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avrg: GFI1 WT vs 36n/n vs KD

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Results for Six3_Six1_Six2

Z-value: 0.18

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Transcription factors associated with Six3_Six1_Six2

Gene Symbol Gene ID Gene Info
ENSMUSG00000038805.11 sine oculis-related homeobox 3
ENSMUSG00000051367.9 sine oculis-related homeobox 1
ENSMUSG00000024134.12 sine oculis-related homeobox 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Six2mm39_v1_chr17_-_85995680_859957030.976.2e-03Click!
Six3mm39_v1_chr17_+_85928244_859282700.932.0e-02Click!
Six1mm39_v1_chr12_-_73093953_730939530.049.5e-01Click!

Activity profile of Six3_Six1_Six2 motif

Sorted Z-values of Six3_Six1_Six2 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_-_126275529 0.20 ENSMUST00000106372.11
ENSMUST00000155419.3
ENSMUST00000106373.9
sulfotransferase family 1A, phenol-preferring, member 1
chr9_+_106099797 0.18 ENSMUST00000062241.11
toll-like receptor 9
chr7_-_104991477 0.14 ENSMUST00000213290.2
olfactory receptor 691
chr2_+_37078210 0.13 ENSMUST00000213969.2
olfactory receptor 365
chr2_-_36752671 0.13 ENSMUST00000213676.2
ENSMUST00000215137.2
olfactory receptor 351
chr11_+_49379915 0.11 ENSMUST00000214948.2
olfactory receptor 1385
chr7_+_6470100 0.10 ENSMUST00000207658.4
ENSMUST00000215302.3
olfactory receptor 1346
chr6_-_57306479 0.09 ENSMUST00000227283.2
ENSMUST00000228356.2
vomeronasal 1 receptor 16
chr2_-_88534814 0.09 ENSMUST00000216928.2
ENSMUST00000216977.2
olfactory receptor 1196
chr10_-_81463631 0.08 ENSMUST00000042923.9
sirtuin 6
chr12_-_114252202 0.08 ENSMUST00000195124.6
ENSMUST00000103481.3
immunoglobulin heavy variable 3-6
chr5_+_23992689 0.08 ENSMUST00000120869.6
ENSMUST00000030852.13
ENSMUST00000117783.8
ENSMUST00000115113.3
RAD50 interactor 1
chr3_+_145926709 0.08 ENSMUST00000039164.4
lysophosphatidic acid receptor 3
chr3_+_94305824 0.08 ENSMUST00000050975.6
leucine rich repeat and Ig domain containing 4
chr9_+_38725910 0.07 ENSMUST00000213164.2
olfactory receptor 922
chr4_+_132903646 0.06 ENSMUST00000105912.2
WASP family, member 2
chr7_+_103620359 0.06 ENSMUST00000209473.4
olfactory receptor 635
chr9_-_70411000 0.06 ENSMUST00000034739.12
ring finger 111
chr5_+_139408906 0.05 ENSMUST00000066211.5
G protein-coupled estrogen receptor 1
chr14_+_58035640 0.05 ENSMUST00000111269.2
Sin3-associated polypeptide 18
chr9_+_98305014 0.05 ENSMUST00000052068.11
retinol binding protein 1, cellular
chr15_-_76090508 0.04 ENSMUST00000073418.13
ENSMUST00000171634.8
ENSMUST00000076442.12
plectin
chr7_-_102507962 0.04 ENSMUST00000213481.2
ENSMUST00000209952.2
olfactory receptor 566
chr10_-_12744025 0.04 ENSMUST00000219660.2
utrophin
chr2_-_89408791 0.04 ENSMUST00000217402.2
olfactory receptor 1245
chr10_-_12743915 0.04 ENSMUST00000219584.2
utrophin
chr16_-_18052937 0.04 ENSMUST00000076957.7
zinc finger, DHHC domain containing 8
chr19_+_55304703 0.03 ENSMUST00000225529.2
ENSMUST00000223690.2
ENSMUST00000095950.3
vesicle transport through interaction with t-SNAREs 1A
chr5_+_21748523 0.03 ENSMUST00000035651.6
leucine rich repeat containing 17
chr17_-_53846438 0.03 ENSMUST00000056198.4
protein phosphatase 2C-like domain containing 1
chr7_+_102965522 0.03 ENSMUST00000216456.2
olfactory receptor 597
chr15_-_66985760 0.02 ENSMUST00000092640.6
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
chr17_+_35460722 0.02 ENSMUST00000068056.12
ENSMUST00000174757.8
ENSMUST00000173731.8
DEAD box helicase 39b
chr11_+_117688486 0.02 ENSMUST00000106331.2
RIKEN cDNA 6030468B19 gene
chr9_+_123921573 0.02 ENSMUST00000111442.3
ENSMUST00000171499.3
chemokine (C-C motif) receptor 5
chr6_+_123100272 0.02 ENSMUST00000041779.13
C-type lectin domain family 4, member a2
chr9_+_103879745 0.02 ENSMUST00000035167.15
ENSMUST00000194774.6
nephronophthisis 3 (adolescent)
chr1_+_139382485 0.02 ENSMUST00000200083.5
ENSMUST00000053364.12
abnormal spindle microtubule assembly
chr2_+_157870399 0.02 ENSMUST00000103123.10
regulation of nuclear pre-mRNA domain containing 1B
chr2_-_13276074 0.02 ENSMUST00000137670.3
ENSMUST00000114791.9
Ras suppressor protein 1
chr11_+_120612278 0.02 ENSMUST00000018156.12
Rac family small GTPase 3
chr8_+_72704882 0.02 ENSMUST00000131237.8
ENSMUST00000136516.9
ENSMUST00000109997.10
ENSMUST00000132848.2
zinc finger protein 961
chr8_-_87611849 0.02 ENSMUST00000034074.8
NEDD4 binding protein 1
chr2_-_13276205 0.02 ENSMUST00000191959.6
ENSMUST00000028059.9
Ras suppressor protein 1
chr17_+_41121979 0.02 ENSMUST00000024721.8
ENSMUST00000233740.2
Rhesus blood group-associated A glycoprotein
chr6_+_123100382 0.02 ENSMUST00000032248.8
C-type lectin domain family 4, member a2
chr7_+_43339842 0.02 ENSMUST00000056329.7
kallikrein related-peptidase 14
chr14_+_58035614 0.02 ENSMUST00000128764.9
Sin3-associated polypeptide 18
chr11_-_101877832 0.02 ENSMUST00000107173.9
ENSMUST00000107172.8
dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr6_-_119925387 0.02 ENSMUST00000162541.8
WNK lysine deficient protein kinase 1
chr17_+_24026892 0.02 ENSMUST00000191385.3
serine/arginine repetitive matrix 2
chr10_-_128016135 0.01 ENSMUST00000238843.2
ENSMUST00000099139.9
RNA binding motif, single stranded interacting protein 2
chr8_-_23143422 0.01 ENSMUST00000033938.7
polymerase (DNA directed), beta
chr7_-_102368277 0.01 ENSMUST00000216312.2
olfactory receptor 33
chr7_+_29931309 0.01 ENSMUST00000019882.16
ENSMUST00000149654.8
polymerase (RNA) II (DNA directed) polypeptide I
chr9_+_72866067 0.01 ENSMUST00000098567.9
ENSMUST00000034734.9
dynein axonemal assembly factor 4
chr11_-_73800125 0.01 ENSMUST00000215690.2
olfactory receptor 395
chr7_-_100504610 0.01 ENSMUST00000156855.8
RELT tumor necrosis factor receptor
chr16_-_45544960 0.01 ENSMUST00000096057.5
transgelin 3
chr9_-_39920878 0.01 ENSMUST00000216463.3
olfactory receptor 980
chr15_-_75766321 0.01 ENSMUST00000023237.8
nicotinate phosphoribosyltransferase
chr17_+_36176485 0.01 ENSMUST00000127442.8
ENSMUST00000144382.8
protein phosphatase 1, regulatory subunit 18
chr1_+_136395673 0.01 ENSMUST00000189413.7
ENSMUST00000047817.12
kinesin family member 14
chr15_+_82136598 0.01 ENSMUST00000136948.3
RIKEN cDNA 1500009C09 gene
chr11_+_120612369 0.01 ENSMUST00000142229.2
Rac family small GTPase 3
chr9_-_119170456 0.01 ENSMUST00000139870.2
myeloid differentiation primary response gene 88
chr17_-_56312555 0.00 ENSMUST00000043785.8
signal transducing adaptor family member 2
chr12_-_114451189 0.00 ENSMUST00000103493.3
immunoglobulin heavy variable 1-4
chr16_-_31094095 0.00 ENSMUST00000060188.14
protein phosphatase 1, regulatory inhibitor subunit 2
chr15_+_101152078 0.00 ENSMUST00000228985.2
nuclear receptor subfamily 4, group A, member 1
chr7_+_15484302 0.00 ENSMUST00000098802.10
ENSMUST00000173053.2
oocyte specific homeobox 5
chr6_-_69741999 0.00 ENSMUST00000103365.3
immunoglobulin kappa variable 12-46
chr18_+_89224219 0.00 ENSMUST00000236835.2
CD226 antigen
chr7_-_103393740 0.00 ENSMUST00000216300.2
olfactory receptor 629
chr7_-_48149069 0.00 ENSMUST00000098433.5
MAS-related GPR, member X2
chr14_-_75830550 0.00 ENSMUST00000164082.9
ENSMUST00000169658.9
chibby family member 2
chr8_+_70285282 0.00 ENSMUST00000131637.9
pre B cell leukemia homeobox 4
chr9_-_121668527 0.00 ENSMUST00000135986.9
coiled-coil domain containing 13
chr11_-_6180127 0.00 ENSMUST00000004505.3
NPC1 like intracellular cholesterol transporter 1
chr7_+_43837629 0.00 ENSMUST00000073713.8
kallikrein 1-related peptidase b24
chrY_-_13223928 0.00 ENSMUST00000178050.2
predicted gene, 21828
chrY_-_13349063 0.00 ENSMUST00000178519.2
predicted gene, 21725
chrY_-_18061812 0.00 ENSMUST00000179219.2
predicted gene, 21764
chr5_+_138805835 0.00 ENSMUST00000179205.2
forkhead box L3
chr16_-_58647137 0.00 ENSMUST00000215069.2
ENSMUST00000079955.6
olfactory receptor 175
chr14_+_53791444 0.00 ENSMUST00000198297.2
T cell receptor alpha variable 14-1
chr2_-_76698725 0.00 ENSMUST00000149616.8
ENSMUST00000152185.8
ENSMUST00000130915.8
ENSMUST00000155365.8
ENSMUST00000128071.8
titin
chr3_-_88332401 0.00 ENSMUST00000168755.7
ENSMUST00000193433.6
ENSMUST00000195657.6
ENSMUST00000057935.9
solute carrier family 25, member 44
chr11_-_69586347 0.00 ENSMUST00000181261.2
tumor necrosis factor (ligand) superfamily, member 12
chrY_-_40731110 0.00 ENSMUST00000177579.2
predicted gene, 21797
chr6_+_48514518 0.00 ENSMUST00000040361.8
ATPase, H+ transporting, lysosomal V0 subunit E2
chr6_+_48514578 0.00 ENSMUST00000203011.2
ATPase, H+ transporting, lysosomal V0 subunit E2
chrY_+_13941738 0.00 ENSMUST00000178689.2
predicted gene, 21767
chrY_+_18654482 0.00 ENSMUST00000179302.2
predicted gene, 21822
chr1_-_83020201 0.00 ENSMUST00000188323.2
keratin associated protein 28-10
chrY_-_13465579 0.00 ENSMUST00000178428.2
predicted gene, 21866
chr6_+_38639945 0.00 ENSMUST00000114874.5
C-type lectin domain family 2, member L

Network of associatons between targets according to the STRING database.

First level regulatory network of Six3_Six1_Six2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0032741 positive regulation of interleukin-18 production(GO:0032741)
0.0 0.1 GO:0003245 cardiac muscle tissue growth involved in heart morphogenesis(GO:0003245)
0.0 0.1 GO:0072434 signal transduction involved in G2 DNA damage checkpoint(GO:0072425) signal transduction involved in mitotic G2 DNA damage checkpoint(GO:0072434)
0.0 0.1 GO:2000722 response to mineralocorticoid(GO:0051385) regulation of cardiac vascular smooth muscle cell differentiation(GO:2000722) positive regulation of cardiac vascular smooth muscle cell differentiation(GO:2000724)
0.0 0.1 GO:0007527 adult somatic muscle development(GO:0007527)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0036019 endolysosome(GO:0036019)
0.0 0.1 GO:0070939 Dsl1p complex(GO:0070939)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0004062 aryl sulfotransferase activity(GO:0004062) 3'-phosphoadenosine 5'-phosphosulfate binding(GO:0050656)
0.0 0.2 GO:0045322 unmethylated CpG binding(GO:0045322)
0.0 0.1 GO:0046969 histone deacetylase activity (H3-K9 specific)(GO:0032129) NAD-dependent histone deacetylase activity (H3-K9 specific)(GO:0046969)
0.0 0.1 GO:0017082 mineralocorticoid receptor activity(GO:0017082)
0.0 0.1 GO:0070915 lysophosphatidic acid receptor activity(GO:0070915)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules
0.0 0.2 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling