GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
mcbR Links RegulonDB EcoCyc	mcbR	McbR DNA-binding transcriptional dual regulator

Promoter	Log-likelihood	Transcript	Gene	Gene Info
yciGFE Show fit	4.94		yciG Links RegulonDB EcoCyc Show fit yciF Links RegulonDB EcoCyc Show fit yciE Links RegulonDB EcoCyc Show fit	predicted protein conserved protein conserved protein
yciG Show fit	2.47		yciG Links RegulonDB EcoCyc Show fit	predicted protein
mcbA Show fit	2.05		mcbA Links RegulonDB EcoCyc Show fit	protein involved in colanic acid production

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	7.4	GO:0071978	bacterial-type flagellum-dependent swarming motility(GO:0071978)
0.3	2.1	GO:0009242	colanic acid biosynthetic process(GO:0009242) colanic acid metabolic process(GO:0046377)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	2.1	GO:0098567	periplasmic side of plasma membrane(GO:0098567)