DANIO-CODE
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
cers4a
|
ENSDARG00000031387 | ceramide synthase 4a |
|
hoxb13a
|
ENSDARG00000056015 | homeobox B13a |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| cers4a | dr10_dc_chr22_+_4323147_4323229 | 0.19 | 4.8e-01 | Click! |
| hoxb13a | dr10_dc_chr3_+_23523703_23523716 | -0.09 | 7.5e-01 | Click! |
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr19_-_6274169 | 1.05 |
ENSDART00000140347
ENSDART00000092656 |
erf
|
Ets2 repressor factor |
| chr8_+_45326435 | 1.02 |
ENSDART00000134161
|
pabpc1l
|
poly(A) binding protein, cytoplasmic 1-like |
| chr5_-_23211957 | 0.88 |
ENSDART00000019992
|
gbgt1l1
|
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 |
| chr24_+_8702288 | 0.79 |
ENSDART00000114810
|
sycp2l
|
synaptonemal complex protein 2-like |
| chr10_-_14971273 | 0.74 |
ENSDART00000137430
|
smad2
|
SMAD family member 2 |
| chr10_-_14971565 | 0.57 |
ENSDART00000147653
|
smad2
|
SMAD family member 2 |
| chr12_-_34657387 | 0.57 |
ENSDART00000153418
|
bahcc1b
|
BAH domain and coiled-coil containing 1b |
| chr6_-_6101185 | 0.55 |
ENSDART00000125918
ENSDART00000126142 ENSDART00000081966 |
rtn4a
|
reticulon 4a |
| chr7_-_26226924 | 0.53 |
ENSDART00000058910
|
sox19b
|
SRY (sex determining region Y)-box 19b |
| chr19_-_6274237 | 0.53 |
ENSDART00000151405
|
erf
|
Ets2 repressor factor |
| chr19_-_6274458 | 0.52 |
ENSDART00000151405
|
erf
|
Ets2 repressor factor |
| chr6_-_6101145 | 0.50 |
ENSDART00000125918
ENSDART00000126142 ENSDART00000081966 |
rtn4a
|
reticulon 4a |
| chr23_-_14118530 | 0.48 |
ENSDART00000139406
|
g6pd
|
glucose-6-phosphate dehydrogenase |
| chr13_-_26668719 | 0.45 |
ENSDART00000139264
|
vrk2
|
vaccinia related kinase 2 |
| chr20_+_23707625 | 0.44 |
|
|
|
| chr10_+_32122404 | 0.39 |
ENSDART00000062311
ENSDART00000124166 |
si:dkey-250d21.1
|
si:dkey-250d21.1 |
| chr13_-_35766296 | 0.38 |
ENSDART00000162399
|
tacc3
|
transforming, acidic coiled-coil containing protein 3 |
| chr6_-_6101371 | 0.37 |
ENSDART00000125918
ENSDART00000126142 ENSDART00000081966 |
rtn4a
|
reticulon 4a |
| chr7_-_26226628 | 0.37 |
ENSDART00000058910
|
sox19b
|
SRY (sex determining region Y)-box 19b |
| chr3_-_42949526 | 0.36 |
ENSDART00000161127
|
axin1
|
axin 1 |
| chr10_+_32122225 | 0.35 |
ENSDART00000062311
ENSDART00000124166 |
si:dkey-250d21.1
|
si:dkey-250d21.1 |
| chr5_+_22006830 | 0.35 |
ENSDART00000080919
|
rpl36a
|
ribosomal protein L36A |
| chr9_+_32838316 | 0.35 |
ENSDART00000172033
|
rabl3
|
RAB, member of RAS oncogene family-like 3 |
| chr3_-_42949616 | 0.34 |
ENSDART00000161127
|
axin1
|
axin 1 |
| chr11_+_24076576 | 0.34 |
ENSDART00000171491
|
rem1
|
RAS (RAD and GEM)-like GTP-binding 1 |
| chr15_-_5810906 | 0.34 |
ENSDART00000142334
|
hnrnpl2
|
heterogeneous nuclear ribonucleoprotein L2 |
| chr1_-_8565788 | 0.34 |
ENSDART00000055011
|
zgc:136472
|
zgc:136472 |
| chr10_+_32122560 | 0.34 |
ENSDART00000062311
ENSDART00000124166 |
si:dkey-250d21.1
|
si:dkey-250d21.1 |
| KN149795v1_-_10712 | 0.34 |
|
|
|
| chr25_-_35094522 | 0.33 |
ENSDART00000153827
|
clpxb
|
caseinolytic mitochondrial matrix peptidase chaperone subunit b |
| chr10_-_6587281 | 0.33 |
ENSDART00000163788
ENSDART00000171833 |
chd1
|
chromodomain helicase DNA binding protein 1 |
| chr20_+_23707789 | 0.33 |
|
|
|
| chr18_+_20479090 | 0.32 |
ENSDART00000100665
ENSDART00000147867 |
ddb2
|
damage-specific DNA binding protein 2 |
| chr13_+_12651744 | 0.31 |
ENSDART00000090000
|
si:ch211-233a24.2
|
si:ch211-233a24.2 |
| chr7_+_23799153 | 0.31 |
|
|
|
| chr10_-_6587375 | 0.29 |
ENSDART00000163788
ENSDART00000171833 |
chd1
|
chromodomain helicase DNA binding protein 1 |
| chr24_+_17044956 | 0.29 |
|
|
|
| KN150703v1_-_14537 | 0.28 |
ENSDART00000170148
|
CABZ01081748.1
|
ENSDARG00000098362 |
| chr10_+_20435169 | 0.26 |
ENSDART00000160803
|
r3hcc1
|
R3H domain and coiled-coil containing 1 |
| chr23_-_24299965 | 0.26 |
ENSDART00000109134
|
plekhm2
|
pleckstrin homology domain containing, family M (with RUN domain) member 2 |
| chr19_-_2651862 | 0.26 |
ENSDART00000113829
|
cdca7b
|
cell division cycle associated 7b |
| chr3_+_48319803 | 0.24 |
ENSDART00000113531
|
mkl2b
|
MKL/myocardin-like 2b |
| chr23_+_31669909 | 0.24 |
ENSDART00000053534
|
tbpl1
|
TBP-like 1 |
| chr2_+_35613093 | 0.24 |
ENSDART00000098734
|
cacybp
|
calcyclin binding protein |
| chr9_+_2336680 | 0.23 |
ENSDART00000016417
|
atp5g3a
|
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a |
| chr24_+_37805069 | 0.23 |
|
|
|
| chr8_+_45326523 | 0.23 |
ENSDART00000145011
|
pabpc1l
|
poly(A) binding protein, cytoplasmic 1-like |
| chr12_-_36415669 | 0.22 |
|
|
|
| chr12_+_22137718 | 0.20 |
ENSDART00000131175
|
wnt3
|
wingless-type MMTV integration site family, member 3 |
| chr7_-_20593964 | 0.19 |
ENSDART00000135509
|
fis1
|
fission, mitochondrial 1 |
| chr3_+_59767380 | 0.18 |
|
|
|
| chr8_+_24721104 | 0.17 |
ENSDART00000126897
|
lamtor5
|
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 |
| chr9_-_32837850 | 0.17 |
ENSDART00000123374
|
dnajb11
|
DnaJ (Hsp40) homolog, subfamily B, member 11 |
| chr9_-_2886135 | 0.17 |
ENSDART00000140695
|
cdca7a
|
cell division cycle associated 7a |
| chr10_-_6587323 | 0.17 |
ENSDART00000163788
ENSDART00000171833 |
chd1
|
chromodomain helicase DNA binding protein 1 |
| chr8_+_50964745 | 0.17 |
ENSDART00000013870
|
ENSDARG00000007359
|
ENSDARG00000007359 |
| chr11_+_44696399 | 0.15 |
ENSDART00000158188
|
mgea5l
|
meningioma expressed antigen 5 (hyaluronidase) like |
| chr2_+_16928379 | 0.15 |
ENSDART00000160641
ENSDART00000125413 |
xrn1
|
5'-3' exoribonuclease 1 |
| chr9_+_28420902 | 0.15 |
|
|
|
| chr20_-_19611952 | 0.15 |
ENSDART00000040191
|
snx17
|
sorting nexin 17 |
| chr6_-_54049582 | 0.14 |
|
|
|
| chr20_-_27834646 | 0.13 |
ENSDART00000138139
|
zgc:153157
|
zgc:153157 |
| chr3_-_49082769 | 0.12 |
ENSDART00000131913
|
hgs
|
hepatocyte growth factor-regulated tyrosine kinase substrate |
| chr11_-_34521855 | 0.11 |
ENSDART00000039847
ENSDART00000135725 |
chchd4a
|
coiled-coil-helix-coiled-coil-helix domain containing 4a |
| chr10_-_14971401 | 0.10 |
ENSDART00000044756
ENSDART00000128579 |
smad2
|
SMAD family member 2 |
| chr13_+_17564330 | 0.09 |
ENSDART00000079778
|
ifit8
|
interferon-induced protein with tetratricopeptide repeats 8 |
| chr11_-_30364626 | 0.09 |
ENSDART00000089803
ENSDART00000046800 ENSDART00000172244 |
slc8a1a
|
solute carrier family 8 (sodium/calcium exchanger), member 1a |
| chr2_+_35612974 | 0.08 |
ENSDART00000098734
|
cacybp
|
calcyclin binding protein |
| KN149711v1_-_7827 | 0.08 |
ENSDART00000171410
|
ENSDARG00000104905
|
ENSDARG00000104905 |
| chr24_-_36349914 | 0.06 |
ENSDART00000155725
|
tmem241
|
transmembrane protein 241 |
| chr17_+_31803551 | 0.05 |
ENSDART00000159254
|
mettl10
|
methyltransferase like 10 |
| chr8_+_24720852 | 0.03 |
ENSDART00000126897
|
lamtor5
|
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 |
| chr23_-_14118662 | 0.03 |
ENSDART00000104834
|
g6pd
|
glucose-6-phosphate dehydrogenase |
| chr11_-_30364563 | 0.03 |
ENSDART00000165501
|
slc8a1a
|
solute carrier family 8 (sodium/calcium exchanger), member 1a |
| chr1_-_33700550 | 0.02 |
|
|
|
| chr10_+_39142185 | 0.02 |
|
|
|
| chr11_+_44696462 | 0.01 |
ENSDART00000158188
|
mgea5l
|
meningioma expressed antigen 5 (hyaluronidase) like |
| chr16_+_36465436 | 0.01 |
ENSDART00000158358
|
stk40
|
serine/threonine kinase 40 |
| chr16_+_36465373 | 0.00 |
ENSDART00000158358
|
stk40
|
serine/threonine kinase 40 |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.4 | GO:0060231 | mesenchymal to epithelial transition(GO:0060231) |
| 0.2 | 1.4 | GO:0060282 | positive regulation of oocyte development(GO:0060282) |
| 0.1 | 0.7 | GO:0090244 | Wnt signaling pathway involved in somitogenesis(GO:0090244) |
| 0.1 | 0.9 | GO:0030259 | lipid glycosylation(GO:0030259) |
| 0.1 | 0.3 | GO:0050746 | regulation of lipoprotein metabolic process(GO:0050746) regulation of protein lipidation(GO:1903059) |
| 0.1 | 0.3 | GO:1901842 | regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842) |
| 0.1 | 0.5 | GO:0006098 | pentose-phosphate shunt(GO:0006098) |
| 0.0 | 0.2 | GO:0043653 | mitochondrial fragmentation involved in apoptotic process(GO:0043653) |
| 0.0 | 0.1 | GO:0045041 | protein import into mitochondrial intermembrane space(GO:0045041) |
| 0.0 | 0.2 | GO:1904263 | positive regulation of TORC1 signaling(GO:1904263) |
| 0.0 | 0.3 | GO:1903729 | membrane tubulation(GO:0097320) regulation of plasma membrane organization(GO:1903729) |
| 0.0 | 0.9 | GO:0009950 | dorsal/ventral axis specification(GO:0009950) |
| 0.0 | 0.2 | GO:0021794 | thalamus development(GO:0021794) |
| 0.0 | 0.1 | GO:0098703 | calcium ion import across plasma membrane(GO:0098703) calcium ion import into cell(GO:1990035) |
| 0.0 | 0.3 | GO:0009411 | response to UV(GO:0009411) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.4 | GO:0071144 | SMAD2-SMAD3 protein complex(GO:0071144) |
| 0.1 | 0.7 | GO:0030877 | beta-catenin destruction complex(GO:0030877) |
| 0.0 | 1.3 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
| 0.0 | 0.3 | GO:0035145 | exon-exon junction complex(GO:0035145) |
| 0.0 | 0.2 | GO:0071986 | Ragulator complex(GO:0071986) |
| 0.0 | 0.2 | GO:0031231 | integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 2.1 | GO:0001130 | bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217) |
| 0.2 | 0.5 | GO:0004345 | glucose-6-phosphate dehydrogenase activity(GO:0004345) |
| 0.1 | 1.3 | GO:0008266 | poly(U) RNA binding(GO:0008266) |
| 0.1 | 0.3 | GO:0044548 | S100 protein binding(GO:0044548) |
| 0.1 | 1.4 | GO:0070411 | I-SMAD binding(GO:0070411) |
| 0.0 | 0.5 | GO:0005246 | calcium channel regulator activity(GO:0005246) |
| 0.0 | 0.3 | GO:0019894 | kinesin binding(GO:0019894) |
| 0.0 | 0.7 | GO:0008013 | beta-catenin binding(GO:0008013) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.4 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
| 0.0 | 0.7 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
| 0.0 | 0.4 | PID AURORA A PATHWAY | Aurora A signaling |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.4 | REACTOME SIGNALING BY NODAL | Genes involved in Signaling by NODAL |
| 0.0 | 0.7 | REACTOME CTNNB1 PHOSPHORYLATION CASCADE | Genes involved in Beta-catenin phosphorylation cascade |
| 0.0 | 0.3 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |