Project

GSE55662: Plasticity of transcriptional regulation under antibiotic stress

Navigation
Downloads

Results for PrpR

Z-value: 0.57

Transcription factors associated with PrpR

Gene Symbol Gene ID Gene Info
prpR
prpR PrpR DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
prpR0.422.9e-01Click!

Activity profile of PrpR motif

Sorted Z-values of PrpR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
prpBCDE 3.11
prpD
prpE
prpB
prpC
2-methylcitrate dehydratase
propionyl-CoA synthetase
2-methylisocitrate lyase
2-methylcitrate synthase
prpR 1.53
prpR
PrpR DNA-binding transcriptional dual regulator

Network of associatons between targets according to the STRING database.

First level regulatory network of PrpR

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.1 GO:0019626 short-chain fatty acid catabolic process(GO:0019626)
0.0 1.5 GO:1903508 positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 1.5 GO:0003700 transcription factor activity, sequence-specific DNA binding(GO:0003700)