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avrg: GFI1 WT vs 36n/n vs KD

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Results for Rorc_Nr1d1

Z-value: 0.44

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Transcription factors associated with Rorc_Nr1d1

Gene Symbol Gene ID Gene Info
ENSMUSG00000028150.15 RAR-related orphan receptor gamma
ENSMUSG00000020889.12 nuclear receptor subfamily 1, group D, member 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Nr1d1mm39_v1_chr11_-_98666159_986661830.494.1e-01Click!
Rorcmm39_v1_chr3_+_94284812_94284834-0.197.5e-01Click!

Activity profile of Rorc_Nr1d1 motif

Sorted Z-values of Rorc_Nr1d1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_120432669 0.23 ENSMUST00000027639.8
macrophage receptor with collagenous structure
chr3_-_10273628 0.23 ENSMUST00000029041.6
fatty acid binding protein 4, adipocyte
chr17_+_34124078 0.20 ENSMUST00000172817.2
small integral membrane protein 40
chr16_-_18904240 0.18 ENSMUST00000103746.3
immunoglobulin lambda variable 1
chr3_-_89671888 0.15 ENSMUST00000200558.5
ENSMUST00000029562.5
cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr17_-_46343291 0.14 ENSMUST00000071648.12
ENSMUST00000142351.9
vascular endothelial growth factor A
chr17_-_46342739 0.14 ENSMUST00000024747.14
vascular endothelial growth factor A
chr2_-_48839218 0.11 ENSMUST00000090976.10
ENSMUST00000149679.8
origin recognition complex, subunit 4
chr17_+_25105617 0.11 ENSMUST00000117890.8
ENSMUST00000168265.8
ENSMUST00000120943.8
ENSMUST00000068508.13
ENSMUST00000119829.8
splA/ryanodine receptor domain and SOCS box containing 3
chr16_+_21828223 0.11 ENSMUST00000023561.8
SUMO/sentrin specific peptidase 2
chr2_-_86180622 0.10 ENSMUST00000099894.5
ENSMUST00000213564.3
olfactory receptor 1055
chr1_+_151220222 0.10 ENSMUST00000023918.13
ENSMUST00000111887.10
ENSMUST00000097543.8
influenza virus NS1A binding protein
chr11_-_115518774 0.10 ENSMUST00000154623.2
ENSMUST00000106503.10
ENSMUST00000141614.3
solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr4_+_11558905 0.10 ENSMUST00000095145.12
ENSMUST00000108306.9
ENSMUST00000070755.13
RAD54 homolog B (S. cerevisiae)
chr7_-_79115915 0.10 ENSMUST00000073889.14
polymerase (DNA directed), gamma
chr2_+_29014106 0.09 ENSMUST00000129544.8
senataxin
chr12_-_34578842 0.09 ENSMUST00000110819.4
histone deacetylase 9
chr3_+_108291145 0.09 ENSMUST00000090561.10
ENSMUST00000102629.8
ENSMUST00000128089.2
proline/serine-rich coiled-coil 1
chr12_-_40298072 0.09 ENSMUST00000169926.8
interferon-related developmental regulator 1
chr4_+_11579648 0.09 ENSMUST00000180239.2
fibrinogen silencer binding protein
chr17_-_25105277 0.08 ENSMUST00000234583.2
ENSMUST00000234968.2
ENSMUST00000044252.7
nucleotide binding protein 2
chr17_+_43671314 0.08 ENSMUST00000226087.2
adhesion G protein-coupled receptor F5
chr4_+_115641996 0.08 ENSMUST00000177280.8
ENSMUST00000176047.8
ATP synthase mitochondrial F1 complex assembly factor 1
chr11_+_114780867 0.07 ENSMUST00000106582.9
ENSMUST00000045151.6
CD300A molecule
chr2_+_91541245 0.07 ENSMUST00000142692.2
ENSMUST00000090608.6
harbinger transposase derived 1
chr14_+_79086492 0.07 ENSMUST00000040990.7
von Willebrand factor A domain containing 8
chr6_-_124689001 0.07 ENSMUST00000203238.2
EMG1 N1-specific pseudouridine methyltransferase
chr11_-_51526697 0.06 ENSMUST00000001081.10
required for meiotic nuclear division 5 homolog B
chr5_+_145020910 0.06 ENSMUST00000124379.3
actin related protein 2/3 complex, subunit 1A
chr7_-_121620366 0.06 ENSMUST00000033160.15
golgi associated, gamma adaptin ear containing, ARF binding protein 2
chr2_-_152857239 0.06 ENSMUST00000028972.9
p53 and DNA damage regulated 1
chr12_+_3941728 0.05 ENSMUST00000172689.8
ENSMUST00000111186.8
DNA methyltransferase 3A
chr3_-_53370621 0.05 ENSMUST00000056749.14
NHL repeat containing 3
chr7_-_79115760 0.05 ENSMUST00000125562.2
polymerase (DNA directed), gamma
chr17_-_56440817 0.05 ENSMUST00000167545.3
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
chr8_-_85807281 0.05 ENSMUST00000152785.8
WD repeat domain containing 83
chr8_-_85807308 0.05 ENSMUST00000093357.12
WD repeat domain containing 83
chr11_+_96822213 0.05 ENSMUST00000107633.2
proline rich 15-like
chr2_+_153133326 0.05 ENSMUST00000028977.7
kinesin family member 3B
chr10_+_25317309 0.05 ENSMUST00000217929.2
ENSMUST00000220121.2
erythrocyte membrane protein band 4.1 like 2
chr12_-_79237722 0.05 ENSMUST00000085254.7
retinol dehydrogenase 11
chr2_+_96148418 0.05 ENSMUST00000135431.8
ENSMUST00000162807.9
leucine rich repeat containing 4C
chr2_-_48839276 0.05 ENSMUST00000028098.11
origin recognition complex, subunit 4
chr19_+_6434416 0.05 ENSMUST00000035269.15
ENSMUST00000113483.2
muscle glycogen phosphorylase
chr2_+_30331839 0.04 ENSMUST00000131476.8
protein phosphatase 2 protein activator
chr13_-_53135064 0.04 ENSMUST00000071065.8
nuclear factor, interleukin 3, regulated
chr5_+_135216090 0.04 ENSMUST00000002825.6
bromodomain adjacent to zinc finger domain, 1B
chr5_-_136275407 0.04 ENSMUST00000196245.2
SH2B adaptor protein 2
chr9_+_54771064 0.04 ENSMUST00000034843.9
iron responsive element binding protein 2
chr15_-_81756076 0.04 ENSMUST00000023117.10
PHD finger protein 5A
chr6_-_124519240 0.04 ENSMUST00000159463.8
ENSMUST00000162844.2
ENSMUST00000160505.8
ENSMUST00000162443.8
complement component 1, s subcomponent 1
chr17_+_38110779 0.04 ENSMUST00000215168.2
ENSMUST00000216478.2
olfactory receptor 124
chr11_-_110058899 0.04 ENSMUST00000044850.4
ATP-binding cassette, sub-family A (ABC1), member 9
chr11_-_115518951 0.04 ENSMUST00000155709.2
ENSMUST00000021089.11
solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr13_+_52750883 0.04 ENSMUST00000055087.7
spleen tyrosine kinase
chr6_-_29380467 0.04 ENSMUST00000080428.13
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr7_+_13132040 0.04 ENSMUST00000005791.14
calcium binding protein 5
chr11_+_4833186 0.03 ENSMUST00000139737.2
nipsnap homolog 1
chr13_+_104365432 0.03 ENSMUST00000070761.10
ENSMUST00000225557.2
centromere protein K
chr15_+_10486092 0.03 ENSMUST00000022856.15
ENSMUST00000100775.10
ENSMUST00000169519.8
RAD1 checkpoint DNA exonuclease
chr3_-_103716593 0.03 ENSMUST00000063502.13
ENSMUST00000106832.2
ENSMUST00000106834.8
ENSMUST00000029435.15
DNA cross-link repair 1B
chr11_+_40624763 0.03 ENSMUST00000127382.2
NudC domain containing 2
chr5_+_145020640 0.03 ENSMUST00000031625.15
actin related protein 2/3 complex, subunit 1A
chr15_-_66673425 0.03 ENSMUST00000168589.8
src-like adaptor
chr11_-_116089866 0.03 ENSMUST00000066587.12
acyl-Coenzyme A oxidase 1, palmitoyl
chr12_+_116011332 0.03 ENSMUST00000073551.6
ENSMUST00000183125.2
zinc finger protein 386 (Kruppel-like)
chr12_-_72455708 0.03 ENSMUST00000078505.14
reticulon 1
chr1_+_171723231 0.03 ENSMUST00000097466.3
predicted gene 10521
chr11_-_3599673 0.03 ENSMUST00000193809.2
taurine upregulated gene 1
chr7_-_119461027 0.03 ENSMUST00000137888.2
ENSMUST00000142120.2
DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chrX_-_48980360 0.03 ENSMUST00000217355.3
olfactory receptor 1322
chr1_-_167112784 0.03 ENSMUST00000053686.9
uridine-cytidine kinase 2
chr15_-_10485976 0.02 ENSMUST00000169050.8
ENSMUST00000022855.12
BRX1, biogenesis of ribosomes
chr1_-_172418058 0.02 ENSMUST00000065679.8
SLAM family member 8
chr6_-_124689094 0.02 ENSMUST00000004379.8
EMG1 N1-specific pseudouridine methyltransferase
chr1_+_75119472 0.02 ENSMUST00000189650.7
reticulophagy regulator family member 2
chr2_+_91541197 0.02 ENSMUST00000128140.2
ENSMUST00000140183.2
harbinger transposase derived 1
chr3_-_107838895 0.02 ENSMUST00000133947.9
ENSMUST00000124215.2
ENSMUST00000106688.8
ENSMUST00000106687.9
glutathione S-transferase, mu 7
chr14_-_55101505 0.02 ENSMUST00000142283.4
homeodomain leucine zipper-encoding gene
chr7_-_126807581 0.02 ENSMUST00000120705.3
TBC1 domain family, member 10b
chr19_-_43928583 0.02 ENSMUST00000212396.2
dynamin binding protein
chr17_-_52117894 0.02 ENSMUST00000176669.8
special AT-rich sequence binding protein 1
chr13_+_21679387 0.02 ENSMUST00000104942.2
cDNA sequence AK157302
chr14_-_40730180 0.02 ENSMUST00000136661.8
peroxiredoxin like 2A
chr15_+_58287305 0.02 ENSMUST00000037270.5
family with sequence similarity 91, member A1
chr6_-_30873669 0.02 ENSMUST00000048774.13
ENSMUST00000166192.7
coatomer protein complex, subunit gamma 2
chr11_-_100418688 0.02 ENSMUST00000107385.2
ATP citrate lyase
chr7_+_126895531 0.02 ENSMUST00000170971.8
integrin alpha L
chr16_-_21814289 0.02 ENSMUST00000060673.8
lipase, member H
chr11_-_116089595 0.02 ENSMUST00000072948.11
acyl-Coenzyme A oxidase 1, palmitoyl
chr7_+_28393419 0.02 ENSMUST00000108280.2
F-box protein 27
chr2_+_57887896 0.02 ENSMUST00000112616.8
ENSMUST00000166729.2
polypeptide N-acetylgalactosaminyltransferase 5
chr3_+_137573436 0.01 ENSMUST00000090178.10
DnaJ heat shock protein family (Hsp40) member B14
chr11_-_115519086 0.01 ENSMUST00000178003.8
solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr10_-_116808514 0.01 ENSMUST00000092165.5
predicted gene 10271
chr7_+_139900771 0.01 ENSMUST00000214594.2
olfactory receptor 525
chr16_-_44379226 0.01 ENSMUST00000114634.3
biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
chr11_-_119907884 0.01 ENSMUST00000132575.8
apoptosis-associated tyrosine kinase
chr14_-_51134930 0.01 ENSMUST00000227271.2
kelch-like 33
chr15_-_5137951 0.01 ENSMUST00000141020.2
caspase recruitment domain family, member 6
chr10_-_128237087 0.01 ENSMUST00000042666.13
solute carrier family 39 (metal ion transporter), member 5
chr5_+_4073343 0.01 ENSMUST00000238634.2
A kinase (PRKA) anchor protein (yotiao) 9
chr17_+_47680097 0.01 ENSMUST00000060752.13
ENSMUST00000119841.8
mitochondrial ribosomal protein S10
chr7_-_99770280 0.01 ENSMUST00000208184.2
polymerase (DNA-directed), delta 3, accessory subunit
chr8_-_3674993 0.01 ENSMUST00000142431.8
Purkinje cell protein 2 (L7)
chr12_+_71184614 0.01 ENSMUST00000045907.16
RIKEN cDNA 2700049A03 gene
chr2_-_91540864 0.01 ENSMUST00000028678.9
ENSMUST00000076803.12
autophagy related 13
chr2_+_86832276 0.01 ENSMUST00000055129.6
olfactory receptor 1102
chr9_+_65368207 0.01 ENSMUST00000034955.8
ENSMUST00000213957.2
SPG21, maspardin
chr4_-_33189390 0.01 ENSMUST00000098181.9
peptidase M20 domain containing 2
chr4_-_20778847 0.01 ENSMUST00000102998.4
Na+/K+ transporting ATPase interacting 3
chr2_-_5867734 0.01 ENSMUST00000071016.3
predicted gene 13199
chrX_+_102465616 0.01 ENSMUST00000182089.2
predicted gene, 26992
chr1_+_86631510 0.01 ENSMUST00000168237.8
ENSMUST00000065694.8
DIS3 like 3'-5' exoribonuclease 2
chr2_+_155593030 0.00 ENSMUST00000029140.12
ENSMUST00000132608.2
protein C receptor, endothelial
chr1_-_120432477 0.00 ENSMUST00000186432.3
macrophage receptor with collagenous structure
chr2_+_158344553 0.00 ENSMUST00000109484.2
adipogenin
chr19_-_47680528 0.00 ENSMUST00000026045.14
ENSMUST00000086923.6
collagen, type XVII, alpha 1
chr8_-_3675274 0.00 ENSMUST00000004749.7
Purkinje cell protein 2 (L7)
chr2_+_158344532 0.00 ENSMUST00000059889.4
adipogenin
chr15_-_97629209 0.00 ENSMUST00000100249.10
endonuclease, polyU-specific
chr14_-_51134906 0.00 ENSMUST00000170855.2
kelch-like 33
chr11_+_95603494 0.00 ENSMUST00000107717.8
zinc finger protein 652
chr15_-_5137975 0.00 ENSMUST00000118365.3
caspase recruitment domain family, member 6
chr6_+_29361408 0.00 ENSMUST00000156163.2
calumenin
chr4_-_116228921 0.00 ENSMUST00000239239.2
ENSMUST00000239177.2
microtubule associated serine/threonine kinase 2
chr1_-_180021039 0.00 ENSMUST00000160482.8
ENSMUST00000170472.8
coenzyme Q8A
chr1_+_75119809 0.00 ENSMUST00000186037.7
ENSMUST00000187901.2
reticulophagy regulator family member 2
chr7_-_141729738 0.00 ENSMUST00000190456.2
ENSMUST00000067978.6
keratin associated protein 5-2
chr3_+_90507510 0.00 ENSMUST00000001047.8
S100 calcium binding protein A3
chr7_+_126808016 0.00 ENSMUST00000206204.2
ENSMUST00000206772.2
myosin light chain, phosphorylatable, fast skeletal muscle
chr6_+_70332836 0.00 ENSMUST00000103390.3
immunoglobulin kappa variable 8-18
chr8_-_107792264 0.00 ENSMUST00000034393.7
transmembrane p24 trafficking protein 6
chr5_+_90708962 0.00 ENSMUST00000094615.8
ENSMUST00000200765.2
albumin superfamily member 1
chr7_+_126895463 0.00 ENSMUST00000106306.9
ENSMUST00000120857.8
integrin alpha L
chr7_+_126810780 0.00 ENSMUST00000032910.13
myosin light chain, phosphorylatable, fast skeletal muscle
chr18_-_39000056 0.00 ENSMUST00000236630.2
ENSMUST00000237356.2
fibroblast growth factor 1
chr5_+_88635834 0.00 ENSMUST00000199104.5
ENSMUST00000031222.9
enamelin
chr14_+_53100756 0.00 ENSMUST00000103616.5
ENSMUST00000186370.2
T cell receptor alpha variable 15D-1-DV6D-1
chr11_-_100418717 0.00 ENSMUST00000107389.8
ENSMUST00000007131.16
ATP citrate lyase
chr3_-_92493507 0.00 ENSMUST00000194965.6
sperm mitochondria-associated cysteine-rich protein

Network of associatons between targets according to the STRING database.

First level regulatory network of Rorc_Nr1d1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0038190 neuropilin signaling pathway(GO:0038189) VEGF-activated neuropilin signaling pathway(GO:0038190)
0.0 0.2 GO:0060084 synaptic transmission involved in micturition(GO:0060084)
0.0 0.2 GO:0030974 thiamine pyrophosphate transport(GO:0030974)
0.0 0.1 GO:0031554 regulation of DNA-templated transcription, termination(GO:0031554)
0.0 0.1 GO:0010534 regulation of activation of JAK2 kinase activity(GO:0010534) activation of JAK2 kinase activity(GO:0042977) negative regulation of eosinophil activation(GO:1902567) negative regulation of activation of JAK2 kinase activity(GO:1902569) negative regulation of eosinophil migration(GO:2000417)
0.0 0.1 GO:0017126 nucleologenesis(GO:0017126)
0.0 0.1 GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly(GO:0033615)
0.0 0.0 GO:0036367 adaptation of rhodopsin mediated signaling(GO:0016062) light adaption(GO:0036367)
0.0 0.0 GO:0030472 mitotic spindle organization in nucleus(GO:0030472)
0.0 0.0 GO:0090649 response to oxygen-glucose deprivation(GO:0090649) cellular response to oxygen-glucose deprivation(GO:0090650)
0.0 0.2 GO:0071285 cellular response to lithium ion(GO:0071285)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005760 gamma DNA polymerase complex(GO:0005760)
0.0 0.0 GO:0016939 kinesin II complex(GO:0016939)
0.0 0.2 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.1 GO:0036194 muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)
0.0 0.1 GO:0034657 GID complex(GO:0034657)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0043183 vascular endothelial growth factor receptor 1 binding(GO:0043183)
0.0 0.1 GO:0001160 transcription termination site sequence-specific DNA binding(GO:0001147) transcription termination site DNA binding(GO:0001160)
0.0 0.1 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 0.2 GO:0015234 thiamine transmembrane transporter activity(GO:0015234)
0.0 0.1 GO:0015616 DNA translocase activity(GO:0015616)
0.0 0.0 GO:0030350 iron-responsive element binding(GO:0030350)
0.0 0.1 GO:0061629 RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629)
0.0 0.0 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.0 0.0 GO:0008160 protein tyrosine phosphatase activator activity(GO:0008160)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.2 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.2 REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS Genes involved in Presynaptic nicotinic acetylcholine receptors