mm10_v2_chr2_+_107290590_107290660	0.0411209	UGCAUUG	ENSMUST00000037012.2|Kcna4|ENSMUSG00000042604.5|potassium voltage-gated channel, shaker-related subfamily, member 4
mm10_v2_chr5_+_3343893_3343945	0.0367771	UGCAUUG	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr3_-_51560816_51560878	0.0297306	UGCAUUG	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr5_-_71658308_71658308	0.0286588	UGCAUUG	ENSMUST00000031121.5|Gabra4|ENSMUSG00000029211.7|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
mm10_v2_chr12_-_72070991_72071079	0.0267368	UGCAUUG	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr8_-_84800024_84800283	0.0246662	UGCAUUG	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr5_+_13399309_13399382	0.0223706	UGCAUUG	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr9_+_72532214_72532271	0.0200662	UGCAUUG	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr3_+_51415986_51416044	0.0195514	UGCAUUG	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr3_-_73056943_73056943	0.0187603	UGCAUUG	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr1_+_187997821_187997834	0.0181814	UGCAUUG	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr18_-_77565050_77565162	0.017984	UGCAUUG	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr4_+_17853451_17853474	0.0165873	UGCAUUG	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr14_+_46760526_46760557	0.0159702	UGCAUUG	ENSMUST00000067426.4|Cdkn3|ENSMUSG00000037628.9|cyclin-dependent kinase inhibitor 3
mm10_v2_chr7_+_79273201_79273270	0.014776	UGCAUUG	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr12_-_108003594_108003613	0.0140003	UGCAUUG	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr6_-_38876163_38876234	0.0138898	UGCAUUG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr3_-_26133734_26133734	0.013314	UGCAUUG	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr2_-_73214409_73214447	0.0130501	UGCAUUG	ENSMUST00000028517.6|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr8_+_14095849_14095915	0.012726	UGCAUUG	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr4_-_136956784_136956871	0.0125555	UGCAUUG	ENSMUST00000030420.8|Epha8|ENSMUSG00000028661.8|Eph receptor A8
mm10_v2_chr10_-_89686250_89686306	0.0124706	UGCAUUG	ENSMUST00000092227.5|Scyl2|ENSMUSG00000069539.5|SCY1-like 2 (S. cerevisiae) 	ENSMUST00000174252.1|Scyl2|ENSMUSG00000069539.5|SCY1-like 2 (S. cerevisiae)
mm10_v2_chr6_+_140424086_140424138	0.0123099	UGCAUUG	ENSMUST00000087622.3|Plekha5|ENSMUSG00000030231.8|pleckstrin homology domain containing, family A member 5
mm10_v2_chr16_-_28445227_28445395	0.0117375	UGCAUUG	ENSMUST00000100024.1|Fgf12|ENSMUSG00000022523.9|fibroblast growth factor 12
mm10_v2_chr2_+_75659253_75659318	0.0116893	UGCAUUG	ENSMUST00000111964.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111962.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111961.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000164947.2|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000090792.4|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3
mm10_v2_chr14_+_49066495_49066587	0.0109922	UGCAUUG	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr11_+_77686155_77686179	0.0105527	UGCAUUG	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr10_-_49788743_49788769	0.0103121	UGCAUUG	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr7_-_38107490_38107534	0.0102653	UGCAUUG	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr18_-_64660981_64661010	0.00989287	UGCAUUG	ENSMUST00000025482.8|Atp8b1|ENSMUSG00000039529.8|ATPase, class I, type 8B, member 1
mm10_v2_chr19_-_59345746_59345853	0.00949227	UGCAUUG	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr8_+_34807287_34807310	0.00943118	UGCAUUG	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr14_-_77874887_77874941	0.00915165	UGCAUUG	ENSMUST00000022590.3|Dnajc15|ENSMUSG00000022013.3|DnaJ (Hsp40) homolog, subfamily C, member 15
mm10_v2_chr8_+_105860634_105860661	0.00913325	UGCAUUG	ENSMUST00000008594.7|Nutf2|ENSMUSG00000008450.7|nuclear transport factor 2
mm10_v2_chr9_-_52168111_52168111	0.00907059	UGCAUUG	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr11_-_55607733_55607822	0.00870806	UGCAUUG	ENSMUST00000108853.1|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit 	ENSMUST00000075603.4|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit
mm10_v2_chr12_+_103532435_103532565	0.00838251	UGCAUUG	ENSMUST00000021631.5|Ppp4r4|ENSMUSG00000021209.6|protein phosphatase 4, regulatory subunit 4
mm10_v2_chr4_-_134018829_134018841	0.00833936	UGCAUUG	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr13_+_55635002_55635036	0.00822767	UGCAUUG	ENSMUST00000172272.1|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENSMUST00000099479.3|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm10_v2_chr4_-_49845549_49845549	0.00784129	UGCAUUG	ENSMUST00000093859.4|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A 	ENSMUST00000076674.3|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A
mm10_v2_chr3_-_107696462_107696574	0.00782743	UGCAUUG	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr4_-_34882919_34882964	0.00780594	UGCAUUG	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr14_+_66911170_66911228	0.00771932	UGCAUUG	ENSMUST00000089236.3|Pnma2|ENSMUSG00000046204.7|paraneoplastic antigen MA2 	ENSMUST00000122431.2|Pnma2|ENSMUSG00000046204.7|paraneoplastic antigen MA2
mm10_v2_chr1_+_136624901_136624949	0.00756005	UGCAUUG	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr8_-_34965631_34965714	0.0074868	UGCAUUG	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr12_+_3426857_3426931	0.00745048	UGCAUUG	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr10_-_68278713_68278735	0.00721805	UGCAUUG	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr11_-_86544754_86544805	0.00714418	UGCAUUG	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr6_+_71707561_71707561	0.00702615	UGCAUUG	ENSMUST00000121469.1|Reep1|ENSMUSG00000052852.7|receptor accessory protein 1
mm10_v2_chr5_-_121836852_121836880	0.00685466	UGCAUUG	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr15_+_40655020_40655054	0.00674795	UGCAUUG	ENSMUST00000053467.4|Zfpm2|ENSMUSG00000022306.8|zinc finger protein, multitype 2
mm10_v2_chr1_+_118627943_118627951	0.00663953	UGCAUUG	ENSMUST00000027629.8|Tfcp2l1|ENSMUSG00000026380.9|transcription factor CP2-like 1
mm10_v2_chr18_-_10181792_10181792	0.00629197	UGCAUUG	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr5_-_128953303_128953362	0.00624196	UGCAUUG	ENSMUST00000111346.1|Rimbp2|ENSMUSG00000029420.8|RIMS binding protein 2
mm10_v2_chr2_+_93642307_93642388	0.00618913	UGCAUUG	ENSMUST00000042078.3|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4 	ENSMUST00000111254.1|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4
mm10_v2_chr16_-_76373827_76373852	0.00613042	UGCAUUG	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr14_-_98169542_98169595	0.00610444	UGCAUUG	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr6_+_4903298_4903346	0.00597259	UGCAUUG	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr3_+_127633134_127633140	0.00594234	UGCAUUG	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr9_+_68653761_68653786	0.00591226	UGCAUUG	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr12_+_102948843_102948874	0.0058583	UGCAUUG	ENSMUST00000101099.5|Unc79|ENSMUSG00000021198.10|unc-79 homolog (C. elegans)
mm10_v2_chr13_-_89742490_89742515	0.00580995	UGCAUUG	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr15_-_38078842_38078860	0.00577496	UGCAUUG	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr9_+_62858085_62858138	0.00553185	UGCAUUG	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr8_-_80739497_80739497	0.00548801	UGCAUUG	ENSMUST00000043359.8|Smarca5|ENSMUSG00000031715.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm10_v2_chr9_-_42472198_42472265	0.0053782	UGCAUUG	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chrX_-_108834303_108834381	0.00536314	UGCAUUG	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr18_+_64340225_64340364	0.00523289	UGCAUUG	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr9_-_78481724_78481751	0.00516946	UGCAUUG	ENSMUST00000042235.8|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr19_-_6057736_6057769	0.00489592	UGCAUUG	ENSMUST00000007482.6|Mrpl49|ENSMUSG00000007338.9|mitochondrial ribosomal protein L49
mm10_v2_chr7_+_73375494_73375549	0.00489548	UGCAUUG	ENSMUST00000094312.5|Rgma|ENSMUSG00000070509.9|RGM domain family, member A 	ENSMUST00000119206.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr15_+_39198244_39198363	0.00486757	UGCAUUG	ENSMUST00000082054.5|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2 	ENSMUST00000042917.9|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2
mm10_v2_chr19_+_29522263_29522341	0.00480265	UGCAUUG	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr2_-_33431324_33431324	0.00445583	UGCAUUG	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr7_+_110122299_110122350	0.00436279	UGCAUUG	ENSMUST00000033326.8|Wee1|ENSMUSG00000031016.8|WEE 1 homolog 1 (S. pombe)
mm10_v2_chr3_+_41555723_41555745	0.00429848	UGCAUUG	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr18_+_69345721_69345811	0.00407237	UGCAUUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr19_+_43440404_43440447	0.00405589	UGCAUUG	ENSMUST00000165311.1|Cnnm1|ENSMUSG00000025189.8|cyclin M1
mm10_v2_chr7_+_49910112_49910146	0.00394336	UGCAUUG	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr17_+_29032664_29032681	0.00382506	UGCAUUG	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr3_+_146852359_146852438	0.00373853	UGCAUUG	ENSMUST00000038090.5|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7 	ENSMUST00000170055.1|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7
mm10_v2_chr14_-_30353468_30353535	0.00314699	UGCAUUG	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr18_-_12236301_12236405	0.00311593	UGCAUUG	ENSMUST00000025279.5|Npc1|ENSMUSG00000024413.7|Niemann Pick type C1
mm10_v2_chr10_-_120476469_120476527	0.00294141	UGCAUUG	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr13_+_9093893_9093927	0.00287584	UGCAUUG	ENSMUST00000091829.2|Larp4b|ENSMUSG00000033499.7|La ribonucleoprotein domain family, member 4B
mm10_v2_chr1_+_6487231_6487338	0.00285621	UGCAUUG	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr11_+_105589970_105590028	0.00278876	UGCAUUG	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr6_-_51469869_51469894	0.00270802	UGCAUUG	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr13_-_48968004_48968029	0.00267638	UGCAUUG	ENSMUST00000060805.6|Fam120a|ENSMUSG00000038014.7|family with sequence similarity 120, member A
mm10_v2_chr3_-_116253467_116253484	0.00259589	UGCAUUG	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr1_-_180813591_180813632	0.00256096	UGCAUUG	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr7_-_132852657_132852673	0.00255862	UGCAUUG	ENSMUST00000033257.8|Mettl10|ENSMUSG00000030960.10|methyltransferase like 10
mm10_v2_chr7_+_47050628_47050646	0.00249674	UGCAUUG	ENSMUST00000010451.5|Tmem86a|ENSMUSG00000010307.5|transmembrane protein 86A
mm10_v2_chr10_+_80494835_80494873	0.00242531	UGCAUUG	ENSMUST00000051773.8|Onecut3|ENSMUSG00000045518.8|one cut domain, family member 3
mm10_v2_chr6_-_28134545_28134545	0.00235539	UGCAUUG	ENSMUST00000115323.1|Grm8|ENSMUSG00000024211.9|glutamate receptor, metabotropic 8
mm10_v2_chr8_-_121652895_121652913	0.00224995	UGCAUUG	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr11_-_120991305_120991339	0.0022146	UGCAUUG	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr2_-_74578875_74578954	0.00216952	UGCAUUG	ENSMUST00000134168.1|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000111993.2|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000064503.6|Lnp|ENSMUSG00000009207.9|limb and neural patterns
mm10_v2_chr15_+_44619551_44619641	0.00206313	UGCAUUG	ENSMUST00000022964.7|Ebag9|ENSMUSG00000022339.8|estrogen receptor-binding fragment-associated gene 9
mm10_v2_chr17_+_80944611_80944644	0.00194861	UGCAUUG	ENSMUST00000025092.4|Tmem178|ENSMUSG00000024245.4|transmembrane protein 178
mm10_v2_chr9_+_53537021_53537074	0.00194689	UGCAUUG	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr5_-_89883321_89883343	0.00179745	UGCAUUG	ENSMUST00000163159.1|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 	ENSMUST00000061427.5|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm10_v2_chr1_-_25228814_25228834	0.00175141	UGCAUUG	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr14_+_46882854_46882973	0.00168062	UGCAUUG	ENSMUST00000022386.8|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4 	ENSMUST00000100672.3|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4
mm10_v2_chr17_-_66077022_66077081	0.00165513	UGCAUUG	ENSMUST00000150766.1|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12 	ENSMUST00000038116.5|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12
mm10_v2_chr11_-_79530569_79530609	0.00164358	UGCAUUG	ENSMUST00000103236.3|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a 	ENSMUST00000170422.2|Evi2b|ENSMUSG00000093938.1|ecotropic viral integration site 2b 	ENSMUST00000170799.1|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a
mm10_v2_chr17_+_27655572_27655622	0.00153814	UGCAUUG	ENSMUST00000045896.3|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr6_+_38433913_38433965	0.00153045	UGCAUUG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr13_-_105054895_105054930	0.00152342	UGCAUUG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr5_+_30155243_30155311	0.0015197	UGCAUUG	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr11_+_31872100_31872226	0.0015103	UGCAUUG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr9_+_96196246_96196280	0.00145281	UGCAUUG	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chrX_+_13280970_13281031	0.00133477	UGCAUUG	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr13_-_60177357_60177373	0.00128613	UGCAUUG	ENSMUST00000065086.4|Gas1|ENSMUSG00000052957.7|growth arrest specific 1
mm10_v2_chr7_+_123982799_123982869	0.00127736	UGCAUUG	ENSMUST00000106437.1|Hs3st4|ENSMUSG00000078591.1|heparan sulfate (glucosamine) 3-O-sulfotransferase 4
mm10_v2_chr10_-_67548944_67549001	0.00125862	UGCAUUG	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chr5_+_88720855_88720876	0.00123321	UGCAUUG	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr1_-_77515048_77515102	0.00102493	UGCAUUG	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr8_-_104443001_104443047	0.000960502	UGCAUUG	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr2_-_48949206_48949276	0.00083202	UGCAUUG	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr2_-_6884975_6884996	0.000807991	UGCAUUG	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr19_+_22448242_22448283	0.000804065	UGCAUUG	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr7_-_141429351_141429429	0.000795462	UGCAUUG	ENSMUST00000164387.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000137488.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000084436.3|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chrX_-_103981242_103981287	0.000785799	UGCAUUG	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr2_-_181459364_181459439	0.000705396	UGCAUUG	ENSMUST00000155535.1|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000029106.6|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000087409.3|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46
mm10_v2_chr3_-_115715031_115715062	0.000698867	UGCAUUG	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr11_-_47379405_47379522	0.000678637	UGCAUUG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr2_-_154892887_154892935	0.000674139	UGCAUUG	ENSMUST00000099173.4|Eif2s2|ENSMUSG00000074656.6|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm10_v2_chr5_-_102069905_102069940	0.000657381	UGCAUUG	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr17_+_26715644_26715724	0.000606953	UGCAUUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr17_-_10319324_10319380	0.000503595	UGCAUUG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chrM_+_3906_3926	0.000485015	UGCAUUG	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chrX_+_75416628_75416649	0.000448886	UGCAUUG	ENSMUST00000033544.7|Brcc3|ENSMUSG00000031201.11|BRCA1/BRCA2-containing complex, subunit 3
mm10_v2_chr14_-_61439831_61439947	0.000428765	UGCAUUG	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr3_-_116808166_116808198	0.000346999	UGCAUUG	ENSMUST00000040603.7|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr15_+_58933774_58933836	0.000286798	UGCAUUG	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr1_+_39900883_39900963	0.000286226	UGCAUUG	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr4_-_134287215_134287258	0.000126919	UGCAUUG	ENSMUST00000145006.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105877.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000127857.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105876.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like
mm10_v2_chr12_+_33957645_33957671	6.32168e-05	UGCAUUG	ENSMUST00000049089.5|Twist1|ENSMUSG00000035799.5|twist basic helix-loop-helix transcription factor 1
mm10_v2_chr15_+_7811011_7811011	3.7315e-05	UGCAUUG	ENSMUST00000022744.3|Gdnf|ENSMUSG00000022144.3|glial cell line derived neurotrophic factor
mm10_v2_chr13_-_96670838_96670936	2.37293e-05	UGCAUUG	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
