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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for HyfR

Z-value: 0.59

Transcription factors associated with HyfR

Gene Symbol Gene ID Gene Info
hyfR
hyfR HyfR DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hyfR0.995.8e-07Click!

Activity profile of HyfR motif

Sorted Z-values of HyfR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
hyfABCDEFGHIJR-focB 5.41
hyfJ
hyfI
hyfH
hyfC
hyfB
hyfA
hyfG
hyfF
hyfE
hyfD
hyfR
focB
hydrogenase 4 component J, putative protein processing element
hydrogenase 4, small subunit
hydrogenase 4, component H
hydrogenase 4, component C
hydrogenase 4, component B
hydrogenase 4, component A
hydrogenase 4, large subunit
hydrogenase 4, component F
hydrogenase 4, component E
hydrogenase 4, component D
HyfR DNA-binding transcriptional activator
FocB formate FNT transporter

Network of associatons between targets according to the STRING database.

First level regulatory network of HyfR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 5.4 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 5.4 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.4 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)