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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for CadC

Z-value: 0.47

Transcription factors associated with CadC

Gene Symbol Gene ID Gene Info
cadC
cadC CadC DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
cadC0.911.5e-03Click!

Activity profile of CadC motif

Sorted Z-values of CadC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
cadC 2.57
cadC
CadC DNA-binding transcriptional activator
cadBA 0.52
cadA
cadB
lysine decarboxylase 1
lysine:cadaverine antiporter

Network of associatons between targets according to the STRING database.

First level regulatory network of CadC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0015695 organic cation transport(GO:0015695) L-lysine transmembrane transport(GO:1903401)
0.0 2.6 GO:0045893 positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0015491 L-lysine transmembrane transporter activity(GO:0015189) cation:cation antiporter activity(GO:0015491)