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr1_-_164935522_164935527	0.251514	Gli2	ENSMUST00000027860.7|Xcl1|ENSMUSG00000026573.7|chemokine (C motif) ligand 1
mm10_v2_chr4_+_103619580_103619665	0.248551	Gli2	ENSMUST00000106827.1|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr8_+_70754679_70754751	0.243405	Gli2	ENSMUST00000110093.2|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000143118.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000034301.5|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000110090.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family
mm10_v2_chr15_+_78899755_78899775	0.238615	Gli2	ENSMUST00000001226.3|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000061239.7|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1 	ENSMUST00000109698.2|Sh3bp1|ENSMUSG00000022436.9|SH3-domain binding protein 1
mm10_v2_chr9_+_100643755_100643770	0.236049	Gli2	ENSMUST00000133388.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr11_+_72796164_72796246	0.233233	Gli2	ENSMUST00000172220.1|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr7_+_35119285_35119301	0.233219	Gli2	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr19_-_8880883_8880933	0.220896	Gli2	ENSMUST00000096253.5|AI462493|ENSMUSG00000071654.5|expressed sequence AI462493
mm10_v2_chr8_-_13890233_13890300	0.22064	Gli2	ENSMUST00000033839.7|Coprs|ENSMUSG00000031458.7|coordinator of PRMT5, differentiation stimulator
mm10_v2_chr12_-_31950170_31950197	0.22031	Gli2	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr5_-_137786681_137786715	0.218299	Gli2	ENSMUST00000132726.1|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr9_-_43239816_43239842	0.216963	Gli2	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr11_+_72796254_72796268	0.2094	Gli2	ENSMUST00000069395.5|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr18_-_38250558_38250607	0.203511	Gli2	ENSMUST00000181757.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr6_+_113471427_113471475	0.19407	Gli2	ENSMUST00000058300.7|Il17rc|ENSMUSG00000030281.10|interleukin 17 receptor C
mm10_v2_chr17_+_28691342_28691399	0.193171	Gli2	ENSMUST00000114758.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000004990.6|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000062694.8|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000114754.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr2_-_37703275_37703290	0.188743	Gli2	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr6_+_135197977_135198023	0.173072	Gli2	ENSMUST00000111915.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene 	ENSMUST00000111916.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr11_+_32455362_32455438	0.169694	Gli2	ENSMUST00000051053.4|Ubtd2|ENSMUSG00000044949.4|ubiquitin domain containing 2
mm10_v2_chr3_-_135608221_135608290	0.169666	Gli2	ENSMUST00000132668.1|Nfkb1|ENSMUSG00000028163.11|nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
mm10_v2_chr7_-_16286744_16286795	0.165732	Gli2	ENSMUST00000150528.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000118976.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000146609.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9
mm10_v2_chr13_+_5861489_5861501	0.162726	Gli2	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr5_-_137786651_137786668	0.160482	Gli2	ENSMUST00000031740.9|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr7_+_126928844_126928899	0.1584	Gli2	ENSMUST00000032924.5|Kctd13|ENSMUSG00000030685.5|potassium channel tetramerisation domain containing 13
mm10_v2_chr9_+_45055166_45055195	0.155391	Gli2	ENSMUST00000114664.1|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3 	ENSMUST00000093856.3|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3
mm10_v2_chr2_+_160731684_160731760	0.15495	Gli2	ENSMUST00000174885.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1 	ENSMUST00000109462.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr18_+_38250240_38250287	0.151359	Gli2	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr9_+_50856924_50856987	0.139827	Gli2	ENSMUST00000174628.1|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000034560.7|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000114437.2|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000175645.1|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000176349.1|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000176798.1|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 	ENSMUST00000175640.1|Ppp2r1b|ENSMUSG00000032058.8|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
mm10_v2_chr7_+_141328122_141328139	0.137392	Gli2	ENSMUST00000133012.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80 	ENSMUST00000026578.7|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80
mm10_v2_chr19_+_27217011_27217042	0.128723	Gli2	ENSMUST00000164746.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000172302.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr17_-_84187939_84187954	0.126611	Gli2	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chr1_-_51915901_51915958	0.125732	Gli2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr8_+_107436355_107436421	0.125222	Gli2	ENSMUST00000166615.1|Wwp2|ENSMUSG00000031930.10|WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr1_+_55406163_55406388	0.121451	Gli2	ENSMUST00000042986.8|Plcl1|ENSMUSG00000038349.9|phospholipase C-like 1
mm10_v2_chr1_-_175625580_175625635	0.121244	Gli2	ENSMUST00000027810.7|Fh1|ENSMUSG00000026526.8|fumarate hydratase 1
mm10_v2_chr7_+_121707189_121707189	0.116015	Gli2	ENSMUST00000065310.2|1700069B07Rik|ENSMUSG00000053081.2|RIKEN cDNA 1700069B07 gene
mm10_v2_chr7_+_141327840_141327888	0.115817	Gli2	ENSMUST00000126510.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80 	ENSMUST00000145184.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80
mm10_v2_chr4_+_155831272_155831351	0.102209	Gli2	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chrX_-_9662950_9663003	0.0956676	Gli2	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr11_-_42000532_42000592	0.0899998	Gli2	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr4_+_155831630_155831698	0.0813916	Gli2	ENSMUST00000105592.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000105591.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr4_-_126256226_126256370	0.0811209	Gli2	ENSMUST00000122129.1|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000061143.8|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000106132.2|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1
mm10_v2_chr11_-_68871848_68871858	0.0765033	Gli2	ENSMUST00000101017.2|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr7_-_65371210_65371287	0.073902	Gli2	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr17_-_25497288_25497288	0.0682462	Gli2	ENSMUST00000165183.2|Sstr5|ENSMUSG00000050824.5|somatostatin receptor 5 	ENSMUST00000051864.4|Sstr5|ENSMUSG00000050824.5|somatostatin receptor 5
mm10_v2_chr2_-_120609319_120609380	0.0588614	Gli2	ENSMUST00000102497.3|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr10_-_99126321_99126321	0.0543106	Gli2	ENSMUST00000060761.5|Phxr2|ENSMUSG00000055108.5|per-hexamer repeat gene 2
mm10_v2_chr1_-_51915968_51916071	0.0542512	Gli2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_-_120609500_120609524	0.0420816	Gli2	ENSMUST00000133612.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102498.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57 	ENSMUST00000102499.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr2_-_120609283_120609317	0.0357879	Gli2	ENSMUST00000102496.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr4_-_19708922_19709004	0.0186691	Gli2	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr5_-_24527276_24527276	0.0178742	Gli2	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chr4_+_121039385_121039385	0.0169891	Gli2	ENSMUST00000030372.5|Col9a2|ENSMUSG00000028626.5|collagen, type IX, alpha 2
mm10_v2_chr16_-_20302358_20302401	0.00828311	Gli2	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chr14_+_64950037_64950056	0.00315428	Gli2	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr4_+_117096049_117096083	0.00219401	Gli2	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chr11_-_42000284_42000356	0.000456204	Gli2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
