avrg: 12D miR HR13_24
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
HR13 | 12D_BclXL |
HR14 | 12D_BclXL |
HR15 | 12D_BclXL |
HR16 | 12D_MycBclXL |
HR17 | 12D_MycBclXL |
HR18 | 12D_MycBclXL |
HR20 | 12D_p53null |
HR21 | 12D_p53null |
HR22 | 12D_Mycp53null |
HR23 | 12D_Mycp53null |
HR24 | 12D_Mycp53null |
Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
Snai1_Zeb1_Snai2 | 12.49 |
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Ahr | 11.16 |
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Max_Mycn | 10.74 |
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Ybx1_Nfya_Nfyb_Nfyc_Cebpz | 9.07 |
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Hcfc1_Six5_Smarcc2_Zfp143 | 7.35 |
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E2f2_E2f5 | 7.24 |
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Tfdp1_Wt1_Egr2 | 7.01 |
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E2f1 | 6.42 |
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Xbp1_Creb3l1 | 5.61 |
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Etv1_Etv5_Gabpa | 5.34 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.
Sample name | Condition | Replicate/Batch |
---|---|---|
12D_BclXL | ||
12D_MycBclXL | ||
12D_p53null | ||
12D_Mycp53null |