GSE55662: Plasticity of transcriptional regulation under antibiotic stress
Gene Symbol | Gene ID | Gene Info |
---|---|---|
crp
|
crp | CRP transcriptional dual regulator |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
crp | 0.19 | 6.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
fur | 4.30 |
fur
|
Fur transcriptional dual regulator |
|
sodB | 1.50 |
sodB
|
superoxide dismutase (Fe) |
|
preTA | 1.41 |
preT
preA
|
NADH-dependent dihydropyrimidine dehydrogenase subunit NADH-dependent dihydropyrimidine dehydrogenase subunit |
|
ompF | 1.17 |
ompF
|
outer membrane porin F |
|
pck | 1.01 |
pck
|
phosphoenolpyruvate carboxykinase (ATP) |
|
raiA | 0.95 |
raiA
|
stationary phase translation inhibitor and ribosome stability factor |
|
mdh | 0.82 |
mdh
|
malate dehydrogenase |
|
glgS | 0.82 |
glgS
|
surface composition regulator |
|
ompW | 0.81 |
ompW
|
outer membrane protein W |
|
ompA | 0.79 |
ompA
|
outer membrane porin A |
|
aspA | 0.74 |
aspA
|
aspartate ammonia-lyase |
|
manXYZ | 0.72 |
manX
manY
manZ
|
mannose PTS permease - ManX subunit mannose PTS permease - ManY subunit mannose PTS permease - ManZ subunit |
|
gatYZABCD | 0.71 |
gatY
gatZ
gatD
gatA
gatB
gatC
|
tagatose-1,6-bisphosphate aldolase 2 subunit GatY tagatose-1,6-bisphosphate aldolase 2 subunit GatZ L-galactitol-1-phosphate 5-dehydrogenase galactitol PTS permease - GatA subunit galactitol PTS permease - GatB subunit galactitol PTS permease - GatC subunit |
|
dcuB-fumB | 0.68 |
fumB
dcuB
|
fumarase B dicarboxylate transporter DcuB |
|
tnaCAB | 0.68 |
tnaA
tnaC
tnaB
|
tryptophanase tryptophanase operon leader peptide tryptophan:H+ symporter TnaB |
|
ansB | 0.68 |
ansB
|
asparaginase II |
|
ychH | 0.61 |
ychH
|
stress-induced protein |
|
ptsHI-crr | 0.61 |
ptsI
ptsH
crr
|
PTS enzyme I HPr Enzyme IIAGlc; Crr |
|
tdcABCDEFG | 0.61 |
tdcE
tdcD
tdcG
tdcF
tdcA
tdcC
tdcB
|
2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive propionate kinase L-serine deaminase III predicted enamine/imine deaminase TdcA DNA-binding transcriptional activator serine / threonine:H+ symporter TdcC catabolic threonine dehydratase |
|
treBC | 0.60 |
treC
treB
|
trehalose-6-phosphate hydrolase trehalose PTS permease - TreB subunit |
|
nupG | 0.59 |
nupG
|
nucleoside:H+ symporter NupG |
|
cyaR | 0.57 |
cyaR
|
CyaR |
|
aspA-dcuA | 0.54 |
aspA
dcuA
|
aspartate ammonia-lyase dicarboxylate transporter DcuA |
|
lpd | 0.51 |
lpd
|
lipoamide dehydrogenase |
|
nmpC | 0.51 |
nmpC
|
outer membrane porin protein; locus of qsr prophage |
|
hupA | 0.48 |
hupA
|
transcriptional dual regulator HU-α (HU-2) |
|
nagE | 0.42 |
nagE
|
N-acetylglucosamine PTS permease |
|
gapA | 0.42 |
gapA
|
glyceraldehyde 3-phosphate dehydrogenase |
|
cspE | 0.41 |
cspE
|
transcription antiterminator and regulator of RNA stability |
|
cspD | 0.40 |
cspD
|
DNA replication inhibitor |
|
rhaSR | 0.40 |
rhaS
rhaR
|
RhaS transcriptional activator RhaR transcriptional activator |
|
grcA | 0.39 |
grcA
|
stress-induced alternate pyruvate formate-lyase subunit |
|
glgCAP | 0.36 |
glgP
glgA
glgC
|
glycogen phosphorylase glycogen synthase glucose-1-phosphate adenylyltransferase |
|
sdhCDAB-sucABCD | 0.35 |
sucA
sucC
sucB
sucD
sdhA
sdhC
sdhB
sdhD
|
subunit of E1(0) component of 2-oxoglutarate dehydrogenase succinyl-CoA synthetase, β subunit dihydrolipoyltranssuccinylase succinyl-CoA synthetase, α subunit succinate:quinone oxidoreductase, FAD binding protein succinate:quinone oxidoreductase, membrane protein SdhC succinate:quinone oxidoreductase, iron-sulfur cluster binding protein succinate:quinone oxidoreductase, membrane protein SdhD |
|
srlAEBD-gutM-srlR-gutQ | 0.33 |
srlB
srlA
srlE
srlD
gutQ
srlR
gutM
|
sorbitol PTS permease - SrlB subunit sorbitol PTS permease - SrlA subunit sorbitol PTS permease - SrlE subunit sorbitol-6-phosphate dehydrogenase D-arabinose 5-phosphate isomerase GutR DNA-binding transcriptional repressor GutM DNA-binding transcriptional activator |
|
gntP | 0.33 |
gntP
|
gluconate / fructuronate transporter GntP |
|
hupB | 0.31 |
hupB
|
transcriptional dual regulator HU-β, NS1 (HU-1) |
|
rpoS | 0.31 |
rpoS
|
RNA polymerase, sigma S (sigma 38) factor |
|
udp | 0.30 |
udp
|
uridine phosphorylase |
|
nanA | 0.29 |
nanA
|
N-acetylneuraminate lyase |
|
secB-gpsA | 0.29 |
gpsA
secB
|
glycerol-3-phosphate dehydrogenase SecB chaperone |
|
ivbL | 0.29 |
ivbL
|
ilvB operon leader peptide |
|
flhDC | 0.29 |
flhC
flhD
|
FlhC transcriptional dual regulator FlhD transcriptional dual regulator |
|
oxyR | 0.27 |
oxyR
|
OxyR DNA-binding transcriptional dual regulator |
|
metK | 0.27 |
metK
|
methionine adenosyltransferase |
|
gntX-nfuA | 0.27 |
gntX
nfuA
|
protein involved in utilization of DNA as a carbon source iron-sulfur cluster scaffold protein |
|
gltBDF | 0.27 |
gltB
gltD
gltF
|
glutamate synthase, large subunit glutamate synthase, small subunit periplasmic protein |
|
nupC | 0.26 |
nupC
|
nucleoside:H+ symporter NupC |
|
fumA | 0.25 |
fumA
|
fumarase A |
|
gntT | 0.24 |
gntT
|
gluconate transporter GntT |
|
glpFKX | 0.24 |
glpF
glpX
glpK
|
glycerol channel GlpF fructose 1,6-bisphosphatase II glycerol kinase |
|
fucPIKUR | 0.24 |
fucU
fucR
fucK
fucP
fucI
|
L-fucose mutarotase FucR transcriptional activator L-fuculokinase fucose:H+ symporter L-fucose isomerase |
|
rbsDACBKR | 0.23 |
rbsK
rbsA
rbsC
rbsB
rbsD
rbsR
|
ribokinase ribose ABC transporter - putative ATP binding subunit ribose ABC transporter - membrane subunit ribose ABC transporter - putative periplasmic binding protein ribose pyranase RbsR DNA-binding transcriptional dual regulator |
|
sdhDAB | 0.23 |
sdhA
sdhB
sdhD
|
succinate:quinone oxidoreductase, FAD binding protein succinate:quinone oxidoreductase, iron-sulfur cluster binding protein succinate:quinone oxidoreductase, membrane protein SdhD |
|
araFGH | 0.23 |
araF
araG
araH
|
arabinose ABC transporter - periplasmic binding protein arabinose ABC transporter - ATP binding subunit arabinose ABC transporter - membrane subunit |
|
cytR | 0.22 |
cytR
|
CytR DNA-binding transcriptional repressor |
|
ycdZ | 0.21 |
ycdZ
|
predicted inner membrane protein |
|
tsx | 0.21 |
tsx
|
nucleoside channel; receptor of phage T6 and colicin K |
|
uxaB | 0.21 |
uxaB
|
altronate oxidoreductase |
|
rpsF-priB-rpsR-rplI | 0.20 |
rpsF
priB
rpsR
rplI
|
30S ribosomal subunit protein S6 primosomal replication protein N 30S ribosomal subunit protein S18 50S ribosomal subunit protein L9 |
|
xylAB | 0.19 |
xylA
xylB
|
xylose isomerase xylulokinase |
|
galETKM | 0.19 |
galT
galE
galM
galK
|
galactose-1-phosphate uridylyltransferase UDP-glucose 4-epimerase galactose-1-epimerase galactokinase |
|
melR | 0.19 |
melR
|
MelR DNA-binding transcriptional dual regulator |
|
agp | 0.18 |
agp
|
glucose-1-phosphatase |
|
yhfA | 0.18 |
yhfA
|
conserved protein |
|
tnaC | 0.18 |
tnaC
|
tryptophanase operon leader peptide |
|
epd-pgk-fbaA | 0.18 |
epd
pgk
fbaA
|
erythrose 4-phosphate dehydrogenase phosphoglycerate kinase fructose bisphosphate aldolase class II |
|
sfsA-dksA | 0.17 |
dksA
sfsA
|
RNA polymerase-binding transcription factor DksA predicted DNA-binding transcriptional regulator of maltose metabolism |
|
spf | 0.17 |
spf
|
Spot42 |
|
ppiA | 0.16 |
ppiA
|
peptidyl-prolyl cis-trans isomerase A (rotamase A) |
|
relA-mazEF | 0.16 |
mazE
relA
mazF
|
MazE antitoxin of the MazF-MazE toxin-antitoxin system GDP pyrophosphokinase/GTP pyrophosphokinase MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity |
|
cstA | 0.16 |
cstA
|
peptide transporter induced by carbon starvation |
|
glpEGR | 0.15 |
glpE
glpG
glpR
|
thiosulfate sulfurtransferase intramembrane serine protease GlpG GlpR DNA-binding transcriptional repressor |
|
sxy | 0.15 |
sxy
|
transcriptional coactivator for CRP |
|
galE | 0.14 |
galE
|
UDP-glucose 4-epimerase |
|
fumC | 0.14 |
fumC
|
fumarase C |
|
idnDOTR | 0.13 |
idnD
idnO
idnR
idnT
|
L-idonate 5-dehydrogenase 5-keto-D-gluconate 5-reductase IdnR transcriptional regulator L-idonate / 5-ketogluconate / gluconate transporter IdnT |
|
murQP | 0.13 |
murP
murQ
|
N-acetylmuramic acid PTS permease / anhydro-N-acetylmuramic acid permease N-acetylmuramic acid 6-phosphate etherase |
|
aaeR | 0.12 |
aaeR
|
quorum sensing transcriptional regulator of LYSR-type |
|
zraSR | 0.12 |
zraS
zraR
|
ZraS sensory histidine kinase ZraR transcriptional activator |
|
acnB | 0.12 |
acnB
|
bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase |
|
yiaJ | 0.12 |
yiaJ
|
YiaJ DNA-binding transcriptional repressor |
|
fucAO | 0.11 |
fucO
fucA
|
L-1,2-propanediol oxidoreductase L-fuculose-phosphate aldolase |
|
malT | 0.11 |
malT
|
MalT transcriptional activator |
|
mlc | 0.10 |
mlc
|
Mlc DNA-binding transcriptional repressor |
|
rplM-rpsI | 0.10 |
rplM
rpsI
|
50S ribosomal subunit protein L13 30S ribosomal subunit protein S9 |
|
gcvTHP | 0.10 |
gcvH
gcvP
gcvT
|
glycine cleavage system H protein glycine decarboxylase aminomethyltransferase |
|
dsdA | 0.10 |
dsdA
|
D-serine ammonia-lyase |
|
galETK | 0.10 |
galT
galE
galK
|
galactose-1-phosphate uridylyltransferase UDP-glucose 4-epimerase galactokinase |
|
exuT | 0.09 |
exuT
|
hexuronate transporter |
|
malXY | 0.08 |
malX
malY
|
MalX PTS permease bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon |
|
pncB | 0.08 |
pncB
|
nicotinate phosphoribosyltransferase |
|
prpR | 0.08 |
prpR
|
PrpR DNA-binding transcriptional dual regulator |
|
aldB | 0.08 |
aldB
|
acetaldehyde dehydrogenase |
|
putP | 0.07 |
putP
|
proline:Na+ symporter |
|
nagBAC-umpH | 0.07 |
nagB
nagC
umpH
nagA
|
glucosamine-6-phosphate deaminase NagC DNA-binding transcriptional dual regulator UMP phosphatase N-acetylglucosamine-6-phosphate deacetylase |
|
epd-pgk | 0.07 |
epd
pgk
|
erythrose 4-phosphate dehydrogenase phosphoglycerate kinase |
|
malK-lamB-malM | 0.06 |
lamB
malM
malK
|
maltose outer membrane porin / phage lambda receptor protein maltose regulon periplasmic protein maltose ABC transporter - ATP binding subunit |
|
ivbL-ilvBN | 0.06 |
ilvB
ilvN
ivbL
|
acetohydroxy acid synthase I, large subunit acetohydroxy acid synthase I, small subunit ilvB operon leader peptide |
|
mtlADR | 0.06 |
mtlR
mtlA
mtlD
|
MtlR DNA-binding transcriptional repressor mannitol PTS permease mannitol-1-phosphate 5-dehydrogenase |
|
grpE | 0.05 |
grpE
|
nucleotide exchange factor |
|
araE | 0.05 |
araE
|
arabinose:H+ symporter |
|
pdhR-aceEF-lpd | 0.05 |
pdhR
lpd
aceF
aceE
|
PdhR DNA-binding transcriptional dual regulator lipoamide dehydrogenase pyruvate dehydrogenase, E2 subunit subunit of E1p component of pyruvate dehydrogenase complex |
|
malI | 0.04 |
malI
|
MalI DNA-binding transcriptional repressor |
|
yaeQ-arfB-nlpE | 0.04 |
arfB
yaeQ
nlpE
|
peptidyl-tRNA hydrolase, ribosome rescue factor conserved protein outer membrane lipoprotein NlpE, involved in surface sensing |
|
focA-pflB | 0.04 |
focA
pflB
|
formate channel FocA pyruvate formate-lyase (inactive) |
|
araC | 0.04 |
araC
|
AraC DNA-binding transcriptional dual regulator |
|
ampDE | 0.04 |
ampD
ampE
|
N-acetyl-anhydromuramyl-L-alanine amidase inner membrane protein |
|
comR | 0.03 |
comR
|
ComR DNA-binding transcriptional repressor |
|
aaeXAB | 0.03 |
aaeA
aaeX
aaeB
|
hydroxylated, aromatic carboxylic acid exporter - putative membrane fusion protein hypothetical protein hydroxylated, aromatic carboxylic acid exporter - putative membrane subunit |
|
hfq-hflXKC | 0.03 |
hflC
hfq
hflK
hflX
|
regulator of FtsH protease RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins regulator of FtsH protease ribosome-dissociating factor, GTPase |
|
patZ | 0.03 |
patZ
|
peptidyl-lysine acetyltransferase |
|
malEFG | 0.03 |
malF
malG
malE
|
maltose ABC transporter - membrane subunit maltose ABC transporter - membrane subunit maltose ABC transporter - periplasmic binding protein |
|
gadE-mdtEF | 0.03 |
mdtF
mdtE
gadE
|
MdtEF-TolC multidrug efflux pump - permease subunit MdtEF-TolC multidrug efflux pump - membrane fusion protein GadE DNA-binding transcriptional activator |
|
galET | 0.02 |
galT
galE
|
galactose-1-phosphate uridylyltransferase UDP-glucose 4-epimerase |
|
dcuR | 0.02 |
dcuR
|
DcuR transcriptional activator |
|
fumAC | 0.02 |
fumA
fumC
|
fumarase A fumarase C |
|
bglGFB | 0.01 |
bglB
bglG
bglF
|
6-phospho-β-glucosidase B; cryptic BglG transcriptional antiterminator BglF |
|
cpdB | 0.01 |
cpdB
|
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase |
|
galS | 0.01 |
galS
|
GalS DNA-binding transcriptional dual regulator |
|
kbaZ-agaVWA | 0.01 |
agaA
agaW
agaV
kbaZ
|
predicted truncated N-acetylgalactosamine-6-phosphate deacetylase N-acetyl-D-galactosamine PTS permease (cryptic) - AgaW subunit (pseudogene) N-acetyl-D-galactosamine PTS permease (cryptic) - AgaV subunit tagatose-1,6-bisphosphate aldolase 1 subunit KbaZ |
|
xylFGHR | 0.01 |
xylH
xylR
xylG
xylF
|
xylose ABC transporter - membrane subunit XylR transcriptional dual regulator xylose ABC transporter - ATP binding subunit xylose ABC transporter - periplasmic binding protein |
|
araE-ygeA | 0.00 |
ygeA
araE
|
predicted racemase arabinose:H+ symporter |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.4 | GO:0006208 | pyrimidine nucleobase catabolic process(GO:0006208) |
0.5 | 1.4 | GO:0000303 | response to superoxide(GO:0000303) superoxide metabolic process(GO:0006801) |
0.4 | 1.1 | GO:0006059 | hexitol metabolic process(GO:0006059) hexitol catabolic process(GO:0019407) |
0.3 | 1.0 | GO:0051828 | entry into host cell(GO:0030260) entry into host(GO:0044409) entry into cell of other organism involved in symbiotic interaction(GO:0051806) entry into other organism involved in symbiotic interaction(GO:0051828) |
0.3 | 1.0 | GO:0006108 | malate metabolic process(GO:0006108) |
0.3 | 1.0 | GO:0015755 | fructose transport(GO:0015755) |
0.3 | 1.4 | GO:0010675 | regulation of cellular carbohydrate metabolic process(GO:0010675) |
0.2 | 1.4 | GO:0006094 | gluconeogenesis(GO:0006094) hexose biosynthetic process(GO:0019319) |
0.2 | 0.9 | GO:0045900 | negative regulation of translational elongation(GO:0045900) |
0.2 | 0.7 | GO:0006528 | asparagine metabolic process(GO:0006528) |
0.2 | 0.7 | GO:0019464 | glycine decarboxylation via glycine cleavage system(GO:0019464) |
0.2 | 0.9 | GO:0090357 | regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238) regulation of tryptophan metabolic process(GO:0090357) |
0.2 | 0.8 | GO:0015858 | nucleoside transport(GO:0015858) |
0.2 | 1.0 | GO:0006567 | threonine catabolic process(GO:0006567) |
0.2 | 0.6 | GO:0046686 | response to cadmium ion(GO:0046686) |
0.2 | 0.6 | GO:0005993 | trehalose catabolic process(GO:0005993) |
0.2 | 2.4 | GO:0006099 | tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101) |
0.2 | 0.3 | GO:0034214 | protein hexamerization(GO:0034214) |
0.1 | 0.4 | GO:0042873 | aldonate transport(GO:0042873) |
0.1 | 0.6 | GO:0009254 | peptidoglycan turnover(GO:0009254) |
0.1 | 1.2 | GO:0006855 | drug transmembrane transport(GO:0006855) |
0.1 | 0.4 | GO:0043242 | negative regulation of protein complex disassembly(GO:0043242) negative regulation of DNA-templated transcription, termination(GO:0060567) |
0.1 | 0.4 | GO:0033499 | galactose catabolic process via UDP-galactose(GO:0033499) |
0.1 | 0.5 | GO:0015750 | pentose transport(GO:0015750) |
0.1 | 0.3 | GO:0043952 | protein transport by the Sec complex(GO:0043952) chaperone-mediated protein transport(GO:0072321) |
0.1 | 0.3 | GO:0046498 | S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498) S-adenosylmethionine metabolic process(GO:0046500) |
0.1 | 0.4 | GO:0005978 | glycogen biosynthetic process(GO:0005978) |
0.1 | 0.1 | GO:0015931 | nucleobase-containing compound transport(GO:0015931) |
0.1 | 0.2 | GO:0046348 | N-acetylneuraminate metabolic process(GO:0006054) N-acetylneuraminate catabolic process(GO:0019262) amino sugar catabolic process(GO:0046348) |
0.1 | 0.2 | GO:0015768 | maltose transport(GO:0015768) |
0.1 | 0.2 | GO:0015969 | guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035) ncRNA catabolic process(GO:0034661) |
0.1 | 0.4 | GO:0009099 | valine biosynthetic process(GO:0009099) |
0.0 | 0.1 | GO:0015976 | carbon utilization(GO:0015976) |
0.0 | 0.1 | GO:0008156 | negative regulation of DNA replication(GO:0008156) negative regulation of DNA metabolic process(GO:0051053) |
0.0 | 0.5 | GO:0006096 | glycolytic process(GO:0006096) |
0.0 | 0.2 | GO:0006276 | plasmid maintenance(GO:0006276) |
0.0 | 0.1 | GO:0046174 | polyol catabolic process(GO:0046174) |
0.0 | 0.1 | GO:0006063 | uronic acid metabolic process(GO:0006063) |
0.0 | 0.1 | GO:0097305 | response to alcohol(GO:0097305) |
0.0 | 0.1 | GO:0010043 | response to zinc ion(GO:0010043) |
0.0 | 0.1 | GO:0009071 | serine family amino acid catabolic process(GO:0009071) |
0.0 | 0.2 | GO:0006352 | DNA-templated transcription, initiation(GO:0006352) |
0.0 | 0.1 | GO:0072344 | rescue of stalled ribosome(GO:0072344) |
0.0 | 0.1 | GO:0030490 | maturation of SSU-rRNA(GO:0030490) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.2 | GO:0046930 | pore complex(GO:0046930) |
0.2 | 0.6 | GO:0045273 | respiratory chain complex II(GO:0045273) plasma membrane respiratory chain complex II(GO:0045274) |
0.2 | 0.5 | GO:0009295 | nucleoid(GO:0009295) |
0.1 | 1.2 | GO:0015935 | small ribosomal subunit(GO:0015935) cytosolic small ribosomal subunit(GO:0022627) |
0.1 | 1.4 | GO:0019898 | extrinsic component of membrane(GO:0019898) |
0.0 | 0.3 | GO:0005618 | cell wall(GO:0005618) |
0.0 | 9.3 | GO:0005829 | cytosol(GO:0005829) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.4 | GO:0004784 | superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721) |
0.3 | 0.3 | GO:0019146 | arabinose-5-phosphate isomerase activity(GO:0019146) |
0.3 | 1.2 | GO:0005469 | succinate:fumarate antiporter activity(GO:0005469) |
0.3 | 1.1 | GO:0003954 | NADH dehydrogenase activity(GO:0003954) |
0.3 | 1.0 | GO:0008861 | formate C-acetyltransferase activity(GO:0008861) |
0.2 | 1.1 | GO:0005337 | nucleoside transmembrane transporter activity(GO:0005337) nucleobase-containing compound transmembrane transporter activity(GO:0015932) |
0.2 | 2.4 | GO:0015288 | porin activity(GO:0015288) wide pore channel activity(GO:0022829) |
0.2 | 0.6 | GO:0015927 | trehalase activity(GO:0015927) |
0.2 | 0.6 | GO:0000104 | succinate dehydrogenase activity(GO:0000104) |
0.2 | 0.7 | GO:0015128 | gluconate transmembrane transporter activity(GO:0015128) aldonate transmembrane transporter activity(GO:0042879) |
0.2 | 0.7 | GO:0004365 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891) |
0.2 | 0.8 | GO:0016841 | ammonia-lyase activity(GO:0016841) |
0.2 | 0.5 | GO:0043211 | carbohydrate-transporting ATPase activity(GO:0043211) |
0.2 | 1.3 | GO:0030955 | potassium ion binding(GO:0030955) |
0.1 | 0.4 | GO:0050308 | sugar-phosphatase activity(GO:0050308) |
0.1 | 0.4 | GO:0019534 | toxin transporter activity(GO:0019534) |
0.1 | 0.4 | GO:0009011 | starch synthase activity(GO:0009011) |
0.1 | 0.4 | GO:0003978 | UDP-glucose 4-epimerase activity(GO:0003978) |
0.1 | 0.4 | GO:0004333 | fumarate hydratase activity(GO:0004333) |
0.1 | 0.4 | GO:0001070 | RNA binding transcription factor activity(GO:0001070) transcription antitermination factor activity, RNA binding(GO:0001072) |
0.1 | 0.2 | GO:0070181 | small ribosomal subunit rRNA binding(GO:0070181) |
0.1 | 0.3 | GO:0042900 | fucose transmembrane transporter activity(GO:0015150) arabinose transmembrane transporter activity(GO:0042900) |
0.1 | 0.6 | GO:0005509 | calcium ion binding(GO:0005509) |
0.1 | 0.9 | GO:0043024 | ribosomal small subunit binding(GO:0043024) |
0.1 | 0.6 | GO:0008047 | enzyme activator activity(GO:0008047) |
0.1 | 0.6 | GO:0015149 | hexose transmembrane transporter activity(GO:0015149) |
0.1 | 0.2 | GO:0016859 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) cis-trans isomerase activity(GO:0016859) |
0.1 | 0.5 | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor(GO:0016668) |
0.1 | 0.3 | GO:0001000 | bacterial-type RNA polymerase core enzyme binding(GO:0001000) |
0.1 | 5.0 | GO:0008270 | zinc ion binding(GO:0008270) |
0.1 | 0.4 | GO:0003697 | single-stranded DNA binding(GO:0003697) |
0.1 | 0.5 | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811) |
0.1 | 0.2 | GO:0008893 | GTP diphosphokinase activity(GO:0008728) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794) |
0.0 | 0.3 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.0 | 0.1 | GO:0003984 | acetolactate synthase activity(GO:0003984) |
0.0 | 0.2 | GO:0016783 | sulfurtransferase activity(GO:0016783) |
0.0 | 0.1 | GO:0031405 | lipoic acid binding(GO:0031405) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.1 | 0.2 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.6 | REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT | Genes involved in The citric acid (TCA) cycle and respiratory electron transport |
0.1 | 0.2 | REACTOME DEVELOPMENTAL BIOLOGY | Genes involved in Developmental Biology |
0.0 | 0.4 | REACTOME METABOLISM OF CARBOHYDRATES | Genes involved in Metabolism of carbohydrates |
0.0 | 0.1 | REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION | Genes involved in Platelet activation, signaling and aggregation |