GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
asnC Links RegulonDB EcoCyc	asnC	AsnC DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
asnC		0.63	9.6e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
asnA Show fit	1.54		asnA Links RegulonDB EcoCyc Show fit	asparagine synthetase A
asnC-mioC Show fit	0.30		mioC Links RegulonDB EcoCyc Show fit asnC Links RegulonDB EcoCyc Show fit	flavoprotein involved in biotin synthesis AsnC DNA-binding transcriptional dual regulator
asnC-mioC-mnmG Show fit	0.15		mioC Links RegulonDB EcoCyc Show fit mnmG Links RegulonDB EcoCyc Show fit asnC Links RegulonDB EcoCyc Show fit	flavoprotein involved in biotin synthesis protein involved in modification of U34 in tRNA AsnC DNA-binding transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	1.5	GO:0006528	asparagine metabolic process(GO:0006528)
0.1	0.3	GO:0043200	response to amino acid(GO:0043200)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.5	GO:0016211	ammonia ligase activity(GO:0016211)
0.0	0.4	GO:0010181	FMN binding(GO:0010181)