ISMARA results: GAGAACU

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avrg: 12D miR HR13_24

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Results for GAGAACU

Z-value: 0.14

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miRNA associated with seed GAGAACU

Name	miRBASE accession
mmu-miR-146a-5p miRBase	MIMAT0000158
mmu-miR-146b-5p miRBase	MIMAT0003475

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_26133734 Show fit	0.04	ENSMUST00000108308.3 ENSMUST00000075054.4	Nlgn1 Ensembl NCBI MGI UniProt Show fit	neuroligin 1
chr4_+_17853451 Show fit	0.04	ENSMUST00000029881.3	Mmp16 Ensembl NCBI MGI UniProt Show fit	matrix metallopeptidase 16
chr3_+_94413244 Show fit	0.03	ENSMUST00000166032.1 ENSMUST00000045245.5	Tdrkh Ensembl NCBI MGI UniProt Show fit	tudor and KH domain containing protein
chr5_+_105415738 Show fit	0.02	ENSMUST00000112707.1	Lrrc8b Ensembl NCBI MGI UniProt Show fit	leucine rich repeat containing 8 family, member B
chr10_+_107271827 Show fit	0.02	ENSMUST00000020057.8 ENSMUST00000105280.3	Lin7a Ensembl NCBI MGI UniProt Show fit	lin-7 homolog A (C. elegans)
chr5_-_96161990 Show fit	0.02	ENSMUST00000155901.1	Cnot6l Ensembl NCBI MGI UniProt Show fit	CCR4-NOT transcription complex, subunit 6-like
chr7_+_113765998 Show fit	0.02	ENSMUST00000046687.9	Spon1 Ensembl NCBI MGI UniProt Show fit	spondin 1, (f-spondin) extracellular matrix protein
chr1_+_40515362 Show fit	0.02	ENSMUST00000027237.5	Il18rap Ensembl NCBI MGI UniProt Show fit	interleukin 18 receptor accessory protein
chr2_+_163547148 Show fit	0.02	ENSMUST00000109411.1 ENSMUST00000018094.6	Hnf4a Ensembl NCBI MGI UniProt Show fit	hepatic nuclear factor 4, alpha
chr14_+_69029289 Show fit	0.02	ENSMUST00000014957.8	Stc1 Ensembl NCBI MGI UniProt Show fit	stanniocalcin 1

Showing 1 to 10 of 63 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0099543	positive regulation of circadian sleep/wake cycle, wakefulness(GO:0010841) retrograde trans-synaptic signaling(GO:0098917) trans-synaptic signaling by soluble gas(GO:0099543)

Showing 1 to 1 of 1 entries