mm10_v2_chr5_+_149006948_149006966	0.369989	Pax4	ENSMUST00000124198.1|Gm15408|ENSMUSG00000086610.1|predicted gene 15408
mm10_v2_chr5_-_103100054_103100088	0.342456	Pax4	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr6_+_113483297_113483316	0.289345	Pax4	ENSMUST00000032422.5|Creld1|ENSMUSG00000030284.5|cysteine-rich with EGF-like domains 1
mm10_v2_chr17_+_17402672_17402771	0.284264	Pax4	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr1_-_156034800_156034817	0.281018	Pax4	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr2_-_65238573_65238609	0.266934	Pax4	ENSMUST00000090896.3|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000155082.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr2_-_65238625_65238643	0.255166	Pax4	ENSMUST00000112429.2|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000102726.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000112430.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr19_-_6015152_6015247	0.233916	Pax4	ENSMUST00000025891.8|Capn1|ENSMUSG00000024942.10|calpain 1
mm10_v2_chr8_-_22476809_22476879	0.231537	Pax4	ENSMUST00000163774.1|Smim19|ENSMUSG00000031534.8|small integral membrane protein 19 	ENSMUST00000033935.8|Smim19|ENSMUSG00000031534.8|small integral membrane protein 19
mm10_v2_chr4_+_136357423_136357541	0.226683	Pax4	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr10_+_119992916_119992958	0.225337	Pax4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr4_+_150087365_150087541	0.221388	Pax4	ENSMUST00000094451.3|Gpr157|ENSMUSG00000047875.6|G protein-coupled receptor 157
mm10_v2_chrX_-_73097017_73097095	0.217744	Pax4	ENSMUST00000114524.2|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A 	ENSMUST00000074619.5|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A
mm10_v2_chr11_+_117484368_117484368	0.213891	Pax4	ENSMUST00000092394.3|Gm11733|ENSMUSG00000069588.3|predicted gene 11733
mm10_v2_chr19_-_6015769_6015830	0.213272	Pax4	ENSMUST00000164843.1|Capn1|ENSMUSG00000024942.10|calpain 1
mm10_v2_chr10_+_26822560_26822602	0.199931	Pax4	ENSMUST00000135866.1|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr2_-_168741898_168741973	0.193272	Pax4	ENSMUST00000109176.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A 	ENSMUST00000178504.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr16_-_45844228_45844236	0.18706	Pax4	ENSMUST00000076333.5|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chrX_+_73192222_73192222	0.186574	Pax4	ENSMUST00000101486.4|Xlr3b|ENSMUSG00000073125.4|X-linked lymphocyte-regulated 3B
mm10_v2_chr7_+_58658181_58658294	0.185441	Pax4	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr13_+_23738804_23738809	0.18298	Pax4	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr9_-_101198999_101199080	0.177542	Pax4	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr1_+_88087802_88087848	0.169201	Pax4	ENSMUST00000113139.1|Ugt1a8|ENSMUSG00000089675.1|UDP glucuronosyltransferase 1 family, polypeptide A8
mm10_v2_chr5_+_135674572_135674592	0.168182	Pax4	ENSMUST00000153515.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr5_-_116591811_116591830	0.16775	Pax4	ENSMUST00000076124.5|Srrm4|ENSMUSG00000063919.6|serine/arginine repetitive matrix 4
mm10_v2_chr16_-_45844303_45844381	0.167074	Pax4	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chrX_+_143518576_143518599	0.1613	Pax4	ENSMUST00000033640.7|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr14_-_12823031_12823133	0.153324	Pax4	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr2_-_168741752_168741800	0.147253	Pax4	ENSMUST00000029060.4|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr3_-_59635733_59635733	0.146979	Pax4	ENSMUST00000177879.1|Gm5709|ENSMUSG00000095128.1|predicted gene 5709
mm10_v2_chr15_+_80977765_80977845	0.140271	Pax4	ENSMUST00000139517.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000042506.8|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000137255.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3
mm10_v2_chr15_-_79164477_79164496	0.139744	Pax4	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chrX_+_143518671_143518703	0.138072	Pax4	ENSMUST00000134402.1|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr7_-_45366714_45366840	0.133351	Pax4	ENSMUST00000107779.1|Ppfia3|ENSMUSG00000003863.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm10_v2_chr7_+_78913436_78913458	0.132996	Pax4	ENSMUST00000121645.1|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chr16_-_14291355_14291408	0.131593	Pax4	ENSMUST00000090287.3|Myh11|ENSMUSG00000018830.8|myosin, heavy polypeptide 11, smooth muscle
mm10_v2_chr2_-_160313616_160313616	0.122933	Pax4	ENSMUST00000109475.2|Gm826|ENSMUSG00000074623.4|predicted gene 826
mm10_v2_chr5_-_116288978_116288999	0.122439	Pax4	ENSMUST00000050178.6|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr7_+_78913401_78913428	0.122181	Pax4	ENSMUST00000118867.1|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chr13_+_75089826_75089886	0.119573	Pax4	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr18_-_22171392_22171423	0.116737	Pax4	ENSMUST00000025160.2|Ccdc178|ENSMUSG00000024306.6|coiled coil domain containing 178
mm10_v2_chr10_-_64090265_64090297	0.110466	Pax4	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr16_+_15637844_15637889	0.110452	Pax4	ENSMUST00000023352.8|Prkdc|ENSMUSG00000022672.8|protein kinase, DNA activated, catalytic polypeptide
mm10_v2_chr2_-_131328982_131328989	0.0999837	Pax4	ENSMUST00000110194.1|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr9_+_32696005_32696121	0.0991221	Pax4	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chrX_-_75875101_75875182	0.0961035	Pax4	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr3_+_20057802_20057857	0.0869689	Pax4	ENSMUST00000002502.5|Hltf|ENSMUSG00000002428.6|helicase-like transcription factor
mm10_v2_chrX_-_8206475_8206547	0.086661	Pax4	ENSMUST00000089403.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000077595.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000089402.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000082320.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila)
mm10_v2_chr9_+_92275746_92275767	0.084561	Pax4	ENSMUST00000126911.1|Plscr2|ENSMUSG00000032372.8|phospholipid scramblase 2
mm10_v2_chr11_+_78499087_78499123	0.0842397	Pax4	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr2_+_43555321_43555338	0.0826324	Pax4	ENSMUST00000028223.2|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase)
mm10_v2_chr12_+_33314277_33314328	0.0798635	Pax4	ENSMUST00000133549.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr11_+_43587040_43587072	0.0736821	Pax4	ENSMUST00000056256.2|4933415A04Rik|ENSMUSG00000045877.2|RIKEN cDNA 4933415A04 gene
mm10_v2_chr7_-_64925560_64925611	0.0711057	Pax4	ENSMUST00000149851.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1
mm10_v2_chr10_+_19935223_19935223	0.0699605	Pax4	ENSMUST00000129437.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr7_-_144738520_144738597	0.068748	Pax4	ENSMUST00000118556.2|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel 	ENSMUST00000033393.8|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr19_-_11081088_11081111	0.0662341	Pax4	ENSMUST00000025636.6|Ms4a8a|ENSMUSG00000024730.6|membrane-spanning 4-domains, subfamily A, member 8A
mm10_v2_chr17_+_69383024_69383065	0.0654941	Pax4	ENSMUST00000112674.1|Zbtb14|ENSMUSG00000049672.8|zinc finger and BTB domain containing 14
mm10_v2_chr7_+_78913765_78913791	0.0618032	Pax4	ENSMUST00000038142.8|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chrX_+_9199865_9199907	0.0606575	Pax4	ENSMUST00000069763.2|Lancl3|ENSMUSG00000047344.9|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm10_v2_chr15_-_89149557_89149650	0.0574532	Pax4	ENSMUST00000088823.3|Mapk11|ENSMUSG00000053137.6|mitogen-activated protein kinase 11
mm10_v2_chr4_+_150281573_150281646	0.056771	Pax4	ENSMUST00000105682.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr7_-_144738478_144738508	0.0563656	Pax4	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr7_+_7171330_7171373	0.052421	Pax4	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr10_+_127739516_127739592	0.047496	Pax4	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr6_-_130337502_130337574	0.0470911	Pax4	ENSMUST00000088017.4|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3 	ENSMUST00000111998.2|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3
mm10_v2_chr5_-_121502980_121502980	0.0461724	Pax4	ENSMUST00000079368.3|Adam1b|ENSMUSG00000062438.3|a disintegrin and metallopeptidase domain 1b
mm10_v2_chr7_+_81114799_81114808	0.0444064	Pax4	ENSMUST00000026820.4|Slc28a1|ENSMUSG00000025726.5|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
mm10_v2_chr1_-_74935549_74935613	0.0438276	Pax4	ENSMUST00000094844.3|Ccdc108|ENSMUSG00000047021.8|coiled-coil domain containing 108
mm10_v2_chr12_-_90738438_90738438	0.042657	Pax4	ENSMUST00000082432.3|Dio2|ENSMUSG00000007682.5|deiodinase, iodothyronine, type II
mm10_v2_chr15_-_59374149_59374199	0.0391396	Pax4	ENSMUST00000022976.4|E430025E21Rik|ENSMUSG00000022350.6|RIKEN cDNA E430025E21 gene
mm10_v2_chr10_+_127421124_127421203	0.0387923	Pax4	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr13_-_101768154_101768217	0.0359791	Pax4	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr12_-_98577940_98578046	0.0347023	Pax4	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr2_+_43555342_43555355	0.0332779	Pax4	ENSMUST00000112826.1|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase) 	ENSMUST00000050511.6|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase)
mm10_v2_chr6_+_136518820_136518851	0.0291809	Pax4	ENSMUST00000032335.6|Atf7ip|ENSMUSG00000030213.6|activating transcription factor 7 interacting protein
mm10_v2_chr17_-_23645264_23645309	0.027262	Pax4	ENSMUST00000024696.7|Mmp25|ENSMUSG00000023903.7|matrix metallopeptidase 25
mm10_v2_chr4_+_6365650_6365720	0.0247015	Pax4	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr18_+_76930017_76930101	0.0235663	Pax4	ENSMUST00000026487.4|Ier3ip1|ENSMUSG00000090000.1|immediate early response 3 interacting protein 1
mm10_v2_chr6_+_47877204_47877204	0.0220503	Pax4	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr2_-_105904484_105904564	0.0217948	Pax4	ENSMUST00000122965.1|Elp4|ENSMUSG00000027167.5|elongation protein 4 homolog (S. cerevisiae)
mm10_v2_chrX_+_142227923_142227951	0.0199126	Pax4	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr8_-_4217261_4217312	0.0187306	Pax4	ENSMUST00000168386.2|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr2_+_105904629_105904685	0.0177338	Pax4	ENSMUST00000037499.5|Immp1l|ENSMUSG00000042670.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm10_v2_chr4_-_58987095_58987119	0.0171305	Pax4	ENSMUST00000030069.6|Ptgr1|ENSMUSG00000028378.6|prostaglandin reductase 1
mm10_v2_chr19_+_53140430_53140449	0.0158308	Pax4	ENSMUST00000111741.2|Add3|ENSMUSG00000025026.8|adducin 3 (gamma)
mm10_v2_chrX_-_53209724_53209800	0.0154089	Pax4	ENSMUST00000174390.1|Plac1|ENSMUSG00000061082.5|placental specific protein 1
mm10_v2_chr19_+_3972322_3972345	0.0107675	Pax4	ENSMUST00000143380.1|Aldh3b2|ENSMUSG00000075296.4|aldehyde dehydrogenase 3 family, member B2
mm10_v2_chr9_-_103222063_103222149	0.00971658	Pax4	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr1_-_4360256_4360314	0.00894186	Pax4	ENSMUST00000027032.4|Rp1|ENSMUSG00000025900.5|retinitis pigmentosa 1 (human)
mm10_v2_chr4_+_155831272_155831351	0.00722567	Pax4	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr1_-_88008520_88008556	0.00541916	Pax4	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chr5_-_116288944_116288977	0.00471163	Pax4	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr2_+_105126505_105126529	0.00239079	Pax4	ENSMUST00000143043.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog
mm10_v2_chrX_-_9662950_9663003	0.00195927	Pax4	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr4_+_155831630_155831698	0.000359571	Pax4	ENSMUST00000105592.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000105591.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
