Project

DANIO-CODE

Navigation
Downloads

Results for hoxb1a

Z-value: 1.40

Motif logo

logo of

Transcription factors associated with hoxb1a

Gene Symbol Gene ID Gene Info
hoxb1a
ENSDARG00000008174 homeobox B1a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hoxb1adr10_dc_chr3_+_23638277_236383230.861.7e-05Click!

Activity profile of hoxb1a motif

Sorted Z-values of hoxb1a motif

Network of associatons between targets according to the STRING database.

First level regulatory network of hoxb1a

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:

Promoter Score Transcript Gene Gene Info
chr3_+_23638277 6.92 ENSDART00000110682
hoxb1a
homeobox B1a
chr6_+_29800606 4.58 ENSDART00000017424
ptmaa
prothymosin, alpha a
chr18_+_40364675 4.29 ENSDART00000098791
ENSDART00000049171
sema6dl
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
chr5_-_35729429 4.20

chr21_-_28883441 3.91 ENSDART00000132884
cxxc5a
CXXC finger protein 5a
chr11_+_36933891 3.51 ENSDART00000170542
ENSDARG00000100406
ENSDARG00000100406
chr1_-_37990863 3.31 ENSDART00000132402
gpm6ab
glycoprotein M6Ab
chr23_+_36079164 3.27 ENSDART00000103131
hoxc1a
homeo box C1a
chr7_+_42124857 3.27 ENSDART00000004120
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18
chr14_-_36037883 3.15 ENSDART00000173006
gpm6aa
glycoprotein M6Aa
chr18_+_24935499 3.04

chr20_-_35938683 2.99 ENSDART00000037855
tnfrsf21
tumor necrosis factor receptor superfamily, member 21
chr11_-_27455242 2.90 ENSDART00000045942
phf2
PHD finger protein 2
chr23_+_36079624 2.86 ENSDART00000103131
hoxc1a
homeo box C1a
chr3_+_15656123 2.83 ENSDART00000055834
phospho1
phosphatase, orphan 1
chr5_+_6054781 2.82 ENSDART00000060532
zgc:110796
zgc:110796
chr25_+_20118286 2.54 ENSDART00000104297
tnnt2d
troponin T2d, cardiac
chr7_+_16583234 2.52 ENSDART00000173580
nav2a
neuron navigator 2a
chr11_-_27455348 2.37 ENSDART00000045942
phf2
PHD finger protein 2
chr1_+_45503061 2.24 ENSDART00000010894
sox1b
SRY (sex determining region Y)-box 1b
chr8_-_38168395 2.18 ENSDART00000155189
pdlim2
PDZ and LIM domain 2 (mystique)
chr1_+_25378105 2.13 ENSDART00000059264
mxd4
MAX dimerization protein 4
chr1_-_20218263 2.06 ENSDART00000078271
cpe
carboxypeptidase E
chr17_+_52736192 2.01 ENSDART00000158273
ENSDART00000161414
meis2a
Meis homeobox 2a
chr16_+_46145286 2.01 ENSDART00000172232
sv2a
synaptic vesicle glycoprotein 2A
chr16_+_51317933 1.95 ENSDART00000157736
hmgn2
high mobility group nucleosomal binding domain 2
chr12_+_27444832 1.90 ENSDART00000133719
etv4
ets variant 4
chr16_+_46435014 1.88 ENSDART00000144000
rpz2
rapunzel 2
chr10_-_44509732 1.85

chr10_+_44509370 1.80

chr13_+_25722545 1.75

chr14_+_34207218 1.72 ENSDART00000135608
gabrp
gamma-aminobutyric acid (GABA) A receptor, pi
chr1_-_40536800 1.72 ENSDART00000134739
rgs12b
regulator of G protein signaling 12b
chr24_+_34227202 1.68 ENSDART00000105572
gbx1
gastrulation brain homeobox 1
chr22_+_35113233 1.58 ENSDART00000123066
srfa
serum response factor a
chr16_+_41922320 1.58

chr10_+_17494274 1.56

chr4_+_26507297 1.50 ENSDART00000160652
iqsec3a
IQ motif and Sec7 domain 3a
chr4_-_8005840 1.44 ENSDART00000036153
ccdc3a
coiled-coil domain containing 3a
chr21_+_16987306 1.44 ENSDART00000080628
arpc3
actin related protein 2/3 complex, subunit 3
chr8_+_5222065 1.43 ENSDART00000035676
bnip3la
BCL2/adenovirus E1B interacting protein 3-like a
chr12_-_25825072 1.38

chr5_+_16669696 1.37

chr5_+_35729588 1.35

chr1_-_37990935 1.25 ENSDART00000132402
gpm6ab
glycoprotein M6Ab
chr1_-_25377787 1.22

chr23_-_19053587 1.21

chr3_-_55399331 1.21 ENSDART00000162413
axin2
axin 2 (conductin, axil)
chr16_+_21121428 1.20

chr1_+_23093114 1.16

chr23_+_27830375 1.13 ENSDART00000137103
kmt2d
lysine (K)-specific methyltransferase 2D
chr17_-_19606453 1.11 ENSDART00000011432
reep3a
receptor accessory protein 3a
chr1_-_20132900 1.08 ENSDART00000054472
tll1
tolloid-like 1
chr1_-_7744605 1.06 ENSDART00000033917
syngr3b
synaptogyrin 3b
chr22_-_16971180 1.03 ENSDART00000090237
nfia
nuclear factor I/A
chr2_+_56946090 1.01

chr7_+_36627685 1.01 ENSDART00000113342
tox3
TOX high mobility group box family member 3
chr7_-_13128257 0.99 ENSDART00000164326
si:ch73-119p20.1
si:ch73-119p20.1
chr5_-_33156615 0.98 ENSDART00000159058
dab2ipb
DAB2 interacting protein b
chr2_+_56946287 0.97

chr22_-_16971035 0.97 ENSDART00000090237
nfia
nuclear factor I/A
chr21_-_28883243 0.93 ENSDART00000132884
cxxc5a
CXXC finger protein 5a
chr17_+_23102259 0.88 ENSDART00000178403
rasgrp3
RAS guanyl releasing protein 3 (calcium and DAG-regulated)
chr13_+_26943081 0.87 ENSDART00000146227
slc24a3
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr7_-_33078758 0.84 ENSDART00000008785
anp32a
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr18_+_41552295 0.78 ENSDART00000087445
tsen34
TSEN34 tRNA splicing endonuclease subunit
chr17_-_50899135 0.77

chr10_-_25629613 0.68 ENSDART00000131640
tiam1a
T-cell lymphoma invasion and metastasis 1a
chr7_+_16583304 0.66 ENSDART00000113332
nav2a
neuron navigator 2a
chr22_-_16970979 0.66 ENSDART00000090237
nfia
nuclear factor I/A
chr1_+_23093475 0.65

chr7_-_68229145 0.61

chr16_-_1479139 0.61 ENSDART00000036348
sim1a
single-minded family bHLH transcription factor 1a
chr7_+_33079046 0.59

chr19_-_42759951 0.59

chr14_+_43599635 0.57 ENSDART00000155539
CR786577.1
ENSDARG00000097875
chr14_-_26078923 0.53 ENSDART00000022236
emx3
empty spiracles homeobox 3
chr2_+_56946128 0.52

chr4_-_8005933 0.52 ENSDART00000036153
ccdc3a
coiled-coil domain containing 3a
chr7_+_29681510 0.51 ENSDART00000173737
tpma
alpha-tropomyosin
chr2_-_16548451 0.51 ENSDART00000152031
arhgef4
Rho guanine nucleotide exchange factor (GEF) 4
chr21_+_32285006 0.50

chr7_-_46510731 0.50

chr17_-_28084988 0.46 ENSDART00000149654
kdm1a
lysine (K)-specific demethylase 1a
chr16_-_31230568 0.45 ENSDART00000058829
scrt1b
scratch family zinc finger 1b
chr2_-_53797472 0.45 ENSDART00000057053
im:7138239
im:7138239
chr7_+_36627787 0.42 ENSDART00000113342
tox3
TOX high mobility group box family member 3
chr8_-_17692185 0.42

chr1_-_37991246 0.35 ENSDART00000128794
gpm6ab
glycoprotein M6Ab
chr23_+_22645604 0.32 ENSDART00000177273
CR388207.2
ENSDARG00000108862
chr14_-_25645760 0.29 ENSDART00000141916
sparc
secreted protein, acidic, cysteine-rich (osteonectin)
chr16_+_51696466 0.29

chr12_+_27444762 0.28 ENSDART00000013033
etv4
ets variant 4
chr25_+_7287952 0.27 ENSDART00000170569
syt12
synaptotagmin XII
chr2_-_53797503 0.27 ENSDART00000057053
im:7138239
im:7138239
chr7_-_68229018 0.25

chr5_+_8460247 0.25 ENSDART00000091397
tnksb
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase b
chr5_-_51631013 0.24 ENSDART00000010757
rgmb
repulsive guidance molecule family member b
chr18_-_40763343 0.23 ENSDART00000130397
akt2
v-akt murine thymoma viral oncogene homolog 2
chr2_+_1881022 0.21 ENSDART00000101038
tmie
transmembrane inner ear
chr16_+_41922407 0.17

chr17_+_23102283 0.12 ENSDART00000138069
rasgrp3
RAS guanyl releasing protein 3 (calcium and DAG-regulated)
chr1_-_686007 0.10 ENSDART00000165894
adamts1
ADAM metallopeptidase with thrombospondin type 1 motif, 1
chr1_-_20133116 0.09 ENSDART00000054472
tll1
tolloid-like 1
chr22_-_562269 0.07 ENSDART00000086434
tmcc2
transmembrane and coiled-coil domain family 2
chr11_-_23333850 0.06

chr21_-_28883200 0.04 ENSDART00000132884
cxxc5a
CXXC finger protein 5a
chr20_-_37673852 0.03

chr10_+_37238790 0.03 ENSDART00000137636
ksr1a
kinase suppressor of ras 1a
chr17_+_51675406 0.02 ENSDART00000157171
si:ch211-168d23.3
si:ch211-168d23.3
chr19_+_13502773 0.01 ENSDART00000157631
si:ch211-204a13.2
si:ch211-204a13.2
chr15_-_46439102 0.01 ENSDART00000125211
ENSDARG00000087950
ENSDARG00000087950

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.3 GO:0061188 regulation of chromatin silencing at rDNA(GO:0061187) negative regulation of chromatin silencing at rDNA(GO:0061188)
1.4 6.9 GO:0021561 facial nerve development(GO:0021561)
1.0 3.0 GO:0050864 regulation of B cell activation(GO:0050864)
0.3 4.9 GO:0051489 regulation of filopodium assembly(GO:0051489)
0.3 1.1 GO:0035124 embryonic caudal fin morphogenesis(GO:0035124)
0.2 1.7 GO:0060827 regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060827)
0.2 1.0 GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030948)
0.2 1.1 GO:0003422 growth plate cartilage morphogenesis(GO:0003422) chondrocyte intercalation involved in growth plate cartilage morphogenesis(GO:0003428)
0.2 2.8 GO:0070167 regulation of bone mineralization(GO:0030500) regulation of biomineral tissue development(GO:0070167)
0.2 0.5 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.2 0.6 GO:0035776 pronephric proximal tubule development(GO:0035776)
0.1 1.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 1.5 GO:0035108 limb morphogenesis(GO:0035108)
0.1 4.3 GO:0048843 negative regulation of axon extension involved in axon guidance(GO:0048843) negative regulation of axon guidance(GO:1902668)
0.1 0.2 GO:1904358 positive regulation of telomere maintenance via telomerase(GO:0032212) positive regulation of telomere maintenance via telomere lengthening(GO:1904358)
0.1 2.5 GO:0006937 regulation of muscle contraction(GO:0006937)
0.1 1.5 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.8 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.1 1.7 GO:1902476 chloride transmembrane transport(GO:1902476)
0.0 0.3 GO:0060291 long-term synaptic potentiation(GO:0060291)
0.0 2.2 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.0 4.9 GO:0002040 sprouting angiogenesis(GO:0002040)
0.0 1.4 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.2 GO:0060088 auditory receptor cell morphogenesis(GO:0002093) auditory receptor cell stereocilium organization(GO:0060088)
0.0 2.0 GO:0006836 neurotransmitter transport(GO:0006836)
0.0 0.5 GO:0021952 central nervous system projection neuron axonogenesis(GO:0021952)
0.0 3.4 GO:0043062 extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0 2.0 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 1.0 GO:0021549 cerebellum development(GO:0021549)
0.0 0.7 GO:0050772 positive regulation of axonogenesis(GO:0050772)
0.0 2.1 GO:0016485 protein processing(GO:0016485)
0.0 2.7 GO:0006260 DNA replication(GO:0006260)
0.0 0.3 GO:0032474 otolith morphogenesis(GO:0032474)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 8.1 GO:0044295 axonal growth cone(GO:0044295)
0.3 1.7 GO:1902711 GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711)
0.3 0.8 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 1.1 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 2.5 GO:0005861 troponin complex(GO:0005861)
0.1 5.3 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.1 1.1 GO:0044666 MLL3/4 complex(GO:0044666)
0.1 1.4 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 1.1 GO:0031594 neuromuscular junction(GO:0031594)
0.1 2.2 GO:0031941 filamentous actin(GO:0031941)
0.1 2.0 GO:0099501 synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501)
0.0 3.4 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 6.4 GO:0005615 extracellular space(GO:0005615)
0.0 3.1 GO:0005576 extracellular region(GO:0005576)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.6 GO:0034597 phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity(GO:0034597)
0.5 4.9 GO:0008327 methyl-CpG binding(GO:0008327)
0.4 5.3 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.3 1.7 GO:0004890 GABA-A receptor activity(GO:0004890)
0.3 2.5 GO:0031013 troponin C binding(GO:0030172) troponin I binding(GO:0031013)
0.2 2.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.9 GO:0008273 calcium, potassium:sodium antiporter activity(GO:0008273)
0.1 2.2 GO:0051371 muscle alpha-actinin binding(GO:0051371) alpha-actinin binding(GO:0051393)
0.1 4.3 GO:0030215 semaphorin receptor binding(GO:0030215)
0.1 0.8 GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters(GO:0016894)
0.1 1.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 4.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453)
0.0 1.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 1.4 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.2 GO:0015026 coreceptor activity(GO:0015026)
0.0 23.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.3 GO:0005518 collagen binding(GO:0005518)
0.0 3.2 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.3 GO:0001786 phosphatidylserine binding(GO:0001786)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.7 PID HNF3A PATHWAY FOXA1 transcription factor network
0.1 1.0 PID RAS PATHWAY Regulation of Ras family activation
0.1 2.1 PID ARF6 TRAFFICKING PATHWAY Arf6 trafficking events
0.0 4.5 NABA ECM REGULATORS Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.0 2.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.0 1.5 PID LKB1 PATHWAY LKB1 signaling events
0.0 1.4 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.5 PID HES HEY PATHWAY Notch-mediated HES/HEY network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.8 REACTOME SYNTHESIS OF PE Genes involved in Synthesis of PE
0.1 2.1 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.0 3.0 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 1.1 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 0.5 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.2 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling