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DANIO-CODE

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Results for SPDEF

Z-value: 0.71

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Transcription factors associated with SPDEF

Gene Symbol Gene ID Gene Info
ENSDARG00000029930 SAM pointed domain containing ETS transcription factor

Activity profile of SPDEF motif

Sorted Z-values of SPDEF motif

Network of associatons between targets according to the STRING database.

First level regulatory network of SPDEF

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr18_-_22745677 1.61 ENSDART00000023721
nudix hydrolase 21
chr1_+_45907269 1.38 ENSDART00000132861
calcium binding protein 39-like
chr17_-_7575628 1.29 ENSDART00000064657
syntaxin 11a
chr15_+_38397772 1.27 ENSDART00000142403
si:dkey-24p1.6
chr20_-_39783396 1.16 ENSDART00000132138
ENSDART00000139252
ENSDARG00000094075
chr5_-_34856057 1.02 ENSDART00000051312
tetratricopeptide repeat domain 33
chr4_+_12293403 0.99 ENSDART00000061070
makorin, ring finger protein, 1
chr7_-_27787236 0.97 ENSDART00000173842
si:ch211-235p24.2
chr8_-_14042703 0.89 ENSDART00000042867
death effector domain containing
chr2_+_32863386 0.83 ENSDART00000056649
transmembrane protein 53
chr5_-_26195227 0.81 ENSDART00000146124
si:ch211-102c2.7
chr25_-_24150388 0.80 ENSDART00000073527
SPT2 chromatin protein domain containing 1
chr7_+_28906162 0.79 ENSDART00000008096
APH1B gamma secretase subunit
chr2_+_52225622 0.79 ENSDART00000170353
ENSDARG00000103108
chr23_-_33848571 0.76 ENSDART00000027959
Rac GTPase activating protein 1
chr18_-_22745979 0.76 ENSDART00000023721
nudix hydrolase 21
chr17_-_7194149 0.74 ENSDART00000098731
syntaxin binding protein 5b (tomosyn)
chr19_+_9536231 0.73 ENSDART00000139385
si:ch211-288g17.3
chr13_-_42548129 0.72 ENSDART00000169083
leucine rich repeat (in FLII) interacting protein 2
chr14_+_28132910 0.72 ENSDART00000006489
acyl-CoA synthetase long-chain family member 4a
chr18_-_26815192 0.70 ENSDART00000008013
SEC11 homolog A, signal peptidase complex subunit
chr6_-_22060441 0.70 ENSDART00000167167
UTP6, small subunit (SSU) processome component, homolog (yeast)
chr17_+_8596825 0.70 ENSDART00000105322
erythroid differentiation regulatory factor 1
chr13_+_31415523 0.69 ENSDART00000076527
protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
chr15_+_19948916 0.69 ENSDART00000054416
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b
chr22_-_10722533 0.69 ENSDART00000081191
SAS-6 centriolar assembly protein
chr15_-_14706032 0.68 ENSDART00000164166
si:dkey-260j18.2
chr15_+_17407036 0.67 ENSDART00000018461
vacuole membrane protein 1
chr23_-_30837726 0.67 ENSDART00000075918
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr15_+_25592984 0.67 ENSDART00000123143
nuclear protein, ataxia-telangiectasia locus
chr8_+_150970 0.67

chr1_+_40894908 0.67 ENSDART00000111367
si:dkey-56e3.3
chr25_-_24150237 0.66 ENSDART00000073527
SPT2 chromatin protein domain containing 1
chr19_+_43468369 0.64 ENSDART00000165202
pumilio RNA-binding family member 1
chr20_-_49067167 0.63 ENSDART00000163071
ENSDART00000170617
5'-3' exoribonuclease 2
chr5_+_6291842 0.63 ENSDART00000148663
elaC ribonuclease Z 1
chr5_-_23092592 0.63 ENSDART00000024815
family with sequence similarity 76, member B
chr3_-_36298676 0.62 ENSDART00000157950
rogdi homolog (Drosophila)
chr8_+_48976657 0.62 ENSDART00000008058
AP2 associated kinase 1a
chr6_-_54436651 0.62 ENSDART00000154121
Sys1 golgi trafficking protein
chr8_+_30103357 0.61 ENSDART00000133717
Fanconi anemia, complementation group C
chr6_+_3174047 0.61 ENSDART00000160290
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a
chr4_-_12979951 0.61 ENSDART00000013839
transmembrane BAX inhibitor motif containing 4
chr22_-_111800 0.60 ENSDART00000163198
ENSDART00000168678
capping protein (actin filament) muscle Z-line, beta
chr18_+_29920669 0.60 ENSDART00000064080
centromere protein N
chr1_+_45907424 0.59 ENSDART00000053240
calcium binding protein 39-like
chr7_+_28905795 0.59 ENSDART00000146655
APH1B gamma secretase subunit
chr5_+_24580551 0.59 ENSDART00000134526
zgc:193538
KN149790v1_-_67669 0.57 ENSDART00000163561
ENSDARG00000099322
chr15_-_41353802 0.57 ENSDART00000085645
ENSDART00000134075
ubiquitin specific peptidase 16
chr20_+_29685379 0.57 ENSDART00000178617
ADAM metallopeptidase domain 17b
chr7_-_66470152 0.57 ENSDART00000021317
CTR9 homolog, Paf1/RNA polymerase II complex component
chr9_+_14052296 0.55 ENSDART00000124267
si:ch211-67e16.4
chr21_-_40915270 0.55 ENSDART00000008593
Yip1 domain family, member 5
KN150361v1_+_15585 0.55

chr7_+_34919736 0.54 ENSDART00000110552
zinc finger, DHHC-type containing 1
chr24_-_32607801 0.53 ENSDART00000143781
eukaryotic translation initiation factor 1B
chr22_-_36561217 0.53 ENSDART00000056188
info polymerase (RNA) II (DNA directed) polypeptide H
chr13_-_44645490 0.53 ENSDART00000099990
BTB (POZ) domain containing 9
chr13_+_31415428 0.53 ENSDART00000076527
protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
chr22_-_4787016 0.53 ENSDART00000140313
tumor necrosis factor, alpha-induced protein 8-like 1
chr20_+_27188382 0.52 ENSDART00000062094
transmembrane protein 251
chr15_+_19948869 0.52 ENSDART00000054416
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b
chr15_+_38397715 0.52 ENSDART00000142403
si:dkey-24p1.6
chr5_-_66614185 0.52 ENSDART00000147053
arginine/serine-rich coiled-coil 2
chr21_-_19791846 0.51 ENSDART00000037664
nicotinamide nucleotide transhydrogenase
chr3_-_3589775 0.51 ENSDART00000140482
ENSDARG00000079723
chr5_-_51363461 0.50 ENSDART00000051003
cyclin-dependent kinase 7
chr19_-_17926712 0.49 ENSDART00000167592
ENSDART00000162383
NFKB inhibitor interacting Ras-like 1
chr13_+_33545847 0.49 ENSDART00000023379
mitochondrial genome maintenance exonuclease 1
chr1_-_40671573 0.49 ENSDART00000074777
ENSDART00000158114
huntingtin
chr18_+_6498590 0.49 ENSDART00000162398
C2 calcium-dependent domain containing 5
chr20_-_20711298 0.48 ENSDART00000063492
protein phosphatase, Mg2+/Mn2+ dependent, 1Ab
chr22_+_29699600 0.48 ENSDART00000146280
BBSome interacting protein 1
chr1_+_54270060 0.48 ENSDART00000152528
R3H domain and coiled-coil containing 1-like
chr9_+_38832959 0.47 ENSDART00000110651
solute carrier family 12, member 8
chr5_-_66614227 0.47 ENSDART00000147053
arginine/serine-rich coiled-coil 2
chr4_-_12979905 0.47 ENSDART00000150674
transmembrane BAX inhibitor motif containing 4
chr8_+_48976994 0.47 ENSDART00000008058
AP2 associated kinase 1a
chr25_-_28920272 0.46 ENSDART00000166889
neuroplastin a
chr20_-_23354440 0.46 ENSDART00000103365
OCIA domain containing 1
chr16_+_12922320 0.46 ENSDART00000008535
U2 small nuclear RNA auxiliary factor 2a
chr13_-_33077267 0.45 ENSDART00000146138
thyroid hormone receptor interactor 11
chr11_+_24110796 0.44 ENSDART00000089747
NFS1 cysteine desulfurase
chr12_-_9430648 0.44 ENSDART00000152737
ENSDART00000091519
post-GPI attachment to proteins 3
chr23_-_30837818 0.43 ENSDART00000075918
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr14_-_5100304 0.43 ENSDART00000168074
polycomb group ring finger 1
chr2_-_42324511 0.43 ENSDART00000144707
solute carrier family 39 (zinc transporter), member 6
chr8_-_33145412 0.42 ENSDART00000133300
zinc finger and BTB domain containing 34
chr18_-_22745846 0.42 ENSDART00000023721
nudix hydrolase 21
chr20_-_44562847 0.42 ENSDART00000085442
methylmalonyl CoA mutase
chr23_-_30837755 0.42 ENSDART00000075918
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr7_+_32358523 0.42 ENSDART00000138914
si:ch73-314g15.3
chr16_-_7003373 0.42

chr5_+_51186666 0.41 ENSDART00000165276
PAP associated domain containing 4
chr5_+_51186708 0.41 ENSDART00000165276
PAP associated domain containing 4
chr19_-_35155287 0.41 ENSDART00000175621
elongator acetyltransferase complex subunit 2
chr5_-_31889551 0.41 ENSDART00000168870
G protein-coupled receptor 107
chr19_-_18199573 0.40 ENSDART00000166313
thyroid hormone receptor beta
chr20_+_39782876 0.40 ENSDART00000050729
HD domain containing 2
chr6_-_51666124 0.39

chr15_+_19948426 0.39 ENSDART00000054416
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b
chr15_+_38397897 0.39 ENSDART00000142403
si:dkey-24p1.6
chr7_-_50000060 0.39 ENSDART00000098842
hydroxysteroid (17-beta) dehydrogenase 12b
chr6_-_29169308 0.39 ENSDART00000110288
ENSDART00000008841
zinc finger and BTB domain containing 11
chr20_-_28939553 0.38 ENSDART00000044462
myc associated factor X
chr20_-_20711525 0.38 ENSDART00000063492
protein phosphatase, Mg2+/Mn2+ dependent, 1Ab
chr24_-_32110851 0.38 ENSDART00000159034
Ras suppressor protein 1
chr22_-_20925422 0.38 ENSDART00000002029
FK506 binding protein 8
chr18_-_26815111 0.38 ENSDART00000008013
SEC11 homolog A, signal peptidase complex subunit
chr1_+_11648973 0.37 ENSDART00000067086
N-acetylneuraminic acid synthase a
chr24_-_41356967 0.37 ENSDART00000121592
ENSDART00000019975
ENSDART00000166034
activin A receptor, type IIB
chr7_+_28905846 0.36 ENSDART00000146655
APH1B gamma secretase subunit
chr12_-_31609321 0.36 ENSDART00000165299
serine/arginine-rich splicing factor 2a
chr24_+_37752868 0.36 ENSDART00000158181
WD repeat domain 24
chr20_+_39441958 0.36 ENSDART00000009164
establishment of sister chromatid cohesion N-acetyltransferase 2
chr6_-_22059932 0.35 ENSDART00000162148
UTP6, small subunit (SSU) processome component, homolog (yeast)
chr16_-_17437374 0.34 ENSDART00000143056
zyxin
chr7_-_66470118 0.34 ENSDART00000021317
CTR9 homolog, Paf1/RNA polymerase II complex component
chr23_+_32053034 0.34 ENSDART00000140351
PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
chr21_-_22855247 0.34 ENSDART00000065563
coiled-coil domain containing 90B
chr13_-_46424420 0.34

chr21_-_30957555 0.33 ENSDART00000160224
post-GPI attachment to proteins 2
chr24_-_10756995 0.33 ENSDART00000145593
family with sequence similarity 49, member Bb
chr1_-_40671522 0.33 ENSDART00000074777
ENSDART00000158114
huntingtin
chr6_-_51666072 0.33

chr22_+_520271 0.32 ENSDART00000067638
mediator complex subunit 20
chr21_-_14666277 0.32 ENSDART00000114096
arrestin domain containing 1b
chr5_-_12586284 0.31 ENSDART00000051664
yippee-like 1
chr16_+_38387709 0.31 ENSDART00000135008
GA binding protein transcription factor, beta subunit 2b
chr12_-_31609517 0.31 ENSDART00000080173
serine/arginine-rich splicing factor 2a
chr13_+_31415310 0.29 ENSDART00000164590
protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
chr12_-_14172962 0.28 ENSDART00000158399
AVL9 homolog (S. cerevisiase)
chr7_+_20046811 0.28 ENSDART00000131019
acyl-CoA dehydrogenase, very long chain
chr11_+_25455772 0.28 ENSDART00000110224
MON1 secretory trafficking family member Bb
chr16_-_44910578 0.28 ENSDART00000157375
Rho GTPase activating protein 33
chr25_-_24150270 0.28 ENSDART00000073527
SPT2 chromatin protein domain containing 1
chr16_+_12922781 0.28 ENSDART00000008535
U2 small nuclear RNA auxiliary factor 2a
chr20_-_39886349 0.27 ENSDART00000098253
ring finger protein 217
chr24_-_7797313 0.27 ENSDART00000112777
si:dkey-197c15.6
chr8_+_23705243 0.26 ENSDART00000142395
makorin, ring finger protein, 4
chr10_+_36495590 0.26 ENSDART00000124060
ubiquitin specific peptidase like 1
chr24_-_10756925 0.26 ENSDART00000145593
family with sequence similarity 49, member Bb
chr7_-_66469975 0.25 ENSDART00000021317
CTR9 homolog, Paf1/RNA polymerase II complex component
chr15_+_19948680 0.25 ENSDART00000054416
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b
chr1_-_51086075 0.25 ENSDART00000045894
ribonuclease H2, subunit A
chr19_-_43468824 0.25

chr22_-_18466730 0.25 ENSDART00000105419
si:ch211-212d10.2
chr17_+_24666346 0.24 ENSDART00000146309
zinc finger protein 593
chr21_+_37760978 0.24 ENSDART00000145828
phosphoglycerate kinase 1
chr19_+_43468926 0.23

chr12_-_25006119 0.23 ENSDART00000158036
cysteine-rich PDZ-binding protein
chr23_+_39454172 0.23 ENSDART00000149819
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
chr24_-_32110808 0.22 ENSDART00000159034
Ras suppressor protein 1
chr24_-_10756953 0.22 ENSDART00000145593
family with sequence similarity 49, member Bb
chr15_+_17407258 0.22 ENSDART00000111753
vacuole membrane protein 1
chr2_+_52225552 0.22 ENSDART00000170353
ENSDARG00000103108
chr12_+_31307634 0.22 ENSDART00000153179
zinc finger, DHHC-type containing 6
chr9_-_28444798 0.21

chr18_-_18595722 0.21 ENSDART00000159274
splicing factor 3b, subunit 3
chr5_-_68712571 0.20 ENSDART00000109487
ENSDARG00000074645
chr7_+_28906011 0.20 ENSDART00000008096
APH1B gamma secretase subunit
chr14_-_23387483 0.20 ENSDART00000024604
methionyl-tRNA synthetase 2, mitochondrial
chr7_+_72030256 0.19 ENSDART00000172021
toll interacting protein
chr20_-_9793709 0.19 ENSDART00000053838
cell growth regulator with ring finger domain 1
chr8_+_48976926 0.19 ENSDART00000008058
AP2 associated kinase 1a
chr8_+_24721104 0.18 ENSDART00000126897
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
chr15_-_14706119 0.18 ENSDART00000164166
si:dkey-260j18.2
chr1_+_54270383 0.17 ENSDART00000152528
R3H domain and coiled-coil containing 1-like
chr7_-_19851755 0.17 ENSDART00000052902
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
chr3_-_36277628 0.17 ENSDART00000173545
component of oligomeric golgi complex 1
chr19_+_35155362 0.17 ENSDART00000146777
ENSDART00000103276
family with sequence similarity 206, member A
chr7_-_19851362 0.17 ENSDART00000052902
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
chr7_-_33791033 0.16 ENSDART00000052404
mitogen-activated protein kinase kinase 5
chr12_-_14173331 0.16 ENSDART00000158399
AVL9 homolog (S. cerevisiase)
chr21_+_37985488 0.16 ENSDART00000085728
Kruppel-like factor 8
chr1_-_28146457 0.15 ENSDART00000110270
ENSDART00000170797
PWP2 periodic tryptophan protein homolog (yeast)
chr2_+_2930605 0.15 ENSDART00000124882
THO complex 1
chr20_-_44562723 0.15 ENSDART00000085442
methylmalonyl CoA mutase
chr2_-_42324343 0.15 ENSDART00000098357
solute carrier family 39 (zinc transporter), member 6
chr7_-_13661739 0.15 ENSDART00000062257
solute carrier family 39 (zinc transporter), member 1
chr19_-_27422599 0.15 ENSDART00000089540
SAC1 like phosphatidylinositide phosphatase a
chr12_-_14172723 0.15 ENSDART00000077903
ENSDART00000163758
AVL9 homolog (S. cerevisiase)
chr25_+_3221887 0.15 ENSDART00000104888
solute carrier family 35, member B4
chr5_+_41463969 0.15 ENSDART00000035235
si:ch211-202a12.4
chr12_-_9430818 0.14 ENSDART00000152737
ENSDART00000091519
post-GPI attachment to proteins 3
chr21_+_37985536 0.14 ENSDART00000085728
Kruppel-like factor 8
chr15_-_29181452 0.14 ENSDART00000145748
ENSDART00000109482
ENSDART00000179123
ENSDARG00000074967
chr5_-_68712851 0.13 ENSDART00000109487
ENSDARG00000074645
chr16_+_33984153 0.13 ENSDART00000166254
GPN-loop GTPase 2
chr13_+_13875110 0.13 ENSDART00000131875
attractin
chr16_+_12922149 0.13 ENSDART00000124875
U2 small nuclear RNA auxiliary factor 2a
chr21_-_14666223 0.13 ENSDART00000114096
arrestin domain containing 1b
chr6_+_41811132 0.12 ENSDART00000038163
RAD18 E3 ubiquitin protein ligase
chr17_+_43478181 0.12 ENSDART00000055487
charged multivesicular body protein 3
chr23_-_27621359 0.12 ENSDART00000144419
La ribonucleoprotein domain family, member 4Aa
chr22_+_520319 0.12 ENSDART00000067638
mediator complex subunit 20
chr24_-_37752716 0.12 ENSDART00000066583
zgc:112496
chr23_-_30837699 0.12 ENSDART00000075918
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr21_-_30957754 0.11 ENSDART00000065503
post-GPI attachment to proteins 2

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.8 GO:0031439 pro-B cell differentiation(GO:0002328) regulation of mRNA cleavage(GO:0031437) positive regulation of mRNA cleavage(GO:0031439) regulation of pro-B cell differentiation(GO:2000973) positive regulation of pro-B cell differentiation(GO:2000975)
0.6 1.7 GO:0010847 regulation of chromatin assembly(GO:0010847)
0.3 1.9 GO:0007220 Notch receptor processing(GO:0007220)
0.3 0.8 GO:0090017 neural plate formation(GO:0021990) brain-derived neurotrophic factor receptor signaling pathway(GO:0031547) regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031548) positive regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031550) anterior neural plate formation(GO:0090017)
0.2 1.2 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.2 2.4 GO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling(GO:0043124)
0.2 0.5 GO:0043504 mitochondrial DNA repair(GO:0043504)
0.2 0.5 GO:0031340 positive regulation of vesicle fusion(GO:0031340)
0.2 0.5 GO:0097500 receptor localization to nonmotile primary cilium(GO:0097500) protein localization to ciliary membrane(GO:1903441)
0.2 0.6 GO:0042779 tRNA 3'-trailer cleavage(GO:0042779)
0.1 0.7 GO:1900744 regulation of p38MAPK cascade(GO:1900744)
0.1 0.6 GO:0045901 positive regulation of translational elongation(GO:0045901)
0.1 0.4 GO:0046552 thyroid hormone mediated signaling pathway(GO:0002154) retinal cone cell fate determination(GO:0042671) eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate determination(GO:0043703) retinal cone cell fate commitment(GO:0046551) photoreceptor cell fate commitment(GO:0046552) camera-type eye photoreceptor cell fate commitment(GO:0060220)
0.1 0.4 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 0.4 GO:0034421 post-translational protein acetylation(GO:0034421)
0.1 0.7 GO:0040016 embryonic cleavage(GO:0040016)
0.1 0.7 GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0000083)
0.1 1.1 GO:0006465 signal peptide processing(GO:0006465)
0.1 1.3 GO:0045747 positive regulation of Notch signaling pathway(GO:0045747)
0.1 0.6 GO:0006895 Golgi to endosome transport(GO:0006895)
0.1 0.2 GO:0098751 bone cell development(GO:0098751)
0.1 1.3 GO:0099500 synaptic vesicle fusion to presynaptic active zone membrane(GO:0031629) vesicle fusion to plasma membrane(GO:0099500)
0.1 0.3 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 0.5 GO:0071578 zinc II ion transmembrane import(GO:0071578)
0.1 0.4 GO:0008210 estrogen biosynthetic process(GO:0006703) estrogen metabolic process(GO:0008210)
0.1 0.9 GO:0042953 lipoprotein transport(GO:0042953) lipoprotein localization(GO:0044872)
0.1 0.5 GO:0010591 regulation of lamellipodium assembly(GO:0010591) regulation of lamellipodium organization(GO:1902743)
0.1 0.6 GO:0051382 kinetochore assembly(GO:0051382)
0.1 0.9 GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors(GO:0008625)
0.1 0.3 GO:0030575 nuclear body organization(GO:0030575) Cajal body organization(GO:0030576)
0.1 0.6 GO:0008298 intracellular mRNA localization(GO:0008298)
0.1 0.5 GO:0048512 rhythmic behavior(GO:0007622) circadian behavior(GO:0048512)
0.0 0.2 GO:0002082 regulation of oxidative phosphorylation(GO:0002082)
0.0 0.8 GO:0050870 positive regulation of homotypic cell-cell adhesion(GO:0034112) positive regulation of T cell activation(GO:0050870) positive regulation of leukocyte cell-cell adhesion(GO:1903039)
0.0 0.7 GO:0046660 female sex differentiation(GO:0046660)
0.0 0.1 GO:0061011 hepatic duct development(GO:0061011)
0.0 1.8 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107)
0.0 0.5 GO:0006884 cell volume homeostasis(GO:0006884)
0.0 0.4 GO:0036353 histone H2A-K119 monoubiquitination(GO:0036353)
0.0 0.9 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.6 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.0 0.5 GO:0070593 dendrite self-avoidance(GO:0070593)
0.0 0.6 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.2 GO:0043137 DNA replication, removal of RNA primer(GO:0043137)
0.0 0.5 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.8 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.4 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process(GO:0043154)
0.0 0.4 GO:0006509 membrane protein ectodomain proteolysis(GO:0006509)
0.0 0.8 GO:0000281 mitotic cytokinesis(GO:0000281)
0.0 0.4 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.1 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.0 0.5 GO:0050708 regulation of protein secretion(GO:0050708)
0.0 0.2 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.1 GO:0071850 positive regulation of cytokinesis(GO:0032467) mitotic cell cycle arrest(GO:0071850)
0.0 0.5 GO:0032007 negative regulation of TOR signaling(GO:0032007)
0.0 0.1 GO:0000183 chromatin silencing at rDNA(GO:0000183)
0.0 0.4 GO:0048264 determination of ventral identity(GO:0048264)
0.0 0.3 GO:0006739 NADP metabolic process(GO:0006739)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.8 GO:0042382 paraspeckles(GO:0042382)
0.3 1.9 GO:0070765 gamma-secretase complex(GO:0070765)
0.2 1.2 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 0.7 GO:0043291 RAVE complex(GO:0043291)
0.2 0.7 GO:0098536 deuterosome(GO:0098536)
0.2 1.1 GO:0005787 signal peptidase complex(GO:0005787)
0.1 0.5 GO:0070985 TFIIK complex(GO:0070985)
0.1 1.3 GO:0048787 presynaptic active zone membrane(GO:0048787)
0.1 0.6 GO:0070419 nonhomologous end joining complex(GO:0070419)
0.1 0.5 GO:0008290 F-actin capping protein complex(GO:0008290)
0.1 0.7 GO:0089701 U2AF(GO:0089701)
0.1 0.3 GO:0031251 PAN complex(GO:0031251)
0.1 0.5 GO:0034464 BBSome(GO:0034464)
0.1 0.6 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.4 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.6 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.2 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 0.6 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665) DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.2 GO:0071005 U2-type precatalytic spliceosome(GO:0071005)
0.0 0.4 GO:0071141 SMAD protein complex(GO:0071141)
0.0 0.3 GO:0015030 Cajal body(GO:0015030)
0.0 0.7 GO:0005811 lipid particle(GO:0005811)
0.0 0.2 GO:0000445 THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445)
0.0 0.2 GO:0071986 Ragulator complex(GO:0071986)
0.0 0.4 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.1 GO:0033553 rDNA heterochromatin(GO:0033553)
0.0 0.1 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.0 0.2 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.8 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.1 GO:0000815 ESCRT III complex(GO:0000815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.3 2.8 GO:0017091 AU-rich element binding(GO:0017091) mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.2 0.6 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 0.6 GO:0008118 N-acetyllactosaminide alpha-2,3-sialyltransferase activity(GO:0008118)
0.2 1.3 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.1 0.4 GO:0046857 nitrite reductase [NAD(P)H] activity(GO:0008942) oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor(GO:0046857)
0.1 0.1 GO:0034452 dynactin binding(GO:0034452)
0.1 0.4 GO:1990756 protein binding, bridging involved in substrate recognition for ubiquitination(GO:1990756)
0.1 0.5 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 2.0 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.7 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.1 2.4 GO:0030145 manganese ion binding(GO:0030145)
0.1 0.7 GO:0047676 arachidonate-CoA ligase activity(GO:0047676)
0.1 0.6 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 1.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 2.0 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.2 GO:0030620 U2 snRNA binding(GO:0030620)
0.1 0.4 GO:0032050 clathrin heavy chain binding(GO:0032050)
0.1 0.5 GO:0045159 myosin II binding(GO:0045159)
0.0 0.2 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.4 GO:0016783 sulfurtransferase activity(GO:0016783)
0.0 0.4 GO:0004303 estradiol 17-beta-dehydrogenase activity(GO:0004303)
0.0 0.3 GO:0032183 SUMO binding(GO:0032183)
0.0 0.5 GO:0015379 cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379)
0.0 0.2 GO:0043531 ADP binding(GO:0043531)
0.0 0.8 GO:0030515 snoRNA binding(GO:0030515)
0.0 1.9 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.5 GO:0098632 protein binding involved in cell-cell adhesion(GO:0098632)
0.0 0.1 GO:0039706 co-receptor binding(GO:0039706)
0.0 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.1 GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.4 GO:0042562 hormone binding(GO:0042562)
0.0 0.8 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.6 GO:0016866 intramolecular transferase activity(GO:0016866)
0.0 0.2 GO:0031267 small GTPase binding(GO:0031267)
0.0 0.1 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.0 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.5 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.7 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.2 GO:0030165 PDZ domain binding(GO:0030165)
0.0 1.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.0 GO:0071532 ankyrin repeat binding(GO:0071532)
0.0 0.1 GO:0003958 NADPH-hemoprotein reductase activity(GO:0003958)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.2 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.1 0.4 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor
0.0 0.5 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.4 ST INTERFERON GAMMA PATHWAY Interferon gamma pathway.
0.0 0.8 PID RAC1 REG PATHWAY Regulation of RAC1 activity
0.0 0.3 PID ARF6 PATHWAY Arf6 signaling events
0.0 0.4 PID ALK1 PATHWAY ALK1 signaling events
0.0 0.2 ST GA12 PATHWAY G alpha 12 Pathway
0.0 0.6 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.9 PID P73PATHWAY p73 transcription factor network
0.0 0.2 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.3 PID THROMBIN PAR1 PATHWAY PAR1-mediated thrombin signaling events
0.0 0.4 PID NFAT 3PATHWAY Role of Calcineurin-dependent NFAT signaling in lymphocytes
0.0 0.4 PID MYC PATHWAY C-MYC pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.9 REACTOME SIGNALING BY NOTCH4 Genes involved in Signaling by NOTCH4
0.2 1.8 REACTOME ENERGY DEPENDENT REGULATION OF MTOR BY LKB1 AMPK Genes involved in Energy dependent regulation of mTOR by LKB1-AMPK
0.1 2.8 REACTOME PROCESSING OF INTRONLESS PRE MRNAS Genes involved in Processing of Intronless Pre-mRNAs
0.1 1.1 REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.1 0.2 REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS Genes involved in Signal regulatory protein (SIRP) family interactions
0.1 0.8 REACTOME KINESINS Genes involved in Kinesins
0.0 0.6 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.0 0.6 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 1.1 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.0 0.6 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.6 REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION Genes involved in Mitochondrial Fatty Acid Beta-Oxidation
0.0 0.4 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP
0.0 0.4 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway
0.0 0.6 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.0 0.8 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.2 REACTOME GLYCOLYSIS Genes involved in Glycolysis
0.0 0.6 REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere