mm10_v2_chr6_+_15196949_15197102	0.847638	Hoxa6	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr11_+_77930800_77931012	0.69931	Hoxa6	ENSMUST00000093995.3|Sez6|ENSMUSG00000000632.7|seizure related gene 6 	ENSMUST00000000646.7|Sez6|ENSMUSG00000000632.7|seizure related gene 6
mm10_v2_chr9_+_120929216_120929251	0.446446	Hoxa6	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr6_+_15185456_15185563	0.379234	Hoxa6	ENSMUST00000115472.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115474.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000031545.7|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000137628.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr4_+_11579647_11579674	0.342036	Hoxa6	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr15_-_79285470_79285498	0.333096	Hoxa6	ENSMUST00000170955.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr8_-_84773381_84773427	0.310711	Hoxa6	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr15_-_79285502_79285537	0.306285	Hoxa6	ENSMUST00000165408.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr1_-_165934900_165935036	0.29622	Hoxa6	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr4_-_82885148_82885148	0.286557	Hoxa6	ENSMUST00000048430.3|Cer1|ENSMUSG00000038192.5|cerberus 1 homolog (Xenopus laevis)
mm10_v2_chr19_-_53371766_53371766	0.286077	Hoxa6	ENSMUST00000086887.1|Gm10197|ENSMUSG00000067085.1|predicted gene 10197
mm10_v2_chr13_-_28953690_28953713	0.278935	Hoxa6	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr2_-_28916412_28916440	0.276734	Hoxa6	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr18_-_47368446_47368486	0.272886	Hoxa6	ENSMUST00000076043.6|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000135790.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr13_-_40730416_40730429	0.272308	Hoxa6	ENSMUST00000021787.5|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr1_+_187997835_187997882	0.257743	Hoxa6	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_+_187997821_187997834	0.246358	Hoxa6	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_-_87394721_87394734	0.245978	Hoxa6	ENSMUST00000113212.3|Kcnj13|ENSMUSG00000079436.3|potassium inwardly-rectifying channel, subfamily J, member 13
mm10_v2_chr2_+_72297895_72297912	0.243492	Hoxa6	ENSMUST00000144111.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chrX_-_162964557_162964599	0.236114	Hoxa6	ENSMUST00000038769.2|S100g|ENSMUSG00000040808.4|S100 calcium binding protein G
mm10_v2_chr2_+_181767040_181767073	0.234444	Hoxa6	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr11_+_96286623_96286653	0.229505	Hoxa6	ENSMUST00000049352.7|Hoxb7|ENSMUSG00000038721.8|homeobox B7
mm10_v2_chr14_-_118052235_118052253	0.228923	Hoxa6	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr1_+_66322102_66322119	0.227744	Hoxa6	ENSMUST00000123647.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr16_+_7069825_7069846	0.225995	Hoxa6	ENSMUST00000056416.7|Rbfox1|ENSMUSG00000008658.9|RNA binding protein, fox-1 homolog (C. elegans) 1
mm10_v2_chr3_+_68572245_68572392	0.217179	Hoxa6	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr10_+_88091070_88091076	0.21408	Hoxa6	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr2_-_33086366_33086447	0.203171	Hoxa6	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr12_-_54986328_54986342	0.200977	Hoxa6	ENSMUST00000038926.6|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A
mm10_v2_chr11_+_78826575_78826618	0.200216	Hoxa6	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr2_-_28916668_28916668	0.192895	Hoxa6	ENSMUST00000113847.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr8_-_36953139_36953160	0.192565	Hoxa6	ENSMUST00000179501.1|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr1_+_6730135_6730176	0.183195	Hoxa6	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr15_-_8710409_8710498	0.181442	Hoxa6	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr12_-_54986363_54986529	0.181346	Hoxa6	ENSMUST00000173433.1|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A 	ENSMUST00000173803.1|Gm20403|ENSMUSG00000092233.1|predicted gene 20403
mm10_v2_chr4_-_91399984_91400007	0.177953	Hoxa6	ENSMUST00000102799.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr5_-_106574706_106574727	0.17535	Hoxa6	ENSMUST00000131029.1|RP24-421H18.1|ENSMUSG00000099061.1|RP24-421H18.1	ENSMUST00000124394.2|RP24-421H18.1|ENSMUSG00000099061.1|RP24-421H18.1
mm10_v2_chr13_-_103764502_103764505	0.174779	Hoxa6	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chr16_-_92400067_92400083	0.170078	Hoxa6	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr5_-_48889531_48889557	0.168555	Hoxa6	ENSMUST00000176978.1|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr3_+_84952146_84952186	0.167923	Hoxa6	ENSMUST00000029727.7|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr1_-_12991109_12991177	0.163955	Hoxa6	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr2_+_181767283_181767322	0.161242	Hoxa6	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr4_+_99295900_99295900	0.15597	Hoxa6	ENSMUST00000094955.1|Gm12689|ENSMUSG00000070891.1|predicted gene 12689
mm10_v2_chr5_+_115235836_115235836	0.155963	Hoxa6	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr13_+_83504032_83504050	0.151842	Hoxa6	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr6_+_15185439_15185452	0.149381	Hoxa6	ENSMUST00000118133.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chrM_+_7005_7022	0.134296	Hoxa6	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr12_-_34528844_34528904	0.133603	Hoxa6	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr9_-_29963112_29963141	0.133379	Hoxa6	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr17_-_44814649_44814797	0.133001	Hoxa6	ENSMUST00000113571.3|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr19_-_28911879_28911879	0.129315	Hoxa6	ENSMUST00000179171.1|AC163993.1|ENSMUSG00000095556.1|AC163993.1
mm10_v2_chr4_+_13751297_13751358	0.12777	Hoxa6	ENSMUST00000105566.2|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr13_-_97747399_97747414	0.126653	Hoxa6	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr9_-_60141220_60141246	0.121904	Hoxa6	ENSMUST00000034829.5|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr15_-_56694525_56694554	0.12058	Hoxa6	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chrM_+_8600_8616	0.118381	Hoxa6	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr7_+_49910112_49910146	0.116383	Hoxa6	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr1_-_163313661_163313710	0.114285	Hoxa6	ENSMUST00000174397.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000075805.6|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000027878.7|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr1_+_132191436_132191436	0.106489	Hoxa6	ENSMUST00000112357.2|Lemd1|ENSMUSG00000079330.2|LEM domain containing 1
mm10_v2_chr1_+_6730051_6730117	0.105408	Hoxa6	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr2_+_138278481_138278531	0.104871	Hoxa6	ENSMUST00000075410.4|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr13_+_44840686_44840697	0.104625	Hoxa6	ENSMUST00000173906.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr4_-_88033328_88033373	0.103262	Hoxa6	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr13_+_55399648_55399700	0.103052	Hoxa6	ENSMUST00000057167.7|Slc34a1|ENSMUSG00000021490.10|solute carrier family 34 (sodium phosphate), member 1
mm10_v2_chr6_+_34709610_34709635	0.102916	Hoxa6	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr1_+_6734827_6734874	0.10249	Hoxa6	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr18_+_69593361_69593450	0.102347	Hoxa6	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr3_-_138131356_138131381	0.101833	Hoxa6	ENSMUST00000029805.8|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr10_-_42583628_42583639	0.100152	Hoxa6	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr5_+_118169712_118169748	0.098641	Hoxa6	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr2_+_79707780_79707927	0.0979973	Hoxa6	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr9_-_40346290_40346337	0.0976517	Hoxa6	ENSMUST00000121357.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr2_-_7081207_7081248	0.0969511	Hoxa6	ENSMUST00000114923.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182706.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr10_-_40302186_40302206	0.0964568	Hoxa6	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr2_-_7395968_7396011	0.095965	Hoxa6	ENSMUST00000002176.6|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr6_+_29859686_29859710	0.0955789	Hoxa6	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr1_+_66321708_66321719	0.094607	Hoxa6	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr6_-_145865302_145865412	0.0937609	Hoxa6	ENSMUST00000111703.1|Bhlhe41|ENSMUSG00000030256.5|basic helix-loop-helix family, member e41
mm10_v2_chr6_+_29859662_29859685	0.0914967	Hoxa6	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chrM_+_5319_5333	0.0904005	Hoxa6	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr11_+_94044111_94044121	0.087707	Hoxa6	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr6_-_52165413_52165413	0.0865423	Hoxa6	ENSMUST00000014848.8|Hoxa2|ENSMUSG00000014704.8|homeobox A2
mm10_v2_chr12_+_29528382_29528468	0.0863599	Hoxa6	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr6_+_34598500_34598529	0.0849838	Hoxa6	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_-_67818218_67818269	0.0844861	Hoxa6	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr3_-_26133734_26133734	0.0830414	Hoxa6	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr11_+_96292453_96292508	0.0827259	Hoxa6	ENSMUST00000173432.1|Hoxb6|ENSMUSG00000000690.4|homeobox B6
mm10_v2_chr10_+_18469958_18469981	0.0826866	Hoxa6	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr6_+_34598530_34598587	0.0811891	Hoxa6	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_+_120232921_120232952	0.0770681	Hoxa6	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr9_+_44398176_44398176	0.0750549	Hoxa6	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr2_-_7081256_7081318	0.0744678	Hoxa6	ENSMUST00000183209.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr17_-_44814604_44814637	0.0731233	Hoxa6	ENSMUST00000160673.1|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr10_-_6980376_6980398	0.0728066	Hoxa6	ENSMUST00000105617.1|Ipcef1|ENSMUSG00000064065.9|interaction protein for cytohesin exchange factors 1
mm10_v2_chr2_+_132847719_132847743	0.072635	Hoxa6	ENSMUST00000124836.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000154160.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr11_+_96282529_96282556	0.0721031	Hoxa6	ENSMUST00000125410.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr17_-_44814581_44814595	0.071847	Hoxa6	ENSMUST00000159943.1|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr11_+_96024540_96024558	0.0711356	Hoxa6	ENSMUST00000103157.3|Gip|ENSMUSG00000014351.6|gastric inhibitory polypeptide
mm10_v2_chrM_+_7759_7927	0.070185	Hoxa6	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr9_+_32116040_32116136	0.0699381	Hoxa6	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr8_-_8639363_8639363	0.0685923	Hoxa6	ENSMUST00000152698.1|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr16_+_43364145_43364204	0.0669204	Hoxa6	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr9_-_112187898_112187938	0.0650182	Hoxa6	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chrM_+_2743_2761	0.064846	Hoxa6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr19_-_14597983_14598016	0.0645251	Hoxa6	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr10_-_45470201_45470260	0.0637322	Hoxa6	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr5_+_89027959_89027967	0.0619711	Hoxa6	ENSMUST00000130041.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr6_+_34709442_34709497	0.0595222	Hoxa6	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_-_19018956_19018973	0.0591754	Hoxa6	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr2_+_125152505_125152606	0.057674	Hoxa6	ENSMUST00000110494.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000028630.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000110495.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1
mm10_v2_chr4_+_128688726_128688795	0.0568188	Hoxa6	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr11_+_96323253_96323326	0.0553881	Hoxa6	ENSMUST00000093944.3|Hoxb3|ENSMUSG00000048763.5|homeobox B3
mm10_v2_chr15_+_28203726_28203752	0.0549742	Hoxa6	ENSMUST00000067048.6|Dnah5|ENSMUSG00000022262.7|dynein, axonemal, heavy chain 5
mm10_v2_chr9_-_32541589_32541602	0.0543144	Hoxa6	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr9_-_112187766_112187862	0.0533092	Hoxa6	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr12_-_86892540_86892569	0.0522612	Hoxa6	ENSMUST00000181290.1|Gm26698|ENSMUSG00000097208.1|predicted gene, 26698
mm10_v2_chr2_-_7396192_7396241	0.0522498	Hoxa6	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr5_-_147307264_147307281	0.0514454	Hoxa6	ENSMUST00000031650.3|Cdx2|ENSMUSG00000029646.3|caudal type homeobox 2
mm10_v2_chr2_-_6884975_6884996	0.0504962	Hoxa6	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_-_6884940_6884957	0.0496296	Hoxa6	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_+_74697663_74697680	0.0494135	Hoxa6	ENSMUST00000059272.8|Hoxd9|ENSMUSG00000043342.8|homeobox D9
mm10_v2_chr8_+_58911755_58911755	0.0489825	Hoxa6	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr16_-_56024628_56024668	0.0468408	Hoxa6	ENSMUST00000119981.1|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein 	ENSMUST00000096021.3|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein
mm10_v2_chr19_-_14598031_14598088	0.0466832	Hoxa6	ENSMUST00000167776.2|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr16_+_43363855_43363888	0.0456777	Hoxa6	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr18_-_54990124_54990180	0.0449581	Hoxa6	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr10_+_127420867_127420916	0.0449389	Hoxa6	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr10_-_116549101_116549163	0.0440682	Hoxa6	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chrM_+_10167_10167	0.0429435	Hoxa6	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr6_-_144209471_144209487	0.0424032	Hoxa6	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_79456750_79456761	0.042022	Hoxa6	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr11_-_42000532_42000592	0.0419334	Hoxa6	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr7_-_70366735_70366771	0.0409235	Hoxa6	ENSMUST00000089565.5|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr9_-_32542861_32543008	0.0407802	Hoxa6	ENSMUST00000183767.1|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chrX_-_88115632_88115675	0.0403332	Hoxa6	ENSMUST00000113966.1|Il1rapl1|ENSMUSG00000052372.4|interleukin 1 receptor accessory protein-like 1 	ENSMUST00000113964.1|Il1rapl1|ENSMUSG00000052372.4|interleukin 1 receptor accessory protein-like 1
mm10_v2_chr14_+_63992425_63992443	0.0378015	Hoxa6	ENSMUST00000058229.4|Rp1l1|ENSMUSG00000046049.6|retinitis pigmentosa 1 homolog (human)-like 1
mm10_v2_chr18_-_13972617_13972733	0.0362773	Hoxa6	ENSMUST00000025288.7|Zfp521|ENSMUSG00000024420.8|zinc finger protein 521
mm10_v2_chr1_-_30863256_30863256	0.035976	Hoxa6	ENSMUST00000088310.3|Phf3|ENSMUSG00000048874.9|PHD finger protein 3
mm10_v2_chr2_+_74727074_74727201	0.0342406	Hoxa6	ENSMUST00000111980.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr1_-_166002613_166002678	0.034191	Hoxa6	ENSMUST00000177358.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000160908.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000027850.8|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000160260.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr10_-_13388830_13388970	0.0335679	Hoxa6	ENSMUST00000079698.5|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr6_-_99044414_99044459	0.0332272	Hoxa6	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr9_-_77045788_77045824	0.0331991	Hoxa6	ENSMUST00000034911.6|Tinag|ENSMUSG00000032357.6|tubulointerstitial nephritis antigen
mm10_v2_chr15_-_77153772_77153817	0.0322102	Hoxa6	ENSMUST00000166610.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000111581.2|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr2_-_148038270_148038299	0.0318688	Hoxa6	ENSMUST00000132070.1|9030622O22Rik|ENSMUSG00000086141.1|RIKEN cDNA 9030622O22 gene
mm10_v2_chr4_-_14621805_14621819	0.0317973	Hoxa6	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr11_-_19018714_19018828	0.0309959	Hoxa6	ENSMUST00000177417.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr2_-_45112890_45113010	0.0307896	Hoxa6	ENSMUST00000076836.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr5_-_6876523_6876523	0.0305577	Hoxa6	ENSMUST00000164784.1|Zfp804b|ENSMUSG00000092094.1|zinc finger protein 804B
mm10_v2_chr3_-_37125943_37125969	0.0301146	Hoxa6	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr6_-_144209448_144209469	0.0298725	Hoxa6	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr1_-_25228814_25228834	0.0295281	Hoxa6	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr6_-_144209558_144209647	0.0288566	Hoxa6	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr6_-_97459279_97459303	0.0283443	Hoxa6	ENSMUST00000113359.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr10_+_90576570_90576668	0.0281888	Hoxa6	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_-_30198232_30198261	0.0277292	Hoxa6	ENSMUST00000102838.3|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr4_+_101507947_101508032	0.027142	Hoxa6	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr19_+_27322539_27322592	0.0269217	Hoxa6	ENSMUST00000056708.3|Kcnv2|ENSMUSG00000047298.3|potassium channel, subfamily V, member 2
mm10_v2_chr2_-_7395879_7395912	0.0266387	Hoxa6	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr10_+_90576252_90576517	0.0261048	Hoxa6	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_+_96316684_96316684	0.0256846	Hoxa6	ENSMUST00000049241.7|Hoxb4|ENSMUSG00000038692.7|homeobox B4
mm10_v2_chr12_-_31713873_31713947	0.0245773	Hoxa6	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr6_-_119963733_119963836	0.0241059	Hoxa6	ENSMUST00000161512.2|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr1_+_104768510_104768529	0.0237177	Hoxa6	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr7_-_116038734_116038750	0.0235252	Hoxa6	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr8_-_47352348_47352367	0.0230254	Hoxa6	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr4_-_49408042_49408151	0.0226013	Hoxa6	ENSMUST00000081541.2|Acnat2|ENSMUSG00000060317.3|acyl-coenzyme A amino acid N-acyltransferase 2
mm10_v2_chr7_-_115824699_115824752	0.0215406	Hoxa6	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr5_-_66080971_66081009	0.0214041	Hoxa6	ENSMUST00000127275.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47 	ENSMUST00000113724.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr11_-_42000834_42000867	0.0203556	Hoxa6	ENSMUST00000070725.4|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr1_+_177445660_177445821	0.0202352	Hoxa6	ENSMUST00000077225.6|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr11_+_94044194_94044238	0.0200072	Hoxa6	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr19_+_22692613_22692630	0.0197704	Hoxa6	ENSMUST00000099564.2|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3 	ENSMUST00000099566.3|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr2_-_168207063_168207142	0.019142	Hoxa6	ENSMUST00000088001.5|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr11_+_94044241_94044273	0.0185967	Hoxa6	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr4_+_101507855_101507871	0.0185154	Hoxa6	ENSMUST00000038207.5|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr6_-_16898441_16898459	0.0185101	Hoxa6	ENSMUST00000031533.7|Tfec|ENSMUSG00000029553.7|transcription factor EC
mm10_v2_chr10_+_90576678_90576691	0.0178355	Hoxa6	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_+_42067960_42067960	0.0176538	Hoxa6	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr15_-_8710734_8710764	0.0173639	Hoxa6	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr10_+_102159000_102159079	0.0172337	Hoxa6	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr9_-_105521147_105521265	0.0168312	Hoxa6	ENSMUST00000176770.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000085133.6|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr9_+_118478182_118478212	0.0158236	Hoxa6	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr11_-_96747405_96747416	0.0156782	Hoxa6	ENSMUST00000180492.1|2010300F17Rik|ENSMUSG00000097289.1|RIKEN cDNA 2010300F17 gene
mm10_v2_chr10_+_90576708_90576766	0.0149208	Hoxa6	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr16_+_43247278_43247309	0.0145965	Hoxa6	ENSMUST00000114691.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000079441.6|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chrX_-_43274786_43274786	0.0145413	Hoxa6	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr16_+_43503607_43503642	0.0144103	Hoxa6	ENSMUST00000126100.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000123047.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000156981.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr2_+_61804453_61804538	0.014386	Hoxa6	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr10_-_20724696_20724849	0.0139848	Hoxa6	ENSMUST00000170265.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr9_-_42399915_42399929	0.0130371	Hoxa6	ENSMUST00000042190.7|Tecta|ENSMUSG00000037705.7|tectorin alpha
mm10_v2_chr15_+_92597104_92597121	0.0121296	Hoxa6	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr2_-_168767029_168767104	0.0117243	Hoxa6	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr11_+_94044331_94044365	0.0111552	Hoxa6	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr9_-_42399709_42399727	0.0109331	Hoxa6	ENSMUST00000160940.1|Tecta|ENSMUSG00000037705.7|tectorin alpha
mm10_v2_chr4_-_120815703_120815761	0.00983311	Hoxa6	ENSMUST00000120779.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma
mm10_v2_chr2_-_168206875_168206922	0.00902975	Hoxa6	ENSMUST00000057793.4|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr11_+_31872100_31872226	0.00886384	Hoxa6	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr15_+_79690869_79690905	0.00869956	Hoxa6	ENSMUST00000046463.8|Gtpbp1|ENSMUSG00000042535.8|GTP binding protein 1
mm10_v2_chr15_+_10952332_10952364	0.0070537	Hoxa6	ENSMUST00000022853.8|C1qtnf3|ENSMUSG00000058914.6|C1q and tumor necrosis factor related protein 3 	ENSMUST00000110523.1|C1qtnf3|ENSMUSG00000058914.6|C1q and tumor necrosis factor related protein 3
mm10_v2_chr10_+_90576777_90576815	0.00689668	Hoxa6	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr4_-_83021102_83021135	0.00613013	Hoxa6	ENSMUST00000071708.5|Frem1|ENSMUSG00000059049.8|Fras1 related extracellular matrix protein 1
mm10_v2_chr1_+_40580227_40580302	0.00612849	Hoxa6	ENSMUST00000027233.7|Slc9a4|ENSMUSG00000026065.7|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm10_v2_chr5_+_89028035_89028096	0.00531391	Hoxa6	ENSMUST00000113216.2|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4 	ENSMUST00000134303.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr1_+_177444653_177444669	0.0046882	Hoxa6	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr11_+_96282648_96282725	0.00458764	Hoxa6	ENSMUST00000168043.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr19_+_26749726_26749877	0.00441019	Hoxa6	ENSMUST00000175842.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr10_-_92164666_92164754	0.00437296	Hoxa6	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr2_-_36104060_36104073	0.00381649	Hoxa6	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chr13_+_63014934_63014934	0.00329686	Hoxa6	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr16_-_95586585_95586595	0.00324995	Hoxa6	ENSMUST00000077773.6|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm10_v2_chr14_-_93888732_93888732	0.00307779	Hoxa6	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr9_-_71163224_71163293	0.00305926	Hoxa6	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr11_+_100320596_100320708	0.00305064	Hoxa6	ENSMUST00000152521.1|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr16_-_56712825_56712976	0.00284927	Hoxa6	ENSMUST00000136394.1|Tfg|ENSMUSG00000022757.12|Trk-fused gene
mm10_v2_chr3_-_146770218_146770261	0.00241466	Hoxa6	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr5_+_149678224_149678241	0.00230099	Hoxa6	ENSMUST00000100404.3|B3galtl|ENSMUSG00000051950.8|beta 1,3-galactosyltransferase-like
mm10_v2_chr7_-_37772868_37772891	0.00171352	Hoxa6	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr4_-_129378116_129378116	0.000933125	Hoxa6	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr6_-_138426735_138426816	0.000807002	Hoxa6	ENSMUST00000162932.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr14_+_28511344_28511405	0.000362903	Hoxa6	ENSMUST00000112272.1|Wnt5a|ENSMUSG00000021994.8|wingless-related MMTV integration site 5A
