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GSE55662: Plasticity of transcriptional regulation under antibiotic stress
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Results for CsiR
Z-value: 0.45
Transcription factors associated with CsiR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
csiR
|
csiR | CsiR DNA-binding transcriptional repressor |
Activity profile of CsiR motif
Sorted Z-values of CsiR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| csiD-lhgO-gabDTP | 3.13 |
gabD
lhgO
gabP
csiD
gabT
|
succinate-semialdehyde dehydrogenase (NADP+) L-2-hydroxyglutarate oxidase 4-aminobutyrate:H+ symporter predicted protein 4-aminobutyrate aminotransferase |
Network of associatons between targets according to the STRING database.
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.6 | 3.1 | GO:0042450 | ornithine metabolic process(GO:0006591) arginine biosynthetic process via ornithine(GO:0042450) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 3.1 | GO:0004777 | succinate-semialdehyde dehydrogenase (NAD+) activity(GO:0004777) |