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avrg: GFI1 WT vs 36n/n vs KD

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Results for Clock

Z-value: 0.32

Motif logo

Transcription factors associated with Clock

Gene Symbol Gene ID Gene Info
ENSMUSG00000029238.12 circadian locomotor output cycles kaput

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Clockmm39_v1_chr5_-_76452577_764526440.751.5e-01Click!

Activity profile of Clock motif

Sorted Z-values of Clock motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_68986043 0.33 ENSMUST00000101004.9
period circadian clock 1
chr7_-_68398989 0.33 ENSMUST00000048068.15
arrestin domain containing 4
chr13_-_12355604 0.23 ENSMUST00000168193.8
ENSMUST00000064204.14
actinin alpha 2
chr4_-_57143437 0.20 ENSMUST00000095076.10
ENSMUST00000030142.4
erythrocyte membrane protein band 4.1 like 4b
chr10_+_22034460 0.19 ENSMUST00000181645.8
ENSMUST00000105522.9
retinoic acid early transcript 1E
histocompatibility 60b
chr12_+_24701273 0.18 ENSMUST00000020982.7
Kruppel-like factor 11
chr8_-_46452896 0.17 ENSMUST00000053558.10
ankyrin repeat domain 37
chr7_-_68398917 0.16 ENSMUST00000118110.3
arrestin domain containing 4
chr4_+_107825529 0.11 ENSMUST00000106713.5
ENSMUST00000238795.2
solute carrier family 1 (glutamate transporter), member 7
chr4_-_133484080 0.11 ENSMUST00000008024.7
AT rich interactive domain 1A (SWI-like)
chr8_+_108669276 0.10 ENSMUST00000220518.2
zinc finger homeobox 3
chr15_-_102533870 0.09 ENSMUST00000184485.8
ENSMUST00000185070.8
ENSMUST00000184616.8
ENSMUST00000108828.9
activating transcription factor 7
chr17_+_47922497 0.09 ENSMUST00000024778.3
mediator complex subunit 20
chr2_-_130748259 0.09 ENSMUST00000128176.2
ENSMUST00000133766.2
ENSMUST00000135110.2
ENSMUST00000146975.2
RIKEN cDNA A730017L22 gene
RIKEN cDNA 4930402H24 gene
chr13_+_20369377 0.09 ENSMUST00000221067.2
engulfment and cell motility 1
chr2_-_38816229 0.08 ENSMUST00000076275.11
ENSMUST00000142130.2
nuclear receptor subfamily 6, group A, member 1
chr19_-_29782907 0.08 ENSMUST00000175726.8
RIKEN cDNA 9930021J03 gene
chr7_-_144493560 0.08 ENSMUST00000093962.5
cyclin D1
chr9_-_57513510 0.07 ENSMUST00000215487.2
ENSMUST00000045068.10
complexin 3
chr6_-_91450486 0.07 ENSMUST00000040835.9
coiled-coil-helix-coiled-coil-helix domain containing 4
chr5_-_74692327 0.07 ENSMUST00000072857.13
ENSMUST00000113542.9
ENSMUST00000151474.3
Sec1 family domain containing 2
chr16_+_43710163 0.07 ENSMUST00000132859.8
ENSMUST00000178400.9
coiled-coil domain containing 191
chrX_+_7439839 0.07 ENSMUST00000144719.9
ENSMUST00000234896.2
Foxp3 regulating long intergenic noncoding RNA
forkhead box P3
chr5_-_46014809 0.07 ENSMUST00000190036.7
ENSMUST00000189859.7
ENSMUST00000186633.3
ENSMUST00000016026.14
ENSMUST00000045586.13
ENSMUST00000238522.2
ligand dependent nuclear receptor corepressor-like
chr16_+_3854806 0.06 ENSMUST00000137748.8
ENSMUST00000006136.11
ENSMUST00000157044.8
ENSMUST00000120009.8
deoxyribonuclease I
chr4_+_44756553 0.06 ENSMUST00000107824.9
zinc finger, CCHC domain containing 7
chr19_+_46044972 0.06 ENSMUST00000111899.8
ENSMUST00000099392.10
ENSMUST00000062322.11
peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr17_+_35220252 0.06 ENSMUST00000174260.8
valyl-tRNA synthetase
chr16_+_35590745 0.06 ENSMUST00000231579.2
Hspb associated protein 1
chr17_-_66384017 0.06 ENSMUST00000150766.2
ENSMUST00000038116.13
ankyrin repeat domain 12
chr2_+_48839505 0.05 ENSMUST00000112745.8
ENSMUST00000112754.8
methyl-CpG binding domain protein 5
chrX_+_8137881 0.05 ENSMUST00000115590.2
solute carrier family 38, member 5
chr17_-_28705055 0.05 ENSMUST00000233870.2
FK506 binding protein 5
chr11_+_74721733 0.05 ENSMUST00000000291.9
max binding protein
chr19_+_9995557 0.05 ENSMUST00000113161.10
ENSMUST00000238672.2
ENSMUST00000117641.8
RAB3A interacting protein (rabin3)-like 1
chr7_-_29204812 0.05 ENSMUST00000183096.8
ENSMUST00000085809.11
signal-induced proliferation-associated 1 like 3
chr2_+_32285908 0.05 ENSMUST00000028162.5
prostaglandin E synthase 2
chr4_+_44756608 0.05 ENSMUST00000143385.2
zinc finger, CCHC domain containing 7
chr6_+_17463819 0.05 ENSMUST00000140070.8
met proto-oncogene
chr2_-_130266162 0.05 ENSMUST00000089581.11
PC-esterase domain containing 1A
chr7_-_126294902 0.05 ENSMUST00000144897.2
SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
chr11_-_118180895 0.05 ENSMUST00000144153.8
ubiquitin specific peptidase 36
chr14_+_4230658 0.05 ENSMUST00000225491.2
nuclear receptor subfamily 1, group D, member 2
chr11_-_118181044 0.05 ENSMUST00000106296.9
ENSMUST00000092382.10
ubiquitin specific peptidase 36
chr7_-_46445085 0.05 ENSMUST00000123725.2
HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr19_+_46045675 0.05 ENSMUST00000126127.8
ENSMUST00000147640.2
peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr15_+_80556023 0.04 ENSMUST00000023044.7
family with sequence similarity 83, member F
chr12_-_32000534 0.04 ENSMUST00000172314.9
high mobility group box transcription factor 1
chr15_+_103148824 0.04 ENSMUST00000036004.16
ENSMUST00000087351.9
ENSMUST00000231141.2
heterogeneous nuclear ribonucleoprotein A1
chr11_+_106680062 0.04 ENSMUST00000103068.10
ENSMUST00000018516.11
centrosomal protein 95
chr3_-_101195213 0.04 ENSMUST00000029456.5
CD2 antigen
chr4_-_155947819 0.04 ENSMUST00000030949.4
taste receptor, type 1, member 3
chr2_+_14234198 0.04 ENSMUST00000028045.4
mannose receptor, C type 1
chr18_-_60981981 0.04 ENSMUST00000177172.8
ENSMUST00000175934.8
ENSMUST00000176630.8
treacle ribosome biogenesis factor 1
chr14_-_78970160 0.04 ENSMUST00000226342.3
diacylglycerol kinase, eta
chr7_+_66489465 0.04 ENSMUST00000098382.10
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr9_+_14695933 0.04 ENSMUST00000034405.11
ENSMUST00000115632.10
ENSMUST00000147305.2
MRE11A homolog A, double strand break repair nuclease
chr16_-_44978986 0.03 ENSMUST00000180636.8
solute carrier family 35, member A5
chr19_-_29790352 0.03 ENSMUST00000099525.5
RAN binding protein 6
chr5_-_137784912 0.03 ENSMUST00000031740.16
methylphosphate capping enzyme
chr9_+_40712562 0.03 ENSMUST00000117557.8
heat shock protein 8
chr3_-_108117754 0.03 ENSMUST00000117784.8
ENSMUST00000119650.8
ENSMUST00000117409.8
ataxin 7-like 2
chr2_+_18059982 0.03 ENSMUST00000028076.15
myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr1_-_166237341 0.03 ENSMUST00000135673.8
ENSMUST00000169324.8
ENSMUST00000128861.3
pogo transposable element with KRAB domain
chr1_+_181180183 0.03 ENSMUST00000161880.8
ENSMUST00000027795.14
cornichon family AMPA receptor auxiliary protein 3
chr4_+_32657105 0.03 ENSMUST00000071642.11
ENSMUST00000178134.2
midasin AAA ATPase 1
chr8_+_91555449 0.03 ENSMUST00000109614.9
chromodomain helicase DNA binding protein 9
chr5_+_146168020 0.03 ENSMUST00000161181.8
ENSMUST00000161652.8
ENSMUST00000031640.15
ENSMUST00000159467.2
cyclin-dependent kinase 8
chr11_+_69231589 0.03 ENSMUST00000218008.2
ENSMUST00000151617.3
ring finger protein 227
chr10_+_69048914 0.03 ENSMUST00000163497.8
ENSMUST00000164212.8
ENSMUST00000067908.14
Rho-related BTB domain containing 1
chr7_+_66489500 0.03 ENSMUST00000107478.9
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr18_+_42644552 0.03 ENSMUST00000237602.2
ENSMUST00000236088.2
ENSMUST00000025375.15
transcription elongation regulator 1 (CA150)
chr4_+_97665992 0.03 ENSMUST00000107062.9
ENSMUST00000052018.12
ENSMUST00000107057.8
nuclear factor I/A
chr7_+_19311212 0.03 ENSMUST00000108453.2
zinc finger protein 296
chr5_+_3391477 0.02 ENSMUST00000199156.2
cyclin-dependent kinase 6
chr7_-_46445305 0.02 ENSMUST00000107653.8
ENSMUST00000107654.8
ENSMUST00000014562.14
ENSMUST00000152759.8
HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr6_+_17463925 0.02 ENSMUST00000115442.8
met proto-oncogene
chr4_-_131802606 0.02 ENSMUST00000146021.8
erythrocyte membrane protein band 4.1
chr16_-_43709968 0.02 ENSMUST00000023387.14
queuine tRNA-ribosyltransferase accessory subunit 2
chr15_+_81695615 0.02 ENSMUST00000023024.8
thyrotroph embryonic factor
chr2_-_32584132 0.02 ENSMUST00000028148.11
folylpolyglutamyl synthetase
chr5_+_45650821 0.02 ENSMUST00000198534.2
leucine aminopeptidase 3
chr3_-_58599812 0.02 ENSMUST00000070368.8
siah E3 ubiquitin protein ligase 2
chr16_+_43710299 0.02 ENSMUST00000151183.2
coiled-coil domain containing 191
chr4_-_131802561 0.02 ENSMUST00000105970.8
ENSMUST00000105975.8
erythrocyte membrane protein band 4.1
chr12_-_71183371 0.02 ENSMUST00000221367.2
ENSMUST00000220482.2
ENSMUST00000221892.2
ENSMUST00000221178.2
ENSMUST00000221559.2
ENSMUST00000166120.9
ENSMUST00000021486.10
ENSMUST00000221797.2
ENSMUST00000221815.2
translocase of inner mitochondrial membrane 9
chr2_-_118380149 0.02 ENSMUST00000090219.13
BCL2 modifying factor
chr2_+_115412148 0.02 ENSMUST00000166472.8
ENSMUST00000110918.3
CDAN1 interacting nuclease 1
chr8_+_121854566 0.02 ENSMUST00000181609.2
forkhead box L1
chr12_+_17594795 0.02 ENSMUST00000171737.3
ornithine decarboxylase, structural 1
chr8_-_37081091 0.02 ENSMUST00000033923.14
deleted in liver cancer 1
chr16_-_44979013 0.02 ENSMUST00000023344.10
solute carrier family 35, member A5
chr1_-_13061333 0.02 ENSMUST00000115403.9
ENSMUST00000136197.8
ENSMUST00000115402.8
solute carrier organic anion transporter family, member 5A1
chr17_-_47922374 0.02 ENSMUST00000024783.9
bystin-like
chrX_-_94488394 0.02 ENSMUST00000084535.6
APC membrane recruitment 1
chr12_+_102094977 0.02 ENSMUST00000159329.8
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
chr10_+_69048464 0.02 ENSMUST00000020101.12
Rho-related BTB domain containing 1
chr11_-_51647204 0.02 ENSMUST00000109092.8
ENSMUST00000064297.5
Sec24 related gene family, member A (S. cerevisiae)
chr19_+_26600820 0.02 ENSMUST00000176584.2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr11_+_70735751 0.02 ENSMUST00000177731.8
ENSMUST00000108533.10
ENSMUST00000081362.13
ENSMUST00000178245.2
rabaptin, RAB GTPase binding effector protein 1
chr2_-_168048984 0.02 ENSMUST00000088001.6
activity-dependent neuroprotective protein
chr9_+_43978290 0.01 ENSMUST00000034508.14
ubiquitin specific peptidase 2
chr5_+_135197228 0.01 ENSMUST00000111187.10
ENSMUST00000111188.5
ENSMUST00000202606.3
B cell CLL/lymphoma 7B
chr5_+_135197137 0.01 ENSMUST00000031692.12
B cell CLL/lymphoma 7B
chr2_-_163261439 0.01 ENSMUST00000046908.10
oxidative stress responsive serine rich 1
chrX_-_47297436 0.01 ENSMUST00000037960.11
zinc finger, DHHC domain containing 9
chr11_+_74540284 0.01 ENSMUST00000117818.2
ENSMUST00000092915.12
clustered mitochondria (cluA/CLU1) homolog
chr4_-_145041710 0.01 ENSMUST00000030339.13
tumor necrosis factor receptor superfamily, member 8
chr17_-_24428351 0.01 ENSMUST00000024931.6
netrin 3
chr11_+_72332167 0.01 ENSMUST00000045633.6
MYB binding protein (P160) 1a
chr11_-_101676076 0.01 ENSMUST00000164750.8
ENSMUST00000107176.8
ENSMUST00000017868.7
ets variant 4
chr5_+_77099154 0.01 ENSMUST00000031160.16
ENSMUST00000120912.8
ENSMUST00000117536.8
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr16_+_18695787 0.01 ENSMUST00000120532.9
ENSMUST00000004222.14
histone cell cycle regulator
chr7_+_127345909 0.01 ENSMUST00000033081.14
F-box and leucine-rich repeat protein 19
chr6_+_17463748 0.01 ENSMUST00000115443.8
met proto-oncogene
chr14_-_20718337 0.01 ENSMUST00000057090.12
ENSMUST00000117386.2
synaptopodin 2-like
chr2_-_48839218 0.01 ENSMUST00000090976.10
ENSMUST00000149679.8
origin recognition complex, subunit 4
chr12_+_71183622 0.01 ENSMUST00000149564.8
RIKEN cDNA 2700049A03 gene
chr18_+_35686424 0.01 ENSMUST00000235679.2
ENSMUST00000235176.2
ENSMUST00000235801.2
ENSMUST00000237592.2
ENSMUST00000237230.2
ENSMUST00000237589.2
small nucleolar RNA host gene 4
small nucleolar RNA host gene 4
chr6_-_77956499 0.01 ENSMUST00000159626.8
ENSMUST00000075340.12
ENSMUST00000162273.2
catenin (cadherin associated protein), alpha 2
chrX_+_8137620 0.01 ENSMUST00000033512.11
solute carrier family 38, member 5
chr18_+_67597929 0.01 ENSMUST00000025411.9
PRELI domain containing 3A
chr13_-_76091931 0.01 ENSMUST00000022078.12
ENSMUST00000109606.3
Rho-related BTB domain containing 3
chr12_+_59178072 0.01 ENSMUST00000176464.8
ENSMUST00000170992.9
ENSMUST00000176322.8
MIA SH3 domain ER export factor 2
chr9_-_14695801 0.01 ENSMUST00000214979.2
ENSMUST00000216037.2
ENSMUST00000214456.2
ankyrin repeat domain 49
chrX_+_8137372 0.01 ENSMUST00000127103.8
ENSMUST00000115591.8
solute carrier family 38, member 5
chr13_-_63712140 0.01 ENSMUST00000195756.6
patched 1
chr11_+_78069528 0.01 ENSMUST00000108338.2
TLC domain containing 1
chr6_-_99703344 0.01 ENSMUST00000008273.8
ENSMUST00000101120.11
ENSMUST00000203738.2
prokineticin 2
chr3_+_41519289 0.01 ENSMUST00000168086.7
jade family PHD finger 1
chr11_-_51647290 0.01 ENSMUST00000109097.9
Sec24 related gene family, member A (S. cerevisiae)
chr11_-_100650566 0.01 ENSMUST00000107361.9
potassium voltage-gated channel, subfamily H (eag-related), member 4
chr6_+_125073108 0.01 ENSMUST00000112390.8
chromodomain helicase DNA binding protein 4
chr1_+_59724108 0.01 ENSMUST00000027174.10
ENSMUST00000190231.7
ENSMUST00000191142.7
ENSMUST00000185772.7
NOP58 ribonucleoprotein
chr7_-_98010478 0.01 ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000206414.2
ENSMUST00000167405.3
tsukushi, small leucine rich proteoglycan
chr1_-_181039509 0.01 ENSMUST00000162819.9
ENSMUST00000237749.2
WD repeat domain 26
chr19_-_41969558 0.01 ENSMUST00000026168.9
ENSMUST00000171561.8
MMS19 cytosolic iron-sulfur assembly component
chr8_+_123912976 0.01 ENSMUST00000019422.6
dipeptidase 1
chr17_+_43327412 0.00 ENSMUST00000024708.6
tumor necrosis factor receptor superfamily, member 21
chr11_-_100650768 0.00 ENSMUST00000107363.3
potassium voltage-gated channel, subfamily H (eag-related), member 4
chr5_+_77099229 0.00 ENSMUST00000141687.2
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chrX_-_92675719 0.00 ENSMUST00000006856.3
polymerase (DNA directed), alpha 1
chr11_-_60307847 0.00 ENSMUST00000108721.9
ENSMUST00000239016.2
ATP synthase mitochondrial F1 complex assembly factor 2
chr7_-_34914675 0.00 ENSMUST00000118444.3
ENSMUST00000122409.8
low density lipoprotein receptor-related protein 3
chr12_-_32000209 0.00 ENSMUST00000176084.2
ENSMUST00000176103.8
ENSMUST00000167458.9
high mobility group box transcription factor 1
chrX_+_5959507 0.00 ENSMUST00000103007.4
nudix (nucleoside diphosphate linked moiety X)-type motif 11
chr5_-_77099406 0.00 ENSMUST00000140076.2
phosphoribosyl pyrophosphate amidotransferase
chr10_+_116137277 0.00 ENSMUST00000092167.7
protein tyrosine phosphatase, receptor type, B
chr7_+_25358589 0.00 ENSMUST00000079634.8
ENSMUST00000206561.2
exosome component 5
chr3_+_135531409 0.00 ENSMUST00000180196.8
solute carrier family 39 (metal ion transporter), member 8
chr3_-_95789338 0.00 ENSMUST00000161994.2
circadian associated repressor of transcription
chr3_-_87702469 0.00 ENSMUST00000029712.5
neurotrophic tyrosine kinase, receptor, type 1
chr3_+_40663285 0.00 ENSMUST00000091184.9
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
chrX_-_36127891 0.00 ENSMUST00000115249.10
ENSMUST00000115248.10
RIKEN cDNA C330007P06 gene
chr11_-_77380492 0.00 ENSMUST00000037593.14
ENSMUST00000092892.10
ankyrin repeat domain 13b
chr1_-_186438177 0.00 ENSMUST00000045288.14
transforming growth factor, beta 2
chr11_-_106107132 0.00 ENSMUST00000002043.10
coiled-coil domain containing 47
chr14_-_20231871 0.00 ENSMUST00000024011.10
potassium channel, subfamily K, member 5
chr4_+_106954794 0.00 ENSMUST00000221740.2
CUB domain containing protein 2
chr11_+_76108434 0.00 ENSMUST00000040806.5
diazepam binding inhibitor-like 5
chr11_-_76108316 0.00 ENSMUST00000102500.5
gem nuclear organelle associated protein 4
chr3_+_145281941 0.00 ENSMUST00000199033.5
ENSMUST00000098534.9
ENSMUST00000200574.5
ENSMUST00000196413.5
ENSMUST00000197604.3
zinc finger, HIT type 6
chr5_+_120254530 0.00 ENSMUST00000031590.12
RNA binding motif protein 19

Network of associatons between targets according to the STRING database.

First level regulatory network of Clock

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0051695 actin filament uncapping(GO:0051695)
0.1 0.3 GO:0097167 circadian regulation of translation(GO:0097167)
0.0 0.1 GO:0045041 protein import into mitochondrial intermembrane space(GO:0045041)
0.0 0.1 GO:0002654 positive regulation of tolerance induction dependent upon immune response(GO:0002654) regulation of peripheral tolerance induction(GO:0002658) positive regulation of peripheral tolerance induction(GO:0002660) regulation of peripheral T cell tolerance induction(GO:0002849) positive regulation of peripheral T cell tolerance induction(GO:0002851)
0.0 0.1 GO:1904059 regulation of locomotor rhythm(GO:1904059)
0.0 0.2 GO:0051549 positive regulation of keratinocyte migration(GO:0051549)
0.0 0.0 GO:1904431 positive regulation of t-circle formation(GO:1904431)
0.0 0.1 GO:0060399 positive regulation of growth hormone receptor signaling pathway(GO:0060399)
0.0 0.5 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.1 GO:0070494 regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495)
0.0 0.1 GO:0000320 re-entry into mitotic cell cycle(GO:0000320)
0.0 0.0 GO:0097212 protein targeting to vacuole involved in autophagy(GO:0071211) lysosomal membrane organization(GO:0097212)
0.0 0.1 GO:0089711 L-glutamate transmembrane transport(GO:0089711)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0044214 spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717)
0.0 0.1 GO:0031084 BLOC-2 complex(GO:0031084)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0051373 FATZ binding(GO:0051373)
0.0 0.1 GO:0005008 hepatocyte growth factor-activated receptor activity(GO:0005008)
0.0 0.0 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.0 0.1 GO:0050220 prostaglandin-E synthase activity(GO:0050220)
0.0 0.1 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.0 0.2 GO:0046703 natural killer cell lectin-like receptor binding(GO:0046703)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID CIRCADIAN PATHWAY Circadian rhythm pathway