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GSE55662: Plasticity of transcriptional regulation under antibiotic stress
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Results for GlcC
Z-value: 1.12
Transcription factors associated with GlcC
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
glcC
|
glcC | GlcC transcriptional dual regulator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| glcC | 0.93 | 9.5e-04 | Click! |
Activity profile of GlcC motif
Sorted Z-values of GlcC motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| glcC | 14.50 |
glcC
|
GlcC transcriptional dual regulator |
|
| glcDEFGBA | 3.62 |
glcD
glcE
glcF
glcG
glcA
glcB
|
glycolate oxidase, predicted FAD-linked subunit glycolate oxidase, predicted FAD-binding subunit glycolate oxidase, predicted iron-sulfur subunit conserved protein glycolate / lactate:H+ symporter malate synthase G |
Network of associatons between targets according to the STRING database.
First level regulatory network of GlcC
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.7 | 3.6 | GO:0034308 | primary alcohol metabolic process(GO:0034308) glyoxylate metabolic process(GO:0046487) |
| 0.1 | 14.5 | GO:2001141 | regulation of transcription, DNA-templated(GO:0006355) regulation of nucleic acid-templated transcription(GO:1903506) regulation of RNA biosynthetic process(GO:2001141) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 3.6 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 3.6 | GO:0046912 | glycolate transmembrane transporter activity(GO:0043879) transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912) |
| 0.1 | 14.5 | GO:0003677 | DNA binding(GO:0003677) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 3.6 | REACTOME METABOLISM OF CARBOHYDRATES | Genes involved in Metabolism of carbohydrates |