GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
sutR Links RegulonDB EcoCyc	sutR	SutR DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
sutR		0.69	5.7e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
cysE Show fit	0.30		cysE Links RegulonDB EcoCyc Show fit	serine acetyltransferase
fliAZ-tcyJ Show fit	0.15		tcyJ Links RegulonDB EcoCyc Show fit fliZ Links RegulonDB EcoCyc Show fit fliA Links RegulonDB EcoCyc Show fit	cystine/cysteine ABC transporter - periplasmic binding protein FliZ DNA-binding transcriptional regulator RNA polymerase, sigma 28 (sigma F) factor
sutR Show fit	0.07		sutR Links RegulonDB EcoCyc Show fit	SutR DNA-binding transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0006535	cysteine biosynthetic process from serine(GO:0006535)
0.1	0.2	GO:1903712	L-cystine transport(GO:0015811) cysteine transmembrane transport(GO:1903712)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0016413	O-acetyltransferase activity(GO:0016413)
0.1	0.2	GO:0033229	core promoter binding(GO:0001047) L-cystine transmembrane transporter activity(GO:0015184) cysteine transmembrane transporter activity(GO:0033229)