mm10_v2_chr6_+_78370877_78370892	2.89142	Nkx2-9	ENSMUST00000096904.3|Reg3b|ENSMUSG00000071356.5|regenerating islet-derived 3 beta
mm10_v2_chr6_-_78468863_78468878	2.00938	Nkx2-9	ENSMUST00000032089.2|Reg3g|ENSMUSG00000030017.2|regenerating islet-derived 3 gamma
mm10_v2_chr6_+_78380700_78380715	1.6097	Nkx2-9	ENSMUST00000101272.1|Reg3a|ENSMUSG00000079516.1|regenerating islet-derived 3 alpha
mm10_v2_chr6_-_78378851_78378865	1.37197	Nkx2-9	ENSMUST00000089667.1|Reg3d|ENSMUSG00000068341.2|regenerating islet-derived 3 delta 	ENSMUST00000167492.1|Reg3d|ENSMUSG00000068341.2|regenerating islet-derived 3 delta
mm10_v2_chr2_-_129699833_129699850	1.24888	Nkx2-9	ENSMUST00000028883.5|Pdyn|ENSMUSG00000027400.5|prodynorphin
mm10_v2_chr13_-_71963713_71963729	1.14362	Nkx2-9	ENSMUST00000077337.8|Irx1|ENSMUSG00000060969.8|Iroquois related homeobox 1 (Drosophila)
mm10_v2_chr3_+_138277489_138277495	0.991678	Nkx2-9	ENSMUST00000004232.9|Adh1|ENSMUSG00000074207.4|alcohol dehydrogenase 1 (class I)
mm10_v2_chr4_+_136247932_136248011	0.754401	Nkx2-9	ENSMUST00000102533.4|Tcea3|ENSMUSG00000001604.8|transcription elongation factor A (SII), 3 	ENSMUST00000143942.1|Tcea3|ENSMUSG00000001604.8|transcription elongation factor A (SII), 3
mm10_v2_chr5_-_93045022_93045064	0.65032	Nkx2-9	ENSMUST00000061328.5|Sowahb|ENSMUSG00000045314.5|sosondowah ankyrin repeat domain family member B
mm10_v2_chr6_-_40999479_40999498	0.569386	Nkx2-9	ENSMUST00000166306.1|Gm2663|ENSMUSG00000096525.1|predicted gene 2663
mm10_v2_chr6_+_41354105_41354185	0.557639	Nkx2-9	ENSMUST00000072103.5|Try10|ENSMUSG00000071521.3|trypsin 10
mm10_v2_chr9_+_98490522_98490537	0.524882	Nkx2-9	ENSMUST00000035029.2|Rbp2|ENSMUSG00000032454.3|retinol binding protein 2, cellular
mm10_v2_chr11_+_29692937_29692997	0.508944	Nkx2-9	ENSMUST00000102843.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000102842.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000078830.4|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000170731.1|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr11_-_31824463_31824480	0.445271	Nkx2-9	ENSMUST00000129425.1|D630024D03Rik|ENSMUSG00000085772.1|RIKEN cDNA D630024D03 gene 	ENSMUST00000126265.1|D630024D03Rik|ENSMUSG00000085772.1|RIKEN cDNA D630024D03 gene
mm10_v2_chr13_+_72632597_72632625	0.428661	Nkx2-9	ENSMUST00000172353.1|Irx2|ENSMUSG00000001504.9|Iroquois related homeobox 2 (Drosophila)
mm10_v2_chr13_-_92131494_92131680	0.414568	Nkx2-9	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr7_-_126676357_126676383	0.408224	Nkx2-9	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr6_+_145121727_145121748	0.374089	Nkx2-9	ENSMUST00000032396.6|Lrmp|ENSMUSG00000030263.7|lymphoid-restricted membrane protein
mm10_v2_chr6_-_66896521_66896521	0.369699	Nkx2-9	ENSMUST00000065878.3|4930597O21Rik|ENSMUSG00000053442.3|RIKEN cDNA 4930597O21 gene
mm10_v2_chr17_+_69969073_69969086	0.364982	Nkx2-9	ENSMUST00000133983.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chrX_-_95658416_95658509	0.343666	Nkx2-9	ENSMUST00000044382.6|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chr11_-_99493112_99493137	0.316319	Nkx2-9	ENSMUST00000006969.7|Krt23|ENSMUSG00000006777.7|keratin 23
mm10_v2_chr10_-_125328957_125328968	0.305412	Nkx2-9	ENSMUST00000063318.2|Slc16a7|ENSMUSG00000020102.8|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm10_v2_chr8_+_94377911_94377938	0.303915	Nkx2-9	ENSMUST00000159142.1|Gm15889|ENSMUSG00000089712.1|predicted gene 15889
mm10_v2_chrX_-_95658392_95658412	0.300483	Nkx2-9	ENSMUST00000120620.1|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chr3_+_96670131_96670131	0.299519	Nkx2-9	ENSMUST00000048427.5|Ankrd35|ENSMUSG00000038354.7|ankyrin repeat domain 35
mm10_v2_chr16_+_30065333_30065351	0.298559	Nkx2-9	ENSMUST00000023171.7|Hes1|ENSMUSG00000022528.7|hairy and enhancer of split 1 (Drosophila)
mm10_v2_chr5_+_141856692_141856787	0.295912	Nkx2-9	ENSMUST00000074546.6|Sdk1|ENSMUSG00000039683.10|sidekick homolog 1 (chicken)
mm10_v2_chr9_+_74861888_74861921	0.269712	Nkx2-9	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr5_-_43235352_43235352	0.263101	Nkx2-9	ENSMUST00000140650.2|Gm7854|ENSMUSG00000085720.2|predicted gene 7854
mm10_v2_chrX_-_95658379_95658390	0.260645	Nkx2-9	ENSMUST00000119640.1|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chr11_-_49114874_49114874	0.237161	Nkx2-9	ENSMUST00000109201.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr11_-_100759740_100759754	0.236384	Nkx2-9	ENSMUST00000107361.2|Kcnh4|ENSMUSG00000035355.9|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm10_v2_chr6_+_139621888_139621888	0.222654	Nkx2-9	ENSMUST00000032353.8|Pik3c2g|ENSMUSG00000096062.1|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm10_v2_chrX_+_42149534_42149683	0.222505	Nkx2-9	ENSMUST00000127618.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr6_-_37442095_37442154	0.221226	Nkx2-9	ENSMUST00000041093.5|Creb3l2|ENSMUSG00000038648.5|cAMP responsive element binding protein 3-like 2
mm10_v2_chr11_+_87699897_87699897	0.219268	Nkx2-9	ENSMUST00000040089.4|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr8_-_80880479_80880499	0.210781	Nkx2-9	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr4_-_132884509_132884523	0.21025	Nkx2-9	ENSMUST00000030698.4|Stx12|ENSMUSG00000028879.4|syntaxin 12
mm10_v2_chr14_+_75455957_75455996	0.203167	Nkx2-9	ENSMUST00000164848.1|Siah3|ENSMUSG00000091722.1|seven in absentia homolog 3 (Drosophila)
mm10_v2_chr18_+_77185815_77185879	0.197553	Nkx2-9	ENSMUST00000079618.4|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr12_+_69790288_69790288	0.194779	Nkx2-9	ENSMUST00000021378.3|4930512B01Rik|ENSMUSG00000020992.3|RIKEN cDNA 4930512B01 gene
mm10_v2_chr12_-_55080098_55080121	0.172754	Nkx2-9	ENSMUST00000021406.5|2700097O09Rik|ENSMUSG00000062198.4|RIKEN cDNA 2700097O09 gene
mm10_v2_chr10_+_19934472_19934526	0.17134	Nkx2-9	ENSMUST00000095806.3|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5 	ENSMUST00000120259.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr11_-_106788486_106788532	0.162653	Nkx2-9	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr17_+_34263209_34263256	0.156107	Nkx2-9	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr1_+_59256906_59256907	0.153584	Nkx2-9	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr14_-_46831984_46832057	0.147124	Nkx2-9	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr6_-_142507805_142507962	0.146375	Nkx2-9	ENSMUST00000134191.1|Ldhb|ENSMUSG00000030246.5|lactate dehydrogenase B 	ENSMUST00000032373.5|Ldhb|ENSMUSG00000030246.5|lactate dehydrogenase B
mm10_v2_chr3_+_122419772_122419787	0.145075	Nkx2-9	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr18_+_37513652_37513652	0.143895	Nkx2-9	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr5_-_66004278_66004291	0.14304	Nkx2-9	ENSMUST00000067737.5|9130230L23Rik|ENSMUSG00000054598.7|RIKEN cDNA 9130230L23 gene
mm10_v2_chr3_-_89245159_89245199	0.14208	Nkx2-9	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr8_+_95320440_95320496	0.13916	Nkx2-9	ENSMUST00000162294.1|Tepp|ENSMUSG00000090206.1|testis, prostate and placenta expressed
mm10_v2_chr8_+_95703037_95703063	0.13359	Nkx2-9	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr5_-_45639501_45639525	0.130158	Nkx2-9	ENSMUST00000016023.7|Fam184b|ENSMUSG00000015879.7|family with sequence similarity 184, member B
mm10_v2_chr3_-_89245005_89245031	0.125283	Nkx2-9	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr10_-_89506631_89506658	0.121291	Nkx2-9	ENSMUST00000058126.8|Nr1h4|ENSMUSG00000047638.9|nuclear receptor subfamily 1, group H, member 4 	ENSMUST00000105296.2|Nr1h4|ENSMUSG00000047638.9|nuclear receptor subfamily 1, group H, member 4
mm10_v2_chr12_+_24572276_24572308	0.119648	Nkx2-9	ENSMUST00000085553.5|Grhl1|ENSMUSG00000020656.9|grainyhead-like 1 (Drosophila)
mm10_v2_chr11_-_106788845_106788883	0.118342	Nkx2-9	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr14_+_53665912_53665946	0.116706	Nkx2-9	ENSMUST00000181768.1|Trav3-3|ENSMUSG00000094828.4|T cell receptor alpha variable 3-3
mm10_v2_chr7_+_30280094_30280188	0.114277	Nkx2-9	ENSMUST00000108187.1|Thap8|ENSMUSG00000013928.6|THAP domain containing 8 	ENSMUST00000014072.5|Thap8|ENSMUSG00000013928.6|THAP domain containing 8
mm10_v2_chr2_-_170602017_170602017	0.113677	Nkx2-9	ENSMUST00000062355.1|4930470P17Rik|ENSMUSG00000043583.1|RIKEN cDNA 4930470P17 gene
mm10_v2_chr6_-_101377897_101378016	0.112942	Nkx2-9	ENSMUST00000075994.6|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr18_-_35662180_35662195	0.108121	Nkx2-9	ENSMUST00000025209.4|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24 	ENSMUST00000096573.2|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24
mm10_v2_chr4_-_119190005_119190016	0.105461	Nkx2-9	ENSMUST00000138395.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein 	ENSMUST00000156746.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein
mm10_v2_chr7_-_102018139_102018206	0.103188	Nkx2-9	ENSMUST00000094134.3|Il18bp|ENSMUSG00000070427.3|interleukin 18 binding protein
mm10_v2_chr10_+_63061582_63061618	0.102493	Nkx2-9	ENSMUST00000020266.8|Pbld1|ENSMUSG00000020072.8|phenazine biosynthesis-like protein domain containing 1 	ENSMUST00000178684.1|Pbld1|ENSMUSG00000020072.8|phenazine biosynthesis-like protein domain containing 1
mm10_v2_chr11_+_76902152_76902167	0.100633	Nkx2-9	ENSMUST00000102495.1|Tmigd1|ENSMUSG00000020839.10|transmembrane and immunoglobulin domain containing 1
mm10_v2_chr1_-_192834719_192834719	0.0938183	Nkx2-9	ENSMUST00000057543.2|A730013G03Rik|ENSMUSG00000047384.2|RIKEN cDNA A730013G03 gene
mm10_v2_chr13_-_51567084_51567084	0.0931274	Nkx2-9	ENSMUST00000021898.5|Shc3|ENSMUSG00000021448.6|src homology 2 domain-containing transforming protein C3
mm10_v2_chr5_-_62765618_62765656	0.0895554	Nkx2-9	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr4_-_152152207_152152397	0.0873837	Nkx2-9	ENSMUST00000030785.8|Espn|ENSMUSG00000028943.11|espin 	ENSMUST00000105658.1|Espn|ENSMUSG00000028943.11|espin 	ENSMUST00000105659.2|Espn|ENSMUSG00000028943.11|espin
mm10_v2_chr10_+_21690845_21690845	0.0847586	Nkx2-9	ENSMUST00000071008.3|Gm5420|ENSMUSG00000056716.3|predicted gene 5420
mm10_v2_chr5_+_30105161_30105219	0.0837428	Nkx2-9	ENSMUST00000058045.4|Gareml|ENSMUSG00000044576.6|GRB2 associated, regulator of MAPK1-like
mm10_v2_chrX_+_7899350_7899362	0.0799788	Nkx2-9	ENSMUST00000033498.3|Timm17b|ENSMUSG00000031158.5|translocase of inner mitochondrial membrane 17b
mm10_v2_chr2_+_137663424_137663436	0.0765261	Nkx2-9	ENSMUST00000134833.1|Gm14064|ENSMUSG00000085640.1|predicted gene 14064
mm10_v2_chr2_+_103969528_103969567	0.0749036	Nkx2-9	ENSMUST00000123437.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2 	ENSMUST00000163256.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2
mm10_v2_chr3_-_64410057_64410057	0.0740439	Nkx2-9	ENSMUST00000170280.1|Vmn2r4|ENSMUSG00000092049.2|vomeronasal 2, receptor 4
mm10_v2_chr7_+_4925802_4925868	0.0718066	Nkx2-9	ENSMUST00000057612.7|Ssc5d|ENSMUSG00000035279.7|scavenger receptor cysteine rich domain containing (5 domains)
mm10_v2_chr11_-_106789157_106789192	0.0708071	Nkx2-9	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr1_-_120505084_120505084	0.0706042	Nkx2-9	ENSMUST00000027639.1|Marco|ENSMUSG00000026390.1|macrophage receptor with collagenous structure
mm10_v2_chr11_-_46389454_46389467	0.0698114	Nkx2-9	ENSMUST00000101306.3|Itk|ENSMUSG00000020395.7|IL2 inducible T cell kinase
mm10_v2_chr16_+_24448082_24448153	0.0668215	Nkx2-9	ENSMUST00000078988.2|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chrX_+_135993820_135993820	0.0666647	Nkx2-9	ENSMUST00000058119.7|Arxes2|ENSMUSG00000048040.7|adipocyte-related X-chromosome expressed sequence 2
mm10_v2_chr1_+_60909148_60909171	0.0653886	Nkx2-9	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr17_-_51833278_51833299	0.0646572	Nkx2-9	ENSMUST00000133574.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr5_-_24445254_24445287	0.0625634	Nkx2-9	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr9_-_107770945_107771007	0.0615194	Nkx2-9	ENSMUST00000183248.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182022.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000035199.6|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182659.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5
mm10_v2_chr6_-_6217023_6217125	0.061034	Nkx2-9	ENSMUST00000015256.8|Slc25a13|ENSMUSG00000015112.9|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm10_v2_chr11_-_84068766_84068801	0.059485	Nkx2-9	ENSMUST00000018792.5|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr16_+_36694024_36694038	0.0565089	Nkx2-9	ENSMUST00000119464.1|Ildr1|ENSMUSG00000022900.8|immunoglobulin-like domain containing receptor 1
mm10_v2_chr17_-_25861456_25861510	0.0557117	Nkx2-9	ENSMUST00000079461.8|Wdr90|ENSMUSG00000073434.5|WD repeat domain 90 	ENSMUST00000176923.1|Wdr90|ENSMUSG00000073434.5|WD repeat domain 90
mm10_v2_chr15_-_98777261_98777261	0.0530874	Nkx2-9	ENSMUST00000166022.1|Wnt10b|ENSMUSG00000022996.8|wingless related MMTV integration site 10b
mm10_v2_chr13_-_107890059_107890073	0.0530627	Nkx2-9	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr16_+_43363855_43363888	0.0521823	Nkx2-9	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chrX_+_74297097_74297178	0.0513708	Nkx2-9	ENSMUST00000019231.5|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000147900.1|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000147275.1|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000114171.3|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1
mm10_v2_chr8_-_70700070_70700088	0.0508581	Nkx2-9	ENSMUST00000116172.1|Gm11175|ENSMUSG00000080058.1|predicted gene 11175
mm10_v2_chr2_-_25575224_25575224	0.0502136	Nkx2-9	ENSMUST00000039156.6|Phpt1|ENSMUSG00000036504.6|phosphohistidine phosphatase 1
mm10_v2_chr16_+_36693972_36694000	0.0501656	Nkx2-9	ENSMUST00000023617.6|Ildr1|ENSMUSG00000022900.8|immunoglobulin-like domain containing receptor 1 	ENSMUST00000089618.3|Ildr1|ENSMUSG00000022900.8|immunoglobulin-like domain containing receptor 1
mm10_v2_chr17_-_23954919_23954919	0.0490059	Nkx2-9	ENSMUST00000024939.1|Sbpl|ENSMUSG00000024125.1|spermine binding protein-like
mm10_v2_chr7_-_19665005_19665030	0.0468433	Nkx2-9	ENSMUST00000055242.9|Clptm1|ENSMUSG00000002981.9|cleft lip and palate associated transmembrane protein 1
mm10_v2_chr17_-_38131190_38131190	0.045913	Nkx2-9	ENSMUST00000087128.1|Olfr132|ENSMUSG00000067186.1|olfactory receptor 132
mm10_v2_chrX_-_49788204_49788243	0.0458752	Nkx2-9	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr6_+_66896397_66896479	0.0456481	Nkx2-9	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr5_+_67260565_67260692	0.0430769	Nkx2-9	ENSMUST00000037918.5|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000162543.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr17_+_8434423_8434423	0.0378146	Nkx2-9	ENSMUST00000074667.2|T|ENSMUSG00000062327.4|brachyury
mm10_v2_chr1_+_60977898_60977937	0.0376227	Nkx2-9	ENSMUST00000027162.5|Icos|ENSMUSG00000026009.8|inducible T cell co-stimulator 	ENSMUST00000102827.3|Icos|ENSMUSG00000026009.8|inducible T cell co-stimulator
mm10_v2_chr8_+_105701624_105701693	0.0361309	Nkx2-9	ENSMUST00000093195.6|Pard6a|ENSMUSG00000005699.9|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm10_v2_chr6_+_66896480_66896549	0.0360716	Nkx2-9	ENSMUST00000114222.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr4_-_134853294_134853345	0.0359711	Nkx2-9	ENSMUST00000030628.8|Tmem57|ENSMUSG00000028826.8|transmembrane protein 57
mm10_v2_chr6_-_28126125_28126195	0.0355403	Nkx2-9	ENSMUST00000115324.2|Grm8|ENSMUSG00000024211.9|glutamate receptor, metabotropic 8 	ENSMUST00000090512.3|Grm8|ENSMUSG00000024211.9|glutamate receptor, metabotropic 8
mm10_v2_chr6_+_135362931_135362961	0.0342778	Nkx2-9	ENSMUST00000032330.9|Emp1|ENSMUSG00000030208.9|epithelial membrane protein 1
mm10_v2_chr11_+_108920342_108920358	0.0339285	Nkx2-9	ENSMUST00000052915.7|Axin2|ENSMUSG00000000142.9|axin2
mm10_v2_chr15_+_25414175_25414197	0.0328173	Nkx2-9	ENSMUST00000069992.5|Gm5468|ENSMUSG00000056089.5|predicted gene 5468
mm10_v2_chr16_+_33380765_33380787	0.031358	Nkx2-9	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr2_+_20737306_20737321	0.0291663	Nkx2-9	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr19_+_43752996_43753137	0.0277527	Nkx2-9	ENSMUST00000026199.7|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000112047.3|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000153295.1|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli)
mm10_v2_chrX_+_42149288_42149412	0.0268459	Nkx2-9	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr5_+_67260696_67260711	0.0258442	Nkx2-9	ENSMUST00000161233.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000160352.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr8_-_79399513_79399532	0.0258261	Nkx2-9	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr16_-_35490873_35490891	0.0257667	Nkx2-9	ENSMUST00000023550.7|Pdia5|ENSMUSG00000022844.7|protein disulfide isomerase associated 5
mm10_v2_chr11_+_106789235_106789335	0.0254839	Nkx2-9	ENSMUST00000103068.3|Cep95|ENSMUSG00000018372.7|centrosomal protein 95 	ENSMUST00000018516.4|Cep95|ENSMUSG00000018372.7|centrosomal protein 95
mm10_v2_chr4_-_119189949_119189964	0.0242331	Nkx2-9	ENSMUST00000124626.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein
mm10_v2_chr19_+_8819401_8819401	0.0219739	Nkx2-9	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr12_-_56536895_56536937	0.0214768	Nkx2-9	ENSMUST00000001536.8|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr4_-_141664063_141664170	0.0199042	Nkx2-9	ENSMUST00000084203.4|Plekhm2|ENSMUSG00000028917.8|pleckstrin homology domain containing, family M (with RUN domain) member 2
mm10_v2_chr18_-_65393844_65393922	0.0195684	Nkx2-9	ENSMUST00000035548.8|Alpk2|ENSMUSG00000032845.9|alpha-kinase 2
mm10_v2_chr1_-_135688094_135688149	0.0185032	Nkx2-9	ENSMUST00000112103.1|Nav1|ENSMUSG00000090399.1|neuron navigator 1
mm10_v2_chr17_+_34644764_34644797	0.015176	Nkx2-9	ENSMUST00000036720.8|Fkbpl|ENSMUSG00000033739.8|FK506 binding protein-like
mm10_v2_chr1_+_87264345_87264370	0.0142452	Nkx2-9	ENSMUST00000118687.1|Efhd1|ENSMUSG00000026255.9|EF hand domain containing 1 	ENSMUST00000027472.6|Efhd1|ENSMUSG00000026255.9|EF hand domain containing 1
mm10_v2_chr8_+_123212857_123212911	0.0133788	Nkx2-9	ENSMUST00000060133.6|Spata33|ENSMUSG00000048478.6|spermatogenesis associated 33
mm10_v2_chr18_-_60848911_60848976	0.0130754	Nkx2-9	ENSMUST00000177172.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000175934.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000176630.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog
mm10_v2_chr16_-_36990449_36990467	0.0115879	Nkx2-9	ENSMUST00000075869.6|Fbxo40|ENSMUSG00000047746.8|F-box protein 40
mm10_v2_chrX_-_6320717_6320726	0.0106158	Nkx2-9	ENSMUST00000024049.7|Bmp15|ENSMUSG00000023279.7|bone morphogenetic protein 15
mm10_v2_chr7_+_35186370_35186408	0.0101938	Nkx2-9	ENSMUST00000135452.1|Slc7a10|ENSMUSG00000030495.6|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10 	ENSMUST00000001854.5|Slc7a10|ENSMUSG00000030495.6|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
mm10_v2_chrX_-_7899220_7899271	0.00980524	Nkx2-9	ENSMUST00000033497.2|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr8_+_77549393_77549444	0.00953385	Nkx2-9	ENSMUST00000056237.8|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative) 	ENSMUST00000118622.1|Prmt10|ENSMUSG00000037134.10|protein arginine methyltransferase 10 (putative)
mm10_v2_chr10_-_120979327_120979373	0.00812676	Nkx2-9	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr1_+_171329015_171329145	0.00726506	Nkx2-9	ENSMUST00000111300.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr2_+_68104671_68104671	0.00642896	Nkx2-9	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr16_+_70313949_70314016	0.00633756	Nkx2-9	ENSMUST00000163832.1|Gbe1|ENSMUSG00000022707.10|glucan (1,4-alpha-), branching enzyme 1
mm10_v2_chr15_+_58933774_58933836	0.00262442	Nkx2-9	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr10_+_82378593_82378593	0.0023678	Nkx2-9	ENSMUST00000165906.1|Gm4924|ENSMUSG00000073427.3|predicted gene 4924
mm10_v2_chr6_-_125380793_125380793	0.00206992	Nkx2-9	ENSMUST00000042647.6|Plekhg6|ENSMUSG00000038167.6|pleckstrin homology domain containing, family G (with RhoGef domain) member 6
mm10_v2_chr16_-_33380717_33380755	0.0016388	Nkx2-9	ENSMUST00000180923.1|1700007L15Rik|ENSMUSG00000097318.1|RIKEN cDNA 1700007L15 gene
mm10_v2_chr5_+_91074611_91074629	0.000546613	Nkx2-9	ENSMUST00000031324.4|Ereg|ENSMUSG00000029377.4|epiregulin
