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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for DsdC

Z-value: 0.96

Transcription factors associated with DsdC

Gene Symbol Gene ID Gene Info
dsdC
dsdC DsdC DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
dsdC0.976.8e-05Click!

Activity profile of DsdC motif

Sorted Z-values of DsdC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
dsdC 6.84
dsdC
DsdC DNA-binding transcriptional dual regulator
dsdXA 3.32
dsdA
dsdX
D-serine ammonia-lyase
D-serine transporter
dsdA 1.20
dsdA
D-serine ammonia-lyase

Network of associatons between targets according to the STRING database.

First level regulatory network of DsdC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 4.5 GO:0019478 D-amino acid catabolic process(GO:0019478)
0.0 6.8 GO:0097659 transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 3.3 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.3 GO:0042879 gluconate transmembrane transporter activity(GO:0015128) aldonate transmembrane transporter activity(GO:0042879)
0.2 1.2 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 6.8 GO:0043565 sequence-specific DNA binding(GO:0043565)