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GSE55662: Plasticity of transcriptional regulation under antibiotic stress
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Results for FhlA
Z-value: 0.95
Transcription factors associated with FhlA
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
fhlA
|
fhlA | FhlA transcriptional activator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| fhlA | 0.98 | 2.5e-05 | Click! |
Activity profile of FhlA motif
Sorted Z-values of FhlA motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| fdhF | 7.15 |
fdhF
|
formate dehydrogenase H |
|
| hypABCDE | 6.00 |
hypE
hypD
hypA
hypC
hypB
|
hydrogenase maturation protein, carbamoyl dehydratase HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor accessory protein for nickel incorporation into hydrogenase 3 HypC, protein involved in hydrogenase 3 maturation accessory protein for nickel incorporation into hydrogenase isoenzymes |
|
| hypABCDE-fhlA | 5.94 |
fhlA
hypE
hypD
hypA
hypC
hypB
|
FhlA transcriptional activator hydrogenase maturation protein, carbamoyl dehydratase HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor accessory protein for nickel incorporation into hydrogenase 3 HypC, protein involved in hydrogenase 3 maturation accessory protein for nickel incorporation into hydrogenase isoenzymes |
|
| hydN-hypF | 0.94 |
hypF
hydN
|
hydrogenase maturation protein, carbamoyltransferase putative electron transport protein HydN |
Network of associatons between targets according to the STRING database.
First level regulatory network of FhlA
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.0 | 11.9 | GO:0018249 | protein dehydration(GO:0018249) peptidyl-S-carbamoyl-L-cysteine dehydration(GO:0046892) |
| 1.8 | 7.2 | GO:0015942 | formate metabolic process(GO:0015942) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 11.9 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
| 0.0 | 7.2 | GO:0005829 | cytosol(GO:0005829) |
| 0.0 | 0.9 | GO:0005737 | cytoplasm(GO:0005737) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.0 | 11.9 | GO:0070025 | carbon monoxide binding(GO:0070025) |
| 1.2 | 7.2 | GO:0030151 | molybdenum ion binding(GO:0030151) |
| 0.2 | 0.9 | GO:0016743 | carboxyl- or carbamoyltransferase activity(GO:0016743) |