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avrg: GFI1 WT vs 36n/n vs KD

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Results for GCUGGUG

Z-value: 1.35

Motif logo

miRNA associated with seed GCUGGUG

NamemiRBASE accession
MIMAT0000150

Activity profile of GCUGGUG motif

Sorted Z-values of GCUGGUG motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_98828495 1.31 ENSMUST00000107475.9
ENSMUST00000068133.10
retinoic acid receptor, alpha
chr8_+_83589979 1.29 ENSMUST00000078525.7
ring finger protein 150
chr2_-_38177359 0.75 ENSMUST00000102787.10
DENN/MADD domain containing 1A
chr12_+_76371634 0.70 ENSMUST00000154078.3
ENSMUST00000095610.9
A kinase (PRKA) anchor protein 5
chr12_+_24701273 0.65 ENSMUST00000020982.7
Kruppel-like factor 11
chr8_-_85526653 0.63 ENSMUST00000126806.2
ENSMUST00000076715.13
nuclear factor I/X
chr14_+_34542053 0.62 ENSMUST00000043349.7
glutamate receptor, ionotropic, delta 1
chr6_-_90787100 0.60 ENSMUST00000101151.10
IQ motif and Sec7 domain 1
chr11_-_69304501 0.59 ENSMUST00000094077.5
KDM1 lysine (K)-specific demethylase 6B
chr10_+_52566616 0.54 ENSMUST00000105473.3
solute carrier family 35, member F1
chr8_-_70449018 0.51 ENSMUST00000065169.12
ENSMUST00000212478.2
GATA zinc finger domain containing 2A
chr8_-_112356957 0.47 ENSMUST00000070004.4
lactate dehydrogenase D
chr2_-_33261411 0.47 ENSMUST00000131298.7
ENSMUST00000091039.5
ENSMUST00000042615.13
Ral GEF with PH domain and SH3 binding motif 1
chr15_-_103248512 0.46 ENSMUST00000168828.3
zinc finger protein 385A
chr5_-_145077048 0.46 ENSMUST00000031627.9
PDGFA associated protein 1
chr4_-_132149780 0.45 ENSMUST00000102568.10
phosphatase and actin regulator 4
chr14_+_25459630 0.42 ENSMUST00000162645.8
zinc finger, MIZ-type containing 1
chr7_-_43139390 0.42 ENSMUST00000107974.3
IgLON family member 5
chr5_+_130477642 0.42 ENSMUST00000111288.4
calneuron 1
chr14_+_26300693 0.42 ENSMUST00000203874.3
ENSMUST00000037585.9
DENN/MADD domain containing 6A
chr9_+_56982622 0.39 ENSMUST00000167715.8
transcriptional regulator, SIN3A (yeast)
chr5_-_25703700 0.39 ENSMUST00000173073.8
ENSMUST00000045291.14
ENSMUST00000173174.2
lysine (K)-specific methyltransferase 2C
chr11_+_77985486 0.39 ENSMUST00000073705.12
family with sequence similarity 222, member B
chr8_-_29709652 0.38 ENSMUST00000168630.4
unc-5 netrin receptor D
chr3_+_107008867 0.37 ENSMUST00000038695.6
potassium voltage-gated channel, shaker-related subfamily, member 2
chr10_-_75396164 0.37 ENSMUST00000051129.10
leucine rich repeat containing 75B
chr1_+_136059101 0.35 ENSMUST00000075164.11
kinesin family member 21B
chr15_-_50753061 0.34 ENSMUST00000165201.9
ENSMUST00000184458.8
transcriptional repressor GATA binding 1
chr9_-_29874401 0.34 ENSMUST00000075069.11
neurotrimin
chr7_+_18853778 0.34 ENSMUST00000053109.5
F-box protein 46
chr6_-_113172340 0.32 ENSMUST00000162280.2
lipoma HMGIC fusion partner-like protein 4
chr6_-_112466780 0.32 ENSMUST00000053306.8
oxytocin receptor
chr2_-_45003270 0.32 ENSMUST00000202935.4
ENSMUST00000068415.11
ENSMUST00000127520.8
zinc finger E-box binding homeobox 2
chr5_-_121974913 0.31 ENSMUST00000040308.14
ENSMUST00000086310.8
SH2B adaptor protein 3
chr8_+_27750349 0.31 ENSMUST00000033880.7
eukaryotic translation initiation factor 4E binding protein 1
chr5_+_123532819 0.31 ENSMUST00000111596.8
ENSMUST00000068237.12
MLX interacting protein
chr9_-_75518585 0.30 ENSMUST00000098552.10
ENSMUST00000064433.11
tropomodulin 2
chr3_-_107425316 0.30 ENSMUST00000169449.8
ENSMUST00000029499.15
solute carrier family 6 (neurotransmitter transporter), member 17
chr5_+_147367237 0.29 ENSMUST00000176600.8
PAN3 poly(A) specific ribonuclease subunit
chr9_+_30941924 0.29 ENSMUST00000216649.2
ENSMUST00000115222.10
zinc finger and BTB domain containing 44
chr1_+_6284823 0.29 ENSMUST00000027040.13
RB1-inducible coiled-coil 1
chr15_-_89064936 0.29 ENSMUST00000109331.9
plexin B2
chr6_+_120341055 0.28 ENSMUST00000005108.10
lysine (K)-specific demethylase 5A
chr17_-_35407403 0.28 ENSMUST00000097336.5
leukocyte specific transcript 1
chr1_-_21149392 0.28 ENSMUST00000037998.6
translocating chain-associating membrane protein 2
chr14_-_20027279 0.28 ENSMUST00000160013.8
guanine nucleotide binding protein (G protein), gamma 2
chr11_+_44508137 0.27 ENSMUST00000109268.2
ENSMUST00000101326.10
ENSMUST00000081265.12
early B cell factor 1
chr15_-_68130636 0.27 ENSMUST00000162173.8
ENSMUST00000160248.8
ENSMUST00000162054.9
zinc finger and AT hook domain containing
chr5_+_129578285 0.27 ENSMUST00000053737.9
splicing factor SWAP
chr14_+_30201569 0.27 ENSMUST00000022535.9
ENSMUST00000223658.2
decapping mRNA 1A
chr5_+_32293145 0.27 ENSMUST00000031017.11
fos-like antigen 2
chr1_-_92107971 0.26 ENSMUST00000186002.3
ENSMUST00000097644.9
histone deacetylase 4
chr17_+_6157154 0.26 ENSMUST00000149756.8
tubby like protein 4
chr14_+_62793175 0.26 ENSMUST00000039064.8
family with sequence similarity 124, member A
chr11_+_115272732 0.26 ENSMUST00000053288.6
cerebellar degeneration-related protein 2-like
chr17_-_17845293 0.26 ENSMUST00000041047.4
leucyl/cystinyl aminopeptidase
chr9_-_101128976 0.25 ENSMUST00000075941.12
protein phosphatase 2, regulatory subunit B'', alpha
chr6_+_114620054 0.25 ENSMUST00000032457.17
autophagy related 7
chr4_-_34882917 0.25 ENSMUST00000098163.9
ENSMUST00000047950.6
zinc finger protein 292
chr2_-_153083322 0.25 ENSMUST00000056924.14
pleiomorphic adenoma gene-like 2
chr11_+_74721733 0.25 ENSMUST00000000291.9
max binding protein
chr11_-_103303480 0.24 ENSMUST00000041272.10
pleckstrin homology domain containing, family M (with RUN domain) member 1
chr16_-_62607105 0.24 ENSMUST00000152553.2
ENSMUST00000063089.12
NOL1/NOP2/Sun domain family member 3
chr17_-_43187280 0.24 ENSMUST00000024709.9
ENSMUST00000233476.2
CD2-associated protein
chr9_+_40597297 0.24 ENSMUST00000034522.8
CXADR-like membrane protein
chr4_+_85123654 0.24 ENSMUST00000030212.15
ENSMUST00000107189.8
ENSMUST00000107184.8
SH3-domain GRB2-like 2
chr5_-_51711237 0.24 ENSMUST00000132734.8
peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr1_+_178014983 0.23 ENSMUST00000161075.8
ENSMUST00000027783.14
desumoylating isopeptidase 2
chrX_+_72716756 0.23 ENSMUST00000033752.14
ENSMUST00000114467.9
solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX_+_159551009 0.23 ENSMUST00000033650.14
retinoschisis (X-linked, juvenile) 1 (human)
chr2_+_136555364 0.23 ENSMUST00000028727.11
ENSMUST00000110098.4
synaptosomal-associated protein 25
chr13_+_55097200 0.23 ENSMUST00000026994.14
ENSMUST00000109994.9
unc-5 netrin receptor A
chr18_+_36098090 0.22 ENSMUST00000176873.8
ENSMUST00000177432.8
ENSMUST00000175734.2
pleckstrin and Sec7 domain containing 2
chr15_+_80595486 0.22 ENSMUST00000067689.9
trinucleotide repeat containing 6b
chr12_+_16944896 0.22 ENSMUST00000020904.8
Rho-associated coiled-coil containing protein kinase 2
chr11_-_70578744 0.22 ENSMUST00000108545.9
ENSMUST00000120261.8
calmodulin binding transcription activator 2
chr8_+_23349543 0.22 ENSMUST00000238975.2
ENSMUST00000110696.8
ENSMUST00000044331.7
K(lysine) acetyltransferase 6A
chr3_+_141170941 0.22 ENSMUST00000106236.9
unc-5 netrin receptor C
chr3_-_133250129 0.20 ENSMUST00000196398.5
ENSMUST00000098603.8
tet methylcytosine dioxygenase 2
chr9_-_107512566 0.20 ENSMUST00000055704.12
guanine nucleotide binding protein (G protein), alpha inhibiting 2
chrX_+_100892981 0.20 ENSMUST00000124279.6
ENSMUST00000101339.8
NHS-like 2
chr11_+_70453806 0.19 ENSMUST00000079244.12
ENSMUST00000102558.11
misshapen-like kinase 1 (zebrafish)
chr12_-_46865709 0.19 ENSMUST00000021438.8
NOVA alternative splicing regulator 1
chr9_-_21003268 0.19 ENSMUST00000115487.3
ribonucleoprotein, PTB-binding 1
chr6_-_53045546 0.19 ENSMUST00000074541.6
JAZF zinc finger 1
chr16_+_42727926 0.19 ENSMUST00000151244.8
ENSMUST00000114694.9
zinc finger and BTB domain containing 20
chr19_-_46315543 0.19 ENSMUST00000223917.2
ENSMUST00000224447.2
ENSMUST00000041391.5
ENSMUST00000096029.12
pleckstrin and Sec7 domain containing
chr9_+_100525501 0.18 ENSMUST00000146312.8
ENSMUST00000129269.8
stromal antigen 1
chr17_-_48235560 0.18 ENSMUST00000113265.8
forkhead box P4
chr5_+_108609087 0.18 ENSMUST00000112597.8
ENSMUST00000046975.12
polycomb group ring finger 3
chr14_+_21549798 0.17 ENSMUST00000182855.8
ENSMUST00000182405.9
ENSMUST00000069648.14
K(lysine) acetyltransferase 6B
chr5_-_76452365 0.17 ENSMUST00000075159.5
circadian locomotor output cycles kaput
chr7_-_16348862 0.17 ENSMUST00000171937.2
ENSMUST00000075845.11
Rho GTPase activating protein 35
chr16_+_55895786 0.16 ENSMUST00000049128.11
ENSMUST00000089362.9
ENSMUST00000202799.4
ENSMUST00000201011.2
ENSMUST00000202000.2
SUMO1/sentrin specific peptidase 7
chr13_+_44884740 0.16 ENSMUST00000173246.8
jumonji, AT rich interactive domain 2
chr11_+_31822211 0.16 ENSMUST00000020543.13
ENSMUST00000109412.9
cytoplasmic polyadenylation element binding protein 4
chr19_+_5687503 0.16 ENSMUST00000025867.6
v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chrX_-_142716200 0.16 ENSMUST00000112851.8
ENSMUST00000112856.3
ENSMUST00000033642.10
doublecortin
chr7_-_127837154 0.15 ENSMUST00000078816.5
RIKEN cDNA 9130023H24 gene
chr5_+_134128543 0.15 ENSMUST00000016088.9
cytosolic arginine sensor for mTORC1 subunit 2
chr18_-_75830595 0.15 ENSMUST00000165559.3
CBP80/20-dependent translation initiation factor
chr7_-_65020955 0.15 ENSMUST00000102592.10
tight junction protein 1
chr4_-_44167509 0.15 ENSMUST00000098098.9
ring finger protein 38
chr10_-_81318489 0.15 ENSMUST00000120508.8
ENSMUST00000238823.2
ENSMUST00000118763.8
CUGBP, Elav-like family member 5
chr2_-_39080701 0.15 ENSMUST00000142872.2
ENSMUST00000038874.12
suppressor of cancer cell invasion
chr2_-_17735847 0.15 ENSMUST00000028080.12
nebulette
chr6_+_55428963 0.14 ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000166962.8
adenylate cyclase activating polypeptide 1 receptor 1
chr2_-_63928339 0.14 ENSMUST00000131615.9
fidgetin
chrX_+_72760183 0.14 ENSMUST00000002084.14
ATP-binding cassette, sub-family D (ALD), member 1
chr5_+_14564932 0.14 ENSMUST00000182407.8
ENSMUST00000030691.17
piccolo (presynaptic cytomatrix protein)
chr2_+_154278357 0.14 ENSMUST00000109725.8
ENSMUST00000099178.10
ENSMUST00000045270.15
ENSMUST00000109724.2
CBFA2/RUNX1 translocation partner 2
chr8_+_4543021 0.14 ENSMUST00000176042.2
ENSMUST00000008350.16
ceramide synthase 4
chr17_+_44114894 0.14 ENSMUST00000044895.13
regulator of calcineurin 2
chr2_-_30364219 0.14 ENSMUST00000065134.4
immediate early response 5-like
chr10_-_20600797 0.13 ENSMUST00000020165.14
phosphodiesterase 7B
chr17_+_35345292 0.13 ENSMUST00000061859.7
DNA segment, Chr 17, human D6S53E
chr2_-_163760603 0.13 ENSMUST00000044734.3
regulating synaptic membrane exocytosis 4
chr13_-_103470937 0.13 ENSMUST00000167058.8
ENSMUST00000164111.2
microtubule associated serine/threonine kinase family member 4
chr1_+_105591595 0.13 ENSMUST00000039173.13
ENSMUST00000086721.10
ENSMUST00000190501.7
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr19_+_41471067 0.12 ENSMUST00000067795.13
ligand dependent nuclear receptor corepressor
chr7_+_135139542 0.12 ENSMUST00000073961.8
protein tyrosine phosphatase, receptor type, E
chr4_+_132738787 0.12 ENSMUST00000105915.8
ENSMUST00000105916.8
AT hook, DNA binding motif, containing 1
chr2_+_157870606 0.12 ENSMUST00000109518.8
ENSMUST00000029180.14
regulation of nuclear pre-mRNA domain containing 1B
chr2_-_30014466 0.12 ENSMUST00000044751.14
zyg-11 related, cell cycle regulator
chr11_+_57409484 0.11 ENSMUST00000108849.8
ENSMUST00000020830.14
microfibrillar-associated protein 3
chr2_+_15060051 0.11 ENSMUST00000069870.11
ENSMUST00000239125.2
ENSMUST00000193836.3
ADP-ribosylation factor-like 5B
chr8_-_73302068 0.11 ENSMUST00000058534.7
mediator complex subunit 26
chrX_+_72386220 0.11 ENSMUST00000114499.8
ENSMUST00000033731.4
zinc finger protein 275
chr14_-_36770898 0.11 ENSMUST00000225070.2
ENSMUST00000022338.7
retinal G protein coupled receptor
chr1_-_150268771 0.10 ENSMUST00000097546.9
ENSMUST00000111913.9
odr4 GPCR localization factor homolog
chr9_-_50528727 0.10 ENSMUST00000131351.8
ENSMUST00000171462.8
NKAP domain containing 1
chr17_-_49871291 0.10 ENSMUST00000224595.2
ENSMUST00000057610.8
dishevelled associated activator of morphogenesis 2
chr17_-_47922374 0.10 ENSMUST00000024783.9
bystin-like
chr13_+_81031512 0.10 ENSMUST00000099356.10
arrestin domain containing 3
chr6_-_54543446 0.10 ENSMUST00000019268.11
secernin 1
chr9_+_40180726 0.09 ENSMUST00000171835.9
sodium channel, voltage-gated, type III, beta
chr12_+_3476857 0.09 ENSMUST00000111215.10
ENSMUST00000092003.12
ENSMUST00000144247.9
ENSMUST00000153102.9
ASXL transcriptional regulator 2
chr9_-_9239056 0.09 ENSMUST00000093893.12
Rho GTPase activating protein 42
chr12_-_79343040 0.09 ENSMUST00000218377.2
ENSMUST00000021547.8
zinc finger, FYVE domain containing 26
chr19_-_3625698 0.09 ENSMUST00000172362.3
ENSMUST00000025846.16
ENSMUST00000226109.2
ENSMUST00000113997.9
protein phosphatase 6, regulatory subunit 3
chr5_+_93241287 0.09 ENSMUST00000074733.11
ENSMUST00000201700.4
ENSMUST00000202196.4
ENSMUST00000202308.4
septin 11
chr6_-_57668992 0.08 ENSMUST00000053386.6
Pigy upstream reading frame
chr2_-_130480014 0.08 ENSMUST00000089561.10
ENSMUST00000110260.8
leucine zipper, putative tumor suppressor family member 3
chr17_-_84773544 0.08 ENSMUST00000047524.10
thyroid adenoma associated
chr8_+_45388466 0.08 ENSMUST00000191428.7
FAT atypical cadherin 1
chr11_+_68779372 0.08 ENSMUST00000065213.5
ring finger protein 222
chr19_+_3817396 0.08 ENSMUST00000052699.13
ENSMUST00000113974.11
ENSMUST00000113972.9
ENSMUST00000113973.8
ENSMUST00000113977.9
ENSMUST00000113968.9
lysine methyltransferase 5B
chr2_-_32277773 0.08 ENSMUST00000050785.14
lipocalin 2
chr14_-_67246282 0.08 ENSMUST00000111115.8
ENSMUST00000022634.9
BCL2/adenovirus E1B interacting protein 3-like
chr7_-_117842787 0.08 ENSMUST00000032891.15
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
chr2_-_32243246 0.07 ENSMUST00000201433.4
ENSMUST00000113352.9
ENSMUST00000201494.4
dynamin 1
chr2_+_84564394 0.07 ENSMUST00000238573.2
ENSMUST00000090729.9
yippee like 4
chr12_+_84498196 0.07 ENSMUST00000137170.3
lin-52 homolog (C. elegans)
chr15_-_84872158 0.07 ENSMUST00000165743.2
ENSMUST00000047144.13
RIKEN cDNA 5031439G07 gene
chr5_+_71857261 0.07 ENSMUST00000031122.9
gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
chr15_+_59246080 0.07 ENSMUST00000168722.3
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
chr4_-_120874376 0.07 ENSMUST00000043200.8
small ArfGAP 2
chr4_+_59805829 0.07 ENSMUST00000030080.7
sorting nexin family member 30
chr15_-_73295029 0.07 ENSMUST00000239146.2
ENSMUST00000110036.11
ENSMUST00000228180.3
PTK2 protein tyrosine kinase 2
chr12_+_86288626 0.07 ENSMUST00000221368.2
ENSMUST00000071106.6
G patch domain containing 2 like
chr5_-_22549688 0.07 ENSMUST00000062372.14
ENSMUST00000161356.8
reelin
chr4_-_70328659 0.07 ENSMUST00000144099.8
CDK5 regulatory subunit associated protein 2
chr2_-_160950936 0.06 ENSMUST00000039782.14
ENSMUST00000134178.8
chromodomain helicase DNA binding protein 6
chr3_-_103698853 0.06 ENSMUST00000118317.8
homeodomain interacting protein kinase 1
chr18_-_73836810 0.06 ENSMUST00000025393.14
SMAD family member 4
chrX_-_156381652 0.06 ENSMUST00000149249.2
ENSMUST00000058098.15
membrane-bound transcription factor peptidase, site 2
chr6_-_86646118 0.06 ENSMUST00000001184.10
MAX dimerization protein 1
chr7_+_66489500 0.06 ENSMUST00000107478.9
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr3_+_88439616 0.06 ENSMUST00000172699.2
mex3 RNA binding family member A
chr8_+_11606056 0.06 ENSMUST00000210740.2
ENSMUST00000210670.2
ENSMUST00000054399.6
ENSMUST00000209646.2
inhibitor of growth family, member 1
chr6_+_141194886 0.06 ENSMUST00000043259.10
phosphodiesterase 3A, cGMP inhibited
chr7_+_126549692 0.06 ENSMUST00000106335.8
ENSMUST00000146017.3
seizure related 6 homolog like 2
chr9_-_96993169 0.06 ENSMUST00000085206.11
solute carrier family 25, member 36
chr13_+_31990604 0.05 ENSMUST00000062292.5
forkhead box C1
chr13_+_35059285 0.05 ENSMUST00000077853.5
pre-mRNA processing factor 4B
chr1_+_166081664 0.05 ENSMUST00000111416.7
immunoglobulin-like domain containing receptor 2
chr12_-_109566764 0.05 ENSMUST00000149046.4
retrotransposon Gaglike 1
chr9_-_65734826 0.05 ENSMUST00000159109.2
zinc finger protein 609
chr2_-_79287095 0.05 ENSMUST00000041099.5
neurogenic differentiation 1
chr12_-_14202041 0.05 ENSMUST00000020926.8
LRAT domain containing 1
chr4_+_128777339 0.05 ENSMUST00000035667.9
tripartite motif-containing 62
chr4_+_65042411 0.05 ENSMUST00000084501.4
pregnancy-associated plasma protein A
chrX_-_135072979 0.04 ENSMUST00000163584.8
ENSMUST00000060101.10
transcription elongation factor A (SII)-like 8
chr19_-_4993060 0.04 ENSMUST00000133504.2
ENSMUST00000133254.2
ENSMUST00000120475.8
ENSMUST00000025834.15
pellino 3
chr8_+_88925821 0.04 ENSMUST00000066748.10
ENSMUST00000119033.8
ENSMUST00000118952.8
terminal nucleotidyltransferase 4B
chr6_-_32565127 0.04 ENSMUST00000115096.4
plexin A4
chr14_+_67470884 0.04 ENSMUST00000176161.8
early B cell factor 2
chr3_-_101017594 0.04 ENSMUST00000102694.4
prostaglandin F2 receptor negative regulator
chr17_+_36172210 0.04 ENSMUST00000074259.15
ENSMUST00000174873.2
nurim (nuclear envelope membrane protein)
chr7_+_99184645 0.04 ENSMUST00000098266.9
ENSMUST00000179755.8
arrestin, beta 1
chr1_-_88629843 0.04 ENSMUST00000159814.2
ADP-ribosylation factor-like 4C
chr18_+_67907946 0.04 ENSMUST00000025421.9
SEH1-like (S. cerevisiae
chrX_-_102865546 0.04 ENSMUST00000042664.10
solute carrier family 16 (monocarboxylic acid transporters), member 2
chr10_-_86334700 0.04 ENSMUST00000120638.8
synapsin III
chr9_-_44231526 0.04 ENSMUST00000214602.2
ENSMUST00000065080.10
C2 calcium-dependent domain containing 2-like
chr5_-_72661776 0.03 ENSMUST00000175766.8
ENSMUST00000177290.8
ENSMUST00000176974.2
ENSMUST00000167460.9
corin, serine peptidase
chr1_-_119765343 0.03 ENSMUST00000064091.12
protein tyrosine phosphatase, non-receptor type 4
chr18_-_40352372 0.03 ENSMUST00000025364.6
Yip1 domain family, member 5
chr10_-_128237087 0.03 ENSMUST00000042666.13
solute carrier family 39 (metal ion transporter), member 5
chr2_+_173501553 0.03 ENSMUST00000029024.10
ENSMUST00000109110.4
RAB22A, member RAS oncogene family

Network of associatons between targets according to the STRING database.

First level regulatory network of GCUGGUG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0060010 Sertoli cell fate commitment(GO:0060010)
0.2 0.7 GO:0036394 amylase secretion(GO:0036394)
0.1 0.8 GO:0032483 regulation of Rab protein signal transduction(GO:0032483)
0.1 0.5 GO:0010609 mRNA localization resulting in posttranscriptional regulation of gene expression(GO:0010609) positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902164)
0.1 0.4 GO:0061386 closure of optic fissure(GO:0061386)
0.1 0.4 GO:1901675 negative regulation of histone H3-K27 acetylation(GO:1901675)
0.1 0.3 GO:0061723 glycophagy(GO:0061723)
0.1 0.3 GO:0034378 chylomicron assembly(GO:0034378)
0.1 0.2 GO:0002946 tRNA C5-cytosine methylation(GO:0002946)
0.1 0.3 GO:0001992 regulation of systemic arterial blood pressure by vasopressin(GO:0001992)
0.1 0.2 GO:1904635 glomerular visceral epithelial cell apoptotic process(GO:1903210) regulation of glomerular visceral epithelial cell apoptotic process(GO:1904633) positive regulation of glomerular visceral epithelial cell apoptotic process(GO:1904635) positive regulation of progesterone biosynthetic process(GO:2000184)
0.1 0.2 GO:0015881 creatine transport(GO:0015881)
0.1 0.2 GO:0016062 adaptation of rhodopsin mediated signaling(GO:0016062) light adaption(GO:0036367)
0.1 0.2 GO:1990926 short-term synaptic potentiation(GO:1990926)
0.1 0.6 GO:0071557 histone H3-K27 demethylation(GO:0071557)
0.1 0.4 GO:0007296 vitellogenesis(GO:0007296)
0.1 0.3 GO:0031064 negative regulation of histone deacetylation(GO:0031064)
0.1 0.3 GO:0090157 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) suppression by virus of host autophagy(GO:0039521) amino acid homeostasis(GO:0080144) negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis(GO:0090157)
0.1 0.3 GO:1990928 response to amino acid starvation(GO:1990928)
0.1 0.4 GO:0021633 optic nerve structural organization(GO:0021633)
0.1 0.4 GO:2000049 positive regulation of cell-cell adhesion mediated by cadherin(GO:2000049)
0.1 0.5 GO:0021995 anterior neuropore closure(GO:0021506) neuropore closure(GO:0021995)
0.1 0.2 GO:0019858 cytosine metabolic process(GO:0019858)
0.0 0.5 GO:0032485 regulation of Ral protein signal transduction(GO:0032485)
0.0 0.1 GO:0098928 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.3 GO:1902748 positive regulation of lens fiber cell differentiation(GO:1902748)
0.0 0.3 GO:0014870 response to inactivity(GO:0014854) response to muscle inactivity(GO:0014870) response to muscle inactivity involved in regulation of muscle adaptation(GO:0014877) response to denervation involved in regulation of muscle adaptation(GO:0014894)
0.0 0.3 GO:0090245 axis elongation involved in somitogenesis(GO:0090245)
0.0 0.2 GO:0032911 negative regulation of transforming growth factor beta1 production(GO:0032911)
0.0 0.4 GO:0033564 anterior/posterior axon guidance(GO:0033564)
0.0 0.6 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.3 GO:0015803 branched-chain amino acid transport(GO:0015803) leucine transport(GO:0015820)
0.0 0.2 GO:1903347 negative regulation of bicellular tight junction assembly(GO:1903347)
0.0 0.1 GO:0015910 peroxisomal long-chain fatty acid import(GO:0015910)
0.0 0.6 GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0000083)
0.0 0.1 GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway(GO:0007185)
0.0 0.1 GO:0003220 left ventricular cardiac muscle tissue morphogenesis(GO:0003220)
0.0 0.3 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.6 GO:0021707 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.0 0.3 GO:0045048 protein insertion into ER membrane(GO:0045048)
0.0 0.2 GO:0071224 cellular response to peptidoglycan(GO:0071224)
0.0 1.0 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.1 GO:0015891 iron chelate transport(GO:0015688) siderophore transport(GO:0015891)
0.0 0.1 GO:0090327 negative regulation of locomotion involved in locomotory behavior(GO:0090327)
0.0 0.2 GO:0030950 establishment or maintenance of actin cytoskeleton polarity(GO:0030950)
0.0 0.2 GO:1990416 cellular response to brain-derived neurotrophic factor stimulus(GO:1990416)
0.0 0.3 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.1 GO:1900157 regulation of bone mineralization involved in bone maturation(GO:1900157)
0.0 0.2 GO:2000323 response to redox state(GO:0051775) negative regulation of glucocorticoid receptor signaling pathway(GO:2000323)
0.0 0.5 GO:0021859 pyramidal neuron differentiation(GO:0021859)
0.0 0.1 GO:0036500 ATF6-mediated unfolded protein response(GO:0036500)
0.0 0.4 GO:0061029 eyelid development in camera-type eye(GO:0061029)
0.0 0.1 GO:1904694 negative regulation of vascular smooth muscle contraction(GO:1904694)
0.0 0.1 GO:0007172 signal complex assembly(GO:0007172)
0.0 0.2 GO:1901250 regulation of lung goblet cell differentiation(GO:1901249) negative regulation of lung goblet cell differentiation(GO:1901250)
0.0 0.1 GO:0036091 positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress(GO:0036091)
0.0 0.1 GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185)
0.0 0.2 GO:2000766 negative regulation of cytoplasmic translation(GO:2000766)
0.0 0.2 GO:0007213 G-protein coupled acetylcholine receptor signaling pathway(GO:0007213)
0.0 0.0 GO:0061643 vagus nerve morphogenesis(GO:0021644) chemorepulsion of axon(GO:0061643)
0.0 0.2 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060213)
0.0 0.1 GO:1901491 apoptotic process involved in outflow tract morphogenesis(GO:0003275) negative regulation of lymphangiogenesis(GO:1901491) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.0 0.1 GO:0097477 lateral motor column neuron migration(GO:0097477)
0.0 0.1 GO:0035694 mitochondrial protein catabolic process(GO:0035694)
0.0 0.1 GO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion(GO:0034184)
0.0 0.1 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)
0.0 0.2 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.0 0.1 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.3 GO:0060712 spongiotrophoblast layer development(GO:0060712)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:1990843 subsarcolemmal mitochondrion(GO:1990843) interfibrillar mitochondrion(GO:1990844)
0.1 0.3 GO:0031251 PAN complex(GO:0031251)
0.1 0.7 GO:0032591 dendritic spine membrane(GO:0032591)
0.0 0.1 GO:0044317 rod spherule(GO:0044317)
0.0 0.2 GO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex(GO:0070032) synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033)
0.0 0.3 GO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex(GO:0019907)
0.0 0.4 GO:0044666 MLL3/4 complex(GO:0044666)
0.0 0.3 GO:1990316 ATG1/ULK1 kinase complex(GO:1990316)
0.0 0.2 GO:0070776 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0 0.2 GO:0005726 perichromatin fibrils(GO:0005726)
0.0 0.5 GO:0016581 NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.0 0.4 GO:0016580 Sin3 complex(GO:0016580)
0.0 0.8 GO:0030665 clathrin-coated vesicle membrane(GO:0030665)
0.0 0.2 GO:0033256 I-kappaB/NF-kappaB complex(GO:0033256)
0.0 0.1 GO:0032444 activin responsive factor complex(GO:0032444)
0.0 0.0 GO:0098592 cytoplasmic side of apical plasma membrane(GO:0098592)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.4 GO:0044224 juxtaparanode region of axon(GO:0044224)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0004458 D-lactate dehydrogenase (cytochrome) activity(GO:0004458) oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor(GO:0016898)
0.1 0.6 GO:0071558 histone demethylase activity (H3-K27 specific)(GO:0071558)
0.1 1.3 GO:0044323 phosphatidylinositol 3-kinase regulator activity(GO:0035014) retinoic acid-responsive element binding(GO:0044323)
0.1 0.5 GO:0008321 Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.1 0.2 GO:0005308 creatine transmembrane transporter activity(GO:0005308)
0.1 0.3 GO:0034647 histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.3 GO:0019778 Atg12 activating enzyme activity(GO:0019778) Atg8 activating enzyme activity(GO:0019779)
0.1 0.4 GO:0072542 protein phosphatase activator activity(GO:0072542)
0.1 0.4 GO:0005042 netrin receptor activity(GO:0005042)
0.0 0.1 GO:0004999 vasoactive intestinal polypeptide receptor activity(GO:0004999)
0.0 0.7 GO:0030346 protein phosphatase 2B binding(GO:0030346)
0.0 0.3 GO:0005000 vasopressin receptor activity(GO:0005000)
0.0 0.3 GO:0001025 RNA polymerase III transcription factor binding(GO:0001025)
0.0 0.3 GO:0017154 semaphorin receptor activity(GO:0017154)
0.0 0.2 GO:0016428 tRNA (cytosine-5-)-methyltransferase activity(GO:0016428)
0.0 0.5 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.0 0.1 GO:0031699 beta-3 adrenergic receptor binding(GO:0031699)
0.0 0.2 GO:0071532 ankyrin repeat binding(GO:0071532)
0.0 0.2 GO:0008429 phosphatidylethanolamine binding(GO:0008429)
0.0 0.1 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 1.0 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.2 GO:0070579 methylcytosine dioxygenase activity(GO:0070579)
0.0 0.1 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.0 1.1 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.3 GO:0008190 eukaryotic initiation factor 4E binding(GO:0008190)
0.0 0.6 GO:0004970 ionotropic glutamate receptor activity(GO:0004970)
0.0 0.4 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.2 GO:0005172 vascular endothelial growth factor receptor binding(GO:0005172)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.0 GO:0031896 V2 vasopressin receptor binding(GO:0031896)
0.0 0.2 GO:0071253 connexin binding(GO:0071253)
0.0 0.3 GO:0005523 tropomyosin binding(GO:0005523)
0.0 0.1 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.0 0.3 GO:0070742 C2H2 zinc finger domain binding(GO:0070742)
0.0 0.1 GO:0042799 histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.0 0.3 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 0.3 GO:0005328 neurotransmitter:sodium symporter activity(GO:0005328)
0.0 0.1 GO:0031749 D2 dopamine receptor binding(GO:0031749)
0.0 0.3 GO:0042975 peroxisome proliferator activated receptor binding(GO:0042975)
0.0 0.2 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.3 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.0 0.5 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.0 0.8 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway
0.0 0.5 PID HDAC CLASSIII PATHWAY Signaling events mediated by HDAC Class III
0.0 0.2 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 0.6 PID ARF6 PATHWAY Arf6 signaling events
0.0 0.2 PID EPHA2 FWD PATHWAY EPHA2 forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.0 0.2 REACTOME ACETYLCHOLINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Acetylcholine Neurotransmitter Release Cycle
0.0 0.3 REACTOME RETROGRADE NEUROTROPHIN SIGNALLING Genes involved in Retrograde neurotrophin signalling
0.0 0.3 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.7 REACTOME TRAFFICKING OF AMPA RECEPTORS Genes involved in Trafficking of AMPA receptors
0.0 0.9 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling
0.0 0.2 REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL Genes involved in NF-kB is activated and signals survival
0.0 1.1 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway
0.0 0.3 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.5 REACTOME ADP SIGNALLING THROUGH P2RY12 Genes involved in ADP signalling through P2Y purinoceptor 12
0.0 0.4 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA