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avrg: GFI1 WT vs 36n/n vs KD

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Results for Hoxc6

Z-value: 0.40

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Transcription factors associated with Hoxc6

Gene Symbol Gene ID Gene Info
ENSMUSG00000001661.6 homeobox C6

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Hoxc6mm39_v1_chr15_+_102917977_102918011-0.494.1e-01Click!

Activity profile of Hoxc6 motif

Sorted Z-values of Hoxc6 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr3_+_151143524 0.32 ENSMUST00000046977.12
adhesion G protein-coupled receptor L4
chr19_+_32597379 0.22 ENSMUST00000236290.2
ENSMUST00000025833.7
3'-phosphoadenosine 5'-phosphosulfate synthase 2
chr10_-_128462616 0.20 ENSMUST00000026420.7
ribosomal protein S26
chr2_-_174188505 0.18 ENSMUST00000168292.2
predicted gene, 20721
chrM_+_14138 0.18 ENSMUST00000082421.1
mitochondrially encoded cytochrome b
chrM_-_14061 0.18 ENSMUST00000082419.1
mitochondrially encoded NADH dehydrogenase 6
chr3_+_151143557 0.17 ENSMUST00000196970.3
adhesion G protein-coupled receptor L4
chr14_-_64654397 0.14 ENSMUST00000210428.2
methionine sulfoxide reductase A
chrM_+_9459 0.13 ENSMUST00000082411.1
mitochondrially encoded NADH dehydrogenase 3
chr1_+_88030951 0.12 ENSMUST00000113135.6
ENSMUST00000113138.8
UDP glucuronosyltransferase 1 family, polypeptide A7C
UDP glucuronosyltransferase 1 family, polypeptide A6B
chr9_-_19088608 0.11 ENSMUST00000212127.3
olfactory receptor 839, pseudogene 1
chr15_+_91557378 0.10 ENSMUST00000060642.7
leucine-rich repeat kinase 2
chr19_+_11446716 0.10 ENSMUST00000165310.3
membrane-spanning 4-domains, subfamily A, member 6C
chr14_-_50586329 0.10 ENSMUST00000216634.2
olfactory receptor 735
chr10_-_100425067 0.08 ENSMUST00000218821.2
ENSMUST00000054471.10
RIKEN cDNA 4930430F08 gene
chr9_-_39161290 0.08 ENSMUST00000213472.2
olfactory receptor 1537
chr1_+_88062508 0.08 ENSMUST00000113134.8
ENSMUST00000140092.8
UDP glucuronosyltransferase 1 family, polypeptide A6A
chr14_-_64654592 0.08 ENSMUST00000210363.2
methionine sulfoxide reductase A
chr15_-_50752437 0.07 ENSMUST00000183997.8
ENSMUST00000183757.8
transcriptional repressor GATA binding 1
chr14_+_26722319 0.06 ENSMUST00000035433.10
homeobox gene expressed in ES cells
chr15_-_50753061 0.06 ENSMUST00000165201.9
ENSMUST00000184458.8
transcriptional repressor GATA binding 1
chr6_-_57340712 0.05 ENSMUST00000228156.2
ENSMUST00000227186.2
ENSMUST00000228294.2
ENSMUST00000228342.2
vomeronasal 1 receptor 17
chr11_-_23845207 0.05 ENSMUST00000102863.3
ENSMUST00000020513.10
poly(A) polymerase gamma
chr1_+_46464625 0.04 ENSMUST00000189749.7
dynein, axonemal, heavy chain 7C
chr7_+_73390026 0.04 ENSMUST00000107456.4
family with sequence similarity 174, member B
chr7_+_5023375 0.04 ENSMUST00000076251.7
zinc finger protein 865
chr8_-_110688716 0.03 ENSMUST00000001722.14
ENSMUST00000051430.7
MARVEL (membrane-associating) domain containing 3
chr3_+_66892979 0.03 ENSMUST00000162362.8
ENSMUST00000065074.14
ENSMUST00000065047.13
arginine/serine-rich coiled-coil 1
chr11_-_70560110 0.03 ENSMUST00000129434.2
ENSMUST00000018431.13
sperm associated antigen 7
chr5_+_24618380 0.03 ENSMUST00000049346.10
acid-sensing (proton-gated) ion channel 3
chr14_-_52616625 0.03 ENSMUST00000214980.2
olfactory receptor 1512
chrM_+_8603 0.03 ENSMUST00000082409.1
mitochondrially encoded cytochrome c oxidase III
chr2_+_88470886 0.03 ENSMUST00000217379.2
ENSMUST00000120598.3
olfactory receptor 1191, pseudogene 1
chrX_-_142716200 0.03 ENSMUST00000112851.8
ENSMUST00000112856.3
ENSMUST00000033642.10
doublecortin
chr5_-_129030367 0.03 ENSMUST00000111346.6
ENSMUST00000200470.5
RIMS binding protein 2
chr10_+_112001581 0.02 ENSMUST00000170013.2
calcyphosphine 2
chrX_-_93256291 0.02 ENSMUST00000050328.15
eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
chr5_-_23821523 0.02 ENSMUST00000088392.9
serine/arginine-rich protein specific kinase 2
chr3_-_151455514 0.02 ENSMUST00000029671.9
interferon-induced protein 44
chr6_-_30693675 0.02 ENSMUST00000169422.8
ENSMUST00000115131.8
ENSMUST00000115130.3
ENSMUST00000031810.15
centrosomal protein 41
chr17_-_35334404 0.02 ENSMUST00000172854.2
ENSMUST00000062657.5
lymphocyte antigen 6 complex, locus G5B
chr17_+_3532455 0.02 ENSMUST00000227604.2
T cell lymphoma invasion and metastasis 2
chr13_+_93440572 0.02 ENSMUST00000109493.9
homer scaffolding protein 1
chr17_+_38082190 0.02 ENSMUST00000217119.2
olfactory receptor 122
chr6_-_123830422 0.02 ENSMUST00000162046.3
vomeronasal 2, receptor 25
chr19_+_26725589 0.02 ENSMUST00000207812.2
ENSMUST00000175791.9
ENSMUST00000207118.2
ENSMUST00000209085.2
ENSMUST00000112637.10
ENSMUST00000207054.2
ENSMUST00000208589.2
ENSMUST00000176475.9
ENSMUST00000176698.9
ENSMUST00000207832.2
ENSMUST00000177252.9
ENSMUST00000208712.2
ENSMUST00000208186.2
ENSMUST00000208806.2
ENSMUST00000208027.2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr1_-_53745920 0.02 ENSMUST00000094964.7
dynein, axonemal, heavy chain 7A
chr6_+_128376844 0.02 ENSMUST00000120405.4
nuclear receptor interacting protein 2
chr8_-_84976330 0.01 ENSMUST00000019506.9
DNA segment, Chr 8, ERATO Doi 738, expressed
chr4_+_147445744 0.01 ENSMUST00000133078.8
ENSMUST00000154154.2
zinc finger protein 978
chr7_-_109330915 0.01 ENSMUST00000035372.3
achaete-scute family bHLH transcription factor 3
chr10_-_70491764 0.01 ENSMUST00000162144.2
ENSMUST00000162793.8
phytanoyl-CoA hydroxylase interacting protein-like
chr14_+_52680447 0.01 ENSMUST00000205900.3
ENSMUST00000215030.2
ENSMUST00000206100.2
ENSMUST00000206718.2
olfactory receptor 1509
chr11_+_109317046 0.01 ENSMUST00000238825.2
ENSMUST00000103061.3
archaelysin family metallopeptidase 2
chr4_-_52936281 0.01 ENSMUST00000217546.2
olfactory receptor 271, pseudogene 1
chr9_+_40092216 0.01 ENSMUST00000218134.2
ENSMUST00000216720.2
ENSMUST00000214763.2
olfactory receptor 986
chr9_-_76120939 0.01 ENSMUST00000074880.6
GDNF family receptor alpha like
chr2_+_128704867 0.01 ENSMUST00000110324.8
fibulin 7
chr4_+_33062999 0.01 ENSMUST00000108162.8
ENSMUST00000024035.9
gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
chr2_+_65451100 0.01 ENSMUST00000144254.6
ENSMUST00000028377.14
sodium channel, voltage-gated, type II, alpha
chr4_-_147726953 0.01 ENSMUST00000133006.2
ENSMUST00000037565.14
ENSMUST00000105720.8
zinc finger protein 979
chr6_-_53955647 0.01 ENSMUST00000204674.3
ENSMUST00000166545.2
ENSMUST00000203101.3
carboxypeptidase, vitellogenic-like
chr17_+_38082519 0.01 ENSMUST00000119082.2
olfactory receptor 122
chrX_-_142716085 0.01 ENSMUST00000087313.10
doublecortin
chr10_+_19588318 0.01 ENSMUST00000020185.5
interleukin 20 receptor, alpha
chr10_-_62285458 0.01 ENSMUST00000020273.16
suppressor of var1, 3-like 1 (S. cerevisiae)
chr10_-_129591354 0.01 ENSMUST00000059038.3
olfactory receptor 807
chr19_+_24853039 0.01 ENSMUST00000073080.7
predicted gene 10053
chr12_-_64521464 0.01 ENSMUST00000059833.8
fibrous sheath CABYR binding protein
chr6_-_129894613 0.01 ENSMUST00000118060.8
killer cell lectin-like receptor, subfamily A, member 5
chr10_+_5543769 0.01 ENSMUST00000051809.10
myc target 1
chr9_-_39237341 0.01 ENSMUST00000216132.2
olfactory receptor 948
chr6_+_36364990 0.01 ENSMUST00000172278.8
cholinergic receptor, muscarinic 2, cardiac
chr10_-_107555840 0.01 ENSMUST00000050702.9
protein tyrosine phosphatase, receptor type, Q
chrX_-_166907286 0.01 ENSMUST00000239138.2
FERM and PDZ domain containing 4
chr5_+_17779273 0.01 ENSMUST00000030568.14
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr2_-_89172273 0.01 ENSMUST00000215469.2
olfactory receptor 1233
chr2_-_51039112 0.01 ENSMUST00000154545.2
ENSMUST00000017288.9
Rho family GTPase 3
chr3_-_113325938 0.01 ENSMUST00000132353.2
amylase 2a1
chr10_+_23814470 0.01 ENSMUST00000079134.5
trace amine-associated receptor 2
chr7_+_108064533 0.01 ENSMUST00000217616.3
olfactory receptor 498
chr2_-_111645069 0.01 ENSMUST00000099609.2
olfactory receptor 1303
chr19_+_39499288 0.00 ENSMUST00000025968.5
cytochrome P450, family 2, subfamily c, polypeptide 39
chr11_-_94673526 0.00 ENSMUST00000100554.8
transmembrane protein 92
chrX_+_101846569 0.00 ENSMUST00000118218.8
DMRT-like family C1c1
chr2_-_85169639 0.00 ENSMUST00000111598.2
ENSMUST00000216347.2
olfactory receptor 987
chr3_-_144738526 0.00 ENSMUST00000029919.7
chloride channel accessory 1
chr9_+_19351562 0.00 ENSMUST00000217273.2
olfactory receptor 849
chr11_-_58624049 0.00 ENSMUST00000075607.5
olfactory receptor 317
chr1_+_19279178 0.00 ENSMUST00000187754.7
transcription factor AP-2 beta
chr14_-_52593865 0.00 ENSMUST00000215147.2
olfactory receptor 1513
chr9_+_65268304 0.00 ENSMUST00000147185.3
ubiquitin-associated protein 1-like
chr2_-_85193571 0.00 ENSMUST00000215511.2
olfactory receptor 988
chr7_+_107994038 0.00 ENSMUST00000210990.2
olfactory receptor 495
chr3_+_133942244 0.00 ENSMUST00000181904.3
CXXC finger 4
chr11_+_73973733 0.00 ENSMUST00000178159.2
zinc finger protein 616
chr2_-_87488801 0.00 ENSMUST00000099857.11
ENSMUST00000135875.4
olfactory receptor 1134
chr6_-_141719536 0.00 ENSMUST00000148411.2
predicted gene 5724
chr5_-_110194352 0.00 ENSMUST00000167969.2
predicted gene, 17655
chr8_-_10026292 0.00 ENSMUST00000095476.6
ligase IV, DNA, ATP-dependent
chr17_-_3746536 0.00 ENSMUST00000115800.2
NADPH oxidase 3
chr1_+_19279138 0.00 ENSMUST00000027059.11
transcription factor AP-2 beta
chr12_+_29584560 0.00 ENSMUST00000021009.10
myelin transcription factor 1-like
chr11_+_58556387 0.00 ENSMUST00000072030.4
olfactory receptor 322
chr8_-_55177510 0.00 ENSMUST00000175915.8
WD repeat domain 17
chr6_-_3494587 0.00 ENSMUST00000049985.15
HEPACAM family member 2
chr2_-_86086061 0.00 ENSMUST00000099899.3
olfactory receptor 1049
chr2_-_111923044 0.00 ENSMUST00000099598.2
olfactory receptor 1314
chr5_-_129030111 0.00 ENSMUST00000196085.5
RIMS binding protein 2
chr6_-_57827328 0.00 ENSMUST00000203310.3
ENSMUST00000203488.3
vomeronasal 1 receptor 21
chr10_-_108535970 0.00 ENSMUST00000218023.2
predicted gene 5136
chrX_+_48552803 0.00 ENSMUST00000130558.8
Rho GTPase activating protein 36
chr14_+_75479727 0.00 ENSMUST00000022576.10
carboxypeptidase B2 (plasma)
chr3_+_66893031 0.00 ENSMUST00000046542.13
ENSMUST00000162693.8
arginine/serine-rich coiled-coil 1
chr4_-_84464521 0.00 ENSMUST00000177040.2
basonuclin 2
chr2_-_86048052 0.00 ENSMUST00000099902.2
olfactory receptor 1046
chr12_-_114226570 0.00 ENSMUST00000103479.4
ENSMUST00000195619.2
immunoglobulin heavy variable 3-5
chr8_+_46111778 0.00 ENSMUST00000143820.8
sorbin and SH3 domain containing 2
chr4_-_36056726 0.00 ENSMUST00000108124.4
leucine rich repeat and Ig domain containing 2
chr2_-_89172742 0.00 ENSMUST00000216561.2
olfactory receptor 1233
chr5_-_83502966 0.00 ENSMUST00000053543.11
trans-2,3-enoyl-CoA reductase-like
chr3_+_5283606 0.00 ENSMUST00000026284.13
zinc finger homeodomain 4
chr19_+_6414587 0.00 ENSMUST00000155973.2
splicing factor 1
chr19_+_11872971 0.00 ENSMUST00000072784.4
olfactory receptor 1420
chr7_-_115459082 0.00 ENSMUST00000206123.2
SRY (sex determining region Y)-box 6
chrX_+_162945162 0.00 ENSMUST00000131543.2
angiotensin I converting enzyme (peptidyl-dipeptidase A) 2

Network of associatons between targets according to the STRING database.

First level regulatory network of Hoxc6

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0050428 purine ribonucleoside bisphosphate biosynthetic process(GO:0034036) 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process(GO:0050428)
0.0 0.1 GO:0006711 estrogen catabolic process(GO:0006711)
0.0 0.1 GO:2000469 negative regulation of peroxidase activity(GO:2000469)
0.0 0.2 GO:0033762 response to glucagon(GO:0033762)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0044753 amphisome(GO:0044753)
0.0 0.2 GO:0045275 respiratory chain complex III(GO:0045275)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0004020 adenylylsulfate kinase activity(GO:0004020) sulfate adenylyltransferase activity(GO:0004779) sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.2 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0034211 GTP-dependent protein kinase activity(GO:0034211)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.3 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules