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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for XylR

Z-value: 0.29

Transcription factors associated with XylR

Gene Symbol Gene ID Gene Info
xylR
xylR XylR transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
xylR-0.581.3e-01Click!

Activity profile of XylR motif

Sorted Z-values of XylR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
araC 1.82
araC
AraC DNA-binding transcriptional dual regulator
xylAB 0.58
xylA
xylB
xylose isomerase
xylulokinase

Network of associatons between targets according to the STRING database.

First level regulatory network of XylR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.8 GO:0019566 arabinose metabolic process(GO:0019566) arabinose catabolic process(GO:0019568)
0.1 0.6 GO:0019323 pentose catabolic process(GO:0019323)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 GO:0019200 carbohydrate kinase activity(GO:0019200)