mm10_v2_chr19_+_41482632_41482688	0.192417	UGAAAUG	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr10_+_108162358_108162408	0.14687	UGAAAUG	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr12_-_118301429_118301458	0.135544	UGAAAUG	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr2_+_153031852_153032014	0.123106	UGAAAUG	ENSMUST00000037235.6|Xkr7|ENSMUSG00000042631.7|X Kell blood group precursor related family member 7 homolog
mm10_v2_chr15_-_71727815_71727848	0.100521	UGAAAUG	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr1_+_135766085_135766175	0.0929943	UGAAAUG	ENSMUST00000038945.5|Phlda3|ENSMUSG00000041801.5|pleckstrin homology-like domain, family A, member 3
mm10_v2_chr4_+_83525540_83525616	0.08301	UGAAAUG	ENSMUST00000053414.6|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171 	ENSMUST00000126429.1|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171
mm10_v2_chr1_+_15712303_15712303	0.071976	UGAAAUG	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr11_-_5381734_5381745	0.0717149	UGAAAUG	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr18_+_32938955_32939041	0.0676396	UGAAAUG	ENSMUST00000042868.4|Camk4|ENSMUSG00000038128.6|calcium/calmodulin-dependent protein kinase IV
mm10_v2_chr3_-_31310349_31310378	0.0652033	UGAAAUG	ENSMUST00000091259.2|Slc7a14|ENSMUSG00000069072.3|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm10_v2_chr13_+_93308006_93308034	0.0640387	UGAAAUG	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr15_-_36164872_36164884	0.0637416	UGAAAUG	ENSMUST00000058643.3|Fbxo43|ENSMUSG00000048230.5|F-box protein 43
mm10_v2_chrX_-_20291776_20291834	0.062866	UGAAAUG	ENSMUST00000072451.4|Slc9a7|ENSMUSG00000037341.7|solute carrier family 9 (sodium/hydrogen exchanger), member 7
mm10_v2_chr13_-_64274879_64274947	0.06215	UGAAAUG	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr9_+_72532214_72532271	0.0621455	UGAAAUG	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr4_-_34882919_34882964	0.0583797	UGAAAUG	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr1_-_157412576_157412621	0.0583099	UGAAAUG	ENSMUST00000078308.6|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2 	ENSMUST00000139470.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr1_+_136624901_136624949	0.0580886	UGAAAUG	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr9_-_44234014_44234046	0.0565804	UGAAAUG	ENSMUST00000037644.6|Cbl|ENSMUSG00000034342.8|Casitas B-lineage lymphoma
mm10_v2_chr6_-_97148908_97148930	0.0558246	UGAAAUG	ENSMUST00000142116.1|Eogt|ENSMUSG00000035245.6|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 	ENSMUST00000113387.1|Eogt|ENSMUSG00000035245.6|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
mm10_v2_chr10_-_18743691_18743760	0.0553608	UGAAAUG	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr12_-_102878406_102878449	0.0529019	UGAAAUG	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr19_-_31765027_31765079	0.0523685	UGAAAUG	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr2_+_121955964_121956001	0.0512897	UGAAAUG	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr18_-_47368830_47368878	0.0474861	UGAAAUG	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr11_-_40755201_40755311	0.0471077	UGAAAUG	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr18_+_34220978_34221020	0.0459408	UGAAAUG	ENSMUST00000079362.5|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli 	ENSMUST00000115781.3|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli
mm10_v2_chr2_-_120970706_120970761	0.0446179	UGAAAUG	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr8_-_26119125_26119233	0.0434429	UGAAAUG	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr5_+_88886809_88886825	0.0434226	UGAAAUG	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr15_+_80711292_80711340	0.0398158	UGAAAUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr12_+_52699297_52699411	0.0384246	UGAAAUG	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr12_+_83632208_83632325	0.0379156	UGAAAUG	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr19_+_31868754_31868787	0.0377831	UGAAAUG	ENSMUST00000075838.5|A1cf|ENSMUSG00000052595.6|APOBEC1 complementation factor
mm10_v2_chr14_+_25459206_25459225	0.0377211	UGAAAUG	ENSMUST00000162645.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr5_+_14514918_14514951	0.0368009	UGAAAUG	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr3_+_138526174_138526191	0.036279	UGAAAUG	ENSMUST00000029803.7|Eif4e|ENSMUSG00000028156.8|eukaryotic translation initiation factor 4E
mm10_v2_chr2_+_5951440_5951469	0.0351578	UGAAAUG	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr9_+_32116040_32116136	0.0344649	UGAAAUG	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr14_+_49066495_49066587	0.0339633	UGAAAUG	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr1_-_52233211_52233232	0.0333592	UGAAAUG	ENSMUST00000114513.2|Gls|ENSMUSG00000026103.8|glutaminase 	ENSMUST00000114510.1|Gls|ENSMUSG00000026103.8|glutaminase
mm10_v2_chr11_-_108343917_108343941	0.0332466	UGAAAUG	ENSMUST00000059595.4|Prkca|ENSMUSG00000050965.8|protein kinase C, alpha
mm10_v2_chr4_-_108301045_108301107	0.033154	UGAAAUG	ENSMUST00000043616.6|Zyg11b|ENSMUSG00000034636.9|zyg-ll family member B, cell cycle regulator
mm10_v2_chr18_+_14783238_14783259	0.0331273	UGAAAUG	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr5_+_76840597_76840637	0.0326979	UGAAAUG	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr8_-_34965631_34965714	0.0323882	UGAAAUG	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr19_-_29805989_29806009	0.0322624	UGAAAUG	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr18_+_23954668_23954704	0.0320372	UGAAAUG	ENSMUST00000060762.4|Zfp397|ENSMUSG00000024276.6|zinc finger protein 397
mm10_v2_chr2_-_103797617_103797662	0.03126	UGAAAUG	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr6_+_8948608_8948619	0.0311714	UGAAAUG	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr5_+_13399309_13399382	0.0308715	UGAAAUG	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr13_-_70637634_70637825	0.0306333	UGAAAUG	ENSMUST00000043493.5|BC018507|ENSMUSG00000034525.6|cDNA sequence BC018507
mm10_v2_chr3_-_18243289_18243349	0.0299793	UGAAAUG	ENSMUST00000035625.6|Cyp7b1|ENSMUSG00000039519.6|cytochrome P450, family 7, subfamily b, polypeptide 1
mm10_v2_chr12_+_3807017_3807063	0.0299517	UGAAAUG	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr8_+_90828820_90828842	0.0298748	UGAAAUG	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr16_+_42907563_42907684	0.0297464	UGAAAUG	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr1_-_105356658_105356714	0.0293442	UGAAAUG	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr6_+_136518820_136518851	0.0287472	UGAAAUG	ENSMUST00000032335.6|Atf7ip|ENSMUSG00000030213.6|activating transcription factor 7 interacting protein
mm10_v2_chr5_+_142401484_142401532	0.0286711	UGAAAUG	ENSMUST00000072837.5|Foxk1|ENSMUSG00000056493.8|forkhead box K1
mm10_v2_chr8_+_22859528_22859554	0.0285117	UGAAAUG	ENSMUST00000110696.1|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A 	ENSMUST00000044331.6|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A
mm10_v2_chr3_-_100685431_100685503	0.0284877	UGAAAUG	ENSMUST00000008907.7|Man1a2|ENSMUSG00000008763.10|mannosidase, alpha, class 1A, member 2
mm10_v2_chr11_+_77686155_77686179	0.0284494	UGAAAUG	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr12_-_87200200_87200284	0.0281076	UGAAAUG	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr4_-_87230435_87230477	0.0271047	UGAAAUG	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr17_+_26715644_26715724	0.0267962	UGAAAUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr6_-_38876163_38876234	0.0263845	UGAAAUG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr13_-_98891036_98891063	0.0263625	UGAAAUG	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr4_-_11322109_11322146	0.0253342	UGAAAUG	ENSMUST00000084892.5|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans) 	ENSMUST00000128024.1|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans)
mm10_v2_chrX_-_167382747_167382760	0.0250557	UGAAAUG	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr4_+_54947976_54948054	0.0250402	UGAAAUG	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr12_-_69357120_69357181	0.0248384	UGAAAUG	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr18_-_79109391_79109510	0.0248141	UGAAAUG	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr8_-_91313223_91313279	0.0244575	UGAAAUG	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr12_-_98577940_98578046	0.0244558	UGAAAUG	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr3_-_32365643_32365691	0.024327	UGAAAUG	ENSMUST00000029199.5|Zmat3|ENSMUSG00000027663.6|zinc finger matrin type 3
mm10_v2_chr13_+_16014457_16014475	0.0240584	UGAAAUG	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr2_-_73892530_73892555	0.0239874	UGAAAUG	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr16_-_16359016_16359040	0.0237886	UGAAAUG	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr8_-_79711631_79711740	0.0237049	UGAAAUG	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr14_+_27238018_27238046	0.0235243	UGAAAUG	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr14_+_70077375_70077445	0.0234529	UGAAAUG	ENSMUST00000035908.1|Egr3|ENSMUSG00000033730.3|early growth response 3
mm10_v2_chr1_+_152954966_152955101	0.0232977	UGAAAUG	ENSMUST00000043313.8|Nmnat2|ENSMUSG00000042751.8|nicotinamide nucleotide adenylyltransferase 2
mm10_v2_chr14_-_26971232_26971232	0.0229931	UGAAAUG	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chrX_-_111697069_111697127	0.0229684	UGAAAUG	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr2_+_72285637_72285749	0.0226271	UGAAAUG	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr14_+_111675113_111675119	0.0223571	UGAAAUG	ENSMUST00000042767.7|Slitrk5|ENSMUSG00000033214.9|SLIT and NTRK-like family, member 5
mm10_v2_chr11_-_87359011_87359081	0.0222576	UGAAAUG	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr13_+_81711407_81711457	0.0222085	UGAAAUG	ENSMUST00000057598.5|Mblac2|ENSMUSG00000051098.5|metallo-beta-lactamase domain containing 2
mm10_v2_chr9_-_72111827_72111895	0.0221314	UGAAAUG	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr5_+_30155243_30155311	0.0219721	UGAAAUG	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr5_+_121397936_121398004	0.0217505	UGAAAUG	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr13_+_104287855_104287882	0.0215694	UGAAAUG	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chr7_-_73541738_73541758	0.0213965	UGAAAUG	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr13_+_75089826_75089886	0.0213891	UGAAAUG	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr5_-_123879992_123880020	0.0212425	UGAAAUG	ENSMUST00000164267.1|Gpr81|ENSMUSG00000049241.5|G protein-coupled receptor 81
mm10_v2_chr4_-_121098190_121098250	0.0211979	UGAAAUG	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr4_-_126968124_126968154	0.0210587	UGAAAUG	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr18_-_54990124_54990180	0.0210535	UGAAAUG	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr3_+_129532386_129532440	0.0205699	UGAAAUG	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr10_+_50895651_50895651	0.0205566	UGAAAUG	ENSMUST00000020071.3|Sim1|ENSMUSG00000019913.3|single-minded homolog 1 (Drosophila)
mm10_v2_chr5_-_147076482_147076586	0.0202917	UGAAAUG	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chr3_-_80913528_80913666	0.0202485	UGAAAUG	ENSMUST00000107743.1|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit 	ENSMUST00000029654.8|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit
mm10_v2_chr10_+_128377086_128377155	0.0199764	UGAAAUG	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr6_+_126939957_126939988	0.0198509	UGAAAUG	ENSMUST00000032497.3|D6Wsu163e|ENSMUSG00000030347.3|DNA segment, Chr 6, Wayne State University 163, expressed
mm10_v2_chr7_+_59228743_59228769	0.0198167	UGAAAUG	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr13_-_46727932_46728005	0.0195498	UGAAAUG	ENSMUST00000021803.9|Nup153|ENSMUSG00000021374.9|nucleoporin 153
mm10_v2_chr10_+_111164794_111164811	0.0194294	UGAAAUG	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr11_+_121259983_121260055	0.0193306	UGAAAUG	ENSMUST00000106113.1|Foxk2|ENSMUSG00000039275.9|forkhead box K2
mm10_v2_chr14_-_27508460_27508503	0.0190833	UGAAAUG	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr19_-_4989964_4989972	0.0189199	UGAAAUG	ENSMUST00000056129.7|Npas4|ENSMUSG00000045903.8|neuronal PAS domain protein 4
mm10_v2_chr13_-_105054895_105054930	0.0187933	UGAAAUG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr4_-_70410422_70410463	0.0186774	UGAAAUG	ENSMUST00000144099.1|Cdk5rap2|ENSMUSG00000039298.10|CDK5 regulatory subunit associated protein 2
mm10_v2_chr9_-_114640175_114640218	0.018289	UGAAAUG	ENSMUST00000070117.6|Cnot10|ENSMUSG00000056167.6|CCR4-NOT transcription complex, subunit 10
mm10_v2_chr3_+_14533817_14533866	0.0181938	UGAAAUG	ENSMUST00000169079.1|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1 	ENSMUST00000091325.3|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr3_+_89520152_89520175	0.0181526	UGAAAUG	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr11_+_31872100_31872226	0.0178787	UGAAAUG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr5_-_76304474_76304548	0.0178717	UGAAAUG	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr14_-_78725089_78725089	0.0177431	UGAAAUG	ENSMUST00000074729.5|Dgkh|ENSMUSG00000034731.9|diacylglycerol kinase, eta
mm10_v2_chr3_+_95929246_95929298	0.0177185	UGAAAUG	ENSMUST00000165307.1|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENSMUST00000015893.6|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm10_v2_chr10_+_59403644_59403669	0.0174856	UGAAAUG	ENSMUST00000009790.7|Pla2g12b|ENSMUSG00000009646.7|phospholipase A2, group XIIB
mm10_v2_chr1_-_58586191_58586323	0.0174749	UGAAAUG	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr14_-_24245913_24245925	0.0171045	UGAAAUG	ENSMUST00000073687.6|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila) 	ENSMUST00000090398.4|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila)
mm10_v2_chr12_+_103532435_103532565	0.0170221	UGAAAUG	ENSMUST00000021631.5|Ppp4r4|ENSMUSG00000021209.6|protein phosphatase 4, regulatory subunit 4
mm10_v2_chr14_-_57890242_57890320	0.0169175	UGAAAUG	ENSMUST00000089473.3|Zdhhc20|ENSMUSG00000021969.7|zinc finger, DHHC domain containing 20
mm10_v2_chrX_-_52165252_52165280	0.0167359	UGAAAUG	ENSMUST00000033450.2|Gpc4|ENSMUSG00000031119.4|glypican 4
mm10_v2_chr11_+_53350783_53350833	0.0166638	UGAAAUG	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr3_-_115715031_115715062	0.016418	UGAAAUG	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr12_-_98901478_98901492	0.0162873	UGAAAUG	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr1_+_40805578_40805692	0.0162733	UGAAAUG	ENSMUST00000114765.2|Tmem182|ENSMUSG00000079588.2|transmembrane protein 182
mm10_v2_chr4_+_59189240_59189257	0.0161042	UGAAAUG	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr15_-_84987958_84988018	0.0158785	UGAAAUG	ENSMUST00000165743.1|5031439G07Rik|ENSMUSG00000036046.8|RIKEN cDNA 5031439G07 gene 	ENSMUST00000047144.6|5031439G07Rik|ENSMUSG00000036046.8|RIKEN cDNA 5031439G07 gene
mm10_v2_chr5_-_5749317_5749340	0.0156884	UGAAAUG	ENSMUST00000015796.2|Steap1|ENSMUSG00000015652.3|six transmembrane epithelial antigen of the prostate 1
mm10_v2_chr14_+_21499770_21499883	0.0155844	UGAAAUG	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr4_+_130663321_130663412	0.0155487	UGAAAUG	ENSMUST00000030315.6|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105992.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105991.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000143277.1|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097864.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097862.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila)
mm10_v2_chr15_-_93275151_93275178	0.0153791	UGAAAUG	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr11_-_86757483_86757572	0.0153051	UGAAAUG	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr10_-_62880014_62880014	0.0152518	UGAAAUG	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr8_-_23208407_23208453	0.0151115	UGAAAUG	ENSMUST00000167004.1|Agpat6|ENSMUSG00000031545.5|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)
mm10_v2_chr18_-_82692734_82692933	0.015062	UGAAAUG	ENSMUST00000182122.1|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236 	ENSMUST00000171071.2|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236
mm10_v2_chr9_+_15306212_15306219	0.0150578	UGAAAUG	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr7_+_110018301_110018425	0.0147076	UGAAAUG	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr1_-_82586781_82586849	0.0145042	UGAAAUG	ENSMUST00000087050.5|Col4a4|ENSMUSG00000067158.8|collagen, type IV, alpha 4
mm10_v2_chr15_+_96287518_96287604	0.0143622	UGAAAUG	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr9_-_43116514_43116572	0.0143367	UGAAAUG	ENSMUST00000061833.4|Tmem136|ENSMUSG00000048503.6|transmembrane protein 136
mm10_v2_chr4_-_149099802_149099876	0.0142165	UGAAAUG	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr3_+_30995747_30995868	0.0141677	UGAAAUG	ENSMUST00000108249.2|Prkci|ENSMUSG00000037643.8|protein kinase C, iota
mm10_v2_chr11_-_53423123_53423170	0.0139683	UGAAAUG	ENSMUST00000036045.5|Leap2|ENSMUSG00000036216.5|liver-expressed antimicrobial peptide 2
mm10_v2_chr3_-_73056943_73056943	0.0139422	UGAAAUG	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr11_-_47379405_47379522	0.0135093	UGAAAUG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr1_+_160978576_160978606	0.0134818	UGAAAUG	ENSMUST00000064725.5|Serpinc1|ENSMUSG00000026715.7|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm10_v2_chr2_+_49451486_49451559	0.0133625	UGAAAUG	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr17_-_46831413_46831413	0.0133282	UGAAAUG	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chrX_-_36902877_36902904	0.0132853	UGAAAUG	ENSMUST00000057093.6|Nkrf|ENSMUSG00000044149.6|NF-kappaB repressing factor
mm10_v2_chr1_+_150393250_150393265	0.0131834	UGAAAUG	ENSMUST00000119161.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr7_+_57590503_57590523	0.0131191	UGAAAUG	ENSMUST00000085240.4|Gabrb3|ENSMUSG00000033676.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm10_v2_chr19_+_11747548_11747581	0.0130536	UGAAAUG	ENSMUST00000025585.3|Gif|ENSMUSG00000024682.3|gastric intrinsic factor
mm10_v2_chr3_-_56183678_56183701	0.0128391	UGAAAUG	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr18_+_3383223_3383263	0.0128265	UGAAAUG	ENSMUST00000162301.1|Cul2|ENSMUSG00000024231.8|cullin 2 	ENSMUST00000161317.1|Cul2|ENSMUSG00000024231.8|cullin 2
mm10_v2_chr10_-_84440591_84440604	0.01276	UGAAAUG	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr18_+_44380479_44380554	0.0126303	UGAAAUG	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr13_+_104178797_104178872	0.0126237	UGAAAUG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chrX_-_12762069_12762080	0.0125496	UGAAAUG	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr5_+_122850186_122850198	0.0123892	UGAAAUG	ENSMUST00000031434.6|Rnf34|ENSMUSG00000029474.6|ring finger protein 34
mm10_v2_chr5_-_112577186_112577204	0.0123708	UGAAAUG	ENSMUST00000079491.7|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like 	ENSMUST00000075387.6|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like
mm10_v2_chr15_-_50889691_50889714	0.0123126	UGAAAUG	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr10_-_5922385_5922407	0.0122477	UGAAAUG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr2_+_62664279_62664300	0.0122338	UGAAAUG	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr16_+_33380765_33380787	0.0119687	UGAAAUG	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr16_-_50432340_50432409	0.0118123	UGAAAUG	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr17_-_12769605_12769700	0.0117427	UGAAAUG	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr9_-_45984816_45984871	0.0116319	UGAAAUG	ENSMUST00000172450.1|Pafah1b2|ENSMUSG00000003131.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm10_v2_chr10_+_63243785_63243846	0.0115785	UGAAAUG	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr1_-_170867761_170867784	0.0115455	UGAAAUG	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr15_-_94589870_94589889	0.0114515	UGAAAUG	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr2_-_167188787_167188815	0.0114296	UGAAAUG	ENSMUST00000059826.8|Kcnb1|ENSMUSG00000050556.8|potassium voltage gated channel, Shab-related subfamily, member 1
mm10_v2_chr11_+_75679259_75679327	0.0113641	UGAAAUG	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr15_+_82274935_82275034	0.0112838	UGAAAUG	ENSMUST00000023095.6|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr1_-_9967932_9967932	0.0112649	UGAAAUG	ENSMUST00000185184.1|Tcf24|ENSMUSG00000099032.1|transcription factor 24
mm10_v2_chr1_+_86064619_86064648	0.0112378	UGAAAUG	ENSMUST00000027432.8|Psmd1|ENSMUSG00000026229.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm10_v2_chr6_-_129451906_129452000	0.0110655	UGAAAUG	ENSMUST00000037481.7|Clec1a|ENSMUSG00000033082.8|C-type lectin domain family 1, member a
mm10_v2_chr14_+_120275669_120275714	0.0110113	UGAAAUG	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr4_-_81442756_81442836	0.0107884	UGAAAUG	ENSMUST00000107262.1|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein 	ENSMUST00000102830.3|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein
mm10_v2_chr4_-_141538434_141538525	0.0107399	UGAAAUG	ENSMUST00000078886.3|Spen|ENSMUSG00000040761.10|SPEN homolog, transcriptional regulator (Drosophila)
mm10_v2_chr1_+_151344472_151344530	0.0107266	UGAAAUG	ENSMUST00000023918.6|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein 	ENSMUST00000097543.1|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein 	ENSMUST00000111887.3|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein
mm10_v2_chr1_+_89454769_89454885	0.0106259	UGAAAUG	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr13_-_17805093_17805189	0.0105501	UGAAAUG	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr11_-_107131922_107131954	0.0105414	UGAAAUG	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr9_-_59750616_59750649	0.0103748	UGAAAUG	ENSMUST00000163586.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000177963.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000051039.4|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8
mm10_v2_chr18_+_69345721_69345811	0.0103724	UGAAAUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr19_+_47014672_47014698	0.0103389	UGAAAUG	ENSMUST00000037636.3|Ina|ENSMUSG00000034336.3|internexin neuronal intermediate filament protein, alpha
mm10_v2_chr6_+_8259379_8259460	0.010208	UGAAAUG	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr1_+_132417409_132417464	0.0101551	UGAAAUG	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr12_+_73901370_73901391	0.00989449	UGAAAUG	ENSMUST00000110461.1|Hif1a|ENSMUSG00000021109.7|hypoxia inducible factor 1, alpha subunit
mm10_v2_chr2_+_107290590_107290660	0.00984286	UGAAAUG	ENSMUST00000037012.2|Kcna4|ENSMUSG00000042604.5|potassium voltage-gated channel, shaker-related subfamily, member 4
mm10_v2_chr5_-_28210022_28210034	0.00984163	UGAAAUG	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr1_-_60566708_60566769	0.0097076	UGAAAUG	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chr11_-_88718223_88718294	0.00967801	UGAAAUG	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr11_+_93996082_93996103	0.00955989	UGAAAUG	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr3_-_116007399_116007411	0.00950592	UGAAAUG	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chr1_-_190170671_190170744	0.00950447	UGAAAUG	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr6_+_136954521_136954529	0.00947276	UGAAAUG	ENSMUST00000137768.1|Pde6h|ENSMUSG00000064330.7|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm10_v2_chr16_-_64786321_64786321	0.00945812	UGAAAUG	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr3_-_144570136_144570227	0.00938405	UGAAAUG	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr3_+_40745430_40745459	0.00937066	UGAAAUG	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr7_-_144939823_144939869	0.00918943	UGAAAUG	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr13_-_8871696_8871749	0.0091345	UGAAAUG	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr2_-_84650714_84650749	0.00913434	UGAAAUG	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr7_+_56050135_56050217	0.00911329	UGAAAUG	ENSMUST00000076226.6|Herc2|ENSMUSG00000030451.9|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm10_v2_chr18_+_42275353_42275392	0.00905835	UGAAAUG	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr6_+_56714891_56714951	0.00903587	UGAAAUG	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr18_-_35215008_35215033	0.00878213	UGAAAUG	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr6_+_72598475_72598628	0.00877277	UGAAAUG	ENSMUST00000070597.6|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase) 	ENSMUST00000176364.1|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase) 	ENSMUST00000176168.1|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase)
mm10_v2_chr2_+_31572701_31572725	0.0085747	UGAAAUG	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr1_-_120074023_120074074	0.00857076	UGAAAUG	ENSMUST00000056089.7|Tmem37|ENSMUSG00000050777.7|transmembrane protein 37
mm10_v2_chr13_+_109903089_109903110	0.00852353	UGAAAUG	ENSMUST00000120664.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr10_+_88379217_88379299	0.00848393	UGAAAUG	ENSMUST00000130301.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 	ENSMUST00000020251.8|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr15_-_96699698_96699717	0.00830505	UGAAAUG	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr2_+_133552159_133552237	0.00829111	UGAAAUG	ENSMUST00000028836.6|Bmp2|ENSMUSG00000027358.6|bone morphogenetic protein 2
mm10_v2_chr16_+_44139821_44139900	0.00816979	UGAAAUG	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr3_-_95217690_95217728	0.0081606	UGAAAUG	ENSMUST00000107209.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr1_+_166379097_166379097	0.0080492	UGAAAUG	ENSMUST00000027846.7|Tada1|ENSMUSG00000026563.7|transcriptional adaptor 1
mm10_v2_chr9_+_44604844_44604921	0.00803394	UGAAAUG	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr2_-_104816696_104816792	0.00796375	UGAAAUG	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr7_+_83584910_83585092	0.00788363	UGAAAUG	ENSMUST00000039317.7|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3 	ENSMUST00000164944.1|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3
mm10_v2_chr13_+_14630237_14630296	0.00768774	UGAAAUG	ENSMUST00000178289.1|AW209491|ENSMUSG00000039182.5|expressed sequence AW209491 	ENSMUST00000038690.4|AW209491|ENSMUSG00000039182.5|expressed sequence AW209491
mm10_v2_chr3_+_16183177_16183206	0.00765783	UGAAAUG	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr5_-_102069905_102069940	0.00763188	UGAAAUG	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr1_-_195092242_195092253	0.00724604	UGAAAUG	ENSMUST00000162650.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000160817.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000162614.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000016637.6|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein
mm10_v2_chr10_+_98915117_98915172	0.00719773	UGAAAUG	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr15_-_38078842_38078860	0.00719427	UGAAAUG	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr1_-_30949756_30949770	0.00715987	UGAAAUG	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr8_-_94037007_94037027	0.00709989	UGAAAUG	ENSMUST00000034204.9|Nudt21|ENSMUSG00000031754.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm10_v2_chr2_-_148443543_148443582	0.00706985	UGAAAUG	ENSMUST00000099269.3|Cd93|ENSMUSG00000027435.8|CD93 antigen
mm10_v2_chr9_-_95511897_95511996	0.00705745	UGAAAUG	ENSMUST00000079659.5|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing 	ENSMUST00000078374.6|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing
mm10_v2_chr1_+_174501796_174501843	0.00682714	UGAAAUG	ENSMUST00000030039.7|Fmn2|ENSMUSG00000028354.8|formin 2
mm10_v2_chr4_-_101265236_101265282	0.00681837	UGAAAUG	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr5_+_32458974_32459110	0.00655844	UGAAAUG	ENSMUST00000015100.8|Ppp1cb|ENSMUSG00000014956.9|protein phosphatase 1, catalytic subunit, beta isoform
mm10_v2_chr19_-_47692042_47692094	0.0065108	UGAAAUG	ENSMUST00000026045.7|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1 	ENSMUST00000086923.5|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1
mm10_v2_chrX_-_17572241_17572325	0.00650184	UGAAAUG	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr1_-_180813591_180813632	0.00648895	UGAAAUG	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr10_+_39369750_39369804	0.00643622	UGAAAUG	ENSMUST00000063091.6|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000099967.3|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000126486.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr13_-_117025505_117025541	0.00632953	UGAAAUG	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr12_-_79089623_79089670	0.00623487	UGAAAUG	ENSMUST00000072154.7|Pigh|ENSMUSG00000021120.10|phosphatidylinositol glycan anchor biosynthesis, class H
mm10_v2_chr2_-_94438081_94438161	0.00622448	UGAAAUG	ENSMUST00000028617.6|Api5|ENSMUSG00000027193.6|apoptosis inhibitor 5
mm10_v2_chr9_-_114564315_114564369	0.00601705	UGAAAUG	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr13_-_104228833_104228849	0.00601548	UGAAAUG	ENSMUST00000022226.4|Ppwd1|ENSMUSG00000021713.8|peptidylprolyl isomerase domain and WD repeat containing 1
mm10_v2_chr3_+_58576636_58576717	0.00595217	UGAAAUG	ENSMUST00000107924.1|Selt|ENSMUSG00000075700.9|selenoprotein T
mm10_v2_chr13_-_41220395_41220412	0.00594224	UGAAAUG	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr9_+_45838572_45838592	0.00591274	UGAAAUG	ENSMUST00000078111.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1 	ENSMUST00000034591.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1
mm10_v2_chr1_+_180726019_180726106	0.00573255	UGAAAUG	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr4_-_11076160_11076211	0.00572983	UGAAAUG	ENSMUST00000058183.8|Ndufaf6|ENSMUSG00000050323.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
mm10_v2_chr16_+_96145391_96145448	0.00565175	UGAAAUG	ENSMUST00000023913.8|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein 	ENSMUST00000135448.1|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein
mm10_v2_chr10_-_39895821_39895821	0.00558745	UGAAAUG	ENSMUST00000178045.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr4_-_111902754_111902918	0.00554839	UGAAAUG	ENSMUST00000102719.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9 	ENSMUST00000102721.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm10_v2_chr18_+_11052487_11052510	0.00547905	UGAAAUG	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr12_+_78748947_78748971	0.00545354	UGAAAUG	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr11_+_49846732_49846758	0.00529526	UGAAAUG	ENSMUST00000178543.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000164643.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000109179.2|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000020634.7|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9
mm10_v2_chr4_-_94603239_94603253	0.00523836	UGAAAUG	ENSMUST00000107107.2|Plaa|ENSMUSG00000028577.7|phospholipase A2, activating protein
mm10_v2_chr10_-_121586730_121586803	0.00521977	UGAAAUG	ENSMUST00000020316.2|Tbk1|ENSMUSG00000020115.2|TANK-binding kinase 1
mm10_v2_chr7_+_63444741_63444762	0.0051994	UGAAAUG	ENSMUST00000058476.7|Otud7a|ENSMUSG00000033510.8|OTU domain containing 7A
mm10_v2_chr2_-_181459364_181459439	0.00516146	UGAAAUG	ENSMUST00000155535.1|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000029106.6|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000087409.3|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46
mm10_v2_chr6_-_92706145_92706234	0.00513981	UGAAAUG	ENSMUST00000032093.5|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr12_+_76533540_76533597	0.00506423	UGAAAUG	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm10_v2_chr3_+_159839729_159839745	0.00502963	UGAAAUG	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr2_-_37647199_37647285	0.00498973	UGAAAUG	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr5_+_130171798_130171879	0.00481345	UGAAAUG	ENSMUST00000119797.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000148264.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr10_-_127288851_127288918	0.00468555	UGAAAUG	ENSMUST00000156208.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6 	ENSMUST00000026476.6|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr2_+_29619692_29619825	0.0045696	UGAAAUG	ENSMUST00000095087.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000091146.5|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000102872.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr9_-_99358518_99358552	0.0045195	UGAAAUG	ENSMUST00000042158.6|Esyt3|ENSMUSG00000037681.7|extended synaptotagmin-like protein 3
mm10_v2_chr1_+_167001417_167001431	0.00451215	UGAAAUG	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chrX_-_136743675_136743692	0.0045106	UGAAAUG	ENSMUST00000166478.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113097.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr11_-_20112876_20112925	0.00426403	UGAAAUG	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chr15_-_101438788_101438804	0.00419879	UGAAAUG	ENSMUST00000081945.3|Krt83|ENSMUSG00000047641.7|keratin 83
mm10_v2_chr12_+_116485714_116485784	0.00415226	UGAAAUG	ENSMUST00000070733.7|Ptprn2|ENSMUSG00000056553.8|protein tyrosine phosphatase, receptor type, N polypeptide 2
mm10_v2_chr4_+_124802543_124802678	0.00404368	UGAAAUG	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr8_-_121652895_121652913	0.00402644	UGAAAUG	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr2_-_151039363_151039403	0.00396069	UGAAAUG	ENSMUST00000128627.1|Ninl|ENSMUSG00000068115.7|ninein-like 	ENSMUST00000066640.4|Nanp|ENSMUSG00000053916.4|N-acetylneuraminic acid phosphatase
mm10_v2_chr11_+_42419729_42419785	0.00393404	UGAAAUG	ENSMUST00000007797.4|Gabrb2|ENSMUSG00000007653.6|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm10_v2_chr2_-_48949206_48949276	0.00386898	UGAAAUG	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr19_+_8819401_8819401	0.00386361	UGAAAUG	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr12_+_78226627_78226655	0.00377364	UGAAAUG	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr10_-_123196916_123196961	0.00376427	UGAAAUG	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr18_+_12128850_12128868	0.00373148	UGAAAUG	ENSMUST00000025270.6|Riok3|ENSMUSG00000024404.6|RIO kinase 3
mm10_v2_chr10_-_23349887_23349919	0.00371244	UGAAAUG	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chr8_-_60983215_60983319	0.00370308	UGAAAUG	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr4_+_116557658_116557724	0.00355797	UGAAAUG	ENSMUST00000030460.8|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr2_+_31759932_31759989	0.00352134	UGAAAUG	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr7_-_35318408_35318440	0.00349718	UGAAAUG	ENSMUST00000079693.5|Gpatch1|ENSMUSG00000063808.8|G patch domain containing 1
mm10_v2_chr9_-_90114812_90114821	0.00349072	UGAAAUG	ENSMUST00000085248.5|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1 	ENSMUST00000169860.1|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1
mm10_v2_chr2_-_153241402_153241426	0.00340327	UGAAAUG	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr6_-_51469869_51469894	0.00337847	UGAAAUG	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr2_-_66410064_66410134	0.00333812	UGAAAUG	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr13_+_75707484_75707510	0.0033234	UGAAAUG	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr11_+_73267388_73267539	0.00319041	UGAAAUG	ENSMUST00000049676.2|Trpv3|ENSMUSG00000043029.2|transient receptor potential cation channel, subfamily V, member 3
mm10_v2_chr13_-_89742490_89742515	0.00316512	UGAAAUG	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr2_-_156992021_156992119	0.00294742	UGAAAUG	ENSMUST00000109558.1|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000069600.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000072298.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3
mm10_v2_chr16_+_24393350_24393428	0.00294674	UGAAAUG	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr5_-_25100624_25100657	0.00294529	UGAAAUG	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr19_-_12796108_12796146	0.0029172	UGAAAUG	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr8_-_9771018_9771018	0.00289123	UGAAAUG	ENSMUST00000110969.3|Fam155a|ENSMUSG00000079157.3|family with sequence similarity 155, member A
mm10_v2_chr6_-_146577825_146577839	0.00286975	UGAAAUG	ENSMUST00000032427.8|Asun|ENSMUSG00000040250.8|asunder, spermatogenesis regulator
mm10_v2_chr3_-_95015214_95015246	0.00277666	UGAAAUG	ENSMUST00000128438.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000149747.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000019482.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr19_+_46761578_46761618	0.00275659	UGAAAUG	ENSMUST00000077666.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2 	ENSMUST00000099373.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2
mm10_v2_chr14_-_57746044_57746144	0.00274042	UGAAAUG	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr5_-_45639501_45639525	0.00256995	UGAAAUG	ENSMUST00000016023.7|Fam184b|ENSMUSG00000015879.7|family with sequence similarity 184, member B
mm10_v2_chr13_-_107022027_107022138	0.00247564	UGAAAUG	ENSMUST00000117539.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000122233.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000022204.9|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000159772.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A
mm10_v2_chr18_+_57878620_57878678	0.00242404	UGAAAUG	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr2_-_160367057_160367073	0.00230703	UGAAAUG	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr11_-_97187872_97187926	0.00228577	UGAAAUG	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr17_+_4994904_4995074	0.00217018	UGAAAUG	ENSMUST00000092723.4|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like) 	ENSMUST00000115797.2|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like)
mm10_v2_chr8_-_11008458_11008458	0.00207525	UGAAAUG	ENSMUST00000040514.6|Irs2|ENSMUSG00000038894.6|insulin receptor substrate 2
mm10_v2_chr14_-_47568427_47568436	0.00203094	UGAAAUG	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr1_-_64956807_64956824	0.00199737	UGAAAUG	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr3_-_32737147_32737147	0.00185196	UGAAAUG	ENSMUST00000043966.7|Mrpl47|ENSMUSG00000037531.7|mitochondrial ribosomal protein L47
mm10_v2_chr19_+_18749983_18749983	0.00183732	UGAAAUG	ENSMUST00000040489.7|Trpm6|ENSMUSG00000024727.8|transient receptor potential cation channel, subfamily M, member 6
mm10_v2_chr17_-_46031813_46031863	0.00182741	UGAAAUG	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr17_+_8165501_8165540	0.00178139	UGAAAUG	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr1_-_21961581_21961581	0.00174909	UGAAAUG	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr7_+_98703091_98703137	0.00171068	UGAAAUG	ENSMUST00000033009.9|Prkrir|ENSMUSG00000030753.9|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm10_v2_chr9_-_76323559_76323611	0.00167854	UGAAAUG	ENSMUST00000063140.8|Hcrtr2|ENSMUSG00000032360.10|hypocretin (orexin) receptor 2
mm10_v2_chr2_+_104122738_104122774	0.0016325	UGAAAUG	ENSMUST00000040374.5|A930018P22Rik|ENSMUSG00000032671.5|RIKEN cDNA A930018P22 gene
mm10_v2_chr15_-_103239812_103239888	0.00162248	UGAAAUG	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr3_+_157534351_157534411	0.00143517	UGAAAUG	ENSMUST00000029831.9|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106057.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106063.2|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr9_+_78113275_78113346	0.00142237	UGAAAUG	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chr2_+_3118335_3118392	0.00141789	UGAAAUG	ENSMUST00000115099.2|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr7_-_35754394_35754454	0.00139599	UGAAAUG	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr2_-_151668533_151668533	0.00137227	UGAAAUG	ENSMUST00000180195.1|Rad21l|ENSMUSG00000074704.3|RAD21-like (S. pombe) 	ENSMUST00000096439.3|Rad21l|ENSMUSG00000074704.3|RAD21-like (S. pombe)
mm10_v2_chr1_+_9798123_9798216	0.00126796	UGAAAUG	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr18_-_7004717_7004779	0.00125196	UGAAAUG	ENSMUST00000079788.4|Mkx|ENSMUSG00000061013.4|mohawk homeobox
mm10_v2_chr1_+_143640664_143640751	0.00120443	UGAAAUG	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr3_+_32436151_32436151	0.00115963	UGAAAUG	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr17_-_12992188_12992226	0.00115825	UGAAAUG	ENSMUST00000159986.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr17_-_25274299_25274317	0.00115392	UGAAAUG	ENSMUST00000172587.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000049911.9|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000173713.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr13_-_111490111_111490139	0.00103459	UGAAAUG	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chrX_+_13280970_13281031	0.000997165	UGAAAUG	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr8_-_71486037_71486067	0.00074897	UGAAAUG	ENSMUST00000093450.4|Ano8|ENSMUSG00000034863.7|anoctamin 8
mm10_v2_chr12_-_16589743_16589826	0.000728048	UGAAAUG	ENSMUST00000111067.2|Lpin1|ENSMUSG00000020593.8|lipin 1 	ENSMUST00000067124.5|Lpin1|ENSMUSG00000020593.8|lipin 1
mm10_v2_chr7_-_78578308_78578408	0.000721016	UGAAAUG	ENSMUST00000039431.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr14_+_120478443_120478510	0.000709588	UGAAAUG	ENSMUST00000062117.6|Rap2a|ENSMUSG00000051615.7|RAS related protein 2a
mm10_v2_chr3_-_152982240_152982251	0.000677877	UGAAAUG	ENSMUST00000044278.5|St6galnac5|ENSMUSG00000039037.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm10_v2_chr3_-_131272077_131272101	0.0006507	UGAAAUG	ENSMUST00000029610.8|Hadh|ENSMUSG00000027984.8|hydroxyacyl-Coenzyme A dehydrogenase
mm10_v2_chr4_-_105109829_105109913	0.000650189	UGAAAUG	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr14_+_26579535_26579612	0.000628829	UGAAAUG	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr19_+_40831248_40831292	0.000576941	UGAAAUG	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr5_-_73338580_73338640	0.000556794	UGAAAUG	ENSMUST00000087195.5|Ociad2|ENSMUSG00000029153.8|OCIA domain containing 2
mm10_v2_chr15_-_11905609_11905674	0.000522362	UGAAAUG	ENSMUST00000066529.3|Npr3|ENSMUSG00000022206.6|natriuretic peptide receptor 3
mm10_v2_chr14_+_32833955_32833966	0.000471309	UGAAAUG	ENSMUST00000104926.2|Fam170b|ENSMUSG00000078127.2|family with sequence similarity 170, member B
mm10_v2_chr10_+_34483400_34483445	0.000376888	UGAAAUG	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr2_-_34913976_34914043	0.000354155	UGAAAUG	ENSMUST00000028232.3|Phf19|ENSMUSG00000026873.3|PHD finger protein 19
mm10_v2_chr18_+_65580230_65580400	0.000352556	UGAAAUG	ENSMUST00000049016.5|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183236.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr14_+_73237891_73238007	0.000325706	UGAAAUG	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr8_+_108714644_108714644	0.000316509	UGAAAUG	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chr18_+_64887690_64887762	0.000282369	UGAAAUG	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr11_+_74649462_74649520	0.000236287	UGAAAUG	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr9_-_70657121_70657188	0.00018265	UGAAAUG	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr18_+_38250240_38250287	0.000163223	UGAAAUG	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr8_-_83332416_83332494	8.94798e-05	UGAAAUG	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr4_-_41695442_41695445	6.13087e-05	UGAAAUG	ENSMUST00000102961.3|Cntfr|ENSMUSG00000028444.11|ciliary neurotrophic factor receptor 	ENSMUST00000064443.6|Cntfr|ENSMUSG00000028444.11|ciliary neurotrophic factor receptor
