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avrg: GFI1 WT vs 36n/n vs KD

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Results for ACUGGCC

Z-value: 0.35

Motif logo

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miRNA associated with seed ACUGGCC

NamemiRBASE accession
mmu-miR-193a-3p
MIMAT0000223
mmu-miR-193b-3p
MIMAT0004859

Activity profile of ACUGGCC motif

Sorted Z-values of ACUGGCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_90705212 0.18 ENSMUST00000082432.6
Dio2
deiodinase, iodothyronine, type II
chr5_+_75735576 0.17 ENSMUST00000144270.8
ENSMUST00000005815.7
Kit
KIT proto-oncogene receptor tyrosine kinase
chr1_-_153208477 0.14 ENSMUST00000027752.15
Lamc1
laminin, gamma 1
chr9_+_106048116 0.14 ENSMUST00000020490.13
Wdr82
WD repeat domain containing 82
chr18_+_69478790 0.12 ENSMUST00000202116.4
ENSMUST00000114982.8
ENSMUST00000078486.13
ENSMUST00000202772.4
ENSMUST00000201288.4
Tcf4
transcription factor 4
chr2_+_109747984 0.12 ENSMUST00000046548.14
ENSMUST00000111037.3
Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
chr11_-_51541610 0.11 ENSMUST00000142721.2
ENSMUST00000156835.8
ENSMUST00000001080.16
N4bp3
NEDD4 binding protein 3
chr18_+_78392969 0.11 ENSMUST00000164064.2
Gm6133
predicted gene 6133
chr10_+_128626772 0.09 ENSMUST00000219404.2
ENSMUST00000026411.8
Mmp19
matrix metallopeptidase 19
chr1_+_93731662 0.09 ENSMUST00000027505.13
Ing5
inhibitor of growth family, member 5
chr1_+_43137852 0.08 ENSMUST00000010434.8
AI597479
expressed sequence AI597479
chr11_+_105927698 0.08 ENSMUST00000058438.9
Dcaf7
DDB1 and CUL4 associated factor 7
chr11_-_49603501 0.08 ENSMUST00000020624.7
ENSMUST00000145353.8
Cnot6
CCR4-NOT transcription complex, subunit 6
chr16_+_20354225 0.07 ENSMUST00000090023.13
ENSMUST00000007216.9
ENSMUST00000232001.2
Ap2m1
adaptor-related protein complex 2, mu 1 subunit
chr14_+_48683797 0.07 ENSMUST00000111735.10
Tmem260
transmembrane protein 260
chr6_+_7844759 0.06 ENSMUST00000040159.6
C1galt1
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
chr11_-_87878301 0.05 ENSMUST00000020775.9
Dynll2
dynein light chain LC8-type 2
chr12_+_100165694 0.05 ENSMUST00000110082.11
Calm1
calmodulin 1
chr3_-_105867415 0.04 ENSMUST00000118209.8
Atp5pb
ATP synthase peripheral stalk-membrane subunit b
chr11_+_60428788 0.04 ENSMUST00000044250.4
Alkbh5
alkB homolog 5, RNA demethylase
chr9_+_32607301 0.04 ENSMUST00000034534.13
ENSMUST00000050797.14
ENSMUST00000184887.2
Ets1
E26 avian leukemia oncogene 1, 5' domain
chr9_-_79700660 0.04 ENSMUST00000034878.12
Tmem30a
transmembrane protein 30A
chr8_-_65302657 0.04 ENSMUST00000034017.9
Klhl2
kelch-like 2, Mayven
chr10_-_94780695 0.04 ENSMUST00000099337.5
Plxnc1
plexin C1
chr5_-_139311371 0.04 ENSMUST00000110865.2
Adap1
ArfGAP with dual PH domains 1
chr2_-_60793536 0.03 ENSMUST00000028347.13
Rbms1
RNA binding motif, single stranded interacting protein 1
chr2_-_103627937 0.03 ENSMUST00000028607.13
Caprin1
cell cycle associated protein 1
chr6_-_87827993 0.03 ENSMUST00000204890.3
ENSMUST00000113617.3
ENSMUST00000113619.8
ENSMUST00000204653.3
ENSMUST00000032138.15
Cnbp
cellular nucleic acid binding protein
chr3_+_151916059 0.03 ENSMUST00000166984.8
Fubp1
far upstream element (FUSE) binding protein 1
chr2_+_173918715 0.03 ENSMUST00000087908.10
ENSMUST00000044638.13
ENSMUST00000156054.2
Stx16
syntaxin 16
chr4_-_141518202 0.03 ENSMUST00000038014.11
ENSMUST00000153880.2
Dnajc16
DnaJ heat shock protein family (Hsp40) member C16
chr6_-_145195903 0.03 ENSMUST00000111710.8
ENSMUST00000155145.2
ENSMUST00000032399.12
ENSMUST00000203147.3
Kras
Kirsten rat sarcoma viral oncogene homolog
chr4_-_118148537 0.03 ENSMUST00000049074.13
Ptprf
protein tyrosine phosphatase, receptor type, F
chr10_+_92996686 0.02 ENSMUST00000069965.9
Cdk17
cyclin-dependent kinase 17
chr8_-_87472562 0.02 ENSMUST00000045296.6
Siah1a
siah E3 ubiquitin protein ligase 1A
chr15_-_36794741 0.02 ENSMUST00000110361.8
ENSMUST00000022894.14
ENSMUST00000110359.2
Ywhaz
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr3_-_94490023 0.02 ENSMUST00000029783.16
Snx27
sorting nexin family member 27
chr11_+_110956980 0.02 ENSMUST00000042970.3
Kcnj2
potassium inwardly-rectifying channel, subfamily J, member 2
chr12_-_86931529 0.02 ENSMUST00000038422.8
Irf2bpl
interferon regulatory factor 2 binding protein-like
chr2_+_24257576 0.02 ENSMUST00000140547.2
ENSMUST00000102942.8
Psd4
pleckstrin and Sec7 domain containing 4
chr2_+_162773440 0.02 ENSMUST00000130411.7
ENSMUST00000126163.3
Srsf6
serine and arginine-rich splicing factor 6
chr9_+_35332837 0.02 ENSMUST00000119129.10
Cdon
cell adhesion molecule-related/down-regulated by oncogenes
chr12_-_15866763 0.01 ENSMUST00000020922.8
ENSMUST00000221215.2
ENSMUST00000221518.2
Trib2
tribbles pseudokinase 2
chr10_+_69369590 0.01 ENSMUST00000182884.8
Ank3
ankyrin 3, epithelial
chr9_+_113760002 0.01 ENSMUST00000084885.12
ENSMUST00000009885.14
Ubp1
upstream binding protein 1
chr9_+_108673171 0.01 ENSMUST00000195514.6
ENSMUST00000085018.6
ENSMUST00000192028.6
Ip6k2
inositol hexaphosphate kinase 2
chr13_+_49495025 0.01 ENSMUST00000048544.14
ENSMUST00000110084.4
ENSMUST00000110085.11
Bicd2
BICD cargo adaptor 2
chr19_+_32734884 0.01 ENSMUST00000013807.8
Pten
phosphatase and tensin homolog
chr7_-_115837034 0.01 ENSMUST00000182834.8
Plekha7
pleckstrin homology domain containing, family A member 7
chr12_+_98594388 0.01 ENSMUST00000048402.12
ENSMUST00000101144.10
ENSMUST00000101146.4
Spata7
spermatogenesis associated 7
chr10_-_128727542 0.01 ENSMUST00000026408.7
Gdf11
growth differentiation factor 11
chr12_+_16860931 0.01 ENSMUST00000020908.9
E2f6
E2F transcription factor 6
chr6_+_134012602 0.01 ENSMUST00000081028.13
ENSMUST00000111963.8
Etv6
ets variant 6
chr5_+_28370687 0.01 ENSMUST00000036177.9
En2
engrailed 2
chr3_-_95135946 0.01 ENSMUST00000065482.6
Mllt11
myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr9_+_68561042 0.01 ENSMUST00000034766.14
Rora
RAR-related orphan receptor alpha
chr17_+_9020522 0.01 ENSMUST00000089085.10
Pde10a
phosphodiesterase 10A
chrX_+_9751861 0.00 ENSMUST00000067529.9
ENSMUST00000086165.4
Sytl5
synaptotagmin-like 5
chr3_-_153430741 0.00 ENSMUST00000064460.7
ENSMUST00000200397.5
St6galnac3
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr19_-_41790458 0.00 ENSMUST00000026150.15
ENSMUST00000163265.9
ENSMUST00000177495.2
Arhgap19
Rho GTPase activating protein 19
chr12_-_12991828 0.00 ENSMUST00000043396.15
Mycn
v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
chr10_-_39009844 0.00 ENSMUST00000134279.8
ENSMUST00000139743.8
ENSMUST00000149949.8
ENSMUST00000124941.8
ENSMUST00000125042.8
ENSMUST00000063204.9
Fam229b
family with sequence similarity 229, member B
chr18_+_38383297 0.00 ENSMUST00000025314.7
ENSMUST00000236078.2
Dele1
DAP3 binding cell death enhancer 1
chr1_+_187730018 0.00 ENSMUST00000027906.13
Esrrg
estrogen-related receptor gamma
chr11_-_98436626 0.00 ENSMUST00000103141.4
Ikzf3
IKAROS family zinc finger 3
chr6_-_143892814 0.00 ENSMUST00000124233.7
ENSMUST00000144289.4
ENSMUST00000111748.8
Sox5
SRY (sex determining region Y)-box 5
chr4_+_13743424 0.00 ENSMUST00000006761.10
Runx1t1
RUNX1 translocation partner 1
chr2_-_140513382 0.00 ENSMUST00000110057.3
Flrt3
fibronectin leucine rich transmembrane protein 3
chr12_+_110452222 0.00 ENSMUST00000084985.11
ENSMUST00000221074.2
Ppp2r5c
protein phosphatase 2, regulatory subunit B', gamma
chr4_+_15881256 0.00 ENSMUST00000029876.2
Calb1
calbindin 1
chr5_-_103247920 0.00 ENSMUST00000112848.8
Mapk10
mitogen-activated protein kinase 10
chr10_-_108846816 0.00 ENSMUST00000105276.8
ENSMUST00000064054.14
Syt1
synaptotagmin I

Network of associatons between targets according to the STRING database.

First level regulatory network of ACUGGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0070460 thyroid-stimulating hormone secretion(GO:0070460)
0.0 0.1 GO:0061290 cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204)
0.0 0.2 GO:1904349 positive regulation of small intestine smooth muscle contraction(GO:1904349)
0.0 0.1 GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay(GO:0070966)
0.0 0.1 GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0043259 laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259)
0.0 0.1 GO:0072357 PTW/PP1 phosphatase complex(GO:0072357)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0004800 thyroxine 5'-deiodinase activity(GO:0004800)
0.0 0.2 GO:0004716 receptor signaling protein tyrosine kinase activity(GO:0004716)
0.0 0.1 GO:0043208 glycosphingolipid binding(GO:0043208)
0.0 0.0 GO:0031800 type 3 metabotropic glutamate receptor binding(GO:0031800)