mm10_v2_chr4_-_137118135_137118165	1.02839	Hoxc9	ENSMUST00000154285.1|Gm13001|ENSMUSG00000087417.1|predicted gene 13001
mm10_v2_chr5_+_20702129_20702277	0.706158	Hoxc9	ENSMUST00000101556.4|Magi2|ENSMUSG00000073174.4|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chrX_+_49463926_49463973	0.643499	Hoxc9	ENSMUST00000130558.1|Arhgap36|ENSMUSG00000036198.6|Rho GTPase activating protein 36
mm10_v2_chr7_+_131032061_131032076	0.574779	Hoxc9	ENSMUST00000084509.3|Dmbt1|ENSMUSG00000047517.9|deleted in malignant brain tumors 1
mm10_v2_chr1_-_45503282_45503282	0.509263	Hoxc9	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr11_-_100193246_100193256	0.476744	Hoxc9	ENSMUST00000059707.2|Krt9|ENSMUSG00000051617.3|keratin 9
mm10_v2_chr2_+_91082362_91082390	0.436093	Hoxc9	ENSMUST00000169852.1|Spi1|ENSMUSG00000002111.8|spleen focus forming virus (SFFV) proviral integration oncogene
mm10_v2_chr11_+_98664341_98664356	0.410154	Hoxc9	ENSMUST00000017348.2|Gsdma|ENSMUSG00000017204.4|gasdermin A
mm10_v2_chr4_+_136143497_136143497	0.40121	Hoxc9	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr18_+_82855894_82855898	0.336318	Hoxc9	ENSMUST00000181345.1|4930445N18Rik|ENSMUSG00000097738.1|RIKEN cDNA 4930445N18 gene 	ENSMUST00000180631.1|4930445N18Rik|ENSMUSG00000097738.1|RIKEN cDNA 4930445N18 gene
mm10_v2_chr4_+_100776664_100776692	0.327494	Hoxc9	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chr4_+_33924632_33924651	0.27199	Hoxc9	ENSMUST00000057188.6|Cnr1|ENSMUSG00000044288.6|cannabinoid receptor 1 (brain)
mm10_v2_chr17_-_57000018_57000018	0.261421	Hoxc9	ENSMUST00000002740.2|Pspn|ENSMUSG00000002664.2|persephin
mm10_v2_chr4_+_150997081_150997097	0.259913	Hoxc9	ENSMUST00000030803.1|Uts2|ENSMUSG00000028963.1|urotensin 2
mm10_v2_chr8_+_54954728_54954820	0.232525	Hoxc9	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr13_+_94083490_94083511	0.192311	Hoxc9	ENSMUST00000156071.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr13_+_58281183_58281196	0.176753	Hoxc9	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr5_+_102768771_102768815	0.150558	Hoxc9	ENSMUST00000112852.1|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr11_-_101894355_101894374	0.140351	Hoxc9	ENSMUST00000057054.7|Meox1|ENSMUSG00000001493.9|mesenchyme homeobox 1
mm10_v2_chr1_+_60909148_60909171	0.128617	Hoxc9	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chrX_+_56609751_56609797	0.124941	Hoxc9	ENSMUST00000144068.1|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chr8_+_118283719_118283738	0.112629	Hoxc9	ENSMUST00000117160.1|Cdh13|ENSMUSG00000031841.12|cadherin 13
mm10_v2_chr6_-_99044414_99044459	0.108733	Hoxc9	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr2_+_4300462_4300522	0.1078	Hoxc9	ENSMUST00000175669.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr6_-_55133014_55133029	0.107665	Hoxc9	ENSMUST00000003568.8|Crhr2|ENSMUSG00000003476.9|corticotropin releasing hormone receptor 2
mm10_v2_chr8_-_120228221_120228297	0.105958	Hoxc9	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr6_+_125145235_125145251	0.105294	Hoxc9	ENSMUST00000119527.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000088276.6|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000051171.7|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000117675.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1
mm10_v2_chr12_-_15816762_15816881	0.0984354	Hoxc9	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr14_+_80000292_80000309	0.0974783	Hoxc9	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chrX_-_141474034_141474091	0.0909845	Hoxc9	ENSMUST00000101205.2|Col4a6|ENSMUSG00000031273.10|collagen, type IV, alpha 6
mm10_v2_chr18_+_65582390_65582613	0.0810347	Hoxc9	ENSMUST00000169679.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183326.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr5_-_67427794_67427813	0.078123	Hoxc9	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr10_+_5593718_5593739	0.0766118	Hoxc9	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr1_+_60908993_60909033	0.0756832	Hoxc9	ENSMUST00000027164.2|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr10_+_52391606_52391610	0.073803	Hoxc9	ENSMUST00000067085.4|Nepn|ENSMUSG00000038624.11|nephrocan
mm10_v2_chr15_-_55113460_55113582	0.0728727	Hoxc9	ENSMUST00000100659.2|Gm9920|ENSMUSG00000053749.6|predicted gene 9920 	ENSMUST00000110230.1|Gm9920|ENSMUSG00000053749.6|predicted gene 9920
mm10_v2_chr4_+_144893127_144893151	0.0725193	Hoxc9	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_-_109202217_109202272	0.0692133	Hoxc9	ENSMUST00000160774.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000030288.7|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000162787.2|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr13_+_113209659_113209772	0.0678293	Hoxc9	ENSMUST00000038144.8|Esm1|ENSMUSG00000042379.8|endothelial cell-specific molecule 1
mm10_v2_chr2_+_126034967_126034980	0.0643244	Hoxc9	ENSMUST00000110442.1|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chrX_-_18461371_18461402	0.0589639	Hoxc9	ENSMUST00000044188.4|4930578C19Rik|ENSMUSG00000037358.6|RIKEN cDNA 4930578C19 gene
mm10_v2_chr2_+_91256144_91256170	0.0587614	Hoxc9	ENSMUST00000154959.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000059566.4|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr11_-_98022594_98022671	0.0559178	Hoxc9	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr11_-_94242701_94242729	0.0543776	Hoxc9	ENSMUST00000061469.3|Wfikkn2|ENSMUSG00000044177.4|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm10_v2_chr7_-_139582790_139582808	0.0540009	Hoxc9	ENSMUST00000106095.2|Nkx6-2|ENSMUSG00000041309.11|NK6 homeobox 2
mm10_v2_chr6_+_116650674_116650690	0.0527844	Hoxc9	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chr16_-_37384915_37384931	0.0523504	Hoxc9	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr6_+_52177498_52177498	0.0513168	Hoxc9	ENSMUST00000070587.3|5730596B20Rik|ENSMUSG00000056468.3|RIKEN cDNA 5730596B20 gene
mm10_v2_chr18_+_65582239_65582275	0.050647	Hoxc9	ENSMUST00000182684.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr4_-_150003130_150003149	0.0446249	Hoxc9	ENSMUST00000084117.6|H6pd|ENSMUSG00000028980.8|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm10_v2_chr9_+_35423582_35423589	0.0435249	Hoxc9	ENSMUST00000154652.1|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr2_+_102658640_102658669	0.0423661	Hoxc9	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr1_+_66321708_66321719	0.0398279	Hoxc9	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr17_-_40914350_40914350	0.0389782	Hoxc9	ENSMUST00000166343.1|Glyatl3|ENSMUSG00000091043.1|glycine-N-acyltransferase-like 3
mm10_v2_chr19_+_22448242_22448283	0.0375662	Hoxc9	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr17_-_49564262_49564337	0.0346754	Hoxc9	ENSMUST00000057610.6|Daam2|ENSMUSG00000040260.7|dishevelled associated activator of morphogenesis 2
mm10_v2_chr9_-_7835255_7835255	0.0319528	Hoxc9	ENSMUST00000074246.6|Birc2|ENSMUSG00000057367.6|baculoviral IAP repeat-containing 2
mm10_v2_chr16_-_29946499_29946532	0.0315678	Hoxc9	ENSMUST00000181968.1|Gm26569|ENSMUSG00000097313.1|predicted gene, 26569
mm10_v2_chr9_+_121710389_121710422	0.0311308	Hoxc9	ENSMUST00000035113.9|Deb1|ENSMUSG00000032526.10|differentially expressed in B16F10 1
mm10_v2_chr6_-_119388671_119388739	0.0308993	Hoxc9	ENSMUST00000169744.1|Adipor2|ENSMUSG00000030168.7|adiponectin receptor 2
mm10_v2_chrX_+_56609843_56609864	0.030857	Hoxc9	ENSMUST00000077741.5|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6 	ENSMUST00000114784.2|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chr13_+_89540636_89540678	0.0304012	Hoxc9	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chrX_-_103186618_103186671	0.0289263	Hoxc9	ENSMUST00000121720.1|Nap1l2|ENSMUSG00000082229.1|nucleosome assembly protein 1-like 2
mm10_v2_chr2_+_126034647_126034665	0.0220113	Hoxc9	ENSMUST00000064794.7|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chr5_-_44101668_44101745	0.0182942	Hoxc9	ENSMUST00000087441.4|Prom1|ENSMUSG00000029086.9|prominin 1 	ENSMUST00000074113.6|Prom1|ENSMUSG00000029086.9|prominin 1
mm10_v2_chr4_+_107830958_107830985	0.0127904	Hoxc9	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr5_+_67260696_67260711	0.00792581	Hoxc9	ENSMUST00000161233.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000160352.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr5_+_67260565_67260692	0.00741304	Hoxc9	ENSMUST00000037918.5|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000162543.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr10_-_13324250_13324318	0.0053854	Hoxc9	ENSMUST00000105543.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr16_-_37384940_37384978	0.00498749	Hoxc9	ENSMUST00000114781.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114780.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr1_-_74284636_74284738	0.00443994	Hoxc9	ENSMUST00000178235.1|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein 	ENSMUST00000006462.7|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein
mm10_v2_chr2_-_128967725_128967725	0.00422885	Hoxc9	ENSMUST00000099385.2|Gm10762|ENSMUSG00000074807.2|predicted gene 10762
mm10_v2_chr4_+_137594140_137594274	0.00238689	Hoxc9	ENSMUST00000105840.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000055131.6|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105839.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105838.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48
mm10_v2_chr1_+_74284930_74285072	0.000730523	Hoxc9	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
