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DANIO-CODE

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Results for sox13

Z-value: 0.82

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Transcription factors associated with sox13

Gene Symbol Gene ID Gene Info
ENSDARG00000030297 SRY-box transcription factor 13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
sox13dr10_dc_chr11_+_37501309_37501381-0.591.5e-02Click!

Activity profile of sox13 motif

Sorted Z-values of sox13 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of sox13

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr19_+_4835526 1.66

chr2_+_38019437 1.29 ENSDART00000139564
DDB1 and CUL4 associated factor 8
chr9_+_2523927 1.28 ENSDART00000166326
si:ch73-167c12.2
chr3_+_42383724 1.24

chr12_-_48759104 1.22 ENSDART00000130190
ENSDART00000105309
uroporphyrinogen III synthase
chr4_-_65423861 1.21 ENSDART00000175471
ENSDARG00000098062
chr4_-_35856278 1.16 ENSDART00000162568
zinc finger protein 1125
chr12_-_22279843 1.16 ENSDART00000153194
si:dkey-38p12.3
chr5_+_27793171 1.16

chr13_+_22973764 1.15 ENSDART00000110266
phosphoinositide-3-kinase adaptor protein 1
chr13_+_11303809 1.12 ENSDART00000169895
zinc finger and BTB domain containing 18
chr7_-_55346967 1.12 ENSDART00000135304
poly(A) binding protein, nuclear 1-like (cytoplasmic)
chr25_+_5845303 1.08 ENSDART00000163948
ENSDARG00000053246
chr14_+_15845853 1.01 ENSDART00000160973
polymerase (RNA) I polypeptide A
chr16_-_55211053 1.00 ENSDART00000156533
keratinocyte differentiation factor 1a
chr6_-_46733412 0.98 ENSDART00000103455
TAR (HIV) RNA binding protein 2
chr20_-_34126039 0.97 ENSDART00000033817
SCY1-like, kinase-like 3
chr16_-_43107682 0.96 ENSDART00000142003
nudix (nucleoside diphosphate linked moiety X)-type motif 17
chr5_+_24039736 0.92 ENSDART00000175389
ATPase, H+ transporting, lysosomal V0 subunit a2b
chr10_+_24530670 0.89

chr24_+_29902165 0.88 ENSDART00000168422
ENSDART00000100092
ENSDART00000113304
ferric-chelate reductase 1b
chr7_-_26226451 0.87 ENSDART00000058910
SRY (sex determining region Y)-box 19b
chr2_+_34984631 0.86 ENSDART00000141796
astrotactin 1
chr14_+_15845943 0.85 ENSDART00000159352
polymerase (RNA) I polypeptide A
chr12_-_22279890 0.84 ENSDART00000153194
si:dkey-38p12.3
chr17_-_7575628 0.84 ENSDART00000064657
syntaxin 11a
chr19_-_35286549 0.83 ENSDART00000016057
catenin (cadherin-associated protein), alpha-like 1
chr12_+_29121368 0.83 ENSDART00000006505
mix-type homeobox gene 2
chr15_-_34107138 0.83 ENSDART00000163841
lipolysis stimulated lipoprotein receptor
chr16_+_7463067 0.83 ENSDART00000149086
ATG5 autophagy related 5 homolog (S. cerevisiae)
chr2_-_57339717 0.82 ENSDART00000150034
protein inhibitor of activated STAT, 4b
chr11_-_6979695 0.82 ENSDART00000173242
ENSDART00000172896
ENSDART00000102493
zgc:173548
chr5_-_8712114 0.82 ENSDART00000134896
ENSDART00000147000
low-density lipoprotein receptor related-protein 13
chr10_-_21587697 0.82 ENSDART00000029122
zgc:165539
chr8_-_39788989 0.81 ENSDART00000067843
zgc:162025
chr15_+_40228037 0.79 ENSDART00000111018
neuronal guanine nucleotide exchange factor
chr11_+_25302044 0.79 ENSDART00000035602
CXXC finger protein 1b
chr1_-_29958364 0.79 ENSDART00000085454
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
chr5_-_8206288 0.78 ENSDART00000062957
poly(A) binding protein interacting protein 1
chr15_-_20189604 0.78 ENSDART00000152355
mediator complex subunit 13b
chr14_-_23813378 0.77 ENSDART00000133522
cytoplasmic polyadenylation element binding protein 4a
chr19_+_7489293 0.76 ENSDART00000081746
apolipoprotein A-I binding protein
chr11_+_1558144 0.73 ENSDART00000154583
si:dkey-40c23.2
chr19_-_24333844 0.72 ENSDART00000138279
chromatin target of PRMT1a
chr1_-_343261 0.72 ENSDART00000010092
growth arrest-specific 6
chr5_-_24039681 0.72 ENSDART00000046384
tRNA methyltransferase 2 homolog A
chr13_-_49934440 0.72 ENSDART00000034541
G patch domain containing 11
chr8_-_1833095 0.71 ENSDART00000114476
ENSDART00000091235
ENSDART00000140077
phosphatidylinositol 4-kinase, catalytic, alpha b
chr20_+_35535503 0.71 ENSDART00000153249
tudor domain containing 6
chr14_-_47210912 0.71 ENSDART00000031640
ENSDART00000132966
zgc:113425
chr15_-_34733101 0.70 ENSDART00000003674
ankyrin repeat and MYND domain containing 2a
chr3_+_32440178 0.70 ENSDART00000151025
si:ch73-248e21.1
chr2_+_37224986 0.70 ENSDART00000138952
apolipoprotein Da, duplicate 2
chr14_-_7437682 0.70 ENSDART00000172215
si:ch211-39i2.2
KN150339v1_-_39357 0.69 ENSDART00000169638
wu:fa19b12
chr1_+_25750825 0.68 ENSDART00000046376
GTPase activating protein (SH3 domain) binding protein 2
chr18_+_8959686 0.68 ENSDART00000145226
si:ch211-233h19.2
chr5_-_8712068 0.68 ENSDART00000134896
ENSDART00000147000
low-density lipoprotein receptor related-protein 13
chr3_+_32278978 0.67 ENSDART00000061426
related RAS viral (r-ras) oncogene homolog
chr17_-_6225136 0.67 ENSDART00000137389
ENSDART00000115389
taxilin beta b
chr2_+_30756519 0.67 ENSDART00000101861
transcription elongation factor A (SII), 1
chr5_+_12090143 0.66 ENSDART00000133167
si:dkey-98f17.5
chr21_+_26954898 0.66 ENSDART00000114469
FK506 binding protein 2
chr14_+_35084220 0.66 ENSDART00000171809
synaptotagmin-like 4
chr2_+_38019262 0.65 ENSDART00000178610
DDB1 and CUL4 associated factor 8
chr15_+_22458649 0.65 ENSDART00000109931
OAF homolog a (Drosophila)
chr2_+_38019379 0.65 ENSDART00000139564
DDB1 and CUL4 associated factor 8
chr22_-_25015224 0.65 ENSDART00000015512
polymerase (RNA) III (DNA directed) polypeptide F
chr7_-_24724911 0.64 ENSDART00000173791
REST corepressor 2
chr18_-_3430582 0.64 ENSDART00000169049
calpain 5a
chr3_+_32279283 0.62 ENSDART00000061426
related RAS viral (r-ras) oncogene homolog
chr3_+_56882443 0.62

chr8_-_51380691 0.61 ENSDART00000060628
charged multivesicular body protein 7
chr18_-_7488960 0.61 ENSDART00000052803
si:dkey-30c15.10
chr8_+_11287550 0.61 ENSDART00000115057
tight junction protein 2b (zona occludens 2)
chr14_+_30434751 0.61 ENSDART00000139975
atlastin 3
chr16_-_25318413 0.60 ENSDART00000058943
ENSDARG00000040280
chr10_-_21404605 0.60 ENSDART00000125167
avidin
chr16_+_45370954 0.59 ENSDART00000147343
deoxyribonuclease II, lysosomal
chr2_+_24982203 0.59 ENSDART00000088346
microtubule associated serine/threonine kinase 3a
chr23_-_17055508 0.58 ENSDART00000125472
DNA (cytosine-5-)-methyltransferase beta, duplicate b.3
chr9_-_34450885 0.58 ENSDART00000012385
malic enzyme 3, NADP(+)-dependent, mitochondrial
chr11_+_25302180 0.57 ENSDART00000035602
CXXC finger protein 1b
chr6_+_44199738 0.57 ENSDART00000075486
protein phosphatase 4, regulatory subunit 2b
chr10_+_33758581 0.57 ENSDART00000141650
beta 3-glucosyltransferase b
chr22_+_2483845 0.56 ENSDART00000170192
ENSDARG00000103886
chr22_-_6532901 0.56 ENSDART00000106100
zgc:171490
chr6_-_52677363 0.56 ENSDART00000083830
syndecan 4
chr5_+_9579430 0.56 ENSDART00000109236
ENSDARG00000075416
chr12_-_13511174 0.55 ENSDART00000133895
GH3 domain containing
chr5_-_8206388 0.55 ENSDART00000062957
poly(A) binding protein interacting protein 1
chr5_+_51979524 0.55 ENSDART00000168317
amyloid beta (A4) precursor protein-binding, family A, member 1a
chr24_+_24025923 0.55 ENSDART00000127842
si:dkey-226l10.6
chr13_-_33186642 0.54 ENSDART00000110295
transmembrane protein 234
chr4_+_48372465 0.54

chr7_-_71343686 0.54 ENSDART00000128678
methyltransferase like 4
chr11_+_8142982 0.54 ENSDART00000166379
sterile alpha motif domain containing 13
chr21_-_20908880 0.54 ENSDART00000079701
ring finger protein 180
chr18_+_24490621 0.54 ENSDART00000143108
ENSDARG00000091941
chr10_-_17593407 0.53 ENSDART00000145077
spindle and kinetochore associated complex subunit 1
chr19_-_17306473 0.53 ENSDART00000007906
stathmin 1a
chr11_-_25223594 0.53 ENSDART00000014945
host cell factor C1a
chr9_+_32838316 0.53 ENSDART00000172033
RAB, member of RAS oncogene family-like 3
chr11_-_14044356 0.52 ENSDART00000085158
transmembrane protein 259
chr17_+_16184621 0.52 ENSDART00000156832
kinesin family member 13Ba
chr18_-_24490329 0.51 ENSDART00000147961
ENSDARG00000094853
chr24_+_36429525 0.51 ENSDART00000062722
pseudouridylate synthase 3
chr3_+_39413882 0.51 ENSDART00000156848
ENSDARG00000097765
chr24_-_41275160 0.51

chr15_-_14162320 0.51 ENSDART00000156947
si:ch211-116o3.5
chr14_+_35065189 0.50 ENSDART00000171565
zinc finger and BTB domain containing 3
KN150030v1_-_22613 0.50 ENSDART00000175410
ENSDARG00000106760
chr21_-_25358498 0.50 ENSDART00000167189
protein phosphatase methylesterase 1
chr13_+_35346924 0.50 ENSDART00000011583
McKusick-Kaufman syndrome
chr14_-_30604897 0.50 ENSDART00000161540
si:zfos-80g12.1
chr14_-_15777250 0.49 ENSDART00000165656
MAX dimerization protein 3
chr25_-_21684852 0.49 ENSDART00000089616
base methyltransferase of 25S rRNA 2 homolog
chr5_-_23079460 0.49 ENSDART00000027217
CWC15 spliceosome-associated protein homolog (S. cerevisiae)
chr24_+_29902377 0.49 ENSDART00000168422
ENSDART00000100092
ENSDART00000113304
ferric-chelate reductase 1b
chr2_-_31850133 0.49 ENSDART00000109460
nucleolar protein 7
chr23_-_17055330 0.49 ENSDART00000125472
DNA (cytosine-5-)-methyltransferase beta, duplicate b.3
chr4_-_20119812 0.48 ENSDART00000100867
family with sequence similarity 3, member C
chr5_-_8206177 0.48 ENSDART00000062957
poly(A) binding protein interacting protein 1
chr2_-_32530224 0.48 ENSDART00000170674
ATP-binding cassette, sub-family F (GCN20), member 2a
chr23_-_17055376 0.48 ENSDART00000125472
DNA (cytosine-5-)-methyltransferase beta, duplicate b.3
chr21_+_11742219 0.48 ENSDART00000081661
nudix (nucleoside diphosphate linked moiety X)-type motif 2
chr2_-_31849916 0.47 ENSDART00000109460
nucleolar protein 7
chr9_-_40863087 0.47 ENSDART00000135134
BRCA1 associated RING domain 1
chr2_+_27674700 0.47 ENSDART00000087643
testis-specific kinase 2
chr3_-_36298676 0.47 ENSDART00000157950
rogdi homolog (Drosophila)
chr17_+_11921923 0.47 ENSDART00000155329
consortin, connexin sorting protein a
chr4_+_17653548 0.47 ENSDART00000026509
CWF19-like 1, cell cycle control
chr14_-_22198294 0.47 ENSDART00000137167
ENSDARG00000056830
chr2_+_38019291 0.46 ENSDART00000139564
DDB1 and CUL4 associated factor 8
chr16_+_17857553 0.46 ENSDART00000148878
thioesterase superfamily member 4
chr16_-_44179964 0.46 ENSDART00000058685
zinc finger protein, FOG family member 2a
chr1_-_21021029 0.45 ENSDART00000129066
zinc finger, CCHC domain containing 7
chr3_+_56882467 0.45

chr5_-_23291839 0.45 ENSDART00000099083
ENSDART00000099084
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4
chr4_-_43539382 0.45

chr5_-_28914505 0.45 ENSDART00000098364
euchromatic histone-lysine N-methyltransferase 1a
chr18_-_12358605 0.45 ENSDART00000114024
family with sequence similarity 107, member B
chr19_-_41820114 0.44 ENSDART00000038038
split hand/foot malformation (ectrodactyly) type 1
chr1_+_25751216 0.44 ENSDART00000046376
GTPase activating protein (SH3 domain) binding protein 2
chr13_-_44645490 0.44 ENSDART00000099990
BTB (POZ) domain containing 9
chr13_-_25590425 0.44 ENSDART00000142404
si:dkey-192p21.6
chr14_-_40941231 0.43 ENSDART00000138917
ADP-ribosylation factor-like 13A
chr14_-_20940726 0.43 ENSDART00000129743
si:ch211-175m2.5
chr12_-_20536385 0.43 ENSDART00000080888
SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
chr17_-_11312603 0.43 ENSDART00000091159
ADP-dependent glucokinase 2
chr5_+_24039974 0.43 ENSDART00000029699
ATPase, H+ transporting, lysosomal V0 subunit a2b
chr7_-_26226924 0.43 ENSDART00000058910
SRY (sex determining region Y)-box 19b
chr9_+_38672040 0.43 ENSDART00000157556
lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
chr2_-_22836607 0.43 ENSDART00000168022
general transcription factor IIB
chr1_+_25750998 0.43 ENSDART00000046376
GTPase activating protein (SH3 domain) binding protein 2
chr3_+_52290252 0.42 ENSDART00000018908
solute carrier family 27 (fatty acid transporter), member 1a
chr2_-_44330306 0.42 ENSDART00000111246
cell adhesion molecule 3
chr15_+_1018191 0.42

chr5_+_53633496 0.42 ENSDART00000166050
RAN guanine nucleotide release factor
chr3_-_26675055 0.41 ENSDART00000143710
phosphatidylinositol glycan anchor biosynthesis, class Q
chr24_-_24884787 0.41 ENSDART00000168254
nucleoporin 58
chr5_+_21673232 0.41 ENSDART00000131223
ferredoxin 1b
chr13_+_45387478 0.41 ENSDART00000019113
transmembrane protein 57b
chr5_-_8206218 0.41 ENSDART00000062957
poly(A) binding protein interacting protein 1
chr10_-_28494204 0.41 ENSDART00000131220
B-cell translocation gene 3
chr2_+_24982268 0.41 ENSDART00000088346
microtubule associated serine/threonine kinase 3a
chr7_+_32626520 0.41 ENSDART00000140800
ENSDART00000075263
ENSDART00000137956
tumor suppressing subtransferable candidate 4
chr14_+_7596207 0.40 ENSDART00000113299
zgc:110843
chr3_+_32279635 0.40 ENSDART00000141793
related RAS viral (r-ras) oncogene homolog
chr1_-_30301568 0.40 ENSDART00000132466
si:ch211-269i23.2
chr5_-_25133229 0.40 ENSDART00000051566
zgc:101016
chr9_-_12472519 0.39 ENSDART00000102434
enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
chr24_+_36451347 0.39 ENSDART00000142264
granulin b
chr19_-_17306333 0.39 ENSDART00000132662
stathmin 1a
chr13_-_31267459 0.39 ENSDART00000008287
phosphoglycerate mutase 1a
chr19_-_18199573 0.39 ENSDART00000166313
thyroid hormone receptor beta
chr23_-_1548272 0.39 ENSDART00000160184
ENSDART00000136436
epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
chr11_+_25302072 0.39 ENSDART00000035602
CXXC finger protein 1b
chr16_-_34523796 0.39 ENSDART00000136546
serine incorporator 2, like
chr14_+_47131478 0.39 ENSDART00000017785
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a
chr8_+_32380573 0.39 ENSDART00000146901
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
chr11_-_23458624 0.39 ENSDART00000124810
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
chr15_+_40227972 0.38 ENSDART00000111018
neuronal guanine nucleotide exchange factor
chr5_+_56539999 0.38 ENSDART00000167660
praja ring finger 2
chr3_+_48527525 0.38 ENSDART00000149755
tyrosine kinase 2
chr6_-_46733353 0.38 ENSDART00000103455
TAR (HIV) RNA binding protein 2
chr6_-_6138267 0.38 ENSDART00000092172
mitochondrial translational initiation factor 2
chr18_-_49291686 0.38 ENSDART00000174038
si:zfos-464b6.2
chr23_+_23305376 0.37 ENSDART00000126479
pleckstrin homology domain containing, family N member 1
chr20_+_44600015 0.37 ENSDART00000023763
WD repeat and coiled coil containing
chr14_+_29945396 0.37 ENSDART00000173090
microtubule associated tumor suppressor 1a
chr23_-_18781059 0.37 ENSDART00000144668
ENSDARG00000019503
chr14_-_32937341 0.36 ENSDART00000048130
START domain containing 14
chr14_+_11872906 0.36 ENSDART00000054626
histone deacetylase 3
chr23_+_2105366 0.36

chr8_-_22720007 0.36

chr12_-_14964222 0.36 ENSDART00000108852
protein kinase, membrane associated tyrosine/threonine 1
chr5_-_22364806 0.36 ENSDART00000057541
apolipoprotein O-like
chr10_-_14971565 0.35 ENSDART00000147653
SMAD family member 2
chr13_-_17333287 0.35 ENSDART00000145499
c13h10orf11 homolog (H. sapiens)

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:1903798 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of production of small RNA involved in gene silencing by RNA(GO:0070920) small RNA loading onto RISC(GO:0070922) regulation of production of miRNAs involved in gene silencing by miRNA(GO:1903798)
0.3 1.0 GO:0019364 pyridine nucleotide catabolic process(GO:0019364) NAD catabolic process(GO:0019677) pyridine-containing compound catabolic process(GO:0072526)
0.3 1.2 GO:0048103 neuronal stem cell division(GO:0036445) somatic stem cell division(GO:0048103)
0.3 1.0 GO:0003334 keratinocyte development(GO:0003334)
0.2 0.7 GO:0001659 medium-chain fatty acid transport(GO:0001579) temperature homeostasis(GO:0001659)
0.2 0.8 GO:0002931 response to ischemia(GO:0002931)
0.2 0.8 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.2 0.6 GO:0032978 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.2 1.8 GO:0009303 rRNA transcription(GO:0009303)
0.2 1.8 GO:0032776 DNA methylation on cytosine(GO:0032776)
0.1 0.4 GO:0097500 receptor localization to nonmotile primary cilium(GO:0097500) protein localization to ciliary membrane(GO:1903441)
0.1 0.9 GO:0007158 neuron cell-cell adhesion(GO:0007158)
0.1 0.8 GO:0030262 apoptotic DNA fragmentation(GO:0006309) cellular component disassembly involved in execution phase of apoptosis(GO:0006921) apoptotic nuclear changes(GO:0030262)
0.1 0.5 GO:1903059 regulation of lipoprotein metabolic process(GO:0050746) regulation of protein lipidation(GO:1903059)
0.1 0.7 GO:0051877 pigment granule aggregation in cell center(GO:0051877)
0.1 0.4 GO:0046552 thyroid hormone mediated signaling pathway(GO:0002154) retinal cone cell fate determination(GO:0042671) eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate determination(GO:0043703) retinal cone cell fate commitment(GO:0046551) photoreceptor cell fate commitment(GO:0046552) camera-type eye photoreceptor cell fate commitment(GO:0060220)
0.1 1.7 GO:0035090 maintenance of cell polarity(GO:0030011) maintenance of apical/basal cell polarity(GO:0035090) maintenance of epithelial cell apical/basal polarity(GO:0045199)
0.1 0.5 GO:1990481 tRNA pseudouridine synthesis(GO:0031119) mRNA pseudouridine synthesis(GO:1990481)
0.1 1.4 GO:0051452 vacuolar acidification(GO:0007035) pH reduction(GO:0045851) intracellular pH reduction(GO:0051452)
0.1 0.5 GO:0042998 positive regulation of Golgi to plasma membrane protein transport(GO:0042998) positive regulation of establishment of protein localization to plasma membrane(GO:0090004)
0.1 0.8 GO:0097065 anterior head development(GO:0097065)
0.1 0.4 GO:1903003 positive regulation of protein deubiquitination(GO:1903003)
0.1 0.3 GO:0045813 positive regulation of Wnt signaling pathway, calcium modulating pathway(GO:0045813)
0.1 0.3 GO:0050957 equilibrioception(GO:0050957)
0.1 0.4 GO:0006704 glucocorticoid biosynthetic process(GO:0006704)
0.1 0.8 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.4 GO:0003262 endocardial progenitor cell migration to the midline involved in heart field formation(GO:0003262)
0.1 0.4 GO:0061158 3'-UTR-mediated mRNA destabilization(GO:0061158)
0.1 0.6 GO:0070933 histone H4 deacetylation(GO:0070933)
0.1 0.3 GO:0070849 response to epidermal growth factor(GO:0070849) cellular response to epidermal growth factor stimulus(GO:0071364)
0.1 0.3 GO:0015864 uridine transport(GO:0015862) pyrimidine nucleoside transport(GO:0015864)
0.1 0.6 GO:0006108 malate metabolic process(GO:0006108)
0.1 1.0 GO:1904262 negative regulation of TORC1 signaling(GO:1904262)
0.1 0.6 GO:2001045 negative regulation of integrin-mediated signaling pathway(GO:2001045)
0.1 0.5 GO:0045721 negative regulation of gluconeogenesis(GO:0045721)
0.1 0.2 GO:0034316 negative regulation of Arp2/3 complex-mediated actin nucleation(GO:0034316) actin filament debranching(GO:0071846)
0.1 0.3 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.1 0.5 GO:0009712 catecholamine metabolic process(GO:0006584) catechol-containing compound metabolic process(GO:0009712)
0.1 0.2 GO:0031548 neural plate formation(GO:0021990) brain-derived neurotrophic factor receptor signaling pathway(GO:0031547) regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031548) positive regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031550) anterior neural plate formation(GO:0090017)
0.1 0.2 GO:0070493 thrombin receptor signaling pathway(GO:0070493)
0.1 0.6 GO:0072386 plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.1 0.5 GO:1904292 regulation of ERAD pathway(GO:1904292)
0.1 0.2 GO:0070292 N-acylphosphatidylethanolamine metabolic process(GO:0070292)
0.1 0.4 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.7 GO:0030719 P granule organization(GO:0030719)
0.1 2.4 GO:0006446 regulation of translational initiation(GO:0006446)
0.1 0.4 GO:0000012 single strand break repair(GO:0000012)
0.1 0.8 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.1 0.2 GO:1904396 regulation of neuromuscular junction development(GO:1904396)
0.1 0.5 GO:0001840 neural plate development(GO:0001840)
0.1 0.4 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.1 0.2 GO:0045337 farnesyl diphosphate biosynthetic process(GO:0045337)
0.1 0.3 GO:0006685 sphingomyelin catabolic process(GO:0006685)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.2 GO:0018410 C-terminal protein amino acid modification(GO:0018410)
0.0 0.1 GO:0007250 activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.0 0.4 GO:0007622 rhythmic behavior(GO:0007622) circadian behavior(GO:0048512)
0.0 0.4 GO:0031113 regulation of microtubule polymerization(GO:0031113)
0.0 0.5 GO:0006167 AMP biosynthetic process(GO:0006167) ATP biosynthetic process(GO:0006754)
0.0 1.0 GO:0016075 rRNA catabolic process(GO:0016075)
0.0 0.1 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.2 GO:0042987 beta-amyloid formation(GO:0034205) amyloid precursor protein catabolic process(GO:0042987)
0.0 0.5 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.2 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 0.6 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.0 0.3 GO:0031106 septin ring organization(GO:0031106) septin cytoskeleton organization(GO:0032185)
0.0 0.1 GO:0043046 DNA methylation involved in gamete generation(GO:0043046)
0.0 0.4 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.4 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.2 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.4 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.2 GO:0045955 negative regulation of calcium ion-dependent exocytosis(GO:0045955) negative regulation of regulated secretory pathway(GO:1903306)
0.0 0.7 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.2 GO:0006390 transcription from mitochondrial promoter(GO:0006390)
0.0 0.3 GO:0046548 retinal rod cell development(GO:0046548)
0.0 1.6 GO:0009950 dorsal/ventral axis specification(GO:0009950)
0.0 0.4 GO:0010738 regulation of protein kinase A signaling(GO:0010738)
0.0 0.1 GO:0009186 purine deoxyribonucleotide metabolic process(GO:0009151) purine deoxyribonucleotide catabolic process(GO:0009155) deoxyribonucleoside diphosphate metabolic process(GO:0009186)
0.0 0.2 GO:0070212 protein poly-ADP-ribosylation(GO:0070212)
0.0 0.2 GO:0099517 anterograde synaptic vesicle transport(GO:0048490) synaptic vesicle cytoskeletal transport(GO:0099514) synaptic vesicle transport along microtubule(GO:0099517)
0.0 0.1 GO:0033572 ferric iron transport(GO:0015682) transferrin transport(GO:0033572) trivalent inorganic cation transport(GO:0072512)
0.0 0.2 GO:2000401 regulation of lymphocyte migration(GO:2000401)
0.0 0.2 GO:0000022 mitotic spindle elongation(GO:0000022) spindle elongation(GO:0051231) mitotic spindle midzone assembly(GO:0051256)
0.0 0.7 GO:0007568 aging(GO:0007568)
0.0 0.4 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.3 GO:0098734 protein depalmitoylation(GO:0002084) macromolecule depalmitoylation(GO:0098734)
0.0 0.2 GO:0033505 floor plate formation(GO:0021508) floor plate morphogenesis(GO:0033505)
0.0 0.3 GO:0021684 cerebellar granular layer development(GO:0021681) cerebellar granular layer morphogenesis(GO:0021683) cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.0 2.0 GO:0021782 glial cell development(GO:0021782)
0.0 2.0 GO:0007492 endoderm development(GO:0007492)
0.0 0.2 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.0 0.4 GO:0016114 terpenoid biosynthetic process(GO:0016114)
0.0 0.4 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0 0.3 GO:0071156 regulation of cell cycle arrest(GO:0071156)
0.0 0.1 GO:0045329 carnitine biosynthetic process(GO:0045329)
0.0 0.4 GO:0042407 cristae formation(GO:0042407)
0.0 0.2 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.0 0.3 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.5 GO:0039021 pronephric glomerulus development(GO:0039021)
0.0 0.7 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.0 0.1 GO:0045950 protection from non-homologous end joining at telomere(GO:0031848) telomere maintenance in response to DNA damage(GO:0043247) negative regulation of mitotic recombination(GO:0045950)
0.0 0.3 GO:0009409 response to cold(GO:0009409)
0.0 0.3 GO:0021884 forebrain neuron development(GO:0021884)
0.0 0.2 GO:2000300 regulation of synaptic vesicle exocytosis(GO:2000300)
0.0 0.2 GO:0035269 protein O-linked mannosylation(GO:0035269)
0.0 1.1 GO:0006096 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757)
0.0 0.5 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.3 GO:0060541 respiratory system development(GO:0060541)
0.0 1.5 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0001773 myeloid dendritic cell activation(GO:0001773) myeloid dendritic cell differentiation(GO:0043011) dendritic cell differentiation(GO:0097028)
0.0 0.9 GO:0008589 regulation of smoothened signaling pathway(GO:0008589)
0.0 0.2 GO:0060021 palate development(GO:0060021)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0070262 peptidyl-serine dephosphorylation(GO:0070262)
0.0 0.9 GO:0097191 extrinsic apoptotic signaling pathway(GO:0097191)
0.0 0.1 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.2 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.6 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.7 GO:0051260 protein homooligomerization(GO:0051260)
0.0 3.2 GO:0032259 methylation(GO:0032259)
0.0 0.2 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.3 GO:0097352 autophagosome maturation(GO:0097352)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.7 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.5 GO:0000281 mitotic cytokinesis(GO:0000281)
0.0 0.4 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.1 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:0035108 limb morphogenesis(GO:0035108)
0.0 0.2 GO:0008214 protein demethylation(GO:0006482) protein dealkylation(GO:0008214)
0.0 0.2 GO:0048264 determination of ventral identity(GO:0048264)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0033391 chromatoid body(GO:0033391)
0.2 0.7 GO:0043291 RAVE complex(GO:0043291)
0.2 1.4 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 0.8 GO:0000814 ESCRT II complex(GO:0000814)
0.1 0.5 GO:1902636 kinociliary basal body(GO:1902636)
0.1 0.5 GO:1990130 Iml1 complex(GO:1990130)
0.1 0.3 GO:0061574 ASAP complex(GO:0061574)
0.1 0.4 GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.1 1.4 GO:0031332 RISC complex(GO:0016442) RNAi effector complex(GO:0031332)
0.1 2.3 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 0.5 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 0.6 GO:0030893 meiotic cohesin complex(GO:0030893)
0.1 0.5 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.1 1.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 0.4 GO:0031415 NatA complex(GO:0031415)
0.1 3.0 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 0.8 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.1 0.8 GO:0000815 ESCRT III complex(GO:0000815)
0.1 0.2 GO:0098574 cytoplasmic side of lysosomal membrane(GO:0098574)
0.1 0.7 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 0.5 GO:0061700 GATOR2 complex(GO:0061700)
0.1 1.0 GO:0000176 nuclear exosome (RNase complex)(GO:0000176) cytoplasmic exosome (RNase complex)(GO:0000177)
0.1 0.9 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.1 0.7 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.3 GO:0005826 actomyosin contractile ring(GO:0005826)
0.0 0.2 GO:0000235 astral microtubule(GO:0000235) aster(GO:0005818)
0.0 0.3 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.7 GO:0016282 eukaryotic 43S preinitiation complex(GO:0016282)
0.0 0.6 GO:0071141 SMAD protein complex(GO:0071141)
0.0 0.2 GO:0032797 SMN complex(GO:0032797)
0.0 0.3 GO:0044232 organelle membrane contact site(GO:0044232)
0.0 0.4 GO:0060170 ciliary membrane(GO:0060170)
0.0 0.1 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.4 GO:0070775 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0 0.4 GO:0061617 MICOS complex(GO:0061617)
0.0 0.9 GO:0030426 growth cone(GO:0030426)
0.0 1.3 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0031526 brush border membrane(GO:0031526)
0.0 0.1 GO:0005655 nucleolar ribonuclease P complex(GO:0005655)
0.0 0.2 GO:0036449 microtubule minus-end(GO:0036449)
0.0 0.3 GO:0045180 basal cortex(GO:0045180)
0.0 0.2 GO:1990023 mitotic spindle pole(GO:0097431) mitotic spindle midzone(GO:1990023)
0.0 1.4 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.4 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 1.3 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.6 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.2 GO:0031680 G-protein beta/gamma-subunit complex(GO:0031680)
0.0 0.5 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.0 0.2 GO:0031083 BLOC-1 complex(GO:0031083)
0.0 0.1 GO:0070187 telosome(GO:0070187)
0.0 0.3 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.6 GO:0005871 kinesin complex(GO:0005871)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.3 1.0 GO:0035529 NADH pyrophosphatase activity(GO:0035529)
0.2 2.2 GO:0008494 translation activator activity(GO:0008494)
0.2 1.4 GO:0070883 pre-miRNA binding(GO:0070883)
0.2 0.6 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 2.9 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.1 1.4 GO:0051117 ATPase binding(GO:0051117)
0.1 0.6 GO:0009374 biotin binding(GO:0009374)
0.1 0.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.6 GO:0004619 bisphosphoglycerate mutase activity(GO:0004082) phosphoglycerate mutase activity(GO:0004619)
0.1 0.7 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 0.8 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.4 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.1 0.4 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.2 GO:0015057 thrombin receptor activity(GO:0015057)
0.1 0.4 GO:0051920 peroxiredoxin activity(GO:0051920)
0.1 0.5 GO:0061665 SUMO ligase activity(GO:0061665)
0.1 0.2 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.4 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 1.9 GO:0019003 GDP binding(GO:0019003)
0.1 0.5 GO:0070728 leucine binding(GO:0070728)
0.1 0.4 GO:1901612 cardiolipin binding(GO:1901612)
0.1 0.4 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.2 GO:0008061 chitin binding(GO:0008061)
0.1 2.1 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.1 0.5 GO:1904047 S-adenosyl-L-methionine binding(GO:1904047)
0.1 0.4 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.6 GO:0031078 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 0.3 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.3 GO:0015129 lactate transmembrane transporter activity(GO:0015129)
0.0 0.4 GO:0004596 peptide alpha-N-acetyltransferase activity(GO:0004596)
0.0 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.1 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.0 1.2 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.9 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.4 GO:0010484 H3 histone acetyltransferase activity(GO:0010484) histone acetyltransferase activity (H3-K23 specific)(GO:0043994)
0.0 0.6 GO:0004198 calcium-dependent cysteine-type endopeptidase activity(GO:0004198)
0.0 0.5 GO:0004551 nucleotide diphosphatase activity(GO:0004551)
0.0 0.5 GO:0001540 beta-amyloid binding(GO:0001540)
0.0 0.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.2 GO:0000026 alpha-1,2-mannosyltransferase activity(GO:0000026)
0.0 0.2 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.0 0.1 GO:0043878 aminobutyraldehyde dehydrogenase activity(GO:0019145) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878) 4-trimethylammoniobutyraldehyde dehydrogenase activity(GO:0047105)
0.0 0.2 GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.1 GO:0033204 ribonuclease P RNA binding(GO:0033204)
0.0 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.0 0.2 GO:0008568 microtubule-severing ATPase activity(GO:0008568)
0.0 0.1 GO:0004998 transferrin receptor activity(GO:0004998)
0.0 0.6 GO:0072542 phosphatase activator activity(GO:0019211) protein phosphatase activator activity(GO:0072542)
0.0 0.7 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.4 GO:0002039 p53 binding(GO:0002039)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.4 GO:0016866 intramolecular transferase activity(GO:0016866)
0.0 0.4 GO:0070411 I-SMAD binding(GO:0070411)
0.0 0.2 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.2 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.1 GO:0030296 protein tyrosine kinase activator activity(GO:0030296)
0.0 0.2 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.8 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 1.1 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.0 0.3 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.6 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.2 GO:0050321 tau-protein kinase activity(GO:0050321)
0.0 0.8 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.8 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.3 GO:0008474 palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
0.0 0.1 GO:0050780 dopamine receptor binding(GO:0050780)
0.0 0.1 GO:0003720 telomerase activity(GO:0003720) RNA-directed DNA polymerase activity(GO:0003964) G-rich strand telomeric DNA binding(GO:0098505)
0.0 0.4 GO:0042562 hormone binding(GO:0042562)
0.0 0.2 GO:0004767 sphingomyelin phosphodiesterase activity(GO:0004767)
0.0 0.3 GO:0030165 PDZ domain binding(GO:0030165)
0.0 0.2 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.1 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.2 GO:0008301 DNA binding, bending(GO:0008301)
0.0 1.2 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 1.1 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.2 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 1.3 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.0 GO:0046964 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity(GO:0046964)
0.0 0.2 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.3 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.0 0.2 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.6 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.0 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.9 PID RAS PATHWAY Regulation of Ras family activation
0.1 1.2 PID SYNDECAN 4 PATHWAY Syndecan-4-mediated signaling events
0.1 1.8 PID RAC1 REG PATHWAY Regulation of RAC1 activity
0.1 0.4 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.0 0.4 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor
0.0 0.2 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.0 1.4 PID BCR 5PATHWAY BCR signaling pathway
0.0 0.6 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.0 0.4 PID SMAD2 3PATHWAY Regulation of cytoplasmic and nuclear SMAD2/3 signaling
0.0 0.4 PID IL6 7 PATHWAY IL6-mediated signaling events
0.0 0.3 PID NFAT 3PATHWAY Role of Calcineurin-dependent NFAT signaling in lymphocytes
0.0 0.4 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.5 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.4 PID ATM PATHWAY ATM pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.7 REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion
0.1 2.2 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.1 0.8 REACTOME RNA POL III CHAIN ELONGATION Genes involved in RNA Polymerase III Chain Elongation
0.1 1.4 REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
0.1 0.5 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.1 1.7 REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.1 1.8 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.1 1.4 REACTOME MICRORNA MIRNA BIOGENESIS Genes involved in MicroRNA (miRNA) Biogenesis
0.1 1.8 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 1.2 REACTOME HS GAG BIOSYNTHESIS Genes involved in HS-GAG biosynthesis
0.1 0.7 REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX Genes involved in Formation of transcription-coupled NER (TC-NER) repair complex
0.1 0.4 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.1 0.2 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.1 1.0 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0 0.8 REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING Genes involved in Negative regulators of RIG-I/MDA5 signaling
0.0 0.6 REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION Genes involved in Cyclin A/B1 associated events during G2/M transition
0.0 0.3 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.6 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA
0.0 2.2 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.3 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.0 0.8 REACTOME LYSOSOME VESICLE BIOGENESIS Genes involved in Lysosome Vesicle Biogenesis
0.0 0.3 REACTOME METABOLISM OF PORPHYRINS Genes involved in Metabolism of porphyrins
0.0 0.4 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.2 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.0 0.4 REACTOME SIGNALING BY NODAL Genes involved in Signaling by NODAL
0.0 0.4 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway
0.0 0.4 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 0.2 REACTOME RAF MAP KINASE CASCADE Genes involved in RAF/MAP kinase cascade
0.0 0.2 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation
0.0 0.2 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.0 0.4 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.3 REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE Genes involved in Synthesis of PIPs at the plasma membrane